BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033913
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZC3|AL121_ARATH Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial
OS=Arabidopsis thaliana GN=ALDH12A1 PE=2 SV=1
Length = 556
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/103 (85%), Positives = 97/103 (94%), Gaps = 1/103 (0%)
Query: 1 MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDG-NYELVTRE 59
MLEHM LL++PGSKLLFGG+ELKNHSIPSIYGAL+PTAV+VP+EEILKD YELVT+E
Sbjct: 382 MLEHMENLLQIPGSKLLFGGKELKNHSIPSIYGALEPTAVYVPIEEILKDNKTYELVTKE 441
Query: 60 IFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQ 102
IFGPFQIVTEYK+DQLPLVL ALERMHAHLTAAVVSNDP+FLQ
Sbjct: 442 IFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFLQ 484
>sp|Q40255|ALDH_LINUS Probable aldehyde dehydrogenase OS=Linum usitatissimum GN=FIS1 PE=2
SV=1
Length = 551
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 95/102 (93%)
Query: 1 MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREI 60
ML+H+NKLL++PG+KLLFGG+ L+NH+IPSIYGA+KPTAV+VPLEEILK NYELVT+EI
Sbjct: 378 MLDHLNKLLQIPGAKLLFGGKPLENHTIPSIYGAVKPTAVYVPLEEILKVSNYELVTKEI 437
Query: 61 FGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQ 102
FGPFQ+VTEYK QLP+VL ALERMHAHLTAAVVSND LFLQ
Sbjct: 438 FGPFQVVTEYKNSQLPMVLEALERMHAHLTAAVVSNDQLFLQ 479
>sp|Q8P5D8|BETB_XANCP Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=betB PE=3 SV=1
Length = 490
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 1 MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREI 60
+LEH+ + K G++LLFGGE L++ ++ G +F +++ +V EI
Sbjct: 337 VLEHIEQG-KAEGARLLFGGERLRDGALAQ--GCYVAPTIFSDCTDVMT-----IVREEI 388
Query: 61 FGPFQIVTEYKQDQLPLVLNALERMHAH---LTAAVVSND 97
FGP + Y + A+ R +A L A VV+ D
Sbjct: 389 FGPVLSLLTYDDED-----EAITRANATSYGLAAGVVTPD 423
>sp|Q6GCV9|ALDA_STAAS Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain MSSA476) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q7A1Y7|ALDA_STAAW Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain MW2) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q6GKD8|ALDA_STAAR Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain MRSA252) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q7A825|ALDA_STAAN Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain N315) GN=aldA PE=1 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q99X54|ALDA_STAAM Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=aldA PE=1 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q5HJK3|ALDA_STAAC Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain COL) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q2YV11|ALDA_STAAB Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q2G1J0|ALDA_STAA8 Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain NCTC 8325) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|Q2FK94|ALDA_STAA3 Putative aldehyde dehydrogenase AldA OS=Staphylococcus aureus
(strain USA300) GN=aldA PE=3 SV=1
Length = 495
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQD 73
+++L GG L + + + +PT + VP D +++L EIFGP V + K D
Sbjct: 353 AQILAGGHRLTENGLDKGF-FFEPTLIAVP------DNHHKLAQEEIFGPVLTVIKVKDD 405
Query: 74 Q 74
Q
Sbjct: 406 Q 406
>sp|A8GBX8|BETB_SERP5 Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain
568) GN=betB PE=3 SV=1
Length = 490
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 4 HMNKLL------KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVT 57
HM +L K G++LL GGE + GA VF + + E+V
Sbjct: 333 HMESVLRFIESGKNSGARLLCGGERVTEGEFAK--GAYVAPTVFTDCRDEM-----EIVR 385
Query: 58 REIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSND 97
EIFGP + Y+ ++ +V A + L A VV+ND
Sbjct: 386 EEIFGPVMSILSYQSEE-EVVRRANDTTFG-LAAGVVTND 423
>sp|P24810|YQXG_BACSU Uncharacterized protein YqxG OS=Bacillus subtilis (strain 168)
GN=yqxG PE=4 SV=2
Length = 297
