BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033913
MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREI
FGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLISCQ

High Scoring Gene Products

Symbol, full name Information P value
ALDH12A1
AT5G62530 		protein from Arabidopsis thaliana 3.5e-43

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033913
        (109 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2154094 - symbol:ALDH12A1 "AT5G62530" species:...   456  3.5e-43   1


>TAIR|locus:2154094 [details] [associations]
            symbol:ALDH12A1 "AT5G62530" species:3702 "Arabidopsis
            thaliana" [GO:0004028 "3-chloroallyl aldehyde dehydrogenase
            activity" evidence=ISS] [GO:0005739 "mitochondrion"
            evidence=ISM;IDA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0003842
            "1-pyrroline-5-carboxylate dehydrogenase activity"
            evidence=IGI;IMP] [GO:0006560 "proline metabolic process"
            evidence=TAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010133
            "proline catabolic process to glutamate" evidence=IMP] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0072593 "reactive
            oxygen species metabolic process" evidence=IMP] [GO:0008270 "zinc
            ion binding" evidence=IDA] [GO:0050897 "cobalt ion binding"
            evidence=IDA] InterPro:IPR015590 InterPro:IPR016160
            InterPro:IPR016161 InterPro:IPR016162 InterPro:IPR016163
            Pfam:PF00171 PROSITE:PS00070 PROSITE:PS00687 UniPathway:UPA00261
            GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            GO:GO:0005759 GO:GO:0009651 GO:GO:0008270 GO:GO:0016620
            Gene3D:3.40.309.10 Gene3D:3.40.605.10 SUPFAM:SSF53720 GO:GO:0050897
            GO:GO:0072593 EMBL:AY039787 EMBL:AB015469 EMBL:AY065072
            EMBL:BT000746 EMBL:BT010391 IPI:IPI00520602 RefSeq:NP_568955.1
            UniGene:At.75205 UniGene:At.9309 ProteinModelPortal:Q8VZC3
            IntAct:Q8VZC3 STRING:Q8VZC3 PaxDb:Q8VZC3 PRIDE:Q8VZC3
            EnsemblPlants:AT5G62530.1 GeneID:836373 KEGG:ath:AT5G62530
            GeneFarm:4315 TAIR:At5g62530 eggNOG:COG4230 HOGENOM:HOG000264826
            InParanoid:Q8VZC3 KO:K00294 OMA:CDQDAYA PhylomeDB:Q8VZC3
            ProtClustDB:CLSN2690065 Genevestigator:Q8VZC3 GermOnline:AT5G62530
            GO:GO:0003842 GO:GO:0010133 Uniprot:Q8VZC3
        Length = 556

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 88/103 (85%), Positives = 97/103 (94%)

Query:     1 MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGN-YELVTRE 59
             MLEHM  LL++PGSKLLFGG+ELKNHSIPSIYGAL+PTAV+VP+EEILKD   YELVT+E
Sbjct:   382 MLEHMENLLQIPGSKLLFGGKELKNHSIPSIYGALEPTAVYVPIEEILKDNKTYELVTKE 441

Query:    60 IFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQ 102
             IFGPFQIVTEYK+DQLPLVL ALERMHAHLTAAVVSNDP+FLQ
Sbjct:   442 IFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFLQ 484


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.139   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      109       109   0.00091  102 3  11 22  0.43    30
                                                     29  0.41    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  514 (55 KB)
  Total size of DFA:  105 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.48u 0.16s 12.64t   Elapsed:  00:00:01
  Total cpu time:  12.48u 0.16s 12.64t   Elapsed:  00:00:01
  Start:  Fri May 10 08:07:12 2013   End:  Fri May 10 08:07:13 2013

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