Query 033913
Match_columns 109
No_of_seqs 122 out of 923
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 07:42:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033913.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/033913hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2450 Aldehyde dehydrogenase 99.9 9.1E-24 2E-28 173.2 7.1 94 2-109 355-448 (501)
2 cd07126 ALDH_F12_P5CDH Delta(1 99.9 8.9E-22 1.9E-26 162.2 11.1 107 2-108 329-435 (489)
3 PRK11241 gabD succinate-semial 99.9 2E-21 4.4E-26 159.3 10.0 93 2-108 341-433 (482)
4 TIGR01780 SSADH succinate-semi 99.9 2.5E-21 5.4E-26 156.8 9.6 93 2-108 313-405 (448)
5 COG1012 PutA NAD-dependent ald 99.8 3.4E-21 7.5E-26 158.1 9.3 91 2-108 328-418 (472)
6 cd07140 ALDH_F1L_FTFDH 10-form 99.8 5.8E-21 1.3E-25 156.7 10.3 95 2-108 343-437 (486)
7 cd07123 ALDH_F4-17_P5CDH Delta 99.8 1.8E-20 3.9E-25 155.0 10.5 95 2-107 370-465 (522)
8 PLN02174 aldehyde dehydrogenas 99.8 1.6E-20 3.6E-25 154.6 9.1 91 2-108 304-394 (484)
9 PLN02419 methylmalonate-semial 99.8 2.5E-20 5.5E-25 156.9 9.9 97 2-108 442-538 (604)
10 TIGR03374 ABALDH 1-pyrroline d 99.8 4E-20 8.7E-25 151.2 9.7 93 2-108 331-424 (472)
11 PRK09457 astD succinylglutamic 99.8 3.9E-20 8.4E-25 151.6 9.3 92 2-108 331-422 (487)
12 PLN02315 aldehyde dehydrogenas 99.8 4.1E-20 8.9E-25 152.6 9.2 90 2-106 352-441 (508)
13 cd07130 ALDH_F7_AASADH NAD+-de 99.8 4.7E-20 1E-24 150.6 9.4 91 2-107 330-420 (474)
14 PLN02766 coniferyl-aldehyde de 99.8 6.2E-20 1.3E-24 151.1 10.1 93 2-108 354-446 (501)
15 PLN02278 succinic semialdehyde 99.8 6.1E-20 1.3E-24 151.0 9.8 92 3-108 356-447 (498)
16 TIGR03216 OH_muco_semi_DH 2-hy 99.8 7.2E-20 1.6E-24 149.6 9.8 98 2-108 335-432 (481)
17 PRK10090 aldehyde dehydrogenas 99.8 7.3E-20 1.6E-24 147.6 9.6 93 2-108 267-359 (409)
18 PLN02466 aldehyde dehydrogenas 99.8 8.5E-20 1.8E-24 151.7 10.1 92 3-108 392-483 (538)
19 PRK09406 gabD1 succinic semial 99.8 7.8E-20 1.7E-24 148.9 9.5 94 2-109 317-410 (457)
20 cd07095 ALDH_SGSD_AstD N-succi 99.8 8.1E-20 1.8E-24 147.8 9.4 92 2-108 293-384 (431)
21 cd07113 ALDH_PADH_NahF Escheri 99.8 9E-20 2E-24 148.9 9.6 93 2-108 336-428 (477)
22 TIGR01236 D1pyr5carbox1 delta- 99.8 1.2E-19 2.6E-24 150.7 10.2 95 2-107 370-466 (533)
23 cd07107 ALDH_PhdK-like Nocardi 99.8 1.2E-19 2.5E-24 147.2 10.0 96 3-108 312-407 (456)
24 TIGR03250 PhnAcAld_DH putative 99.8 8.5E-20 1.8E-24 149.1 9.1 89 3-108 333-421 (472)
25 cd07085 ALDH_F6_MMSDH Methylma 99.8 1.3E-19 2.8E-24 147.9 10.1 97 2-108 330-426 (478)
26 cd07141 ALDH_F1AB_F2_RALDH1 NA 99.8 1.1E-19 2.3E-24 148.5 9.6 93 2-108 341-433 (481)
27 KOG2455 Delta-1-pyrroline-5-ca 99.8 6.7E-20 1.5E-24 149.2 8.3 95 1-106 397-492 (561)
28 cd07116 ALDH_ACDHII-AcoD Ralst 99.8 1.2E-19 2.6E-24 148.2 9.7 95 3-108 336-430 (479)
29 TIGR03240 arg_catab_astD succi 99.8 1E-19 2.3E-24 148.8 9.3 92 2-108 329-420 (484)
30 KOG2451 Aldehyde dehydrogenase 99.8 8E-20 1.7E-24 147.1 8.3 93 3-108 358-450 (503)
31 cd07142 ALDH_F2BC Arabidosis a 99.8 1.6E-19 3.4E-24 147.4 9.6 93 2-108 337-429 (476)
32 cd07133 ALDH_CALDH_CalB Conife 99.8 2.2E-19 4.9E-24 145.3 10.4 95 2-108 291-385 (434)
33 cd07148 ALDH_RL0313 Uncharacte 99.8 1.6E-19 3.4E-24 146.7 9.2 91 2-108 317-407 (455)
34 cd07117 ALDH_StaphAldA1 Unchar 99.8 2.2E-19 4.7E-24 146.9 10.1 97 2-108 330-426 (475)
35 cd07099 ALDH_DDALDH Methylomon 99.8 2E-19 4.4E-24 145.3 9.6 93 2-108 312-404 (453)
36 TIGR02278 PaaN-DH phenylacetic 99.8 1.4E-19 3.1E-24 153.5 9.1 91 2-107 344-435 (663)
37 PRK13968 putative succinate se 99.8 2.1E-19 4.5E-24 146.6 9.6 92 3-108 321-412 (462)
38 cd07101 ALDH_SSADH2_GabD2 Myco 99.8 2.6E-19 5.6E-24 145.1 9.6 93 3-108 312-404 (454)
39 PRK13473 gamma-aminobutyraldeh 99.8 2.3E-19 5E-24 146.1 9.3 93 2-108 332-425 (475)
40 cd07094 ALDH_F21_LactADH-like 99.8 2.7E-19 5.9E-24 144.7 9.3 90 3-109 317-406 (453)
41 PRK13252 betaine aldehyde dehy 99.8 3.2E-19 6.9E-24 146.0 9.7 96 3-108 337-432 (488)
42 cd07559 ALDH_ACDHII_AcoD-like 99.8 3.7E-19 8.1E-24 145.6 10.0 97 2-108 335-431 (480)
43 cd07088 ALDH_LactADH-AldA Esch 99.8 3.3E-19 7.2E-24 144.7 9.6 93 3-108 329-421 (468)
44 TIGR01804 BADH glycine betaine 99.8 4E-19 8.6E-24 144.5 9.8 96 3-108 329-424 (467)
45 cd07100 ALDH_SSADH1_GabD1 Myco 99.8 3.9E-19 8.4E-24 143.4 9.5 92 3-108 291-382 (429)
46 cd07152 ALDH_BenzADH NAD-depen 99.8 3.9E-19 8.4E-24 143.6 9.2 89 3-108 306-394 (443)
47 cd07106 ALDH_AldA-AAD23400 Str 99.8 4.4E-19 9.6E-24 143.4 9.5 92 3-108 308-399 (446)
48 cd07108 ALDH_MGR_2402 Magnetos 99.8 4.4E-19 9.5E-24 143.8 9.5 97 3-108 313-409 (457)
49 cd07097 ALDH_KGSADH-YcbD Bacil 99.8 4.4E-19 9.6E-24 144.6 9.5 95 2-108 330-424 (473)
50 cd07084 ALDH_KGSADH-like ALDH 99.8 5.2E-19 1.1E-23 143.6 9.7 101 2-108 286-390 (442)
51 cd07147 ALDH_F21_RNP123 Aldehy 99.8 4.4E-19 9.6E-24 143.4 9.1 91 2-109 315-405 (452)
52 cd07146 ALDH_PhpJ Streptomyces 99.8 4.4E-19 9.5E-24 144.1 9.0 89 3-108 314-402 (451)
53 cd07128 ALDH_MaoC-N N-terminal 99.8 4.5E-19 9.8E-24 146.8 9.1 99 2-108 344-444 (513)
54 TIGR02299 HpaE 5-carboxymethyl 99.8 7.3E-19 1.6E-23 143.7 10.1 97 3-108 331-429 (488)
55 cd07102 ALDH_EDX86601 Uncharac 99.8 7.6E-19 1.7E-23 141.9 10.1 95 3-108 311-405 (452)
56 cd07089 ALDH_CddD-AldA-like Rh 99.8 6E-19 1.3E-23 143.5 9.5 94 3-108 319-412 (459)
57 PRK11903 aldehyde dehydrogenas 99.8 6E-19 1.3E-23 146.2 9.7 98 2-107 348-446 (521)
58 cd07151 ALDH_HBenzADH NADP+-de 99.8 5.3E-19 1.1E-23 143.8 9.1 89 3-108 327-415 (465)
59 PRK09407 gabD2 succinic semial 99.8 6.8E-19 1.5E-23 145.6 9.9 93 3-108 348-440 (524)
60 cd07086 ALDH_F7_AASADH-like NA 99.8 6.5E-19 1.4E-23 143.9 9.6 94 2-107 331-424 (478)
61 cd07091 ALDH_F1-2_Ald2-like AL 99.8 6.1E-19 1.3E-23 143.7 9.2 93 2-108 337-429 (476)
62 cd07090 ALDH_F9_TMBADH NAD+-de 99.8 7.8E-19 1.7E-23 142.3 9.8 97 3-108 311-407 (457)
63 cd07129 ALDH_KGSADH Alpha-Keto 99.8 7.1E-19 1.5E-23 143.1 9.5 95 2-107 302-398 (454)
64 cd07137 ALDH_F3FHI Plant aldeh 99.8 7.6E-19 1.6E-23 142.4 9.6 90 3-108 294-383 (432)
65 cd07134 ALDH_AlkH-like Pseudom 99.8 8.2E-19 1.8E-23 142.0 9.7 91 3-108 294-384 (433)
66 PLN02467 betaine aldehyde dehy 99.8 8.3E-19 1.8E-23 144.6 9.9 95 2-108 346-440 (503)
67 cd07105 ALDH_SaliADH Salicylal 99.8 8.2E-19 1.8E-23 141.4 9.6 94 2-108 291-384 (432)
68 cd07092 ALDH_ABALDH-YdcW Esche 99.8 8.9E-19 1.9E-23 141.4 9.8 93 2-109 312-404 (450)
69 cd07109 ALDH_AAS00426 Uncharac 99.8 8.5E-19 1.8E-23 142.0 9.6 96 2-108 311-406 (454)
70 PLN00412 NADP-dependent glycer 99.8 6.6E-19 1.4E-23 144.8 9.0 89 3-108 350-438 (496)
71 cd07098 ALDH_F15-22 Aldehyde d 99.8 9.7E-19 2.1E-23 142.0 9.9 97 2-108 318-414 (465)
72 cd07144 ALDH_ALD2-YMR170C Sacc 99.8 8.5E-19 1.8E-23 143.2 9.5 96 2-108 340-435 (484)
73 PF00171 Aldedh: Aldehyde dehy 99.8 4.7E-19 1E-23 143.8 7.9 96 2-108 321-416 (462)
74 cd07139 ALDH_AldA-Rv0768 Mycob 99.8 9.5E-19 2.1E-23 142.3 9.6 95 2-108 331-425 (471)
75 PRK11563 bifunctional aldehyde 99.8 6.1E-19 1.3E-23 149.7 8.8 99 2-108 348-448 (675)
76 cd07145 ALDH_LactADH_F420-Bios 99.8 8.1E-19 1.8E-23 142.2 9.1 90 3-108 319-408 (456)
77 TIGR01722 MMSDH methylmalonic 99.8 1.3E-18 2.7E-23 142.1 10.0 97 2-108 329-425 (477)
78 cd07120 ALDH_PsfA-ACA09737 Pse 99.8 1.1E-18 2.4E-23 142.1 9.6 95 3-108 314-408 (455)
79 cd07150 ALDH_VaniDH_like Pseud 99.8 9.8E-19 2.1E-23 141.2 9.2 89 3-108 315-403 (451)
80 cd07131 ALDH_AldH-CAJ73105 Unc 99.8 1.6E-18 3.5E-23 141.1 10.1 96 3-108 331-426 (478)
81 cd07143 ALDH_AldA_AN0554 Asper 99.8 1.6E-18 3.4E-23 142.0 9.8 92 3-108 341-432 (481)
82 cd07118 ALDH_SNDH Gluconobacte 99.8 1.6E-18 3.4E-23 140.9 9.7 94 2-108 314-407 (454)
83 cd07083 ALDH_P5CDH ALDH subfam 99.8 2.1E-18 4.5E-23 141.8 10.4 94 2-108 355-448 (500)
84 cd07119 ALDH_BADH-GbsA Bacillu 99.8 1.5E-18 3.4E-23 141.5 9.5 96 3-108 330-425 (482)
85 cd07138 ALDH_CddD_SSP0762 Rhod 99.8 1.4E-18 3.1E-23 141.2 9.3 96 2-108 325-420 (466)
86 PTZ00381 aldehyde dehydrogenas 99.8 1.6E-18 3.5E-23 142.8 9.6 88 7-108 301-388 (493)
87 TIGR01237 D1pyr5carbox2 delta- 99.8 1.5E-18 3.3E-23 143.0 9.3 91 3-108 369-459 (511)
88 PLN02203 aldehyde dehydrogenas 99.8 1.7E-18 3.7E-23 142.5 9.5 91 2-108 303-393 (484)
89 cd07115 ALDH_HMSADH_HapE Pseud 99.8 1.9E-18 4.2E-23 139.9 9.6 92 3-108 313-404 (453)
90 cd07112 ALDH_GABALDH-PuuC Esch 99.8 1.9E-18 4.1E-23 140.6 9.6 95 2-108 321-415 (462)
91 PRK09847 gamma-glutamyl-gamma- 99.8 1.8E-18 3.9E-23 142.2 9.3 90 3-108 355-444 (494)
92 cd07110 ALDH_F10_BADH Arabidop 99.8 1.9E-18 4E-23 140.1 9.1 94 3-108 316-409 (456)
93 cd07124 ALDH_PutA-P5CDH-RocA D 99.8 2.3E-18 5E-23 141.8 9.5 93 3-108 368-460 (512)
94 cd07114 ALDH_DhaS Uncharacteri 99.8 3.3E-18 7.2E-23 138.6 9.7 96 3-108 315-410 (457)
95 cd07103 ALDH_F5_SSADH_GabD Mit 99.8 2.9E-18 6.4E-23 138.3 9.4 92 3-108 313-404 (451)
96 cd07104 ALDH_BenzADH-like ALDH 99.8 3.1E-18 6.7E-23 137.4 9.3 89 3-108 295-383 (431)
97 cd07111 ALDH_F16 Aldehyde dehy 99.8 3.6E-18 7.8E-23 140.1 9.4 92 3-108 342-433 (480)
98 KOG2454 Betaine aldehyde dehyd 99.8 4.8E-19 1E-23 143.1 4.1 96 4-109 388-483 (583)
99 cd07136 ALDH_YwdH-P39616 Bacil 99.7 6E-18 1.3E-22 138.0 9.9 88 5-108 290-377 (449)
100 cd07149 ALDH_y4uC Uncharacteri 99.7 4.7E-18 1E-22 137.0 9.2 89 3-108 317-405 (453)
101 PRK03137 1-pyrroline-5-carboxy 99.7 5.1E-18 1.1E-22 140.0 9.3 92 2-108 371-462 (514)
102 cd07135 ALDH_F14-YMR110C Sacch 99.7 7.2E-18 1.6E-22 136.8 9.6 83 12-108 305-387 (436)
103 PRK11904 bifunctional proline 99.7 8.1E-18 1.8E-22 148.5 10.4 94 2-108 882-975 (1038)
104 cd07082 ALDH_F11_NP-GAPDH NADP 99.7 8.7E-18 1.9E-22 136.7 9.5 90 3-108 335-424 (473)
105 TIGR01238 D1pyr5carbox3 delta- 99.7 1.8E-17 3.9E-22 136.7 10.0 96 2-108 358-453 (500)
106 cd07125 ALDH_PutA-P5CDH Delta( 99.7 1.4E-17 3.1E-22 137.5 9.3 91 3-108 366-456 (518)
107 cd07132 ALDH_F3AB Aldehyde deh 99.7 2.4E-17 5.2E-22 133.9 10.1 82 13-108 296-377 (443)
108 cd07093 ALDH_F8_HMSADH Human a 99.7 2.2E-17 4.8E-22 133.5 9.8 96 3-108 313-408 (455)
109 PRK11809 putA trifunctional tr 99.7 7.8E-17 1.7E-21 144.7 10.3 96 2-108 969-1064(1318)
110 PRK11905 bifunctional proline 99.7 8.6E-17 1.9E-21 143.7 10.3 94 2-108 874-967 (1208)
111 cd07087 ALDH_F3-13-14_CALDH-li 99.7 1.2E-16 2.5E-21 129.0 9.7 81 14-108 297-377 (426)
112 cd07078 ALDH NAD(P)+ dependent 99.7 1.9E-16 4E-21 126.7 10.3 93 3-108 292-384 (432)
113 KOG2452 Formyltetrahydrofolate 99.7 4.7E-17 1E-21 134.4 6.3 95 3-109 739-833 (881)
114 cd07079 ALDH_F18-19_ProA-GPR G 99.7 4E-17 8.7E-22 131.4 5.4 76 12-108 278-353 (406)
115 cd07121 ALDH_EutE Ethanolamine 99.7 9.2E-17 2E-21 130.4 7.0 86 13-108 289-379 (429)
116 TIGR02288 PaaN_2 phenylacetic 99.7 2.4E-16 5.2E-21 131.8 9.3 92 5-108 398-493 (551)
117 PRK00197 proA gamma-glutamyl p 99.7 1.3E-16 2.7E-21 128.9 5.7 63 34-108 297-359 (417)
118 cd07127 ALDH_PAD-PaaZ Phenylac 99.7 5.8E-16 1.2E-20 129.4 9.7 94 3-108 396-493 (549)
119 cd07081 ALDH_F20_ACDH_EutE-lik 99.6 5.5E-16 1.2E-20 126.4 6.5 95 3-108 276-381 (439)
120 KOG2456 Aldehyde dehydrogenase 99.6 1.3E-15 2.7E-20 123.4 7.5 88 5-107 294-381 (477)
121 PLN02418 delta-1-pyrroline-5-c 99.6 2.2E-15 4.9E-20 129.1 7.8 82 2-108 563-644 (718)
122 PRK15398 aldehyde dehydrogenas 99.6 4.7E-15 1E-19 121.7 6.7 65 36-108 343-409 (465)
123 TIGR01092 P5CS delta l-pyrroli 99.6 7.5E-15 1.6E-19 125.7 7.8 84 2-108 555-638 (715)
124 TIGR00407 proA gamma-glutamyl 99.4 8.6E-14 1.9E-18 112.4 5.2 54 53-108 298-351 (398)
125 cd07077 ALDH-like NAD(P)+-depe 99.4 1.7E-13 3.6E-18 109.7 6.4 73 12-108 269-345 (397)
126 KOG2453 Aldehyde dehydrogenase 99.4 1.9E-13 4.2E-18 109.3 4.9 88 3-105 352-439 (507)
127 TIGR02518 EutH_ACDH acetaldehy 99.3 3.7E-12 8E-17 105.1 7.3 53 53-108 332-388 (488)
128 cd07122 ALDH_F20_ACDH Coenzyme 99.3 2.2E-12 4.7E-17 105.3 5.4 55 51-108 321-379 (436)
129 cd06534 ALDH-SF NAD(P)+-depend 99.2 1.6E-11 3.5E-16 96.5 5.9 56 51-108 264-319 (367)
130 KOG2449 Methylmalonate semiald 99.2 1E-11 2.2E-16 88.3 2.6 68 33-109 65-132 (157)
131 PRK13805 bifunctional acetalde 99.1 8.1E-11 1.8E-15 102.6 6.4 72 32-108 316-393 (862)
132 COG4230 Delta 1-pyrroline-5-ca 99.1 1E-10 2.2E-15 98.4 5.8 93 2-107 434-526 (769)
133 COG0014 ProA Gamma-glutamyl ph 71.9 5.8 0.00013 33.0 3.9 50 56-107 309-358 (417)
134 PF07368 DUF1487: Protein of u 69.6 12 0.00025 28.5 4.8 80 5-106 74-157 (215)
135 PF03295 Pox_TAA1: Poxvirus tr 61.5 6.1 0.00013 24.5 1.6 39 54-94 7-47 (63)
136 KOG2236 Uncharacterized conser 48.2 9.7 0.00021 32.2 1.2 22 57-80 250-274 (483)
137 PRK13149 H/ACA RNA-protein com 45.0 10 0.00022 23.8 0.7 8 58-65 42-49 (73)
138 COG1127 Ttg2A ABC-type transpo 35.0 27 0.00058 27.4 1.8 44 63-107 172-215 (263)
139 PF05389 MecA: Negative regula 30.8 92 0.002 23.0 4.0 32 62-95 128-160 (220)
140 PRK07229 aconitate hydratase; 26.8 98 0.0021 27.2 4.0 41 59-104 193-234 (646)
141 PF04410 Gar1: Gar1/Naf1 RNA b 26.5 27 0.00059 24.7 0.5 15 58-72 66-83 (154)
142 KOG4165 Gamma-glutamyl phospha 26.4 2.4E+02 0.0051 23.5 5.8 50 56-107 303-352 (433)
143 PRK05478 isopropylmalate isome 25.9 1E+02 0.0022 26.0 3.8 41 59-104 202-243 (466)
144 PF07045 DUF1330: Protein of u 25.8 22 0.00048 21.3 -0.1 23 63-87 39-61 (65)
145 PLN00070 aconitate hydratase 25.3 89 0.0019 28.8 3.6 41 59-104 321-362 (936)
146 TIGR01341 aconitase_1 aconitat 23.9 1E+02 0.0022 28.2 3.7 41 59-104 269-310 (876)
147 PRK12881 acnA aconitate hydrat 22.7 1.1E+02 0.0024 28.0 3.7 41 59-104 286-327 (889)
148 PRK09277 aconitate hydratase; 21.5 1.3E+02 0.0027 27.7 3.8 41 59-104 286-327 (888)
149 PF03795 YCII: YCII-related do 21.3 49 0.0011 20.6 0.9 30 59-91 55-84 (95)
150 PTZ00092 aconitate hydratase-l 21.1 1.2E+02 0.0027 27.8 3.6 41 59-104 289-330 (898)
151 cd01583 IPMI 3-isopropylmalate 20.6 1.6E+02 0.0035 24.2 4.0 41 59-104 166-207 (382)
152 cd01584 AcnA_Mitochondrial Aco 20.5 1.2E+02 0.0027 25.1 3.3 41 59-104 172-213 (412)
No 1
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.89 E-value=9.1e-24 Score=173.19 Aligned_cols=94 Identities=26% Similarity=0.305 Sum_probs=81.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+++|+++++ +|+++++||.+.+ ..|+||.|||+. ++. ++|+|++|||||||++|++|++. ||+|++
T Consensus 355 ~~yi~~~k~-eGa~l~~gG~~~g-----~~Gyfi~Ptv~~-~v~-----~~m~i~~EEIFGPVv~v~~F~t~--eE~i~~ 420 (501)
T KOG2450|consen 355 LGYIESGKK-EGATLLCGGVRLG-----DKGYFIKPTVFT-NVT-----DDMRIAKEEIFGPVVVVLKFKTE--EEVIER 420 (501)
T ss_pred HHHHHHHHh-cCCEEEecCcccC-----CCceEECCeecc-CCC-----hhhhhhHhhccCceEEEEecCcH--HHHHHH
Confidence 678888888 6999999997643 355799999863 322 47999999999999999999976 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
||+++|||+|+|||+|.+++++++...|
T Consensus 421 AN~t~yGLAa~V~t~dl~~a~~va~~l~ 448 (501)
T KOG2450|consen 421 ANNTTYGLAAGVFTKDLDKAHRVANALQ 448 (501)
T ss_pred hcCCcccceeeEeccChHHHHHHHHHhc
Confidence 9999999999999999999999987654
No 2
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=99.87 E-value=8.9e-22 Score=162.15 Aligned_cols=107 Identities=72% Similarity=1.118 Sum_probs=81.1
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++.+|+++++||........+.+++|++|||+.++.+....+++|++++||+||||++|++|++++++|+|++
T Consensus 329 ~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~ 408 (489)
T cd07126 329 LDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEA 408 (489)
T ss_pred HHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHH
Confidence 46788887546999999997532110001113899999854321100124689999999999999999997436999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++++.