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 33 GALKP-----TAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHA 87
GA KP VP+ I GN EL+T + ++ T+Y QD+L VL + + HA
Sbjct: 17 GAAKPYREGNRDFVVPVASI--SGNSELLTNAVLKATEVYTQYGQDRLGQVLISKVKGHA 74
Query: 88 H 88
+
Sbjct: 75 Y 75
>sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTIGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTIGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTIGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|P46367|ALDH4_YEAST Potassium-activated aldehyde dehydrogenase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ALD4 PE=1 SV=2
Length = 519
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 17/74 (22%)
Query: 4 HMNKLLKV------PGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVT 57
+NK+LK G+ L+ GGE L + +KPT VF ++E ++ +V
Sbjct: 371 QLNKILKYVDIGKNEGATLITGGERLGSKGY-----FIKPT-VFGDVKEDMR-----IVK 419
Query: 58 REIFGPFQIVTEYK 71
EIFGP VT++K
Sbjct: 420 EEIFGPVVTVTKFK 433
>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1
Length = 450
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1
Length = 450
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1
Length = 451
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1
Length = 451
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1
Length = 451
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1
Length = 452
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++PG K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPGDKTVGGGDDAFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLI 93
Query: 68 T 68
+
Sbjct: 94 S 94
>sp|Q6D6E0|BETB_ERWCT Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=betB
PE=3 SV=1
Length = 490
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTE 69
K G+++L GGE + + GA VF + +K +V +EIFGP +
Sbjct: 345 KREGARVLVGGEPMTDGDYAQ--GAYVAPTVFTDCRDDMK-----IVRKEIFGPVMSILT 397
Query: 70 YKQDQLPLVLNALERMHAHLTAAVVSND 97
Y QD+ ++ A + + L A +V+ D
Sbjct: 398 Y-QDEDEVIRRANDSEYG-LAAGIVTRD 423
>sp|Q3K9D8|FADB_PSEPF Fatty acid oxidation complex subunit alpha OS=Pseudomonas
fluorescens (strain Pf0-1) GN=fadB PE=3 SV=1
Length = 715
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 39 AVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLP----LVLNALERMHAHLTA 91
AV P E L+D EL+ R + G F +YK + P L LNA+E+M A TA
Sbjct: 187 AVVAP--EKLQDAALELIKRAVSGEF----DYKAKRQPKLEKLRLNAIEQMMAFETA 237
>sp|B1J2K9|BETB_PSEPW Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619)
GN=betB PE=3 SV=1
Length = 490
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 2 LEHMNKLL------KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYEL 55
+HM +L K G+++L GGE L GA VF + + +
Sbjct: 331 FQHMESVLGYIAKGKQEGARVLCGGERLTEGDFAK--GAFVAPTVFTDCTD-----DMTI 383
Query: 56 VTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSND 97
V EIFGP + Y+ ++ V+ L A V +ND
Sbjct: 384 VKEEIFGPVMSILTYETEE--EVIRRANDTEYGLAAGVCTND 423
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2
SV=1
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain OS=Rattus norvegicus GN=Tuba3a PE=2 SV=1
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P05214|TBA3_MOUSE Tubulin alpha-3 chain OS=Mus musculus GN=Tuba3a PE=1 SV=1
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q32KN8|TBA3_BOVIN Tubulin alpha-3 chain OS=Bos taurus GN=TUBA3 PE=2 SV=1
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q6PEY2|TBA3E_HUMAN Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q13748|TBA3C_HUMAN Tubulin alpha-3C/D chain OS=Homo sapiens GN=TUBA3C PE=1 SV=3
Length = 450
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain OS=Patella vulgata GN=TUB2 PE=2
SV=1
Length = 452
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain OS=Paracentrotus lividus PE=2 SV=1
Length = 452