T Consensus 409 aN~~~~gL~~~vft~d~~~~~~~~~~~ 435 (489)
T cd07126 409 LERMHAHLTAAVVSNDIRFLQEVLANT 435 (489)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999998875
No 3
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=99.86 E-value=2e-21 Score=159.34 Aligned_cols=93 Identities=19% Similarity=0.237 Sum_probs=77.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||.... ..|+|++|||+... + +++++++||+||||++|++|+|. ||+|++
T Consensus 341 ~~~i~~a~~-~Ga~vl~GG~~~~-----~~g~f~~Ptvl~~v-~-----~~~~i~~eE~FGPVl~v~~~~~~--~eai~~ 406 (482)
T PRK11241 341 EEHIADALE-KGARVVCGGKAHE-----LGGNFFQPTILVDV-P-----ANAKVAKEETFGPLAPLFRFKDE--ADVIAQ 406 (482)
T ss_pred HHHHHHHHh-CCCEEEecCCCCC-----CCCeEEeeEEEECC-C-----CCChhhhCcCcCCEEEEEEeCCH--HHHHHH
Confidence 356777766 6999999996432 13458999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~~~l 433 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVGEAL 433 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHHHHc
Confidence 999999999999999999999998764
No 4
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=99.85 E-value=2.5e-21 Score=156.80 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||.... .+|+|++|||+... ++++++++||+||||++|++|++. +|+|++
T Consensus 313 ~~~i~~a~~-~Ga~il~gg~~~~-----~~g~~~~Ptvl~~~------~~~~~i~~eE~FGPvl~v~~~~~~--~eai~~ 378 (448)
T TIGR01780 313 EKHIADAVE-KGAKVVTGGKRHE-----LGGNFFEPTVLSNV------TQDMLVAKEETFGPLAPVFKFDDE--EEVIAI 378 (448)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCC-----CCCeeEcCEEEecC------CCCChHhhCCCCCceEEEEEECCH--HHHHHH
Confidence 456777766 6999999996432 13458999998532 146899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 379 an~~~~gL~~~vfs~d~~~~~~~~~~l 405 (448)
T TIGR01780 379 ANDTEVGLAAYFFSRDLATIWRVAEAL 405 (448)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999988764
No 5
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=99.85 E-value=3.4e-21 Score=158.06 Aligned_cols=91 Identities=20% Similarity=0.227 Sum_probs=77.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+.+++++++ +|+++++||.. . . |+|++|||+... + ++|++++||+||||++|++|+|. ||||++
T Consensus 328 ~~~i~~a~~-~G~~~~~Gg~~-~-----~-g~~~~PTv~~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--dEAi~l 391 (472)
T COG1012 328 EGYIEDAVA-EGARLLAGGKR-P-----G-GYFVEPTILEGV-T-----PDMRIAREEIFGPVLPVIRFKDE--EEAIEL 391 (472)
T ss_pred HHHHHHHHH-cCCEEEeCCcC-C-----C-CeEECCEEEecC-C-----CCChhhhccccCCceEEEEeCCH--HHHHHH
Confidence 567888877 68899998872 1 1 469999998543 1 56999999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++...
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l 418 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRL 418 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 999999999999999999999988653
No 6
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=99.85 E-value=5.8e-21 Score=156.73 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=78.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||...+. .|.|++|||+... + +++++++||+||||++|++|++.+++|+|++
T Consensus 343 ~~~i~~a~~-~Ga~vl~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~ 410 (486)
T cd07140 343 VEYCERGVK-EGATLVYGGKQVDR-----PGFFFEPTVFTDV-E-----DHMFIAKEESFGPIMIISKFDDGDVDGVLQR 410 (486)
T ss_pred HHHHHHHHH-CCCEEEeCCCCCCC-----CCeeECCEEEeCC-C-----CCChhhhCCCCCCeEEEEEcCCCCHHHHHHH
Confidence 456777766 69999999965321 3358999998532 1 4689999999999999999995346999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++.+.
T Consensus 411 aN~~~~gL~a~vft~d~~~a~~~~~~l 437 (486)
T cd07140 411 ANDTEYGLASGVFTKDINKALYVSDKL 437 (486)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 7
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=99.83 E-value=1.8e-20 Score=154.97 Aligned_cols=95 Identities=21% Similarity=0.286 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+.+|+++++||.... ..|+|++|||+... + +++++++||+||||++|++|++++++|+|++
T Consensus 370 ~~~v~~a~~~~Ga~vl~gg~~~~-----~~g~f~~PTvl~~v-~-----~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~ 438 (522)
T cd07123 370 KGYIDHAKSDPEAEIIAGGKCDD-----SVGYFVEPTVIETT-D-----PKHKLMTEEIFGPVLTVYVYPDSDFEETLEL 438 (522)
T ss_pred HHHHHHHHHCCCCEEEeCCCcCC-----CCCceEcCEEEeCC-C-----CCChhhhcCCCCCeEEEEEeCCCCHHHHHHH
Confidence 45667776633999999986422 13458999998532 1 4689999999999999999997558999999
Q ss_pred HhcCC-CCceEEEecCCHHHHHHHHHh
Q 033913 82 LERMH-AHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 82 an~~~-~gLta~Vfs~d~~~~~~~~~~ 107 (109)
+|+++ |||+++|||+|.+++++++.+
T Consensus 439 aN~~~~~gL~a~Vft~d~~~~~~~~~~ 465 (522)
T cd07123 439 VDTTSPYALTGAIFAQDRKAIREATDA 465 (522)
T ss_pred HhCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 99985 999999999999999999875
No 8
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=99.83 E-value=1.6e-20 Score=154.57 Aligned_cols=91 Identities=14% Similarity=0.228 Sum_probs=75.4
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++ . .|+++++||.... .|.|++|||+... + +++++++||+||||++|++|+|+ ||+|++
T Consensus 304 ~~~i~~a-~-~ga~~~~GG~~~~------~g~~~~PTvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--~eai~~ 367 (484)
T PLN02174 304 SKLLDEK-E-VSDKIVYGGEKDR------ENLKIAPTILLDV-P-----LDSLIMSEEIFGPLLPILTLNNL--EESFDV 367 (484)
T ss_pred HHHHHHH-H-cCCEEEECCCcCC------CCCEEEEEEEecC-C-----CCChhhcCCcCCCeEEEecCCCH--HHHHHH
Confidence 4566765 3 5899999986421 3458999997432 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 368 aN~~~~gLaa~vft~d~~~a~~~~~~l 394 (484)
T PLN02174 368 IRSRPKPLAAYLFTHNKKLKERFAATV 394 (484)
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHcC
Confidence 999999999999999999999998764
No 9
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=99.83 E-value=2.5e-20 Score=156.95 Aligned_cols=97 Identities=15% Similarity=0.161 Sum_probs=77.9
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||....... ...|.|++|||+... + +++.+++||+||||++|++|++. ||||++
T Consensus 442 ~~~i~~A~~-~GAkvl~GG~~~~~~~-~~~G~f~~PTVL~~v-~-----~d~~i~~eEiFGPVl~V~~~~~~--dEAI~l 511 (604)
T PLN02419 442 CRLIQSGVD-DGAKLLLDGRDIVVPG-YEKGNFIGPTILSGV-T-----PDMECYKEEIFGPVLVCMQANSF--DEAISI 511 (604)
T ss_pred HHHHHHHHh-cCCEEEeCCccccCCC-CCCCeEEeeEEEeCC-C-----CCCHHHcCCCcCCEEEEEecCCH--HHHHHH
Confidence 456777766 6999999996421000 023458999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++.+.
T Consensus 512 aN~s~yGLaasVfT~d~~~a~~~a~~l 538 (604)
T PLN02419 512 INKNKYGNGAAIFTSSGAAARKFQMDI 538 (604)
T ss_pred HhCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 10
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=99.82 E-value=4e-20 Score=151.20 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=76.7
Q ss_pred HHHHHHHhcCCC-cEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 2 LEHMNKLLKVPG-SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 2 ~~~v~~~~~~~G-~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
.++++++++ .| +++++||..... .|+|++|||+... + +++++++||+||||++|++|++. ||+|+
T Consensus 331 ~~~i~~a~~-~G~a~v~~gg~~~~~-----~g~~~~Ptvl~~v-~-----~~~~i~~eE~FGPvl~v~~~~~~--~eai~ 396 (472)
T TIGR03374 331 MKAVEEAKA-LGHIKVITGGEKRKG-----NGYYFAPTLLAGA-K-----QDDAIVQKEVFGPVVSITSFDDE--EQVVN 396 (472)
T ss_pred HHHHHHHHH-cCCeEEEeCCccCCC-----CCeEEeeEEEeCC-C-----CCChhhhCCccCceEEEEEECCH--HHHHH
Confidence 456667766 46 799999965321 2358999998532 1 46899999999999999999965 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 81 ALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 81 ~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
++|+++|||+++|||+|..++++++.+.
T Consensus 397 ~an~~~~gL~a~vft~d~~~~~~~~~~l 424 (472)
T TIGR03374 397 WANDSQYGLASSVWTKDVGRAHRLSARL 424 (472)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 9999999999999999999999998764
No 11
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=99.82 E-value=3.9e-20 Score=151.56 Aligned_cols=92 Identities=26% Similarity=0.310 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+++++++++ .|+++++||...+ .+|+|++|||+.++ +++++++||+||||++|++|++. ||+|++
T Consensus 331 ~~~i~~a~~-~Ga~~~~gg~~~~-----~~g~~~~PTvl~v~-------~~~~i~~eE~FGPVl~V~~~~~~--deai~~ 395 (487)
T PRK09457 331 VAAQAQLLA-LGGKSLLEMTQLQ-----AGTGLLTPGIIDVT-------GVAELPDEEYFGPLLQVVRYDDF--DEAIRL 395 (487)
T ss_pred HHHHHHHHH-CCCEEEeCCCccC-----CCCeeEecEEeccC-------CCChHHhCCCcCCeEEEEEeCCH--HHHHHH
Confidence 456667766 5999999886432 13358999997322 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 396 ~N~~~~gL~a~v~t~d~~~~~~~~~~l 422 (487)
T PRK09457 396 ANNTRFGLSAGLLSDDREDYDQFLLEI 422 (487)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 12
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=99.82 E-value=4.1e-20 Score=152.64 Aligned_cols=90 Identities=20% Similarity=0.328 Sum_probs=75.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||...+ ..|+|++|||+.++ +++++++||+||||++|++|++. ||||++
T Consensus 352 ~~~i~~a~~-~Ga~vl~gG~~~~-----~~g~~~~Ptvl~v~-------~~~~i~~eE~FGPVl~V~~~~~~--deai~~ 416 (508)
T PLN02315 352 EKGIEIIKS-QGGKILTGGSAIE-----SEGNFVQPTIVEIS-------PDADVVKEELFGPVLYVMKFKTL--EEAIEI 416 (508)
T ss_pred HHHHHHHHH-CCCEEEECCCcCC-----CCCeEEecEEEecC-------CCChHHhCCCcCCEEEEEEeCCH--HHHHHH
Confidence 356677766 6999999996432 13458999997422 46899999999999999999954 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHH
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLI 106 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~ 106 (109)
+|+++|||+++|||+|.+++++++.
T Consensus 417 aN~~~~gL~a~Vft~d~~~a~~~~~ 441 (508)
T PLN02315 417 NNSVPQGLSSSIFTRNPETIFKWIG 441 (508)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHhh
Confidence 9999999999999999999999874
No 13
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=99.82 E-value=4.7e-20 Score=150.56 Aligned_cols=91 Identities=19% Similarity=0.224 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||..... .|.|++|||+..+ +++++++||+||||++|++|++. +|+|++
T Consensus 330 ~~~i~~a~~-~Ga~v~~gg~~~~~-----~g~~~~PTvl~~~-------~~~~i~~eE~FGPvl~v~~~~~~--~eai~~ 394 (474)
T cd07130 330 LAAIEEAKS-QGGTVLFGGKVIDG-----PGNYVEPTIVEGL-------SDAPIVKEETFAPILYVLKFDTL--EEAIAW 394 (474)
T ss_pred HHHHHHHHH-CCCEEEECCCcCCC-----CCeEEccEEEecC-------CCCHHHhCCCcCCeEEEEEeCCH--HHHHHH
Confidence 356777766 69999999975321 2358999998532 22889999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
+|+++|||+++|||+|.++++++++.
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~ 420 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGP 420 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhh
Confidence 99999999999999999999999764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=99.82 E-value=6.2e-20 Score=151.13 Aligned_cols=93 Identities=20% Similarity=0.239 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. .|+++++||..... .|.|++|||+... + +++++++||+||||++|++|+|. ||+|++
T Consensus 354 ~~~i~~a~~-~Ga~v~~gG~~~~~-----~g~~~~PTvl~~v-~-----~~~~i~~eE~FGPVl~v~~~~~~--deai~~ 419 (501)
T PLN02766 354 LSYIEHGKR-EGATLLTGGKPCGD-----KGYYIEPTIFTDV-T-----EDMKIAQDEIFGPVMSLMKFKTV--EEAIKK 419 (501)
T ss_pred HHHHHHHHh-CCCEEEeCCCcCCC-----CCeEEeeEEEecC-C-----CCChhhhCCccCceEEEEEeCCH--HHHHHH
Confidence 355666655 69999999965321 3358999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 420 aN~~~~GL~a~Vft~d~~~a~~~~~~l 446 (501)
T PLN02766 420 ANNTKYGLAAGIVTKDLDVANTVSRSI 446 (501)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999988754
No 15
>PLN02278 succinic semialdehyde dehydrogenase
Probab=99.82 E-value=6.1e-20 Score=150.96 Aligned_cols=92 Identities=20% Similarity=0.240 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ +|+++++||.... .+|+|+.|||+... . +++++++||+||||++|++|+|. ||+|+++
T Consensus 356 ~~i~~a~~-~Ga~vl~gG~~~~-----~~g~~~~Ptvl~~v-~-----~~~~~~~~E~FGPVl~v~~~~~~--deai~~~ 421 (498)
T PLN02278 356 SHVQDAVS-KGAKVLLGGKRHS-----LGGTFYEPTVLGDV-T-----EDMLIFREEVFGPVAPLTRFKTE--EEAIAIA 421 (498)
T ss_pred HHHHHHHh-CCCEEEeCCccCC-----CCCceEeeEEEecC-C-----CCChhhhCCCcCCEEEEEeeCCH--HHHHHHH
Confidence 45666665 7999999996532 13458999987432 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 422 N~~~~gL~a~vft~d~~~~~~~~~~l 447 (498)
T PLN02278 422 NDTEAGLAAYIFTRDLQRAWRVSEAL 447 (498)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 16
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=99.81 E-value=7.2e-20 Score=149.56 Aligned_cols=98 Identities=18% Similarity=0.141 Sum_probs=77.7
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ .|+++++||.......-...|+|++|||+... + +++++++||+||||++|++|++. +|+|++
T Consensus 335 ~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v-~-----~~~~i~~eE~FgPvl~V~~~~~~--~eai~~ 405 (481)
T TIGR03216 335 LSYYALAVE-EGATVVTGGGVPDFGDALAGGAWVQPTIWTGL-P-----DSARVVTEEIFGPCCHIAPFDSE--EEVIAL 405 (481)
T ss_pred HHHHHHHHH-CCCEEEeCCCcccccccCCCCceEccEEEeCC-C-----CCCHHHhCCCCCceEEEEEeCCH--HHHHHH
Confidence 456676666 69999999964321000123459999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l 432 (481)
T TIGR03216 406 ANDTPYGLAASVWTEDLSRAHRVARQM 432 (481)
T ss_pred HhCCCccceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999998764
No 17
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=99.81 E-value=7.3e-20 Score=147.60 Aligned_cols=93 Identities=14% Similarity=0.242 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||.... +.|.|++|||+... + +++++++||+|||+++|++|++ ++|+|++
T Consensus 267 ~~~i~~a~~-~Ga~~~~gg~~~~-----~~g~~~~Ptvl~~v-~-----~~~~i~~eE~FgPvl~v~~~~~--~~eai~~ 332 (409)
T PRK10090 267 EQKVARAVE-EGARVALGGKAVE-----GKGYYYPPTLLLDV-R-----QEMSIMHEETFGPVLPVVAFDT--LEEAIAM 332 (409)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCC-----CCCeEEecEEEeCC-C-----CCCHHHhCCCCCceEEEEEECC--HHHHHHH
Confidence 355666665 6999999996532 13458999997522 1 4689999999999999999995 4999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++...
T Consensus 333 ~n~~~~gL~~~vft~d~~~~~~~~~~l 359 (409)
T PRK10090 333 ANDSDYGLTSSIYTQNLNVAMKAIKGL 359 (409)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 18
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=99.81 E-value=8.5e-20 Score=151.74 Aligned_cols=92 Identities=18% Similarity=0.224 Sum_probs=76.4
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ +|+++++||...+. .|+|+.|||+... + +++++++||+||||++|++|+|. ||+|+++
T Consensus 392 ~~v~~a~~-~Ga~v~~gg~~~~~-----~g~~i~Ptvl~~v-~-----~d~~i~~eE~FGPVl~v~~~~d~--deAi~~a 457 (538)
T PLN02466 392 RYIKSGVE-SGATLECGGDRFGS-----KGYYIQPTVFSNV-Q-----DDMLIAQDEIFGPVQSILKFKDL--DEVIRRA 457 (538)
T ss_pred HHHHHHHH-CCCEEEecCCcCCC-----CceEEEEEEEecC-C-----CCCchhcCCccCcEEEEEEeCCH--HHHHHHH
Confidence 45666655 69999999965321 3458999998532 1 46899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++...
T Consensus 458 N~~~~GL~a~VfT~d~~~a~~~~~~l 483 (538)
T PLN02466 458 NNTRYGLAAGVFTQNLDTANTLSRAL 483 (538)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 19
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.81 E-value=7.8e-20 Score=148.91 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. +|+++++||..... .|+|++|||+... + +++.+++||+|||++.|++|++. +|+|++
T Consensus 317 ~~~i~~a~~-~Ga~~l~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~ 382 (457)
T PRK09406 317 EKQVDDAVA-AGATILCGGKRPDG-----PGWFYPPTVITDI-T-----PDMRLYTEEVFGPVASLYRVADI--DEAIEI 382 (457)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC-----CCceEccEEeecC-C-----CCCHHhhCCCCCceEEEEeeCCH--HHHHHH
Confidence 356666665 69999999965321 3458999997432 1 45899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
+|+++|||+++|||+|.+++.+++.+.+
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~ 410 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLE 410 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCC
Confidence 9999999999999999999999987653
No 20
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=99.81 E-value=8.1e-20 Score=147.77 Aligned_cols=92 Identities=24% Similarity=0.272 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
++++++++. .|+++++||...+. .|.|++|||+.++ +++.+++||+||||++|++|++. +|+|++
T Consensus 293 ~~~v~~a~~-~ga~~l~gg~~~~~-----~g~~~~Ptv~~v~-------~~~~i~~eE~FgPvl~v~~~~~~--~eai~~ 357 (431)
T cd07095 293 LLAQQDLLA-LGGEPLLAMERLVA-----GTAFLSPGIIDVT-------DAADVPDEEIFGPLLQVYRYDDF--DEAIAL 357 (431)
T ss_pred HHHHHHHHh-cCCEEEeCCCcCCC-----CCeEEcCEEEecC-------CCChHHhCCCcCCeEEEEeeCCH--HHHHHH
Confidence 345666666 69999999864321 3458999997422 35899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++.+.
T Consensus 358 ~n~~~~gL~a~v~s~d~~~a~~~~~~l 384 (431)
T cd07095 358 ANATRFGLSAGLLSDDEALFERFLARI 384 (431)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 21
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=99.81 E-value=9e-20 Score=148.85 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||..... .|.|++|||+... + +++.+++||+||||++|++|+|. ||+|++
T Consensus 336 ~~~i~~a~~-~Ga~~l~gg~~~~~-----~g~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~~ 401 (477)
T cd07113 336 CSYLDDARA-EGDEIVRGGEALAG-----EGYFVQPTLVLAR-S-----ADSRLMREETFGPVVSFVPYEDE--EELIQL 401 (477)
T ss_pred HHHHHHHHH-CCCEEEeCCCCCCC-----CCeeEeCEEEecC-C-----CCChHHhCCCCCCeEEEEEeCCH--HHHHHH
Confidence 356666655 69999999964321 2358999997432 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 402 ~n~~~~gL~a~v~t~d~~~~~~~~~~l 428 (477)
T cd07113 402 INDTPFGLTASVWTNNLSKALRYIPRI 428 (477)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999988764
No 22
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=99.81 E-value=1.2e-19 Score=150.67 Aligned_cols=95 Identities=24% Similarity=0.308 Sum_probs=77.0
Q ss_pred HHHHHHHhcCC-CcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 2 LEHMNKLLKVP-GSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 2 ~~~v~~~~~~~-G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
.++++++.++. |+++++||.... ..|.|++|||+... ++++++++||+||||++|++|++++++|+|+
T Consensus 370 ~~~i~~a~~~Ga~a~vl~GG~~~~-----~~G~~~~PTvl~~~------~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~ 438 (533)
T TIGR01236 370 VKYIERAKGDPAELTILYGGKYDD-----SEGYFVEPTVILSK------DPTDPLMVEEIFGPVLTVYVYPDDKYKEILD 438 (533)
T ss_pred HHHHHHHHhcCCceEEEeCCCcCC-----CCCeEEeeEEEecC------CCCChhhcccCCCCeEEEEEeCCCCHHHHHH
Confidence 35667766632 479999986532 13458999998532 1468999999999999999999744799999
Q ss_pred HH-hcCCCCceEEEecCCHHHHHHHHHh
Q 033913 81 AL-ERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 81 ~a-n~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
++ |+++|||+++|||+|.+++.+++++
T Consensus 439 ~~~n~~~~gL~a~Vft~d~~~a~~~~~~ 466 (533)
T TIGR01236 439 VVDSTSRYGLTGAVFAKDRQAILEADKR 466 (533)
T ss_pred HHhcCCCcCceEEEEeCCHHHHHHHHHH
Confidence 99 8999999999999999999999875
No 23
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=99.81 E-value=1.2e-19 Score=147.23 Aligned_cols=96 Identities=19% Similarity=0.213 Sum_probs=76.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||...... ....|.|++|||+... . +++++++||+|||+++|++|++. ||+|+++
T Consensus 312 ~~i~~a~~-~Ga~v~~gG~~~~~~-~~~~g~~~~PTvl~~v-~-----~~~~i~~eE~FGPvl~i~~~~~~--~eai~~~ 381 (456)
T cd07107 312 HYIDSAKR-EGARLVTGGGRPEGP-ALEGGFYVEPTVFADV-T-----PGMRIAREEIFGPVLSVLRWRDE--AEMVAQA 381 (456)
T ss_pred HHHHHHHH-CCCEEEeCCCccccc-cCCCCceECCEEEECC-C-----CCChhhhCCCCCceEEEEeeCCH--HHHHHHH
Confidence 45555555 699999999643210 0123458999997432 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++...
T Consensus 382 n~~~~gL~a~vft~d~~~~~~~~~~l 407 (456)
T cd07107 382 NGVEYGLTAAIWTNDISQAHRTARRV 407 (456)
T ss_pred hCCCCcceEEEECCCHHHHHHHHHhc
Confidence 99999999999999999999998764
No 24
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=99.81 E-value=8.5e-20 Score=149.08 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=75.4
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||... |+|++|||+... + +++++++||+|||+++|++|+|. +|+++++
T Consensus 333 ~~i~~a~~-~Ga~vl~gg~~~--------g~~~~PTvl~~v-~-----~~~~i~~eE~FGPvl~v~~~~~~--~eai~~a 395 (472)
T TIGR03250 333 ARVNEAIA-QGARLLLGNVRD--------GALYAPTVLDRV-D-----PSMTLVREETFGPVSPVIRFCDI--DDAIRIS 395 (472)
T ss_pred HHHHHHHH-CCCEEEECCCcC--------CEEEcCEEEeCC-C-----CCChHHhCCCcCCeEEEEEeCCH--HHHHHHH
Confidence 55667765 699999998531 258999998532 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l 421 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAEL 421 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHC
Confidence 99999999999999999999998764
No 25
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=99.81 E-value=1.3e-19 Score=147.88 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=77.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||....... ..+|+|++|||+... + +++++++||+||||+.|++|++. ||+|++
T Consensus 330 ~~~i~~a~~-~Ga~~l~gg~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~~ 399 (478)
T cd07085 330 EGLIESGVE-EGAKLVLDGRGVKVPG-YENGNFVGPTILDNV-T-----PDMKIYKEEIFGPVLSIVRVDTL--DEAIAI 399 (478)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCCCc-CCCCeEEcCEEEecC-C-----CCChhhhCcCcCCeEEEEEeCCH--HHHHHH
Confidence 356666666 6999999996422100 023458999997532 1 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.++
T Consensus 400 ~N~~~~gL~a~v~t~d~~~~~~~~~~l 426 (478)
T cd07085 400 INANPYGNGAAIFTRSGAAARKFQREV 426 (478)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 26
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=99.81 E-value=1.1e-19 Score=148.51 Aligned_cols=93 Identities=25% Similarity=0.230 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. +|+++++||..... .|.|++|||+... . +++++++||+||||++|++|++. +|+|++
T Consensus 341 ~~~i~~a~~-~Ga~v~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~ 406 (481)
T cd07141 341 LELIESGKK-EGAKLECGGKRHGD-----KGYFIQPTVFSDV-T-----DDMRIAKEEIFGPVQQIFKFKTI--DEVIER 406 (481)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC-----CCeEEeeEEEecC-C-----CCChhhhccccCCeEEEEeeCCH--HHHHHH
Confidence 345666655 69999999975322 2358999997532 1 46899999999999999999954 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 407 ~n~~~~gLs~~vft~d~~~a~~~~~~l 433 (481)
T cd07141 407 ANNTTYGLAAAVFTKDIDKAITFSNAL 433 (481)
T ss_pred HhCCCccceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999988754
No 27
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=99.81 E-value=6.7e-20 Score=149.15 Aligned_cols=95 Identities=27% Similarity=0.337 Sum_probs=82.3
Q ss_pred CHHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 1 MLEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 1 ~~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
|.+.++.+++.+..++|+||..++. .|+|++|||+.. +||.+++|.|||||||+.|..|+|.+++|+++
T Consensus 397 l~k~le~ak~~~~leiL~GGk~DdS-----~G~FV~PTiv~~------kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~ 465 (561)
T KOG2455|consen 397 LKKVLEHAKKDPELEILAGGKCDDS-----TGYFVEPTIVLS------KDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLK 465 (561)
T ss_pred HHHHHHhhccCccceeeecCcccCC-----CCeeecceEEEc------cCCCcchhhhhccCceeEEEEeccccHHHHHH
Confidence 3467888888889999999998663 567999999864 34778999999999999999999999999999
Q ss_pred HH-hcCCCCceEEEecCCHHHHHHHHH
Q 033913 81 AL-ERMHAHLTAAVVSNDPLFLQLQLI 106 (109)
Q Consensus 81 ~a-n~~~~gLta~Vfs~d~~~~~~~~~ 106 (109)
++ |.++||||++||++|.+.+.+..+
T Consensus 466 lv~~tt~YaLTGaiFaqd~~vv~~a~~ 492 (561)
T KOG2455|consen 466 LVDNTTPYALTGAIFAQDREVVLHALD 492 (561)
T ss_pred HHhcCCcceeccccccccHHHHHHHHH
Confidence 77 668999999999999998876554
No 28
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=99.81 E-value=1.2e-19 Score=148.16 Aligned_cols=95 Identities=22% Similarity=0.167 Sum_probs=76.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ +|+++++||....... ...|+|+.|||+... +++++++||+||||++|++|+|. ||+|+++
T Consensus 336 ~~i~~a~~-~Ga~~~~gg~~~~~~~-~~~g~~~~Ptvl~~~-------~~~~~~~eE~FGPVl~v~~~~~~--~eai~~a 404 (479)
T cd07116 336 SYIDIGKE-EGAEVLTGGERNELGG-LLGGGYYVPTTFKGG-------NKMRIFQEEIFGPVLAVTTFKDE--EEALEIA 404 (479)
T ss_pred HHHHHHHH-CCCEEEeCCCcCCCCC-CCCCeeecCeEEccC-------CCChhhhcCCcCceEEEEEeCCH--HHHHHHH
Confidence 45666665 6999999996432100 013458999998532 24899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 405 N~~~~gLsa~v~t~d~~~a~~~~~~l 430 (479)
T cd07116 405 NDTLYGLGAGVWTRDGNTAYRMGRGI 430 (479)
T ss_pred hCCcccceEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999998764
No 29
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=99.81 E-value=1e-19 Score=148.84 Aligned_cols=92 Identities=27% Similarity=0.310 Sum_probs=76.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+++++++++ .|+++++||...+. ++.|++|||+.++ +++++++||+||||++|++|++. +|+|++
T Consensus 329 ~~~i~~a~~-~Ga~~~~gg~~~~~-----~~~~i~PTvl~v~-------~~~~i~~eE~FGPVl~v~~~~~~--~eai~~ 393 (484)
T TIGR03240 329 LAAQAKLLA-LGGKSLLAMRQLDP-----GAALLTPGIIDVT-------GVAELPDEEHFGPLLQVIRYDDF--DEAIAI 393 (484)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC-----CCEEEcCEEEccC-------CCCHHHhCCCcCCeEEEEEeCCH--HHHHHH
Confidence 456777776 69999998864321 2358999997422 35889999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 394 ~n~~~~gL~~~v~t~d~~~a~~~~~~l 420 (484)
T TIGR03240 394 ANNTRFGLSAGLLSDDRELYDRFLLEI 420 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 30
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.81 E-value=8e-20 Score=147.07 Aligned_cols=93 Identities=22% Similarity=0.270 Sum_probs=79.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
.|++++.+ +|+++++||..... .+..|++|||+... . ++|-+..||+|||+.+|++|+|+ ||+|++|
T Consensus 358 ~~v~DAvs-Kga~ii~GGk~~~~----lg~~fyePTvl~~V-~-----~~m~~s~eEtFGPla~v~kFdte--eEvi~~A 424 (503)
T KOG2451|consen 358 KHVEDAVS-KGAKIILGGKERSE----LGPTFYEPTVLSNV-T-----QNMLVSSEETFGPLASVFKFDTE--EEVIEWA 424 (503)
T ss_pred HHHHHHHh-cCCeEEeCCeEccc----cCCccccceEeecC-C-----ccceeeccccccccceeeeeCCH--HHHHHHh
Confidence 58889988 79999999985432 12248999997432 1 46888999999999999999988 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++.||++++||+|+.+.+||+...
T Consensus 425 Ndt~vGLAgYvfs~~~s~~~rVae~L 450 (503)
T KOG2451|consen 425 NDTRVGLAGYVFSNNLSRLFRVAEAL 450 (503)
T ss_pred ccCccceeeEEeccCHHHHHHHHHHH
Confidence 99999999999999999999998754
No 31
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=99.80 E-value=1.6e-19 Score=147.38 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||..... .|+|+.|||+... . +++++++||+|||+++|++|++ ++|+|++
T Consensus 337 ~~~v~~a~~-~Ga~v~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~--~~eai~~ 402 (476)
T cd07142 337 LSYIEHGKE-EGATLITGGDRIGS-----KGYYIQPTIFSDV-K-----DDMKIARDEIFGPVQSILKFKT--VDEVIKR 402 (476)
T ss_pred HHHHHHHHh-CCCEEEecCCcCCC-----CCeeEccEEeecC-C-----CCChhhhCCccCceEEEEeeCC--HHHHHHH
Confidence 355666655 69999999975321 2358999987532 1 4689999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 403 ~n~~~~gL~a~vft~d~~~a~~~~~~l 429 (476)
T cd07142 403 ANNSKYGLAAGVFSKNIDTANTLSRAL 429 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 32
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=99.80 E-value=2.2e-19 Score=145.30 Aligned_cols=95 Identities=15% Similarity=0.146 Sum_probs=77.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||..... ...|.|++|||+... . +++++++||+||||++|++|++. ||||++
T Consensus 291 ~~~i~~a~~-~Ga~v~~gg~~~~~---~~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~~--~eai~~ 358 (434)
T cd07133 291 QGLLEDARA-KGARVIELNPAGED---FAATRKLPPTLVLNV-T-----DDMRVMQEEIFGPILPILTYDSL--DEAIDY 358 (434)
T ss_pred HHHHHHHHh-CCCEEEecCCCCcC---CCCCcEEeeEEEeCC-C-----CCCcccccccCCCeeEEEEeCCH--HHHHHH
Confidence 345666655 69999999864321 023459999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 359 ~n~~~~gL~~~v~t~d~~~a~~~~~~l 385 (434)
T cd07133 359 INARPRPLALYYFGEDKAEQDRVLRRT 385 (434)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 33
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.80 E-value=1.6e-19 Score=146.73 Aligned_cols=91 Identities=25% Similarity=0.359 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||.... +.|++|||+.... +++++++||+||||++|++|++. ||+|++
T Consensus 317 ~~~i~~a~~-~Ga~vl~gg~~~~-------~~~~~Ptvl~~~~------~~~~~~~eE~FgPvl~v~~~~~~--deai~~ 380 (455)
T cd07148 317 EEWVNEAVA-AGARLLCGGKRLS-------DTTYAPTVLLDPP------RDAKVSTQEIFGPVVCVYSYDDL--DEAIAQ 380 (455)
T ss_pred HHHHHHHHh-CCCEEEeCCccCC-------CCeEcCEEEeCCC------CCCHHHhCCCcCCeEEEEecCCH--HHHHHH
Confidence 456777766 6999999986532 2489999985331 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++.+++.+.
T Consensus 381 ~n~~~~gL~a~i~t~d~~~~~~~~~~~ 407 (455)
T cd07148 381 ANSLPVAFQAAVFTKDLDVALKAVRRL 407 (455)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHHc
Confidence 999999999999999999999998765
No 34
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=99.80 E-value=2.2e-19 Score=146.88 Aligned_cols=97 Identities=21% Similarity=0.286 Sum_probs=77.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||........ ..|+|++|||+... + +++++++||+||||++|++|+|. ||+|++
T Consensus 330 ~~~v~~a~~-~Ga~v~~gg~~~~~~~~-~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~~--~eai~~ 399 (475)
T cd07117 330 LSYVDIAKE-EGAKILTGGHRLTENGL-DKGFFIEPTLIVNV-T-----NDMRVAQEEIFGPVATVIKFKTE--DEVIDM 399 (475)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCccccC-CCCeEEeeEEeecC-C-----CCChhhhCCCcCCeEEEEEECCH--HHHHHH
Confidence 345566655 69999999965321111 13458999998533 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++...
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l 426 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAV 426 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999988754
No 35
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=99.80 E-value=2e-19 Score=145.29 Aligned_cols=93 Identities=19% Similarity=0.199 Sum_probs=77.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||.... ..|.|++|||+... . +++++++||+||||++|++|++. ||+|++
T Consensus 312 ~~~i~~a~~-~ga~~~~gg~~~~-----~~g~~~~Ptil~~~-~-----~~~~~~~~E~FgPvl~v~~~~~~--~eai~~ 377 (453)
T cd07099 312 RRHVDDAVA-KGAKALTGGARSN-----GGGPFYEPTVLTDV-P-----HDMDVMREETFGPVLPVMPVADE--DEAIAL 377 (453)
T ss_pred HHHHHHHHh-CCCEEEeCCCcCC-----CCCeEEecEEEecC-C-----CCCHHHhCCCcCCeeEEEeeCCH--HHHHHH
Confidence 356666665 6999999986532 12358999998532 1 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l 404 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRL 404 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 36
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=99.80 E-value=1.4e-19 Score=153.52 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=75.4
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCC-ccccceeeeecceEEEEecCCCHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGN-YELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~-~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
.++++++++ +|+++++||.... .|.|++|||+.... ++ +.+++||+||||++|++|+|. +|+|+
T Consensus 344 ~~~i~~a~~-~Ga~vl~GG~~~~------~g~~~~PTvl~~~~------~~~~~i~~eE~FGPVl~V~~~~~~--~eai~ 408 (663)
T TIGR02278 344 EAAVAALLA-AGAEVRLGGPGRL------DGAFFPPTLLLAED------PWAGAVHATEAFGPVATFFPYGDR--AEAAR 408 (663)
T ss_pred HHHHHHHHH-CCCEEEECCCcCC------CCeeEccEEEeeCC------cchhhHHhccccCCeEEEEeeCCH--HHHHH
Confidence 456777776 6999999996422 23589999985321 23 378999999999999999965 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 81 ALERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 81 ~an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
++|+++|||+++|||+|..++++++.+
T Consensus 409 ~aN~~~~gL~a~vft~d~~~~~~~~~~ 435 (663)
T TIGR02278 409 LAARGGGSLVATLATSDPEEARQFILG 435 (663)
T ss_pred HHHcCCCCceEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999998874
No 37
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=99.80 E-value=2.1e-19 Score=146.59 Aligned_cols=92 Identities=21% Similarity=0.290 Sum_probs=76.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
.+++++.. +|+++++||..... .|.|++|||+... + +++.+++||+||||++|++|+|. ||+|+++
T Consensus 321 ~~i~~a~~-~Ga~vl~gg~~~~~-----~g~~~~Ptvl~~v-~-----~~~~~~~eE~FGPVl~v~~~~d~--~eai~~~ 386 (462)
T PRK13968 321 HQVEATLA-EGARLLLGGEKIAG-----AGNYYAPTVLANV-T-----PEMTAFREELFGPVAAITVAKDA--EHALELA 386 (462)
T ss_pred HHHHHHHH-CCCEEEeCCCcCCC-----CceEECCEEEeCC-C-----CCChHHhCCCcCCEEEEEEECCH--HHHHHHH
Confidence 45666666 69999999965321 2358999998532 1 45889999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 387 n~~~~gLs~~v~t~d~~~a~~~~~~l 412 (462)
T PRK13968 387 NDSEFGLSATIFTTDETQARQMAARL 412 (462)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 38
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=99.80 E-value=2.6e-19 Score=145.14 Aligned_cols=93 Identities=19% Similarity=0.195 Sum_probs=75.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ +|+++++||..... .+++|++|||+... + +++.+++||+|||+++|++|++. ||+|+++
T Consensus 312 ~~v~~a~~-~Ga~vl~gg~~~~~----~~~~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 378 (454)
T cd07101 312 AHVDDAVA-KGATVLAGGRARPD----LGPYFYEPTVLTGV-T-----EDMELFAEETFGPVVSIYRVADD--DEAIELA 378 (454)
T ss_pred HHHHHHHH-CCCEEEeCCCCCCC----CCCeEEcCEEEeCC-C-----CCCHHHhCCCCCceEEEEeeCCH--HHHHHHH
Confidence 45666665 69999999864221 13358999997532 1 45899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 379 n~~~~gL~~~i~t~d~~~a~~~~~~l 404 (454)
T cd07101 379 NDTDYGLNASVWTRDGARGRRIAARL 404 (454)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999988764
No 39
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.80 E-value=2.3e-19 Score=146.13 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=76.1
Q ss_pred HHHHHHHhcCCC-cEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 2 LEHMNKLLKVPG-SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 2 ~~~v~~~~~~~G-~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
.++++++.+ .| +++++||..... .|.|++|||+... + +++.+++||+||||++|++|+|. ||+|+
T Consensus 332 ~~~i~~a~~-~G~a~v~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~ 397 (475)
T PRK13473 332 AGFVERAKA-LGHIRVVTGGEAPDG-----KGYYYEPTLLAGA-R-----QDDEIVQREVFGPVVSVTPFDDE--DQAVR 397 (475)
T ss_pred HHHHHHHHH-cCCeEEEECCCcCCC-----CceeEcCEEEecC-C-----CCChhhhCCccCCeEEEeccCCH--HHHHH
Confidence 355666665 57 999999975321 2358999997432 1 45899999999999999999955 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 81 ALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 81 ~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
++|+++|||+++|||+|.+++.+++.+.
T Consensus 398 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l 425 (475)
T PRK13473 398 WANDSDYGLASSVWTRDVGRAHRVSARL 425 (475)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 9999999999999999999999998764
No 40
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=99.79 E-value=2.7e-19 Score=144.70 Aligned_cols=90 Identities=21% Similarity=0.286 Sum_probs=75.0
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||... |.|++|||+... + +++++++||+||||++|++|++ ++|+|+++
T Consensus 317 ~~i~~a~~-~Ga~v~~gg~~~--------g~~~~Ptvl~~~-~-----~~~~i~~~E~FgPvl~v~~~~~--~~eai~~~ 379 (453)
T cd07094 317 RWVEEAVE-AGARLLCGGERD--------GALFKPTVLEDV-P-----RDTKLSTEETFGPVVPIIRYDD--FEEAIRIA 379 (453)
T ss_pred HHHHHHHH-CCCEEEeCccCC--------CeEEeCEEEeCC-C-----CCChhhhCCCcCceEEEEEeCC--HHHHHHHH
Confidence 45566655 699999998532 248999997532 1 4689999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
|+++|||+++|||+|..++++++.+.+
T Consensus 380 n~~~~gL~~~i~t~d~~~a~~~~~~l~ 406 (453)
T cd07094 380 NSTDYGLQAGIFTRDLNVAFKAAEKLE 406 (453)
T ss_pred hCCCCCCeeEEECCCHHHHHHHHHhcC
Confidence 999999999999999999999987653
No 41
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=99.79 E-value=3.2e-19 Score=146.00 Aligned_cols=96 Identities=23% Similarity=0.262 Sum_probs=76.4
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||....... ...|+|++|||+... . +++++++||+||||++|++|++. +|||+++
T Consensus 337 ~~i~~a~~-~Ga~vl~gg~~~~~~~-~~~g~~~~Ptvl~~v-~-----~~~~i~~eE~FgPvl~v~~~~~~--~eai~~~ 406 (488)
T PRK13252 337 GYIEKGKA-EGARLLCGGERLTEGG-FANGAFVAPTVFTDC-T-----DDMTIVREEIFGPVMSVLTFDDE--DEVIARA 406 (488)
T ss_pred HHHHHHHH-CCCEEEeCCccccccc-CCCCeEEccEEeccC-C-----CCChHhhCCCCCceEEEEeeCCH--HHHHHHH
Confidence 45566555 6999999996432110 013458999998532 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 407 n~~~~gL~a~I~t~d~~~~~~~~~~l 432 (488)
T PRK13252 407 NDTEYGLAAGVFTADLSRAHRVIHQL 432 (488)
T ss_pred hCCCCCCeEEEEeCCHHHHHHHHHhc
Confidence 99999999999999999999998764
No 42
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=99.79 E-value=3.7e-19 Score=145.56 Aligned_cols=97 Identities=20% Similarity=0.182 Sum_probs=77.4
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||....... ...|.|++|||+... . +++++++||+||||++|++|+|. +|+|++
T Consensus 335 ~~~i~~a~~-~Ga~v~~gg~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~ 404 (480)
T cd07559 335 LSYVDIGKE-EGAEVLTGGERLTLGG-LDKGYFYEPTLIKGG-N-----NDMRIFQEEIFGPVLAVITFKDE--EEAIAI 404 (480)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCcccc-CCCCcEECeEEEeCC-C-----CCCcHHhcCCcCceEEEEeeCCH--HHHHHH
Confidence 355666665 6999999997532100 113458999998532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++.+.