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q1IG69|BETB_PSEE4 Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain
L48) GN=betB PE=3 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 15/102 (14%)
Query: 2 LEHMNKLL------KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYEL 55
+HM +L K G+++L GGE L GA VF + + +
Sbjct: 331 FQHMESVLSYIAKGKEEGARVLCGGERLTAGDFAK--GAFVAPTVFTDCTD-----DMTI 383
Query: 56 VTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSND 97
V EIFGP + Y+ ++ V+ L A V +ND
Sbjct: 384 VKEEIFGPVMSILSYETEE--EVIRRANDTEYGLAAGVCTND 423
>sp|C6DKY5|BETB_PECCP Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betB PE=3 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTE 69
K G+++L GGE + + GA VF + +K +V EIFGP +
Sbjct: 345 KREGARVLVGGEPMTDEKYAQ--GAFVAPTVFTDCRDDMK-----IVREEIFGPVMSILT 397
Query: 70 YKQDQLPLVLNALERMHAHLTAAVVSND 97
Y Q++ ++ A + + L A VV+ D
Sbjct: 398 Y-QNEDEVIRRANDSEYG-LAAGVVTGD 423
>sp|B0KN18|BETB_PSEPG Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain GB-1)
GN=betB PE=3 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Query: 4 HMNKLL------KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVT 57
HM +L K G+++L GGE L GA VF + + +V
Sbjct: 333 HMENVLSYIAKGKEEGARVLCGGERLTEGEFAK--GAFVAPTVFTDCSD-----DMTIVK 385
Query: 58 REIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSND 97
EIFGP + Y+ ++ V+ L A V +ND
Sbjct: 386 EEIFGPVMSILSYETEE--EVIRRANDTEYGLAAGVCTND 423
>sp|A7FKL5|BETB_YERP3 Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTE 69
K G+ LL GG L ++ +GA VF + + ++V EIFGP +
Sbjct: 345 KREGATLLIGGYSLTEDALA--HGAYVAPTVFTHCRD-----DMQIVREEIFGPVMSILS 397
Query: 70 YKQDQLPLVLNALERMHAHLTAAVVSND 97
Y+ ++ V+ L A VV+ D
Sbjct: 398 YQSEE--EVIRRANDTEYGLAAGVVTQD 423
>sp|P08537|TBA_XENLA Tubulin alpha chain OS=Xenopus laevis GN=tuba PE=2 SV=2
Length = 449
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P36220|TBA_TORMA Tubulin alpha chain OS=Torpedo marmorata PE=2 SV=1
Length = 451
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q2HJ86|TBA1D_BOVIN Tubulin alpha-1D chain OS=Bos taurus GN=TUBA1D PE=1 SV=1
Length = 452
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q6AYZ1|TBA1C_RAT Tubulin alpha-1C chain OS=Rattus norvegicus GN=Tuba1c PE=1 SV=1
Length = 449
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P68373|TBA1C_MOUSE Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1
Length = 449
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q9BQE3|TBA1C_HUMAN Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1
Length = 449
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P68365|TBA1C_CRIGR Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1
Length = 449
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q6P9V9|TBA1B_RAT Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1
Length = 451
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q2XVP4|TBA1B_PIG Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1
Length = 451
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|Q5R1W4|TBA1B_PANTR Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1
Length = 451
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
>sp|P05213|TBA1B_MOUSE Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2
Length = 451
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 10 KVPGSKLLFGGEELKNHSIPSIYGALK--PTAVFVPLEEILKDGNYELVTREIFGPFQIV 67
++P K + GG++ N + S GA K P AVFV LE + D R++F P Q++
Sbjct: 35 QMPSDKTIGGGDDSFN-TFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLI 93
Query: 68 T 68
T
Sbjct: 94 T 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,641,256
Number of Sequences: 539616
Number of extensions: 1616245
Number of successful extensions: 4060
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 4056
Number of HSP's gapped (non-prelim): 94
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)