T Consensus 405 ~n~~~~gL~~~v~t~d~~~a~~~a~~l 431 (480)
T cd07559 405 ANDTEYGLGGGVWTRDINRALRVARGI 431 (480)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999998754
No 43
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=99.79 E-value=3.3e-19 Score=144.70 Aligned_cols=93 Identities=19% Similarity=0.224 Sum_probs=76.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||..... ..|+|++|||+... ++++.+++||+|||+++|++|++. +|+|+++
T Consensus 329 ~~i~~a~~-~ga~vl~gg~~~~~----~~g~~~~Ptvl~~~------~~~~~~~~~E~fgPvl~v~~~~~~--~eai~~~ 395 (468)
T cd07088 329 EMVERAVE-AGATLLTGGKRPEG----EKGYFYEPTVLTNV------RQDMEIVQEEIFGPVLPVVKFSSL--DEAIELA 395 (468)
T ss_pred HHHHHHHH-CCCEEEeCCCCCCC----CCceeEcCEEEecC------CCCCchhhCCCcCCeEEEEecCCH--HHHHHHH
Confidence 45566655 69999999965321 13458999998532 145899999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++++++.+.
T Consensus 396 n~~~~gL~~~v~t~d~~~~~~~~~~l 421 (468)
T cd07088 396 NDSEYGLTSYIYTENLNTAMRATNEL 421 (468)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 44
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=99.79 E-value=4e-19 Score=144.49 Aligned_cols=96 Identities=20% Similarity=0.199 Sum_probs=76.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. .|+++++||........ ..|.|++|||+... + +++++++||+|||+++|++|++. ||+|+++
T Consensus 329 ~~i~~a~~-~Ga~vl~gg~~~~~~~~-~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~~~ 398 (467)
T TIGR01804 329 SYIEKGKE-EGATLACGGKRPEREGL-QNGFFIEPTVFTDC-T-----DDMTIVREEIFGPVMTVLTFSSE--DEVIARA 398 (467)
T ss_pred HHHHHHHH-CCCEEEeCCCccccccC-CCCeEEeeEEEeCC-C-----CCChHHhCCCCCceEEEEecCCH--HHHHHHH
Confidence 45555555 69999999965322111 13458999998532 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++++++.+.
T Consensus 399 n~~~~gLsa~i~t~d~~~~~~~~~~l 424 (467)
T TIGR01804 399 NDTIYGLAAGVFTADLGRAHRVANQL 424 (467)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988754
No 45
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=99.79 E-value=3.9e-19 Score=143.38 Aligned_cols=92 Identities=18% Similarity=0.212 Sum_probs=76.4
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ .|+++++||..... .|.|++|||+... . +++++++||+|||+++|++|+|. ||+|+++
T Consensus 291 ~~i~~a~~-~Ga~~~~gg~~~~~-----~g~~~~Ptv~~~~-~-----~~~~~~~eE~fgPvl~v~~~~~~--~eai~~~ 356 (429)
T cd07100 291 EQVEEAVA-AGATLLLGGKRPDG-----PGAFYPPTVLTDV-T-----PGMPAYDEELFGPVAAVIKVKDE--EEAIALA 356 (429)
T ss_pred HHHHHHHH-CCCEEEeCCCcCCC-----CCeEEcCEEeecC-C-----CCCHHHhCCCCCCeEEEeeeCCH--HHHHHHH
Confidence 45666666 69999999965321 2358999997532 1 45899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++.+++.++
T Consensus 357 n~~~~gl~a~v~t~d~~~~~~~~~~l 382 (429)
T cd07100 357 NDSPFGLGGSVFTTDLERAERVARRL 382 (429)
T ss_pred hCCCcCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998765
No 46
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=99.79 E-value=3.9e-19 Score=143.59 Aligned_cols=89 Identities=20% Similarity=0.175 Sum_probs=74.7
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. +|+++++||... |.|++|||+... + +++++++||+|||+++|++|+|. +|+|+++
T Consensus 306 ~~i~~a~~-~Ga~vl~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 368 (443)
T cd07152 306 AIVDDSVA-AGARLEAGGTYD--------GLFYRPTVLSGV-K-----PGMPAFDEEIFGPVAPVTVFDSD--EEAVALA 368 (443)
T ss_pred HHHHHHHh-CCCEEEeccCcC--------CEEEcCEEEecC-C-----CCChhhhccccCCeEEEEeeCCH--HHHHHHH
Confidence 45556655 699999998631 248999998532 1 45899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 369 n~~~~gL~a~v~t~d~~~a~~~~~~l 394 (443)
T cd07152 369 NDTEYGLSAGIISRDVGRAMALADRL 394 (443)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 47
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=99.79 E-value=4.4e-19 Score=143.36 Aligned_cols=92 Identities=27% Similarity=0.262 Sum_probs=75.6
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++... .|+++++||..... .|.|+.|||+... + +++++++||+||||++|++|++. +|+|+++
T Consensus 308 ~~i~~a~~-~ga~~~~gg~~~~~-----~g~~~~Ptvl~~v-~-----~~~~i~~~E~FgPvl~v~~~~~~--~eai~~~ 373 (446)
T cd07106 308 ELVEDAKA-KGAKVLAGGEPLDG-----PGYFIPPTIVDDP-P-----EGSRIVDEEQFGPVLPVLKYSDE--DEVIARA 373 (446)
T ss_pred HHHHHHHH-CCCEEEeCCCcCCC-----CCeeEcCEEEeCC-C-----CCCHHHhcCccCCeEEEEeeCCH--HHHHHHH
Confidence 45555554 69999999965321 2358999997532 1 46899999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 374 n~~~~gL~~~i~t~d~~~~~~~~~~~ 399 (446)
T cd07106 374 NDSEYGLGASVWSSDLERAEAVARRL 399 (446)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998765
No 48
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=99.79 E-value=4.4e-19 Score=143.76 Aligned_cols=97 Identities=21% Similarity=0.152 Sum_probs=76.4
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+.+|+++++||....... ...|.|++|||+... + +++.+++||+||||++|++|++ +||+|+++
T Consensus 313 ~~i~~a~~~~ga~vl~gG~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~ 383 (457)
T cd07108 313 GYIDLGLSTSGATVLRGGPLPGEGP-LADGFFVQPTIFSGV-D-----NEWRLAREEIFGPVLCAIPWKD--EDEVIAMA 383 (457)
T ss_pred HHHHHHHhCCCCEEEeCCCcCccCC-CCCceEECCEEEecC-C-----CCChhhhcCCCCceEEeecCCC--HHHHHHHH
Confidence 4555554436999999996532100 123458999997532 1 4689999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 384 n~~~~gLs~~vft~d~~~a~~~~~~l 409 (457)
T cd07108 384 NDSHYGLAAYVWTRDLGRALRAAHAL 409 (457)
T ss_pred hCCCcCceeEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999988754
No 49
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=99.79 E-value=4.4e-19 Score=144.55 Aligned_cols=95 Identities=23% Similarity=0.288 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ +|+++++||..... +..|.|++|||+... + +++++++||+|||++.|++|++ ++|+|++
T Consensus 330 ~~~i~~a~~-~Ga~v~~gg~~~~~---~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~ 397 (473)
T cd07097 330 LRYIEIARS-EGAKLVYGGERLKR---PDEGYYLAPALFAGV-T-----NDMRIAREEIFGPVAAVIRVRD--YDEALAI 397 (473)
T ss_pred HHHHHHHHH-CCCEEEeCCccCCC---CCCCeEEeeEEeccC-C-----CCChhhhCCCcCceEEEeccCC--HHHHHHH
Confidence 345666665 69999999965321 113458999997432 1 4589999999999999999995 4999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 398 ~n~~~~gL~~~v~t~d~~~a~~~~~~l 424 (473)
T cd07097 398 ANDTEFGLSAGIVTTSLKHATHFKRRV 424 (473)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 50
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=99.79 E-value=5.2e-19 Score=143.57 Aligned_cols=101 Identities=52% Similarity=0.743 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCC-CcceeeceEEecccchhccCCCc---cccceeeeecceEEEEecCCCHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPS-IYGALKPTAVFVPLEEILKDGNY---ELVTREIFGPFQIVTEYKQDQLPL 77 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~-~~~~v~PTv~~~~~~~~~~~~~~---~~~~eEiFGPv~~v~~y~~~~~eE 77 (109)
.++++++.+..|+++++||........+. .|+|++|||+... + +++ ++++||+||||++|++|+|.+++|
T Consensus 286 ~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~-~-----~~~~~~~i~~eE~FGPvl~v~~~~~~~~~e 359 (442)
T cd07084 286 LAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPI-D-----EILKTYELVTEEIFGPFAIVVEYKKDQLAL 359 (442)
T ss_pred HHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEec-C-----cccccchHHheeccCceEEEEEeCCccHHH
Confidence 35667776633589999996432111111 2458999998532 1 334 899999999999999999733699
Q ss_pred HHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 78 VLNALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 78 ai~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|+++|||+++|||+|.+++++++.++
T Consensus 360 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l 390 (442)
T cd07084 360 VLELLERMHGSLTAAIYSNDPIFLQELIGNL 390 (442)
T ss_pred HHHHHHhCCCCeeEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999998764
No 51
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=99.79 E-value=4.4e-19 Score=143.42 Aligned_cols=91 Identities=25% Similarity=0.259 Sum_probs=76.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. +|+++++||... |+|++|||+... + +++++++||+|||+++|++|++. ||+|++
T Consensus 315 ~~~i~~a~~-~Ga~~l~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~~--deai~~ 377 (452)
T cd07147 315 EGWVNEAVD-AGAKLLTGGKRD--------GALLEPTILEDV-P-----PDMEVNCEEVFGPVVTVEPYDDF--DEALAA 377 (452)
T ss_pred HHHHHHHHH-CCCEEEecCCcC--------CEEEcCEEEeCC-C-----CCChHHhCcCcCCeEEEEEeCCH--HHHHHH
Confidence 356666665 699999998642 248999997532 1 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
+|+++|||+++|||+|.+++.+++.+++
T Consensus 378 ~n~~~~gL~~~v~t~d~~~a~~~~~~~~ 405 (452)
T cd07147 378 VNDSKFGLQAGVFTRDLEKALRAWDELE 405 (452)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHHcC
Confidence 9999999999999999999999988753
No 52
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=99.79 E-value=4.4e-19 Score=144.09 Aligned_cols=89 Identities=21% Similarity=0.256 Sum_probs=75.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||... |+|++|||+... + +++.+++||+|||++.|++|+|. ||+|+++
T Consensus 314 ~~v~~a~~-~Ga~vl~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 376 (451)
T cd07146 314 NRVEEAIA-QGARVLLGNQRQ--------GALYAPTVLDHV-P-----PDAELVTEETFGPVAPVIRVKDL--DEAIAIS 376 (451)
T ss_pred HHHHHHHh-CCCEEEeCCCcC--------CEEEcCEEeecC-C-----CCCHHHhCCCCCCeEEEEEeCCH--HHHHHHH
Confidence 46667766 699999998531 248999997532 1 45889999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++++++.++
T Consensus 377 n~~~~gL~~~i~t~d~~~~~~~~~~l 402 (451)
T cd07146 377 NSTAYGLSSGVCTNDLDTIKRLVERL 402 (451)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHHC
Confidence 99999999999999999999998765
No 53
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=99.78 E-value=4.5e-19 Score=146.78 Aligned_cols=99 Identities=22% Similarity=0.325 Sum_probs=76.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCC--CCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKN--HSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVL 79 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~--~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai 79 (109)
.++++++++ . +++++||..... ..-+..|.|++|||+..... ++++.+++||+||||++|++|++. +|+|
T Consensus 344 ~~~i~~a~~-~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~----~~~~~i~~eE~FGPVl~V~~~~~~--deai 415 (513)
T cd07128 344 RAAVATLLA-E-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDP----DAATAVHDVEAFGPVATLMPYDSL--AEAI 415 (513)
T ss_pred HHHHHHHHh-C-CEEEECCCccccccCCCCCCCEEECCEEEeccCC----cccchHHhCCCcCCeEEEEeeCCH--HHHH
Confidence 456777776 3 899999964210 00012345899999853211 024789999999999999999965 9999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 80 NALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 80 ~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+++|+++|||+++|||+|.+++++++.+.
T Consensus 416 ~~aN~~~~gL~asvft~d~~~~~~~~~~l 444 (513)
T cd07128 416 ELAARGRGSLVASVVTNDPAFARELVLGA 444 (513)
T ss_pred HHHhcCCCCeeEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999998763
No 54
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=99.78 E-value=7.3e-19 Score=143.74 Aligned_cols=97 Identities=20% Similarity=0.228 Sum_probs=76.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCC--CCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNH--SIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~--~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
++++++.. .|+++++||...... .....|+|++|||+... + +++.+++||+|||+++|++|++. +|+|+
T Consensus 331 ~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~~--~eai~ 401 (488)
T TIGR02299 331 GYVEAAEK-EGATILVGGERAPTFRGEDLGRGNYVLPTVFTGA-D-----NHMRIAQEEIFGPVLTVIPFKDE--EEAIE 401 (488)
T ss_pred HHHHHHHh-CCCEEEeCCccCcccccccCCCCeEEccEEEecC-C-----CCCchhhCCCcCCeEEEEeeCCH--HHHHH
Confidence 45566655 699999998653210 00012458999997422 1 46899999999999999999965 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 81 ALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 81 ~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
++|+++|||+++|||+|.+++++++.+.
T Consensus 402 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l 429 (488)
T TIGR02299 402 KANDTRYGLAGYVWTNDVGRAHRVALAL 429 (488)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 9999999999999999999999998764
No 55
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=99.78 E-value=7.6e-19 Score=141.91 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=76.7
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||...... +..|+|++|||+... + +++++++||+||||++|++|+|. ||+|+++
T Consensus 311 ~~i~~a~~-~ga~vl~gg~~~~~~--~~~g~~~~Ptvl~~~-~-----~~~~i~~~E~fgPvl~v~~~~~~--~eai~~~ 379 (452)
T cd07102 311 AQIADAIA-KGARALIDGALFPED--KAGGAYLAPTVLTNV-D-----HSMRVMREETFGPVVGIMKVKSD--AEAIALM 379 (452)
T ss_pred HHHHHHHh-CCCEEEeCCCCCCCC--CCCCceEcCEEEecC-C-----CCChhhhcCCcCCeEEEEEeCCH--HHHHHHH
Confidence 45566665 699999998643210 123458999998532 1 45899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++.+++.+.
T Consensus 380 n~~~~gL~~~i~t~d~~~~~~~~~~l 405 (452)
T cd07102 380 NDSEYGLTASVWTKDIARAEALGEQL 405 (452)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHHc
Confidence 99999999999999999999998765
No 56
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=99.78 E-value=6e-19 Score=143.45 Aligned_cols=94 Identities=19% Similarity=0.201 Sum_probs=76.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||..... . ..|.|+.|||+... + +++++++||+||||++|++|+|. ||+|+++
T Consensus 319 ~~i~~a~~-~Ga~~l~gg~~~~~--~-~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~~~ 386 (459)
T cd07089 319 GYIARGRD-EGARLVTGGGRPAG--L-DKGFYVEPTLFADV-D-----NDMRIAQEEIFGPVLVVIPYDDD--DEAVRIA 386 (459)
T ss_pred HHHHHHHH-CCCEEEeCCCcCCC--C-CCCeEECCEEEEcC-C-----CCCHHHhCCCcCceEEEeccCCH--HHHHHHH
Confidence 45555655 69999999975321 1 13458999997532 1 45899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 387 n~~~~gL~~~v~t~d~~~~~~~~~~~ 412 (459)
T cd07089 387 NDSDYGLSGGVWSADVDRAYRVARRI 412 (459)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999988764
No 57
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=99.78 E-value=6e-19 Score=146.19 Aligned_cols=98 Identities=22% Similarity=0.332 Sum_probs=75.1
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCC-CCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHS-IPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~-~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~ 80 (109)
.++++.+. +|+++++||....... .+.+|+|++|||+..... ++++.+++||+||||++|++|++. +|+|+
T Consensus 348 ~~~i~~~~--~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~----~~~~~i~~eE~FGPvl~V~~~~~~--~eai~ 419 (521)
T PRK11903 348 RAGLAALR--AQAEVLFDGGGFALVDADPAVAACVGPTLLGASDP----DAATAVHDVEVFGPVATLLPYRDA--AHALA 419 (521)
T ss_pred HHHHHHHh--cCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCC----CccchHHhCcccCCeEEEEeeCCH--HHHHH
Confidence 35566543 5999999996421100 012345899999853211 134788999999999999999965 99999
Q ss_pred HHhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 81 ALERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 81 ~an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
++|+++|||+++|||+|..++++++..
T Consensus 420 ~~N~~~~gL~asvft~d~~~~~~~~~~ 446 (521)
T PRK11903 420 LARRGQGSLVASVYSDDAAFLAAAALE 446 (521)
T ss_pred HHhcCCCCceEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999998875
No 58
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=99.78 E-value=5.3e-19 Score=143.85 Aligned_cols=89 Identities=22% Similarity=0.294 Sum_probs=74.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||.. .|.|++|||+... + +++++++||+|||+++|++|+|. ||+|+++
T Consensus 327 ~~v~~a~~-~ga~vl~gg~~--------~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 389 (465)
T cd07151 327 DKIEQAVE-EGATLLVGGEA--------EGNVLEPTVLSDV-T-----NDMEIAREEIFGPVAPIIKADDE--EEALELA 389 (465)
T ss_pred HHHHHHHh-CCCEEEecCCc--------CCEEEccEEEeCC-C-----CCCchhhCcCcCCeEEEEeeCCH--HHHHHHH
Confidence 45666655 69999999853 1248999987532 1 45899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++...
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l 415 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRI 415 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988754
No 59
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=99.78 E-value=6.8e-19 Score=145.56 Aligned_cols=93 Identities=19% Similarity=0.166 Sum_probs=75.9
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||..... .+|.|++|||+... + +++.+++||+|||+++|++|++. ||+|+++
T Consensus 348 ~~i~~a~~-~Ga~vl~gG~~~~~----~~g~~~~Ptvl~~v-~-----~~~~i~~eE~FGPvl~v~~~~~~--deai~~~ 414 (524)
T PRK09407 348 AHVDDAVA-KGATVLAGGKARPD----LGPLFYEPTVLTGV-T-----PDMELAREETFGPVVSVYPVADV--DEAVERA 414 (524)
T ss_pred HHHHHHHh-CCCEEEeCCccCCC----CCCceEeCEEEeCC-C-----CCChHHhCCCCCCeEEEEeeCCH--HHHHHHH
Confidence 45666665 69999999864221 13458999997432 1 45899999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 415 N~~~~gLsa~V~t~d~~~a~~~~~~l 440 (524)
T PRK09407 415 NDTPYGLNASVWTGDTARGRAIAARI 440 (524)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 60
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=99.78 E-value=6.5e-19 Score=143.86 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ .|+++++||..... +..|+|++|||+... + +++++++||+||||++|++|+|. ||+|++
T Consensus 331 ~~~i~~a~~-~Ga~v~~gg~~~~~---~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPVl~v~~~~~~--deai~~ 398 (478)
T cd07086 331 LNAIEIAKS-QGGTVLTGGKRIDG---GEPGNYVEPTIVTGV-T-----DDARIVQEETFAPILYVIKFDSL--EEAIAI 398 (478)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC---CCCCeEEccEEecCC-C-----CCChhhcCCCcCCEEEEEEeCCH--HHHHHH
Confidence 355666665 69999999965321 013458999997432 1 45899999999999999999954 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
+|+++|||+++|||+|.+++++++.+
T Consensus 399 ~n~~~~gL~a~v~t~d~~~a~~~~~~ 424 (478)
T cd07086 399 NNDVPQGLSSSIFTEDLREAFRWLGP 424 (478)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHhc
Confidence 99999999999999999999999876
No 61
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=99.78 E-value=6.1e-19 Score=143.71 Aligned_cols=93 Identities=23% Similarity=0.235 Sum_probs=76.4
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+++++++.. +|+++++||..... .|+|++|||+... . +++.+++||+|||+++|++|++ ++|+|++
T Consensus 337 ~~~i~~a~~-~ga~vl~gg~~~~~-----~~~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~ 402 (476)
T cd07091 337 LSYIESGKK-EGATLLTGGERHGS-----KGYFIQPTVFTDV-K-----DDMKIAKEEIFGPVVTILKFKT--EDEVIER 402 (476)
T ss_pred HHHHHHHHH-CCCEEEeCCCCCCC-----CCceECcEEecCC-C-----CCChhhhCCCCCCeEEEeecCC--HHHHHHH
Confidence 345666655 69999999975431 3358999997532 1 4689999999999999999995 4999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++...
T Consensus 403 ~n~~~~gLsa~v~t~d~~~~~~~~~~l 429 (476)
T cd07091 403 ANDTEYGLAAGVFTKDINKALRVSRAL 429 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999988754
No 62
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=99.78 E-value=7.8e-19 Score=142.30 Aligned_cols=97 Identities=19% Similarity=0.215 Sum_probs=76.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. +|+++++||.......-+..|.|++|||+... . +++.+++||+||||++|++|++. ||+|+++
T Consensus 311 ~~i~~a~~-~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~-~-----~~~~~~~~E~FgPvl~v~~~~~~--deai~~~ 381 (457)
T cd07090 311 GYIESAKQ-EGAKVLCGGERVVPEDGLENGFYVSPCVLTDC-T-----DDMTIVREEIFGPVMSILPFDTE--EEVIRRA 381 (457)
T ss_pred HHHHHHHH-CCCEEEECCCcCcccccCCCCeeECCEEEecC-C-----CCChHHhCCCCCCeEEEEEECCH--HHHHHHH
Confidence 45666655 69999999965321000113458999997532 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 382 n~~~~gLsa~i~t~d~~~~~~~~~~l 407 (457)
T cd07090 382 NDTTYGLAAGVFTRDLQRAHRVIAQL 407 (457)
T ss_pred hCCCcCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999988754
No 63
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=99.78 E-value=7.1e-19 Score=143.09 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=76.4
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+..|+++++||.... +|.|++|||+.++... . +++++++||+||||++|++|++. ||+|++
T Consensus 302 ~~~i~~a~~~~ga~~l~gg~~~~------~g~~~~Ptvl~~~~~~-~--~~~~i~~~E~FGPv~~v~~~~~~--~eai~~ 370 (454)
T cd07129 302 RQGVEALAAAPGVRVLAGGAAAE------GGNQAAPTLFKVDAAA-F--LADPALQEEVFGPASLVVRYDDA--AELLAV 370 (454)
T ss_pred HHHHHHHHhcCCcEEEeCCCcCC------CCCccCCEEEEccCCc-c--ccchhhcccCCCCeEEEEEeCCH--HHHHHH
Confidence 35677776634999999996431 2358999998643211 1 35899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCC--HHHHHHHHHh
Q 033913 82 LERMHAHLTAAVVSND--PLFLQLQLIS 107 (109)
Q Consensus 82 an~~~~gLta~Vfs~d--~~~~~~~~~~ 107 (109)
+|+++|||+++|||+| ..++++++..
T Consensus 371 ~n~~~~gL~a~vft~d~~~~~a~~~~~~ 398 (454)
T cd07129 371 AEALEGQLTATIHGEEDDLALARELLPV 398 (454)
T ss_pred HhcCCCCcEEEEEccCchHHHHHHHHHH
Confidence 9999999999999999 8999988774
No 64
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=99.78 E-value=7.6e-19 Score=142.37 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=73.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. |+++++||.... +|.|+.|||+... + +++++++||+|||+++|++|+|. ||+|+++
T Consensus 294 ~~i~~a~~--ga~~l~gg~~~~------~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--deai~~~ 357 (432)
T cd07137 294 RLLDDPSV--ADKIVHGGERDE------KNLYIEPTILLDP-P-----LDSSIMTEEIFGPLLPIITVKKI--EESIEII 357 (432)
T ss_pred HHHHHHHh--CCeEEeCCCcCC------CCCEEeeEEEecC-C-----CcchhhhcccccCceEEEEeCCH--HHHHHHH
Confidence 45555554 789999985421 2358999998432 1 35899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++++++...
T Consensus 358 N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 358 NSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred hcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988753
No 65
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=99.78 E-value=8.2e-19 Score=142.00 Aligned_cols=91 Identities=21% Similarity=0.284 Sum_probs=75.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||.... .|+|++|||+... ++++.+++||+||||++|++|+|. +|+|+++
T Consensus 294 ~~i~~a~~-~ga~~~~gg~~~~------~g~~~~Ptvl~~~------~~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 358 (433)
T cd07134 294 GLLDDAVA-KGAKVEFGGQFDA------AQRYIAPTVLTNV------TPDMKIMQEEIFGPVLPIITYEDL--DEVIEYI 358 (433)
T ss_pred HHHHHHHh-CCCEEEeCCCcCC------CCCEEeeEEEeCC------CCccHHHhccccCceEEEEEeCCH--HHHHHHH
Confidence 45666665 6999999986422 2358999998532 145899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++++++...
T Consensus 359 n~~~~gl~a~v~t~d~~~~~~~~~~l 384 (433)
T cd07134 359 NAKPKPLALYVFSKDKANVNKVLART 384 (433)
T ss_pred hCCCCCcEEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988764
No 66
>PLN02467 betaine aldehyde dehydrogenase
Probab=99.78 E-value=8.3e-19 Score=144.63 Aligned_cols=95 Identities=20% Similarity=0.259 Sum_probs=77.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||..... ...|.|++|||+... + +++++++||+|||+++|++|++. ||+|++
T Consensus 346 ~~~v~~a~~-~Ga~vl~gG~~~~~---~~~g~~~~Ptvl~~v-~-----~~~~i~~eE~FgPvl~v~~~~~~--~eAi~~ 413 (503)
T PLN02467 346 LKFISTAKS-EGATILCGGKRPEH---LKKGFFIEPTIITDV-T-----TSMQIWREEVFGPVLCVKTFSTE--DEAIEL 413 (503)
T ss_pred HHHHHHHHH-CCCEEEeCCCCCCC---CCCCeEEeeEEEeCC-C-----CCChHhhCCCCCceEEEEeeCCH--HHHHHH
Confidence 356666665 69999999965321 113458999997532 1 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 414 aN~~~~gL~a~v~t~d~~~a~~~~~~l 440 (503)
T PLN02467 414 ANDSHYGLAGAVISNDLERCERVSEAF 440 (503)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999999988764
No 67
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=99.78 E-value=8.2e-19 Score=141.44 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++.++ +|+++++||..... ..|.|+.|||+... . +++.+++||+|||+++|++|+|. ||+|++
T Consensus 291 ~~~i~~a~~-~ga~~~~gg~~~~~----~~~~~~~Ptvl~~~-~-----~~~~~~~eE~fgPvl~v~~~~~~--deai~~ 357 (432)
T cd07105 291 KELVDDALS-KGAKLVVGGLADES----PSGTSMPPTILDNV-T-----PDMDIYSEESFGPVVSIIRVKDE--EEAVRI 357 (432)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC----CCCeEEeeEEEecC-C-----CCCHHHhCCCcCCeEEEEeeCCH--HHHHHH
Confidence 345566655 69999999875421 12358999998532 1 45899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.++
T Consensus 358 ~n~~~~gL~~~v~t~d~~~~~~~~~~l 384 (432)
T cd07105 358 ANDSEYGLSAAVFTRDLARALAVAKRI 384 (432)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 68
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=99.78 E-value=8.9e-19 Score=141.44 Aligned_cols=93 Identities=18% Similarity=0.176 Sum_probs=76.1
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++. +|+++++||..... .|.|++|||+... . +++++++||+|||+++|++|++ +||||++
T Consensus 312 ~~~i~~a~--~ga~~~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~--~deai~~ 376 (450)
T cd07092 312 AGFVERAP--AHARVLTGGRRAEG-----PGYFYEPTVVAGV-A-----QDDEIVQEEIFGPVVTVQPFDD--EDEAIEL 376 (450)
T ss_pred HHHHHHHH--cCCEEEeCCCCCCC-----CccEEeeEEEEcC-C-----CCChHHhCCCcCceEEEEEECC--HHHHHHH
Confidence 34566655 59999999965321 3358999997532 1 3589999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
+|+++|||+++|||+|.+++.+++.+++
T Consensus 377 ~n~~~~gL~~~vft~d~~~~~~~~~~l~ 404 (450)
T cd07092 377 ANDVEYGLASSVWTRDVGRAMRLSARLD 404 (450)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcC
Confidence 9999999999999999999999987653
No 69
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=99.78 E-value=8.5e-19 Score=141.99 Aligned_cols=96 Identities=18% Similarity=0.136 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. .|+++++||...... +..|+|+.|||+... . +++.+++||+|||+++|++|++ +||+|++
T Consensus 311 ~~~i~~a~~-~ga~~l~gg~~~~~~--~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~fgPvl~v~~~~~--~deAi~~ 379 (454)
T cd07109 311 EGFVARARA-RGARIVAGGRIAEGA--PAGGYFVAPTLLDDV-P-----PDSRLAQEEIFGPVLAVMPFDD--EAEAIAL 379 (454)
T ss_pred HHHHHHHHh-CCCEEEeCCCcCccc--CCCCcEECcEEEecC-C-----CCChhhhCCCCCceEEEEecCC--HHHHHHH
Confidence 355666655 699999998643210 123458999987532 1 4589999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++.++
T Consensus 380 ~n~~~~gL~~~i~t~d~~~~~~~~~~l 406 (454)
T cd07109 380 ANGTDYGLVAGVWTRDGDRALRVARRL 406 (454)
T ss_pred hhCCCCCceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999998765
No 70
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=99.78 E-value=6.6e-19 Score=144.83 Aligned_cols=89 Identities=12% Similarity=-0.006 Sum_probs=73.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. .|+++++||.. .|.|+.|||+... + +++++++||+||||++|++|+|. ||+|+++
T Consensus 350 ~~i~~a~~-~Ga~~l~~~~~--------~g~~~~Ptvl~~v-~-----~~~~i~~eE~FgPvl~v~~~~~~--deai~~a 412 (496)
T PLN00412 350 GLVMDAKE-KGATFCQEWKR--------EGNLIWPLLLDNV-R-----PDMRIAWEEPFGPVLPVIRINSV--EEGIHHC 412 (496)
T ss_pred HHHHHHHH-CCCEEEecCCC--------CCeEEecEEEeCC-C-----CCCHHHhCcCCCCeEEEEEeCCH--HHHHHHH
Confidence 44555555 69999987742 1258999998532 1 46899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 413 n~~~~gL~a~v~t~d~~~a~~~~~~l 438 (496)
T PLN00412 413 NASNFGLQGCVFTRDINKAILISDAM 438 (496)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 71
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=99.78 E-value=9.7e-19 Score=142.03 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||........ ..|.|+.|||+... . +++.+++||+||||++|++|+|. ||++++
T Consensus 318 ~~~i~~a~~-~Ga~~~~gg~~~~~~~~-~~g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~~--~eai~~ 387 (465)
T cd07098 318 EELVADAVE-KGARLLAGGKRYPHPEY-PQGHYFPPTLLVDV-T-----PDMKIAQEEVFGPVMVVMKASDD--EEAVEI 387 (465)
T ss_pred HHHHHHHHH-CCCEEEeCCccCCcCcC-CCCcEEcCEEEeCC-C-----CCCHHHhCCCcCCeEEEEEeCCH--HHHHHH
Confidence 345666655 69999999864321101 13458999997532 1 45889999999999999999954 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++.++
T Consensus 388 ~n~~~~gLsa~i~t~d~~~~~~~~~~l 414 (465)
T cd07098 388 ANSTEYGLGASVFGKDIKRARRIASQL 414 (465)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 72
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=99.78 E-value=8.5e-19 Score=143.25 Aligned_cols=96 Identities=24% Similarity=0.279 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. +|+++++||..... ....|.|++|||+... + +++.+++||+|||+++|++|+| ++|+|++
T Consensus 340 ~~~i~~a~~-~ga~v~~gg~~~~~--~~~~g~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~ 408 (484)
T cd07144 340 LSYIEKGKK-EGAKLVYGGEKAPE--GLGKGYFIPPTIFTDV-P-----QDMRIVKEEIFGPVVVISKFKT--YEEAIKK 408 (484)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCcc--cCCCCceECCEEEeCC-C-----CCCchhhCCCCCceEEEeccCC--HHHHHHH
Confidence 345666655 69999999875321 0123458999997532 1 4689999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++.+.
T Consensus 409 ~n~~~~gLsa~i~t~d~~~a~~~~~~l 435 (484)
T cd07144 409 ANDTTYGLAAAVFTKDIRRAHRVAREL 435 (484)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999998764
No 73
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=99.78 E-value=4.7e-19 Score=143.75 Aligned_cols=96 Identities=24% Similarity=0.246 Sum_probs=76.3
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. .|+++++||..... .+..|+|++|||+... . +++++++||+||||++|++|++ ++|++++
T Consensus 321 ~~~i~~a~~-~ga~v~~gg~~~~~--~~~~g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~--~~eai~~ 389 (462)
T PF00171_consen 321 KALIEDAVA-EGAKVLCGGEPQEA--DPENGFFIPPTVLEDV-P-----PDMPIMQEEIFGPVLPVVPYDD--LDEAIAL 389 (462)
T ss_dssp HHHHHHHHH-TTSEEEEETSSSSB--CSSSSTEEEEEEEESE-H-----TTSHHHHSC-SSSEEEEEEESS--HHHHHHH
T ss_pred ccccccccc-cccccccccccccc--cccccccccccccccc-c-----ccccccccccccccceeccccc--chhhhhc
Confidence 356677776 69999999931110 1124469999998532 1 4689999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 390 ~n~~~~gl~a~v~s~d~~~~~~~~~~l 416 (462)
T PF00171_consen 390 ANDSEYGLTASVFSRDESRAERLARRL 416 (462)
T ss_dssp HHHSSEESEEEEECSBHHHHHHHHHHS
T ss_pred ccccCCCceeEEecccccccccccccc
Confidence 999999999999999999999998764
No 74
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=99.78 E-value=9.5e-19 Score=142.27 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=76.9
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||..... . ..++|+.|||+... . +++++++||+|||+++|++|+|. ||+|++
T Consensus 331 ~~~i~~a~~-~ga~v~~gg~~~~~--~-~~~~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~ 398 (471)
T cd07139 331 EGYIAKGRA-EGARLVTGGGRPAG--L-DRGWFVEPTLFADV-D-----NDMRIAQEEIFGPVLSVIPYDDE--DDAVRI 398 (471)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCC--C-CCCeEEccEEEecC-C-----CcchHHhCccCCCeEEEeecCCH--HHHHHH
Confidence 345666555 69999999964321 0 12458999997532 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++.+.
T Consensus 399 ~n~~~~gL~a~i~s~d~~~~~~~~~~l 425 (471)
T cd07139 399 ANDSDYGLSGSVWTADVERGLAVARRI 425 (471)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 75
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=99.78 E-value=6.1e-19 Score=149.71 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=76.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCC--CCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKN--HSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVL 79 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~--~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai 79 (109)
.++++++++ . +++++||..... ...+..|+|++|||+...... +++.+++||+||||++|++|++. ||+|
T Consensus 348 ~~~i~~a~~-~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~----~~~~i~~eEiFGPVl~V~~~~~~--~eai 419 (675)
T PRK11563 348 REKVAALLA-A-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPL----EAPAVHDVEAFGPVSTLMPYDDL--DEAI 419 (675)
T ss_pred HHHHHHHHh-C-CEEEECCcccccccCCCCCCCeeECCEEEeccCch----hhhhHhhccccCCceEEEecCCH--HHHH
Confidence 467778876 4 899999953110 000123458999998532110 13689999999999999999965 9999
Q ss_pred HHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 80 NALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 80 ~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+++|+++|||+++|||+|.+++++++...
T Consensus 420 ~~aN~s~~gL~asvft~d~~~a~~~~~~l 448 (675)
T PRK11563 420 ELAARGKGSLVASLVTADPEVARELVLGA 448 (675)
T ss_pred HHHhcCCCCceEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999988754
No 76
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=99.78 E-value=8.1e-19 Score=142.19 Aligned_cols=90 Identities=21% Similarity=0.276 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ .|+++++||.... |.|++|||+... . +++.+++||+|||+++|++|++. +|+|+++
T Consensus 319 ~~i~~a~~-~ga~vl~gg~~~~-------g~~~~Ptvl~~~-~-----~~~~i~~~E~fgPvl~v~~~~~~--~eai~~~ 382 (456)
T cd07145 319 NLVNDAVE-KGGKILYGGKRDE-------GSFFPPTVLEND-T-----PDMIVMKEEVFGPVLPIAKVKDD--EEAVEIA 382 (456)
T ss_pred HHHHHHHH-CCCEEEeCCCCCC-------CeEECCEeecCC-C-----CCChHhhCCCCCceEEEEEECCH--HHHHHHH
Confidence 45666655 6999999986431 358999998532 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++.+++.+.
T Consensus 383 n~~~~gL~~~v~t~d~~~~~~~~~~~ 408 (456)
T cd07145 383 NSTEYGLQASVFTNDINRALKVAREL 408 (456)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988754
No 77
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=99.78 E-value=1.3e-18 Score=142.14 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ .|+++++||....... +..|.|++|||+... . +++.+++||+|||++.|++|++. +|+|++
T Consensus 329 ~~~i~~a~~-~Ga~il~gg~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~V~~~~~~--~eai~~ 398 (477)
T TIGR01722 329 ASLIAGGAA-EGAEVLLDGRGYKVDG-YEEGNWVGPTLLERV-P-----PTMKAYQEEIFGPVLCVLEADTL--EEAIAL 398 (477)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCCCC-CCCCeEECCEEeeCC-C-----CCChhhhCCCCCCeEEEEEeCCH--HHHHHH
Confidence 356666666 6999999997521111 123458999987532 1 45899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 399 ~n~~~~gl~~~v~t~d~~~~~~~~~~l 425 (477)
T TIGR01722 399 INASPYGNGTAIFTRDGAAARRFQHEI 425 (477)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998865
No 78
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=99.77 E-value=1.1e-18 Score=142.12 Aligned_cols=95 Identities=18% Similarity=0.267 Sum_probs=75.9
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||...... ...|.|++|||+... ++++.+++||+||||++|++|++. ||+|+++
T Consensus 314 ~~i~~a~~-~ga~~~~~g~~~~~~--~~~g~~~~Ptvl~~~------~~d~~i~~~E~FgPvl~v~~~~~~--deai~~~ 382 (455)
T cd07120 314 RMVERAIA-AGAEVVLRGGPVTEG--LAKGAFLRPTLLEVD------DPDADIVQEEIFGPVLTLETFDDE--AEAVALA 382 (455)
T ss_pred HHHHHHHH-CCCEEEeCCccCccc--CCCCceECCEEEecC------CCCChhhhCcCcCceEEEeecCCH--HHHHHHH
Confidence 45666664 699999987542211 113458999997532 146899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 383 n~~~~gLs~~ift~d~~~a~~~~~~l 408 (455)
T cd07120 383 NDTDYGLAASVWTRDLARAMRVARAI 408 (455)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999988754
No 79
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=99.77 E-value=9.8e-19 Score=141.24 Aligned_cols=89 Identities=22% Similarity=0.229 Sum_probs=74.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||... |+|++|||+... . +++.+++||+|||+++|++|++. ||+|+++
T Consensus 315 ~~i~~a~~-~Ga~vl~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~~--~eai~~~ 377 (451)
T cd07150 315 RQVEDAVA-KGAKLLTGGKYD--------GNFYQPTVLTDV-T-----PDMRIFREETFGPVTSVIPAKDA--EEALELA 377 (451)
T ss_pred HHHHHHHh-CCCEEEeCCccC--------CcEEcCEEEeCC-C-----CCCHHHhCCCcCceEEEEEeCCH--HHHHHHH
Confidence 45666665 699999998531 258999998532 1 45889999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++...
T Consensus 378 n~~~~gL~a~v~t~d~~~~~~~~~~l 403 (451)
T cd07150 378 NDTEYGLSAAILTNDLQRAFKLAERL 403 (451)
T ss_pred hCCCCCCeEEEEeCCHHHHHHHHHhc
Confidence 99999999999999999999987653
No 80
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=99.77 E-value=1.6e-18 Score=141.13 Aligned_cols=96 Identities=19% Similarity=0.148 Sum_probs=76.6
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. .|+++++||....... +..|.|++|||+.... +++++++||+||||++|++|++. ||+|+++
T Consensus 331 ~~i~~a~~-~Ga~~~~gg~~~~~~~-~~~g~~~~Ptvl~~~~------~~~~~~~~E~FgPvl~v~~~~~~--~eai~~~ 400 (478)
T cd07131 331 NYNEIGKE-EGATLLLGGERLTGGG-YEKGYFVEPTVFTDVT------PDMRIAQEEIFGPVVALIEVSSL--EEAIEIA 400 (478)
T ss_pred HHHHHHHH-CCCEEEeCCCcccccc-CCCCceECCEEEeCCC------CCChHhhCCCcCCeEEEEEeCCH--HHHHHHH
Confidence 45566655 6999999986532110 1234589999985331 45889999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l 426 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDL 426 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999998765
No 81
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=99.77 E-value=1.6e-18 Score=142.02 Aligned_cols=92 Identities=21% Similarity=0.193 Sum_probs=75.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. .|+++++||..... .|.|+.|||+... + +++++++||+||||++|++|++. +|+|+++
T Consensus 341 ~~i~~a~~-~ga~v~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 406 (481)
T cd07143 341 SYIESGKA-EGATVETGGKRHGN-----EGYFIEPTIFTDV-T-----EDMKIVKEEIFGPVVAVIKFKTE--EEAIKRA 406 (481)
T ss_pred HHHHHHHh-CCCEEEeCCCCCCC-----CceEEeeEEEecC-C-----CCChhhhcCCcCCeEEEEeeCCH--HHHHHHH
Confidence 45566555 69999999975321 3458999997432 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++...
T Consensus 407 n~~~~gL~~~v~t~d~~~~~~~~~~l 432 (481)
T cd07143 407 NDSTYGLAAAVFTNNINNAIRVANAL 432 (481)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhc
Confidence 99999999999999999999988653
No 82
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=99.77 E-value=1.6e-18 Score=140.86 Aligned_cols=94 Identities=21% Similarity=0.198 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+++++++. +|+++++||..... ..|.|++|||+... + +++.+++||+|||++.|++|++ ++|+|++
T Consensus 314 ~~~i~~a~~-~ga~v~~gg~~~~~----~~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~ 380 (454)
T cd07118 314 TDYVDAGRA-EGATLLLGGERLAS----AAGLFYQPTIFTDV-T-----PDMAIAREEIFGPVLSVLTFDT--VDEAIAL 380 (454)
T ss_pred HHHHHHHHh-CCCEEEeCCCCCCC----CCCeEEeCEEEeCC-C-----CCCHHHhCCCCCceEEEEEECC--HHHHHHH
Confidence 345666655 69999999975431 13458999987532 1 4589999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 381 ~n~~~~gL~~~vft~d~~~~~~~~~~l 407 (454)
T cd07118 381 ANDTVYGLSAGVWSKDIDTALTVARRI 407 (454)
T ss_pred HhCCCccceEEEECCCHHHHHHHHHhc
Confidence 999999999999999999999988753
No 83
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=99.77 E-value=2.1e-18 Score=141.79 Aligned_cols=94 Identities=26% Similarity=0.287 Sum_probs=75.9
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. .| ++++||..... .|.|++|||+.... +++.+++||+|||+++|++|++.+++|+|++
T Consensus 355 ~~~i~~a~~-~g-~vl~gg~~~~~-----~g~~~~Ptvl~~~~------~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~ 421 (500)
T cd07083 355 LSYIEHGKN-EG-QLVLGGKRLEG-----EGYFVAPTVVEEVP------PKARIAQEEIFGPVLSVIRYKDDDFAEALEV 421 (500)
T ss_pred HHHHHHHHh-CC-EEEeCCCcCCC-----CCeEEccEEEeCCC------CCChHhhCCCCCceEEEEEeCCCCHHHHHHH
Confidence 356666655 35 99999865331 23589999985331 4689999999999999999994446999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 422 ~n~~~~gL~~~v~t~d~~~~~~~~~~l 448 (500)
T cd07083 422 ANSTPYGLTGGVYSRKREHLEEARREF 448 (500)
T ss_pred HhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 84
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=99.77 E-value=1.5e-18 Score=141.51 Aligned_cols=96 Identities=18% Similarity=0.161 Sum_probs=75.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ +|+++++||....... ...|.|++|||+... . +++.+++||+|||+++|++|++ +||||+++
T Consensus 330 ~~i~~a~~-~Ga~v~~gg~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~--~deai~~~ 399 (482)
T cd07119 330 SYIQLGKE-EGARLVCGGKRPTGDE-LAKGYFVEPTIFDDV-D-----RTMRIVQEEIFGPVLTVERFDT--EEEAIRLA 399 (482)
T ss_pred HHHHHHHH-CCCEEEeCCccccccc-CCCCceECCEEEecC-C-----CCChHhhCCCCCceEEEeccCC--HHHHHHHH
Confidence 44555554 6999999996432100 012458999998532 1 4689999999999999999995 49999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l 425 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRL 425 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhc
Confidence 99999999999999999999988764
No 85
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=99.77 E-value=1.4e-18 Score=141.20 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=76.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.+ +|+++++||...... ...|.|++|||+... + +++++++||+|||+++|++|+|. ||+|++
T Consensus 325 ~~~v~~a~~-~Ga~~l~gg~~~~~~--~~~g~~~~Ptvl~~~-~-----~~~~i~~eE~fgPvl~v~~~~~~--~eai~~ 393 (466)
T cd07138 325 QGYIQKGIE-EGARLVAGGPGRPEG--LERGYFVKPTVFADV-T-----PDMTIAREEIFGPVLSIIPYDDE--DEAIAI 393 (466)
T ss_pred HHHHHHHHH-CCCEEEeCCCcCCCc--CCCCceECCEEecCC-C-----CCChHHhCCCCCceEEEeccCCH--HHHHHH
Confidence 356666665 699999998632210 113458999987422 1 46899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++..+
T Consensus 394 ~n~~~~gL~a~i~t~d~~~a~~~~~~l 420 (466)
T cd07138 394 ANDTPYGLAGYVWSADPERARAVARRL 420 (466)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhc
Confidence 999999999999999999999998765
No 86
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=99.77 E-value=1.6e-18 Score=142.78 Aligned_cols=88 Identities=26% Similarity=0.378 Sum_probs=72.4
Q ss_pred HHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCC
Q 033913 7 KLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMH 86 (109)
Q Consensus 7 ~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~ 86 (109)
++...+|+++++||.... .+.|++|||+... + +++.+++||+||||++|++|++ ++|||+++|+++
T Consensus 301 ~~i~~~ga~~~~gG~~~~------~~~~i~Ptvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~--~deAi~~~n~~~ 366 (493)
T PTZ00381 301 ELIKDHGGKVVYGGEVDI------ENKYVAPTIIVNP-D-----LDSPLMQEEIFGPILPILTYEN--IDEVLEFINSRP 366 (493)
T ss_pred HHHHhCCCcEEECCCcCC------CCCeEeeEEEecC-C-----CCChHHhccccCCeEEEEeeCC--HHHHHHHHhcCC
Confidence 333346899999986422 2348999998532 1 4589999999999999999995 599999999999
Q ss_pred CCceEEEecCCHHHHHHHHHhc
Q 033913 87 AHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 87 ~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|||+++|||+|..++.+++.+.
T Consensus 367 ~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 367 KPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred CCceEEEECCCHHHHHHHHHhC
Confidence 9999999999999999988754
No 87
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=99.77 E-value=1.5e-18 Score=143.00 Aligned_cols=91 Identities=22% Similarity=0.204 Sum_probs=73.6
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. +| ++++||.... ..|+|++|||+... + +++++++||+||||+.|++|++ +||+|+++
T Consensus 369 ~~i~~a~~-~g-~~l~gg~~~~-----~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPVl~v~~~~~--~deai~~~ 433 (511)
T TIGR01237 369 EYIEQGKA-EG-ELAIGGCDAP-----SEGYFIGPTIFKDV-D-----RHARLAQEEIFGPVVAIIRAAD--FDEALEIA 433 (511)
T ss_pred HHHHHHHH-CC-cEEECCccCC-----CCCeEEcCEEEeCC-C-----CCChHhhCCCcCCeEEEEeeCC--HHHHHHHH
Confidence 45555554 46 8999886422 13458999997432 1 4689999999999999999995 49999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.++
T Consensus 434 n~~~~gL~a~i~t~d~~~~~~~~~~l 459 (511)
T TIGR01237 434 NGTEYGLTGGVYSNTRDHIERAAAEF 459 (511)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 88
>PLN02203 aldehyde dehydrogenase
Probab=99.77 E-value=1.7e-18 Score=142.49 Aligned_cols=91 Identities=16% Similarity=0.202 Sum_probs=73.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. . +++++||.... .|.|++|||+... . +++++++||+||||+.|++|++. +|+|++
T Consensus 303 ~~~i~~a~~-~-~~~~~gg~~~~------~g~~i~PTvl~~v-~-----~d~~i~~eE~FGPVl~v~~~~~~--~eai~~ 366 (484)
T PLN02203 303 SNLLKDPRV-A-ASIVHGGSIDE------KKLFIEPTILLNP-P-----LDSDIMTEEIFGPLLPIITVKKI--EDSIAF 366 (484)
T ss_pred HHHHHHHHh-C-CeEEeCCCcCC------CCCEEeeEEEecC-C-----CCCHHHhcCccCCeEEEEeeCCH--HHHHHH
Confidence 345666654 3 68999986421 2358999998532 1 46899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|..++++++.+.
T Consensus 367 aN~~~~gL~a~vft~d~~~a~~~~~~l 393 (484)
T PLN02203 367 INSKPKPLAIYAFTNNEKLKRRILSET 393 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999988764
No 89
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=99.77 E-value=1.9e-18 Score=139.86 Aligned_cols=92 Identities=20% Similarity=0.201 Sum_probs=75.1
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ .|+++++||..... .|.|++|||+... + +++.+++||+||||++|++|++. ||+|+++
T Consensus 313 ~~i~~a~~-~Ga~v~~gg~~~~~-----~g~~~~Ptvl~~~-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 378 (453)
T cd07115 313 DYVDVGRE-EGARLLTGGKRPGA-----RGFFVEPTIFAAV-P-----PEMRIAQEEIFGPVVSVMRFRDE--EEALRIA 378 (453)
T ss_pred HHHHHHHH-CCCEEEeCCCCCCC-----CCceECCEEEecC-C-----CCChHhhCCCcCceEEEEeeCCH--HHHHHHH
Confidence 44555555 58999999865321 2358999997532 1 45899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 379 n~~~~gL~~~ifs~d~~~~~~~~~~l 404 (453)
T cd07115 379 NGTEYGLAAGVWTRDLGRAHRVAAAL 404 (453)
T ss_pred hCCCCCCeEEEECCCHHHHHHHHHhc
Confidence 99999999999999999999988764
No 90
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=99.77 E-value=1.9e-18 Score=140.59 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=77.0
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++++ .|+++++||..... ...|.|++|||+... . +++++++||+||||+.|++|++. +|+|++
T Consensus 321 ~~~v~~a~~-~Ga~v~~gg~~~~~---~~~g~~~~Ptvl~~~-~-----~~~~~~~eE~fgPvl~v~~~~~~--~eai~~ 388 (462)
T cd07112 321 LGYIESGKA-EGARLVAGGKRVLT---ETGGFFVEPTVFDGV-T-----PDMRIAREEIFGPVLSVITFDSE--EEAVAL 388 (462)
T ss_pred HHHHHHHHH-CCCEEEeCCccCCC---CCCCeEEeeEEecCC-C-----CCChHHhCCCCCceEEEEEeCCH--HHHHHH
Confidence 356666665 69999999865321 113458999997532 1 46899999999999999999955 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++.+++...
T Consensus 389 ~n~~~~gL~~~i~t~d~~~~~~~~~~l 415 (462)
T cd07112 389 ANDSVYGLAASVWTSDLSRAHRVARRL 415 (462)
T ss_pred HhCCCccceEEEEcCCHHHHHHHHHhc
Confidence 999999999999999999999998764
No 91
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=99.76 E-value=1.8e-18 Score=142.15 Aligned_cols=90 Identities=24% Similarity=0.284 Sum_probs=73.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++++ +| ++++||.... .++|++|||+... + +++++++||+||||++|++|+|. +|+|+++
T Consensus 355 ~~v~~a~~-~G-~i~~gg~~~~------~~~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~~ 418 (494)
T PRK09847 355 SFIREGES-KG-QLLLDGRNAG------LAAAIGPTIFVDV-D-----PNASLSREEIFGPVLVVTRFTSE--EQALQLA 418 (494)
T ss_pred HHHHHHHH-CC-eEEECCccCC------CCceEeeEEEeCC-C-----CCChHHhCcCcCceEEEEecCCH--HHHHHHH
Confidence 45666655 57 9999986532 2358999987422 1 46899999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++.+++...
T Consensus 419 n~~~~gLsa~v~t~d~~~a~~~~~~l 444 (494)
T PRK09847 419 NDSQYGLGAAVWTRDLSRAHRMSRRL 444 (494)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999988754
No 92
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=99.76 E-value=1.9e-18 Score=140.07 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=75.9
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. .|+++++||..... ...|.|+.|||+... . +++++++||+||||++|++|++. ||+|+++
T Consensus 316 ~~v~~a~~-~Ga~~~~gg~~~~~---~~~~~~~~Ptvl~~v-~-----~~~~i~~~E~fgPvl~v~~~~~~--~eai~~~ 383 (456)
T cd07110 316 SFIARGKE-EGARLLCGGRRPAH---LEKGYFIAPTVFADV-P-----TDSRIWREEIFGPVLCVRSFATE--DEAIALA 383 (456)
T ss_pred HHHHHHHh-CCCEEEeCCCcccc---cCCCCcCCCEEEecC-C-----CCChHhhCCCcCCeEEEEecCCH--HHHHHHH
Confidence 45666655 69999999965321 113458999997522 1 35889999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 384 n~~~~gL~~~v~t~d~~~~~~~~~~l 409 (456)
T cd07110 384 NDSEYGLAAAVISRDAERCDRVAEAL 409 (456)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999998754
No 93
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=99.76 E-value=2.3e-18 Score=141.85 Aligned_cols=93 Identities=25% Similarity=0.241 Sum_probs=75.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. |+++++||..... +..|.|++|||+... + +++.+++||+||||++|++|++ +||+|+++
T Consensus 368 ~~i~~a~~--g~~vl~gG~~~~~---~~~g~~~~Ptvl~~v-~-----~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~ 434 (512)
T cd07124 368 RYIEIGKS--EGRLLLGGEVLEL---AAEGYFVQPTIFADV-P-----PDHRLAQEEIFGPVLAVIKAKD--FDEALEIA 434 (512)
T ss_pred HHHHHHHh--CCEEEecCccCCC---CCCCceEcCEEEecC-C-----CCChHHhCCCcCCeEEEEecCC--HHHHHHHH
Confidence 45566654 7899999975321 113458999987532 1 4589999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 435 n~~~~gL~~~v~t~d~~~~~~~~~~l 460 (512)
T cd07124 435 NDTEYGLTGGVFSRSPEHLERARREF 460 (512)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 94
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=99.76 E-value=3.3e-18 Score=138.64 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=75.9
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||....... ...|.|+.|||+... . +++.+++||+||||++|++|++. ||+|+++
T Consensus 315 ~~i~~a~~-~ga~~l~gg~~~~~~~-~~~g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~~--deai~~~ 384 (457)
T cd07114 315 RYVARARE-EGARVLTGGERPSGAD-LGAGYFFEPTILADV-T-----NDMRIAQEEVFGPVLSVIPFDDE--EEAIALA 384 (457)
T ss_pred HHHHHHHH-CCCEEEeCCCcccccc-CCCCCEECCEEEeCC-C-----CCChhhhcCCcCceEEEeccCCH--HHHHHHh
Confidence 45555554 6999999996532100 113458999997532 1 45899999999999999999954 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+.+.+++...
T Consensus 385 n~~~~gL~~~ift~d~~~~~~~~~~l 410 (457)
T cd07114 385 NDSEYGLAAGIWTRDLARAHRVARAI 410 (457)
T ss_pred hCCCcCceeEEECCCHHHHHHHHHhc
Confidence 99999999999999999999988764
No 95
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=99.76 E-value=2.9e-18 Score=138.32 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=75.5
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||.... ..|.|+.|||+... + +++.+++||+|||++.|++|++. +|+|+++
T Consensus 313 ~~i~~a~~-~ga~~l~gg~~~~-----~~g~~~~Ptil~~~-~-----~~~~~~~~E~fgPvl~v~~~~~~--~eai~~~ 378 (451)
T cd07103 313 ALVEDAVA-KGAKVLTGGKRLG-----LGGYFYEPTVLTDV-T-----DDMLIMNEETFGPVAPIIPFDTE--DEVIARA 378 (451)
T ss_pred HHHHHHHH-CCCEEEeCCCcCC-----CCCcEECCEEeeCC-C-----CcCHHHhCCCCCceEEEEEECCH--HHHHHHH
Confidence 45556654 6999999986532 13358999998532 1 45899999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 379 n~~~~gl~~~i~t~d~~~~~~~~~~l 404 (451)
T cd07103 379 NDTPYGLAAYVFTRDLARAWRVAEAL 404 (451)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999987654
No 96
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=99.76 E-value=3.1e-18 Score=137.36 Aligned_cols=89 Identities=21% Similarity=0.216 Sum_probs=73.6
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. +|+++++||... |.|+.|||+... + +++.+++||+||||++|++|++. ||+|+++
T Consensus 295 ~~i~~a~~-~G~~~~~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~eE~fgPvl~v~~~~~~--~eai~~~ 357 (431)
T cd07104 295 AIVEDAVA-AGARLLTGGTYE--------GLFYQPTVLSDV-T-----PDMPIFREEIFGPVAPVIPFDDD--EEAVELA 357 (431)
T ss_pred HHHHHHHH-CCCEEEeCCCCC--------CceECCEEeecC-C-----CCChhhhCcCcCCeEEEEEECCH--HHHHHHH
Confidence 34555554 699999998531 248999997532 1 45889999999999999999955 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 358 n~~~~gl~~~i~t~d~~~~~~~~~~l 383 (431)
T cd07104 358 NDTEYGLSAAVFTRDLERAMAFAERL 383 (431)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhc
Confidence 99999999999999999999998764
No 97
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=99.75 E-value=3.6e-18 Score=140.08 Aligned_cols=92 Identities=20% Similarity=0.183 Sum_probs=75.0
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++++. .|+++++||.... ..|.|+.|||+... + +++++++||+||||++|++|+| +||+|+++
T Consensus 342 ~~i~~a~~-~ga~~~~gg~~~~-----~~g~~~~Ptvl~~~-~-----~~~~i~~eE~FgPvl~v~~~~~--~deai~~~ 407 (480)
T cd07111 342 ELVEEGRA-EGADVFQPGADLP-----SKGPFYPPTLFTNV-P-----PASRIAQEEIFGPVLVVLTFRT--AKEAVALA 407 (480)
T ss_pred HHHHHHHH-CCCEEEeCCCcCC-----CCCeEEeeEEEecC-C-----CCChhhcCCCCCCeeEeecCCC--HHHHHHHH
Confidence 45666655 6899999886422 13458999998532 1 4689999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++.+++.+.
T Consensus 408 n~~~~gL~~~i~t~d~~~~~~~~~~l 433 (480)
T cd07111 408 NNTPYGLAASVWSENLSLALEVALSL 433 (480)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999987653
No 98
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=99.75 E-value=4.8e-19 Score=143.07 Aligned_cols=96 Identities=21% Similarity=0.295 Sum_probs=80.6
Q ss_pred HHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHh
Q 033913 4 HMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALE 83 (109)
Q Consensus 4 ~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an 83 (109)
++.++.+ +|+++++||.+..-..+|.+. |+.||++ +++. ++|.|++||+|||+++++++++. |++|++||
T Consensus 388 Lv~DAv~-KGArl~~gGsrF~Hpkyp~g~-YF~PTlL-vdvt-----~eMKIaqeE~FgPI~~im~ak~~--eh~i~lAN 457 (583)
T KOG2454|consen 388 LVNDAVD-KGARLAVGGSRFGHPKYPVGQ-YFPPTLL-VDVT-----HEMKIAQEEAFGPIMPIMQAKTD--EHVIKLAN 457 (583)
T ss_pred HHHHHHh-hcchhhhcccccCCCCCCccc-ccCCeEE-EecC-----chhhhHhhhccccchhhhhcCCh--HHHHhhcc
Confidence 3444555 799999999876544455443 8899986 3332 56999999999999999999988 99999999
Q ss_pred cCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 84 RMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 84 ~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
+++|||.++||+.|..++++++++.|
T Consensus 458 ~s~fgLG~sVFg~dk~~c~y~a~~lq 483 (583)
T KOG2454|consen 458 DSRFGLGCSVFGGDKHRCKYIASQLQ 483 (583)
T ss_pred CCcccccceeccccHHHHHHHHhhhh
Confidence 99999999999999999999999876
No 99
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=99.75 E-value=6e-18 Score=138.04 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=71.6
Q ss_pred HHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhc
Q 033913 5 MNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALER 84 (109)
Q Consensus 5 v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~ 84 (109)
+++... .+++++||.... .|+|+.|||+... + +++.+++||+||||+.|++|++. ||+|+++|+
T Consensus 290 i~~~i~--~a~~~~gG~~~~------~g~~~~Ptvl~~v-~-----~~~~~~~eE~FGPVl~v~~~~~~--~eai~~aN~ 353 (449)
T cd07136 290 LAGLLD--NGKIVFGGNTDR------ETLYIEPTILDNV-T-----WDDPVMQEEIFGPILPVLTYDTL--DEAIEIIKS 353 (449)
T ss_pred HHHHHh--cceEEECCCcCC------CCCEEeeEEEecC-C-----CcChHHhccccCCeeEEEEeCCH--HHHHHHHhC
Confidence 344443 458999986421 2358999998532 1 45899999999999999999965 999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHHhc
Q 033913 85 MHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 85 ~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
++|||+++|||+|..++++++.+.
T Consensus 354 ~~~gL~a~v~t~d~~~a~~~~~~l 377 (449)
T cd07136 354 RPKPLALYLFSEDKKVEKKVLENL 377 (449)
T ss_pred CCCCceEEEECCCHHHHHHHHHhC
Confidence 999999999999999999988764
No 100
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=99.75 E-value=4.7e-18 Score=137.03 Aligned_cols=89 Identities=21% Similarity=0.267 Sum_probs=73.9
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. +|+++++||... |+|++|||+... + +++.+++||+|||++.|++|++ ++|+|+++
T Consensus 317 ~~i~~a~~-~ga~v~~gg~~~--------g~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~ 379 (453)
T cd07149 317 EWVEEAVE-GGARLLTGGKRD--------GAILEPTVLTDV-P-----PDMKVVCEEVFAPVVSLNPFDT--LDEAIAMA 379 (453)
T ss_pred HHHHHHHH-CCCEEEeCCCCC--------CeEEcCEEEeCC-C-----CCCHHHhCCCCCceEEEEEeCC--HHHHHHHH
Confidence 45555555 589999998542 258999998532 1 3578999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++||||++|||+|.+++++++.+.
T Consensus 380 n~~~~gLt~~v~t~d~~~~~~~~~~l 405 (453)
T cd07149 380 NDSPYGLQAGVFTNDLQKALKAAREL 405 (453)
T ss_pred hCCCcCceEEEEcCCHHHHHHHHHHc
Confidence 99999999999999999999988764
No 101
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=99.75 E-value=5.1e-18 Score=140.01 Aligned_cols=92 Identities=23% Similarity=0.227 Sum_probs=74.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. . +++++||.... ..|+|+.|||+... + +++++++||+||||++|++|++. +|+|++
T Consensus 371 ~~~v~~a~~-~-~~vl~Gg~~~~-----~~g~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~~--~eai~~ 435 (514)
T PRK03137 371 MSYIEIGKE-E-GRLVLGGEGDD-----SKGYFIQPTIFADV-D-----PKARIMQEEIFGPVVAFIKAKDF--DHALEI 435 (514)
T ss_pred HHHHHHHHh-C-CEEEeCCCcCC-----CCceEEeeEEEeCC-C-----CCCHHHhCCCCCceEEEEecCCH--HHHHHH
Confidence 345666655 3 69999986432 13458999997432 1 45899999999999999999954 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++..+
T Consensus 436 ~N~~~~gL~a~v~t~d~~~a~~~~~~l 462 (514)
T PRK03137 436 ANNTEYGLTGAVISNNREHLEKARREF 462 (514)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 102
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=99.74 E-value=7.2e-18 Score=136.80 Aligned_cols=83 Identities=19% Similarity=0.258 Sum_probs=70.4
Q ss_pred CCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceE
Q 033913 12 PGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTA 91 (109)
Q Consensus 12 ~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta 91 (109)
.|+++++||.... .|+|++|||+.... +++.+++||+||||+.|++|+| +||+|+++|+++|||++
T Consensus 305 ag~~v~~gg~~~~------~g~~~~Ptvl~~~~------~~~~~~~~E~FgPvl~v~~~~~--~deai~~an~~~~gL~~ 370 (436)
T cd07135 305 TKGKVVIGGEMDE------ATRFIPPTIVSDVS------WDDSLMSEELFGPVLPIIKVDD--LDEAIKVINSRDTPLAL 370 (436)
T ss_pred cCCeEEECCCcCC------CCCEEccEEEecCC------CccHHHhccccCCceEEEecCC--HHHHHHHHhCCCCCceE
Confidence 3789999986432 34599999975321 4588999999999999999995 59999999999999999
Q ss_pred EEecCCHHHHHHHHHhc
Q 033913 92 AVVSNDPLFLQLQLISC 108 (109)
Q Consensus 92 ~Vfs~d~~~~~~~~~~~ 108 (109)
+|||+|..++++++.+.
T Consensus 371 ~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 371 YIFTDDKSEIDHILTRT 387 (436)
T ss_pred EEEcCCHHHHHHHHhcC
Confidence 99999999999998764
No 103
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.74 E-value=8.1e-18 Score=148.55 Aligned_cols=94 Identities=21% Similarity=0.207 Sum_probs=77.3
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+|++++++ |+++++||...+. ...|+|++|||+.+ +++.+++||+||||+.|++|++.+++|+|++
T Consensus 882 ~~~I~~a~~--ga~vl~gg~~~~~---~~~G~fv~PTvi~~--------~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~ 948 (1038)
T PRK11904 882 DAHIERMKR--EARLLAQLPLPAG---TENGHFVAPTAFEI--------DSISQLEREVFGPILHVIRYKASDLDKVIDA 948 (1038)
T ss_pred HHHHHHHHc--CCEEEeCCCCCCC---CCCceEEeeEEEcc--------CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHH
Confidence 467777664 7899999865321 11346899999753 2367799999999999999986678999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++||||++|||+|.+++++++.++
T Consensus 949 iN~t~yGLt~~IfS~d~~~~~~~~~~l 975 (1038)
T PRK11904 949 INATGYGLTLGIHSRIEETADRIADRV 975 (1038)
T ss_pred HhCCCCCCEEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 104
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=99.74 E-value=8.7e-18 Score=136.71 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=74.8
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. .|+++++||.... |+|+.|||+... . +++++++||+|||+++|++|++ ++|+|+++
T Consensus 335 ~~~~~a~~-~ga~~~~gg~~~~-------g~~~~Ptvl~~~-~-----~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~ 398 (473)
T cd07082 335 GLIDDAVA-KGATVLNGGGREG-------GNLIYPTLLDPV-T-----PDMRLAWEEPFGPVLPIIRVND--IEEAIELA 398 (473)
T ss_pred HHHHHHHH-CCCEEEeCCccCC-------CeEEeeEEEecC-C-----CCCHHHhCcCcCceEEEEEeCC--HHHHHHHH
Confidence 34555555 6999999986421 358999998532 1 4588999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 399 n~~~~gL~~~v~t~d~~~~~~~~~~l 424 (473)
T cd07082 399 NKSNYGLQASIFTKDINKARKLADAL 424 (473)
T ss_pred hCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999998765
No 105
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=99.73 E-value=1.8e-17 Score=136.73 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=73.8
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.++++++.. .|++++.++..... ....|.|++|||+.+ +++.+++||+|||+++|++|++.++||+|++
T Consensus 358 ~~~i~~a~~-~Ga~l~~~~~~~~~--~~~~g~f~~PTvl~~--------~~~~~~~eE~FgPvl~v~~~~~~~~deai~~ 426 (500)
T TIGR01238 358 LAHIEHMSQ-TQKKIAQLTLDDSR--ACQHGTFVAPTLFEL--------DDIAELSEEVFGPVLHVVRYKARELDQIVDQ 426 (500)
T ss_pred HHHHHHHHH-cCCEEEeeccCCCC--CCCCCeeEcCEEEcc--------CCchHhhCCCcCCEEEEEEeCCCCHHHHHHH
Confidence 355666665 58887754321110 011345899999852 2477899999999999999985457999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 427 ~N~~~~gLs~~vfT~d~~~~~~~~~~l 453 (500)
T TIGR01238 427 INQTGYGLTMGVHSRIETTYRWIEKHA 453 (500)
T ss_pred HhCCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999988764
No 106
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=99.73 E-value=1.4e-17 Score=137.48 Aligned_cols=91 Identities=16% Similarity=0.125 Sum_probs=73.0
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
.+++++.. ++++++||.... ..|.|++|||+... ++++++||+||||++|++|++.++||||+++
T Consensus 366 ~~i~~a~~--~~~vl~gg~~~~-----~~g~~~~Ptvl~~v--------~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~ 430 (518)
T cd07125 366 AHTELMRG--EAWLIAPAPLDD-----GNGYFVAPGIIEIV--------GIFDLTTEVFGPILHVIRFKAEDLDEAIEDI 430 (518)
T ss_pred HHHHHHHh--CCEEEeCCCcCC-----CCCeEEccEEEeec--------CChHhhCcccCCeEEEEEeCCCCHHHHHHHH
Confidence 45555554 468999886422 12358999997432 3788999999999999999933359999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|.+++++++.+.
T Consensus 431 n~~~~gLta~Vft~d~~~~~~~~~~l 456 (518)
T cd07125 431 NATGYGLTLGIHSRDEREIEYWRERV 456 (518)
T ss_pred hCCCCCceEEEEeCCHHHHHHHHHhC
Confidence 99999999999999999999998764
No 107
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=99.73 E-value=2.4e-17 Score=133.89 Aligned_cols=82 Identities=21% Similarity=0.280 Sum_probs=68.8
Q ss_pred CcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEE
Q 033913 13 GSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAA 92 (109)
Q Consensus 13 G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~ 92 (109)
++++++||.... .+.|+.|||+... + +++++++||+||||++|++|++ ++|+|+++|+++|||+++
T Consensus 296 ~a~~~~gg~~~~------~~~~~~Ptvl~~v-~-----~~~~~~~eE~FgPvl~v~~~~~--~~eai~~an~~~~gL~a~ 361 (443)
T cd07132 296 GGKVAIGGQTDE------KERYIAPTVLTDV-K-----PSDPVMQEEIFGPILPIVTVNN--LDEAIEFINSREKPLALY 361 (443)
T ss_pred CCEEEeCCccCC------CCCEEeeEEEeCC-C-----CCChHHhccccCceeEEEEeCC--HHHHHHHHhcCCCCcEEE
Confidence 468999986422 2358999997522 1 3589999999999999999995 599999999999999999
Q ss_pred EecCCHHHHHHHHHhc
Q 033913 93 VVSNDPLFLQLQLISC 108 (109)
Q Consensus 93 Vfs~d~~~~~~~~~~~ 108 (109)
|||+|.+++.+++.+.
T Consensus 362 i~t~d~~~~~~~~~~l 377 (443)
T cd07132 362 VFSNNKKVINKILSNT 377 (443)
T ss_pred EECCCHHHHHHHHHhC
Confidence 9999999999988764
No 108
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=99.72 E-value=2.2e-17 Score=133.50 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=75.7
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.. .|+++++||........ ..|.|+.|||+... . +++.+++||+|||++.|++|++ ++|+|+++
T Consensus 313 ~~i~~a~~-~ga~v~~gg~~~~~~~~-~~~~~~~Ptvl~~~-~-----~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~ 382 (455)
T cd07093 313 GYVELARA-EGATILTGGGRPELPDL-EGGYFVEPTVITGL-D-----NDSRVAQEEIFGPVVTVIPFDD--EEEAIELA 382 (455)
T ss_pred HHHHHHHH-CCCEEEeCCCccccccC-CCCceECCEEEecC-C-----CCChHHhCCCCCceEEEEeeCC--HHHHHHHH
Confidence 34555554 69999999965321101 12458999997532 1 4589999999999999999995 49999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+++|||+++|||+|..++.+++...
T Consensus 383 n~~~~gls~~i~t~d~~~~~~~~~~l 408 (455)
T cd07093 383 NDTPYGLAAYVWTRDLGRAHRVARRL 408 (455)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhC
Confidence 99999999999999999999988764
No 109
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.70 E-value=7.8e-17 Score=144.72 Aligned_cols=96 Identities=19% Similarity=0.236 Sum_probs=77.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+||+++++ +|.+++.||...... ...|+|+.|||+.. +++.+++||+||||+.|++|++.+++|+|+.
T Consensus 969 ~~~I~~a~~-~G~~v~~g~~~~~~~--~~~G~fv~PTIi~~--------~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~ 1037 (1318)
T PRK11809 969 ERHIQAMRA-KGRPVFQAARENSED--WQSGTFVPPTLIEL--------DSFDELKREVFGPVLHVVRYNRNQLDELIEQ 1037 (1318)
T ss_pred HHHHHHHHH-cCCEEEecCCCCCCC--CCCCeEEeeEEEec--------cchhhhcCcccCceEEEEEeCCCCHHHHHHH
Confidence 467888876 688998887532110 02346999999853 2357799999999999999986578999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++||||++|||+|.+++.+++.+.
T Consensus 1038 iN~t~yGLt~gV~Srd~~~~~~v~~~l 1064 (1318)
T PRK11809 1038 INASGYGLTLGVHTRIDETIAQVTGSA 1064 (1318)
T ss_pred HhcCCCCceEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 110
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=99.69 E-value=8.6e-17 Score=143.72 Aligned_cols=94 Identities=18% Similarity=0.169 Sum_probs=75.6
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+|+++++. .|..++.|+..... ..|+|+.|||+.+ +++.+++||+||||+.|++|++.+++|+|++
T Consensus 874 ~~~I~~a~~-~G~~l~~g~~~~~~----~~G~fv~PTVl~~--------~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~ 940 (1208)
T PRK11905 874 EAHIEAMRA-AGRLVHQLPLPAET----EKGTFVAPTLIEI--------DSISDLEREVFGPVLHVVRFKADELDRVIDD 940 (1208)
T ss_pred HHHHHHHHH-CCCEEEEccCCCCC----CCCeEEeeEEEec--------CChHHhcCCccCceEEEEEeCCCCHHHHHHH
Confidence 467788776 57777766532110 2345999999853 2367899999999999999986578999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++||||++|||+|..+++++..+.
T Consensus 941 iN~t~yGLt~~I~S~d~~~~~~~~~~l 967 (1208)
T PRK11905 941 INATGYGLTFGLHSRIDETIAHVTSRI 967 (1208)
T ss_pred HhcCCCCceEEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998765
No 111
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=99.69 E-value=1.2e-16 Score=129.03 Aligned_cols=81 Identities=22% Similarity=0.267 Sum_probs=68.1
Q ss_pred cEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEE
Q 033913 14 SKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAV 93 (109)
Q Consensus 14 ~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~V 93 (109)
+++++||.... +|+|++|||+.... +++.+++||+||||+.|++|+| ++|+|+++|+++|||+++|
T Consensus 297 a~v~~gg~~~~------~g~~~~Ptvl~~~~------~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~n~~~~gL~~~v 362 (426)
T cd07087 297 GKVVIGGQVDK------EERYIAPTILDDVS------PDSPLMQEEIFGPILPILTYDD--LDEAIEFINSRPKPLALYL 362 (426)
T ss_pred ceEEeCCccCC------CCCEEeeEEEecCC------CCCHHHhcccccceEEEEEeCC--HHHHHHHHhCCCCCceEEE
Confidence 38899986421 23589999985321 4589999999999999999995 4999999999999999999
Q ss_pred ecCCHHHHHHHHHhc
Q 033913 94 VSNDPLFLQLQLISC 108 (109)
Q Consensus 94 fs~d~~~~~~~~~~~ 108 (109)
||+|..++++++...
T Consensus 363 ~t~d~~~~~~~~~~l 377 (426)
T cd07087 363 FSEDKAVQERVLAET 377 (426)
T ss_pred ECCCHHHHHHHHhcC
Confidence 999999999988754
No 112
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=99.69 E-value=1.9e-16 Score=126.66 Aligned_cols=93 Identities=22% Similarity=0.215 Sum_probs=74.7
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
++++++.+ .|+++++||..... + .|.|++|||+... + +++.+++||+||||+.|++|++ ++|+|+++
T Consensus 292 ~~i~~~~~-~g~~~~~gg~~~~~---~-~g~~~~Ptv~~~~-~-----~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~ 358 (432)
T cd07078 292 AYIEDAKA-EGAKLLCGGKRLEG---G-KGYFVPPTVLTDV-D-----PDMPIAQEEIFGPVLPVIPFKD--EEEAIELA 358 (432)
T ss_pred HHHHHHHh-CCCEEEeCCccCCC---C-CCcEEccEEEecC-C-----CCChhhhCCCcCceEEEEEeCC--HHHHHHHH
Confidence 44555554 68999999865431 1 2358999997532 1 3578999999999999999995 59999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+.+|||+++|||+|.+.+.+++.++
T Consensus 359 n~~~~~l~~~i~t~d~~~~~~~~~~~ 384 (432)
T cd07078 359 NDTEYGLAAGVFTRDLERALRVAERL 384 (432)
T ss_pred hCCCcCceEEEECCCHHHHHHHHHhc
Confidence 99999999999999999999988654
No 113
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=99.68 E-value=4.7e-17 Score=134.43 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=80.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
+++++..+ .|++++|||.+.+. .|.|++|||+. +.+ +.+-+..||.|||+++|.+|+|.++|.++++|
T Consensus 739 ey~~~~v~-~ga~~~~gg~~~~r-----~g~~f~pti~s-~i~-----d~~f~a~eesfgpim~is~f~d~d~~~vl~ra 806 (881)
T KOG2452|consen 739 EYCQHGVK-EGATLVCGGNQVPR-----PGFFFEPTVFT-DVE-----DHMFIAKEESFGPVMIISRFADGDLDAVLSRA 806 (881)
T ss_pred HHHHHHhc-cCcEEEECCccCCC-----CCcccCCeeec-ccc-----hhhhhhhccccCceEEEEecCCCCHHHHHhhc
Confidence 45566666 69999999987654 34589999863 333 45788999999999999999999999999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
|++++||+++||++|..++.||++..|
T Consensus 807 n~tefgla~gvftrd~~k~l~v~~~l~ 833 (881)
T KOG2452|consen 807 NATEFGLASGVFTRDINKALYVSDKLQ 833 (881)
T ss_pred cccccccccceeecccchhhhhhhhhc
Confidence 999999999999999999999987654
No 114
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=99.68 E-value=4e-17 Score=131.43 Aligned_cols=76 Identities=21% Similarity=0.161 Sum_probs=63.3
Q ss_pred CCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceE
Q 033913 12 PGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTA 91 (109)
Q Consensus 12 ~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta 91 (109)
.|++++ ||.... +|+.|| ++ +++++++||+||||++|++|+| +||||+++|+++|||++
T Consensus 278 ~ga~~~-~g~~~~--------~~~~pt---v~-------~d~~i~~eE~FGPVl~v~~~~~--~deAi~~aN~~~~GLsa 336 (406)
T cd07079 278 AGVELR-GDEETL--------AILPGA---KP-------ATEEDWGTEYLDLILAVKVVDS--LDEAIAHINRYGSGHTE 336 (406)
T ss_pred CCCEEe-cCHHHH--------Hhcccc---cC-------CCcchhhhhhhCceeEEEEeCC--HHHHHHHHHHhCCcccc
Confidence 588865 443211 378888 21 4589999999999999999995 59999999999999999
Q ss_pred EEecCCHHHHHHHHHhc
Q 033913 92 AVVSNDPLFLQLQLISC 108 (109)
Q Consensus 92 ~Vfs~d~~~~~~~~~~~ 108 (109)
+|||+|.+++++++.+.
T Consensus 337 ~ift~d~~~a~~~~~~~ 353 (406)
T cd07079 337 AIVTENYETAERFLREV 353 (406)
T ss_pred EeeeCCHHHHHHHHHhC
Confidence 99999999999998764
No 115
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=99.67 E-value=9.2e-17 Score=130.40 Aligned_cols=86 Identities=14% Similarity=0.032 Sum_probs=67.1
Q ss_pred CcEEEeCCcccCCCCCCCCcceee---ceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCc
Q 033913 13 GSKLLFGGEELKNHSIPSIYGALK---PTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHL 89 (109)
Q Consensus 13 G~~~l~gG~~~~~~~~~~~~~~v~---PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gL 89 (109)
|+++++||..... ....|+|+. |||+... + +++++++||+||||++|++|+|. ||||+++|+++|||
T Consensus 289 ga~~~~gg~~~~~--~~~~G~~~~~~~ptil~~v-~-----~~~~i~~eE~FgPVl~v~~~~~~--~eAi~~an~~~~GL 358 (429)
T cd07121 289 PNKKWVGKDASKI--LKAAGIEVPADIRLIIVET-D-----KDHPFVVEEQMMPILPVVRVKNF--DEAIELAVELEHGN 358 (429)
T ss_pred ccccccCcCHHHH--HHHcCCCCCCCCeEEEEec-C-----CCCCccccccccceEEEEEeCCH--HHHHHHHHhhccCC
Confidence 5788888753100 000134666 5987432 1 46899999999999999999954 99999999999999
Q ss_pred --eEEEecCCHHHHHHHHHhc
Q 033913 90 --TAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 90 --ta~Vfs~d~~~~~~~~~~~ 108 (109)
+++|||+|.+++++++.+.
T Consensus 359 ghsa~I~t~d~~~a~~~a~~l 379 (429)
T cd07121 359 RHTAIIHSKNVENLTKMARAM 379 (429)
T ss_pred CceEEEecCCHHHHHHHHhhC
Confidence 9999999999999998764
No 116
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=99.67 E-value=2.4e-16 Score=131.82 Aligned_cols=92 Identities=13% Similarity=0.189 Sum_probs=69.6
Q ss_pred HHHHhcCCCcEEEeCCcccCCCCCCCCcc-eeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHh
Q 033913 5 MNKLLKVPGSKLLFGGEELKNHSIPSIYG-ALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALE 83 (109)
Q Consensus 5 v~~~~~~~G~~~l~gG~~~~~~~~~~~~~-~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an 83 (109)
++++.+ .| ++++||....... ..|+ |+.|||+.++. +++++++||+||||+.|++|+|. ||+|+++|
T Consensus 398 i~~a~~-~G-~v~~gG~~~~~~~--~~g~~~~~Ptvl~~~~------~d~~i~~eE~FGPVl~V~~~~d~--deAi~~aN 465 (551)
T TIGR02288 398 IAEARA-LG-EVLLASTKIEHPE--FPGARVRTPLLLKCDA------ADEAAYMQERFGPIAFVVAVDDG--AHAVELAR 465 (551)
T ss_pred HHHHHh-CC-CEEEcCccCCCCC--CCCCEEeccEEEEcCC------CCCHHHhCCCcCCEEEEEEECCH--HHHHHHHh
Confidence 555555 46 7777775421100 1233 78999985331 25899999999999999999965 99999999
Q ss_pred cC--CCC-ceEEEecCCHHHHHHHHHhc
Q 033913 84 RM--HAH-LTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 84 ~~--~~g-Lta~Vfs~d~~~~~~~~~~~ 108 (109)
++ +|| |+++|||+|.+++.++.+.+
T Consensus 466 ~~~~~~G~Lta~VfT~d~~~~~~~~~~~ 493 (551)
T TIGR02288 466 RSVREKGAMTVGAYTTDPEVVDAVQEAA 493 (551)
T ss_pred cCCCCCCCceEEEEeCCHHHHHHHHHHH
Confidence 98 566 99999999999999988763
No 117
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=99.65 E-value=1.3e-16 Score=128.93 Aligned_cols=63 Identities=21% Similarity=0.145 Sum_probs=56.4
Q ss_pred eeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 34 ALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 34 ~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
|+ |||+ + +++.+++||+||||++|++|+|. ||||+++|+++|||+++|||+|.+++++++.+.
T Consensus 297 ~~-PTi~--~-------~~~~i~~eE~FGPVl~v~~~~~~--deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l 359 (417)
T PRK00197 297 LL-PDVV--P-------ATEEDWDTEYLDLILAVKVVDSL--DEAIAHINRYGSGHTEAIVTEDYAAAERFLNEV 359 (417)
T ss_pred hh-cccc--c-------CCcchhhhhhhCceEEEEEeCCH--HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhC
Confidence 44 9986 2 24789999999999999999955 999999999999999999999999999998764
No 118
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=99.65 E-value=5.8e-16 Score=129.43 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=70.3
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcc-eeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYG-ALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~-~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
+.++++.+ .| ++++||....... ..|+ +++|||+.++ ++++++++||+||||+.|++|+|. +|+|++
T Consensus 396 ~ri~~a~~-~g-~vl~gg~~~~~~~--~~g~~~~~Ptvl~~~------~~d~~i~~eE~FGPVl~V~~~~d~--~eai~~ 463 (549)
T cd07127 396 ARIAEARQ-LG-EVLLASEAVAHPE--FPDARVRTPLLLKLD------ASDEAAYAEERFGPIAFVVATDST--DHSIEL 463 (549)
T ss_pred HHHHHHHh-CC-CEEEcCCcCCCcC--CCCceEEeCEEEEeC------CCCCHHHcCCCcCceEEEEEeCCH--HHHHHH
Confidence 34455554 34 5888886432100 1234 5699998643 146899999999999999999965 999999
Q ss_pred HhcCC--C-CceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMH--A-HLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~--~-gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|++. + |||++|||+|.++++++.+.+
T Consensus 464 an~~~~~~ggLt~sVfs~D~~~~~~~~~~~ 493 (549)
T cd07127 464 ARESVREHGAMTVGVYSTDPEVVERVQEAA 493 (549)
T ss_pred HHhcccCCCCceEEEEcCCHHHHHHHHHHH
Confidence 99984 4 699999999999999988763
No 119
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=99.62 E-value=5.5e-16 Score=126.41 Aligned_cols=95 Identities=9% Similarity=-0.075 Sum_probs=69.2
Q ss_pred HHHHHHhcCCCcEEEeCCcc-cCCCCCCCCcceeece---EEecccchhccCCCccccceeeeecceEEEEecCCCHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEE-LKNHSIPSIYGALKPT---AVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLV 78 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~-~~~~~~~~~~~~v~PT---v~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEa 78 (109)
+++++..+ .|++++ ||.. .... ..|+|+.|| ++..+ + ++ ++|.+++||+||||++|++|++. |||
T Consensus 276 ~~i~~a~~-~Ga~~~-gg~~~~~~~---~~G~~~~pt~~~i~~~~-~-~~--~~~~i~~eE~FGPVl~v~~~~~~--dEA 344 (439)
T cd07081 276 PVILKNGD-VNRDIV-GQDAYKIAA---AAGLKVPQETRILIGEV-T-SL--AEHEPFAHEKLSPVLAMYRAANF--ADA 344 (439)
T ss_pred HHHHhcCC-cCCccc-CCCHHHHHH---HcCCccCCCceEEEEec-C-CC--CCCchhhhCccCceEEEEEcCCH--HHH
Confidence 45555544 577764 4432 1000 123478998 76422 1 01 35899999999999999999955 999
Q ss_pred HHHHhcC----CCCceEEEecCC---HHHHHHHHHhc
Q 033913 79 LNALERM----HAHLTAAVVSND---PLFLQLQLISC 108 (109)
Q Consensus 79 i~~an~~----~~gLta~Vfs~d---~~~~~~~~~~~ 108 (109)
|+++|++ +|||+++|||+| .+++++++.+.
T Consensus 345 i~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 345 DAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred HHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 9999976 799999999999 99999998764
No 120
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.61 E-value=1.3e-15 Score=123.35 Aligned_cols=88 Identities=22% Similarity=0.343 Sum_probs=72.4
Q ss_pred HHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhc
Q 033913 5 MNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALER 84 (109)
Q Consensus 5 v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~ 84 (109)
+..+++.. .+++.||..+..++ |++|||+... . .++.+|+||||||+++|+.+. +++|+|+.+|+
T Consensus 294 l~~ll~~~-~kv~~Gg~~d~~d~------~I~PTIL~DV-~-----~~~p~M~eEIFGPiLPIi~v~--~l~Eai~~In~ 358 (477)
T KOG2456|consen 294 LSALLDET-GKVAIGGESDESDR------YIAPTILLDV-P-----EDSPVMQEEIFGPILPIITVQ--SLDEAINFINE 358 (477)
T ss_pred HHHHhcCC-CceecCCccchhhc------ccCCeEEecC-C-----CCChhhhhhhccCccceeEhh--hHHHHHHHHhc
Confidence 33444433 69999998765432 9999997322 1 347999999999999999999 56999999999
Q ss_pred CCCCceEEEecCCHHHHHHHHHh
Q 033913 85 MHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 85 ~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
.+-.|++++||+|...+.|++.+
T Consensus 359 ~eKPLa~Y~Fs~n~~~vkr~l~~ 381 (477)
T KOG2456|consen 359 REKPLALYIFSNNEKLVKRFLTE 381 (477)
T ss_pred CCCceEEEEecCCHHHHHHHHHh
Confidence 99999999999999999998865
No 121
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=99.60 E-value=2.2e-15 Score=129.08 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
..+++++++ +|+++ +||.... ++ +. . +++++++||+|||+++|.+|+++ ||||++
T Consensus 563 ~~~i~~a~~-~Ga~l-~Gg~~~~--------g~-----l~-~-------~~~~i~~eE~FgPv~~i~~~~~~--dEAI~~ 617 (718)
T PLN02418 563 NDLLVALRS-AGVTL-YGGPRAS--------KL-----LN-I-------PEAQSFHHEYSSLACTVEIVDDV--HAAIDH 617 (718)
T ss_pred HHHHHHHHH-CCCEE-ECCcccc--------Ce-----eC-C-------CCchhhhCCcCCeeEEEEEECCH--HHHHHH
Confidence 578899988 69999 6774311 12 21 1 34899999999999999999965 999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.++++|++...
T Consensus 618 aN~s~yGLsa~V~T~d~~~a~~~a~~l 644 (718)
T PLN02418 618 IHRHGSAHTDCIVTEDSEVAEIFLRQV 644 (718)
T ss_pred HhcCCCCCeeEEEcCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 122
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=99.57 E-value=4.7e-15 Score=121.65 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=56.9
Q ss_pred eceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHHhc
Q 033913 36 KPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHL--TAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 36 ~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gL--ta~Vfs~d~~~~~~~~~~~ 108 (109)
.|||+... + +++++++||+||||++|++|+| +||||+++|+++||| +++|||+|.+++++++.+.
T Consensus 343 ~~tvl~~v-~-----~d~~i~~eE~FGPVl~V~~~~d--~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l 409 (465)
T PRK15398 343 TRLLIVET-D-----ANHPFVVTELMMPVLPVVRVKD--VDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAI 409 (465)
T ss_pred CCEEEecC-C-----CCCchhcccccCceEEEEEeCC--HHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhC
Confidence 47876422 1 4689999999999999999995 599999999999999 9999999999999998764
No 123
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=99.56 E-value=7.5e-15 Score=125.74 Aligned_cols=84 Identities=13% Similarity=0.103 Sum_probs=67.1
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
..+++.+.+ +|++++ ||.... +|+. + .+ +++++++||+|||+++|++|++ ++|||++
T Consensus 555 ~~~v~~~~~-~Ga~l~-Gg~~~~--------~~~~--~--~~-------~~~~i~~eE~FGPvl~v~~~~~--~deAi~~ 611 (715)
T TIGR01092 555 DDLIDMLRT-EGVTIH-GGPRFA--------AYLT--F--NI-------SETKSFRTEYSSLACTVEIVDD--VYDAIDH 611 (715)
T ss_pred HHHHHHHHH-CCCEEE-CCcchh--------heec--c--CC-------CCchhhhccccCceEEEEEECC--HHHHHHH
Confidence 356777775 699985 774321 1432 1 11 3589999999999999999995 5999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+|+++|||+++|||+|.+++++++.+.
T Consensus 612 ~N~~~~gLa~~ift~d~~~a~~~~~~i 638 (715)
T TIGR01092 612 IHKHGSAHTDCIVTEDENVAEFFLQHV 638 (715)
T ss_pred HHcCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999998764
No 124
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=99.45 E-value=8.6e-14 Score=112.36 Aligned_cols=54 Identities=6% Similarity=-0.025 Sum_probs=50.9
Q ss_pred ccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 53 YELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 53 ~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+++++||+||||++|++|+|. +|||+++|+++|||+++|||+|.+++++++...
T Consensus 298 ~~i~~eE~FgPvl~v~~~~~~--~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i 351 (398)
T TIGR00407 298 KTDFDKEFLSLDLSVKIVESL--EAAIQHINQYGTQHSDAILTENKANAEQFQNGV 351 (398)
T ss_pred cccccchhhCceeEEEEECCH--HHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhC
Confidence 688999999999999999965 999999999999999999999999999998765
No 125
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=99.44 E-value=1.7e-13 Score=109.74 Aligned_cols=73 Identities=11% Similarity=-0.059 Sum_probs=58.9
Q ss_pred CCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHH----HHHHHHhcCCC
Q 033913 12 PGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLP----LVLNALERMHA 87 (109)
Q Consensus 12 ~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~e----Eai~~an~~~~ 87 (109)
+|++++.||.. .|+.|| +++.+++||+||||++|++|++. + ++++++|+++|
T Consensus 269 ~G~~~~~g~~~----------~~~~pt------------~~~~~~~~E~FgPvl~v~~~~~~--~eai~~ai~~~n~~~~ 324 (397)
T cd07077 269 EGLKVPQETKP----------LSKETT------------PSFDDEALESMTPLECQFRVLDV--ISAVENAWMIIESGGG 324 (397)
T ss_pred cCcCcCCCcee----------eEEecc------------CCCChhhhhhhCceeEEEEEcch--HHHHHHHHHHHHhcCC
Confidence 47777766521 266676 13677899999999999999964 5 66678899999
Q ss_pred CceEEEecCCHHHHHHHHHhc
Q 033913 88 HLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 88 gLta~Vfs~d~~~~~~~~~~~ 108 (109)
||+++|||+|.+++++++.+.
T Consensus 325 gl~~~Ift~d~~~~~~~~~~l 345 (397)
T cd07077 325 PHTRCVYTHKINKVDDFVQYI 345 (397)
T ss_pred CCceEEEeCCHHHHHHHHHhC
Confidence 999999999999999998764
No 126
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=99.41 E-value=1.9e-13 Score=109.28 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=75.2
Q ss_pred HHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHH
Q 033913 3 EHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 3 ~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~a 82 (109)
.-++.+++ +|+++++||...+. .|.|++|||++.. .|..++.+|.|.|++.|.+|++. +|++++-
T Consensus 352 ~~veeak~-~ggki~yggkv~er-----~gnfveptivtl~-------hda~vv~~etfapilyvlkf~~~--eea~ain 416 (507)
T KOG2453|consen 352 ASVEEAKA-SGGKIEYGGKVLER-----DGNFVEPTIVTLK-------HDAPVVLRETFAPILYVLKFSTL--EEAIAIN 416 (507)
T ss_pred HHHHHHHh-cCCeEEECCEeecc-----CCCcccceEEEec-------CCcchhhhhhccceeeEEeccch--hhhheec
Confidence 45677777 69999999987654 3459999998643 24688999999999999999965 9999999
Q ss_pred hcCCCCceEEEecCCHHHHHHHH
Q 033913 83 ERMHAHLTAAVVSNDPLFLQLQL 105 (109)
Q Consensus 83 n~~~~gLta~Vfs~d~~~~~~~~ 105 (109)
|..+-||.+++||+|..+++|+.
T Consensus 417 nev~qglsssift~n~~nifrw~ 439 (507)
T KOG2453|consen 417 NEVDQGLSSSIFTTNIQNIFRWM 439 (507)
T ss_pred cccccccchhhhhcCHHHHHhhh
Confidence 99999999999999999999864
No 127
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=99.32 E-value=3.7e-12 Score=105.14 Aligned_cols=53 Identities=9% Similarity=-0.074 Sum_probs=47.4
Q ss_pred ccccceeeeecceEEEEecCCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHHhc
Q 033913 53 YELVTREIFGPFQIVTEYKQDQLPLVLNALER----MHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 53 ~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~----~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+++ ++|+|||++.|.+|++ +||||+++|+ ..||||++|||+|.++++++....
T Consensus 332 ~~~-~~E~fgPVl~v~~~~~--~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i 388 (488)
T TIGR02518 332 NPY-SREKLTTILAFYTEEN--WHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKK 388 (488)
T ss_pred Ccc-ccCccCceEEEEEeCC--HHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 454 7999999999999995 5999999998 589999999999999999998753
No 128
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=99.31 E-value=2.2e-12 Score=105.32 Aligned_cols=55 Identities=20% Similarity=0.133 Sum_probs=49.1
Q ss_pred CCccccceeeeecceEEEEecCCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHHHHhc
Q 033913 51 GNYELVTREIFGPFQIVTEYKQDQLPLVLNALERM----HAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 51 ~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~----~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
++|+++ +|+||||++|++|+|. ||||+++|++ +|||+++|||+|.+++++++.+.
T Consensus 321 ~~~~~~-~E~FGPVl~v~~~~~~--~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l 379 (436)
T cd07122 321 PEEPLS-REKLSPVLAFYRAEDF--EEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRM 379 (436)
T ss_pred CCCcch-hcccCCeEEEEEeCCH--HHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhC
Confidence 467877 5679999999999965 9999999997 79999999999999999998764
No 129
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=99.23 E-value=1.6e-11 Score=96.55 Aligned_cols=56 Identities=21% Similarity=0.180 Sum_probs=52.0
Q ss_pred CCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhc
Q 033913 51 GNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLISC 108 (109)
Q Consensus 51 ~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~~ 108 (109)
+++++++||+|||++.|++|++ ++|+++++|+.++||+++|||+|...+.+++.++
T Consensus 264 ~~~~~~~~E~fgPv~~v~~~~~--~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~ 319 (367)
T cd06534 264 PDMPIAQEEIFGPVLPVIRFKD--EEEAIALANDTEYGLTAGVFTRDLNRALRVAERL 319 (367)
T ss_pred CCCccccCCccCceEEEEecCC--HHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhC
Confidence 4678999999999999999995 5999999999999999999999999999988765
No 130
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=99.18 E-value=1e-11 Score=88.35 Aligned_cols=68 Identities=18% Similarity=0.138 Sum_probs=61.1
Q ss_pred ceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHhcC
Q 033913 33 GALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLISCQ 109 (109)
Q Consensus 33 ~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~~~ 109 (109)
+|+.|||+.+. |+|.+..|||||||++...=.+ ++|+|.+.|..+||-...+||.+.+.++++..+||
T Consensus 65 ~f~~~tiLsvt-------P~ms~ykeeI~gpVlv~l~~~t--ldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~ 132 (157)
T KOG2449|consen 65 NFVGPTILSVT-------PNMSCYKEEIFGPVLVRLETET--LDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPD 132 (157)
T ss_pred CcccceEEEec-------CCcceeHhhhhcceEEEEeecC--CCceeEEEecCCCCceeEEEecCcHHhhhhhcCCC
Confidence 49999998632 6799999999999999887774 59999999999999999999999999999998886
No 131
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=99.13 E-value=8.1e-11 Score=102.57 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=56.2
Q ss_pred cceeeceE--EecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHHH
Q 033913 32 YGALKPTA--VFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERM----HAHLTAAVVSNDPLFLQLQL 105 (109)
Q Consensus 32 ~~~v~PTv--~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~----~~gLta~Vfs~d~~~~~~~~ 105 (109)
|+|+.||+ +..+.+.+ ++++++++ |+||||++|++|++. ||||+++|++ +|||+++|||+|.+++++++
T Consensus 316 G~~~~p~~~~~i~~l~~v--~~~~~~~~-E~fgPVl~v~~~~~~--deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~ 390 (862)
T PRK13805 316 GFKVPEDTKILIAEVKGV--GESEPLSH-EKLSPVLAMYKAKDF--EDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFG 390 (862)
T ss_pred CCCCCCCCeEEEEecCCC--CCCCcchh-cccCcEEEEEEECCH--HHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence 35789996 22222211 14578787 799999999999954 9999999984 79999999999999999977
Q ss_pred Hhc
Q 033913 106 ISC 108 (109)
Q Consensus 106 ~~~ 108 (109)
.+.
T Consensus 391 ~~l 393 (862)
T PRK13805 391 LRM 393 (862)
T ss_pred hhC
Confidence 653
No 132
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=99.11 E-value=1e-10 Score=98.40 Aligned_cols=93 Identities=22% Similarity=0.302 Sum_probs=70.1
Q ss_pred HHHHHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeeecceEEEEecCCCHHHHHHH
Q 033913 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (109)
Q Consensus 2 ~~~v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFGPv~~v~~y~~~~~eEai~~ 81 (109)
.+||+.++. .| +.+.--....+ . ..|-|+.||+++.+ +..-++.|+||||+-|++|+-++++++|+.
T Consensus 434 ~~Hi~~mr~-~g-r~v~q~~~~~~--~-q~GtFv~Ptl~El~--------~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~ 500 (769)
T COG4230 434 EKHIQTMRS-KG-RLVHQAAAPNS--L-QKGTFVAPTLIELE--------NLDELQREVFGPVLHVVRYKRDELDEVIDQ 500 (769)
T ss_pred HHHHHHHHh-cc-cchhhccCCCc--c-CCceeeCceeEEcC--------CHHHHHHHhccceeEEEEecHHHHHHHHHH
Confidence 578888876 34 43322211111 0 12349999999753 123388899999999999999899999999
Q ss_pred HhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 82 LERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 82 an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
+|.+.||||-+|||+-.+.+.++.+.
T Consensus 501 INatGyGLT~GvHtRideti~~v~~~ 526 (769)
T COG4230 501 INATGYGLTLGVHTRIDETIAHVTER 526 (769)
T ss_pred HhccCcceeeeeecchHHHHHHHHhh
Confidence 99999999999999988888888764
No 133
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=71.94 E-value=5.8 Score=32.97 Aligned_cols=50 Identities=10% Similarity=0.043 Sum_probs=44.3
Q ss_pred cceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 56 VTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 56 ~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
|..|.--+++.|...+ +++|||+.+|.-..+=|=+|.|+|...+++|...
T Consensus 309 w~tEyLd~ilavkvVd--~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~ 358 (417)
T COG0014 309 WDTEYLDLILAVKVVD--SLDEAIAHINTYGSGHSDAIITEDYANAERFVNE 358 (417)
T ss_pred HHHHhhhheeEEEEeC--CHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhh
Confidence 6778888999999999 5699999999988888889999999999998764
No 134
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=69.64 E-value=12 Score=28.54 Aligned_cols=80 Identities=9% Similarity=0.092 Sum_probs=50.3
Q ss_pred HHHHhcCCCcEEEeCCcccCCCCCCCCcceeeceEEecccchhccCCCccccceeeee--cceEEEEecCCCHHHHHHHH
Q 033913 5 MNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFG--PFQIVTEYKQDQLPLVLNAL 82 (109)
Q Consensus 5 v~~~~~~~G~~~l~gG~~~~~~~~~~~~~~v~PTv~~~~~~~~~~~~~~~~~~eEiFG--Pv~~v~~y~~~~~eEai~~a 82 (109)
+++++. -++++++++.... |. --.|.|+. +..+ .-+-. | +|..+.+|++- .|+++++
T Consensus 74 l~~i~~-l~~~~I~~~~~~~----~~---~aSPilV~-d~~h-------~~fg~---~PTgViTlhtFRt~--~Ea~~l~ 132 (215)
T PF07368_consen 74 LKKIKC-LNAKTIVADFENV----PP---PASPILVC-DFTH-------SYFGD---GPTGVITLHTFRTP--KEAIELC 132 (215)
T ss_pred HHHHHh-cCCeEEEecccCC----CC---CCCCEEEc-CCCH-------HHcCC---CCCeEEEEEccCCH--HHHHHHH
Confidence 344444 4788888843211 11 23588764 3221 11111 3 36677889976 9999999
Q ss_pred hc--CCCCceEEEecCCHHHHHHHHH
Q 033913 83 ER--MHAHLTAAVVSNDPLFLQLQLI 106 (109)
Q Consensus 83 n~--~~~gLta~Vfs~d~~~~~~~~~ 106 (109)
+. ++|+ +.+||++....+..++.
T Consensus 133 ~kE~l~f~-SVsiW~ekla~~Yel~~ 157 (215)
T PF07368_consen 133 AKETLPFD-SVSIWNEKLASAYELAA 157 (215)
T ss_pred hcCCCCcc-eEEEeCcHHHHHHHHHH
Confidence 85 5777 67899998888877654
No 135
>PF03295 Pox_TAA1: Poxvirus trans-activator protein A1 C-terminal; InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=61.54 E-value=6.1 Score=24.46 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=28.4
Q ss_pred cccceeeeecceEEEEecCCCHHHHHHHHhcCC--CCceEEEe
Q 033913 54 ELVTREIFGPFQIVTEYKQDQLPLVLNALERMH--AHLTAAVV 94 (109)
Q Consensus 54 ~~~~eEiFGPv~~v~~y~~~~~eEai~~an~~~--~gLta~Vf 94 (109)
-.++||-=--+++++-|++. |++++++|.++ -|.=+++|
T Consensus 7 vALREEPKisLLPLv~Y~~P--e~Vi~iIN~lR~keGvYG~c~ 47 (63)
T PF03295_consen 7 VALREEPKISLLPLVFYEDP--EEVINIINELRNKEGVYGSCY 47 (63)
T ss_pred eeeccCCcceEEeeeeccCH--HHHHHHHHHhhhccCceeEEE
Confidence 34677766677888889987 99999999864 34444454
No 136
>KOG2236 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.22 E-value=9.7 Score=32.17 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=17.9
Q ss_pred ceeeeecce---EEEEecCCCHHHHHH
Q 033913 57 TREIFGPFQ---IVTEYKQDQLPLVLN 80 (109)
Q Consensus 57 ~eEiFGPv~---~v~~y~~~~~eEai~ 80 (109)
--||||||. .|++|.++ +|+..
T Consensus 250 I~EiFGpV~~P~YvvRFnS~--~e~~~ 274 (483)
T KOG2236|consen 250 IFEIFGPVKNPYYVVRFNSE--EEISF 274 (483)
T ss_pred hhhhhcccCCceEEEecCch--hhhhh
Confidence 348999994 79999987 88774
No 137
>PRK13149 H/ACA RNA-protein complex component Gar1; Reviewed
Probab=44.96 E-value=10 Score=23.80 Aligned_cols=8 Identities=38% Similarity=1.107 Sum_probs=6.5
Q ss_pred eeeeecce
Q 033913 58 REIFGPFQ 65 (109)
Q Consensus 58 eEiFGPv~ 65 (109)
.|||||+-
T Consensus 42 ~dIfGPV~ 49 (73)
T PRK13149 42 VDVFGPVK 49 (73)
T ss_pred EEEECCCC
Confidence 48999974
No 138
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=34.97 E-value=27 Score=27.44 Aligned_cols=44 Identities=16% Similarity=0.069 Sum_probs=33.5
Q ss_pred cceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 63 PFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 63 Pv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
|.+-+-+.....+++.|..+|++ .|||..+-|+|...+..++++
T Consensus 172 PtsGLDPI~a~~~~~LI~~L~~~-lg~T~i~VTHDl~s~~~i~Dr 215 (263)
T COG1127 172 PTSGLDPISAGVIDELIRELNDA-LGLTVIMVTHDLDSLLTIADR 215 (263)
T ss_pred CCCCCCcchHHHHHHHHHHHHHh-hCCEEEEEECChHHHHhhhce
Confidence 33334444444689999999997 889988889999998877654
No 139
>PF05389 MecA: Negative regulator of genetic competence (MecA); InterPro: IPR008681 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. This family contains several bacterial MecA proteins. In complex media competence development is poor, and there is little or no expression of late competence genes. Overexpression of MecA inhibits comG transcription [, , ]. MecA enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. ; PDB: 3JTP_C 2Y1R_O 3PXI_c 3PXG_b 3JTO_D 3JTN_A.
Probab=30.78 E-value=92 Score=23.01 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=24.4
Q ss_pred ecceEEEEecCCCHHHHHHHHhcCC-CCceEEEec
Q 033913 62 GPFQIVTEYKQDQLPLVLNALERMH-AHLTAAVVS 95 (109)
Q Consensus 62 GPv~~v~~y~~~~~eEai~~an~~~-~gLta~Vfs 95 (109)
.+...|..|+ +||++|+++..+. +++.++++.
T Consensus 128 ~~~~~v~~F~--dfedvI~la~~l~~~~~~s~LYk 160 (220)
T PF05389_consen 128 ESNTRVFEFD--DFEDVIQLAKRLQDYDVESSLYK 160 (220)
T ss_dssp --EEEEEEES--SHHHHHHHHCHCCHTTEEEEEEE
T ss_pred CccEEEEEcC--CHHHHHHHHhhcccccccchhee
Confidence 3556788999 6799999998864 888887763
No 140
>PRK07229 aconitate hydratase; Validated
Probab=26.83 E-value=98 Score=27.16 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=31.2
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+-- -+.++-..++|= .++|=++++|.-|.....++
T Consensus 193 Ef~G~gv~~-----Ls~~~R~Ti~NM~~E~GA~~~if~~D~~t~~yL 234 (646)
T PRK07229 193 EYFGPGVAT-----LSVPERATITNMGAELGATTSIFPSDERTREFL 234 (646)
T ss_pred EEECccccc-----ccHHHHhhhhccccccCceEEEecCcHHHHHHH
Confidence 778884432 256888899995 78999999998877766554
No 141
>PF04410 Gar1: Gar1/Naf1 RNA binding region; InterPro: IPR007504 H/ACA ribonucleoprotein particles (RNPs) are a family of RNA pseudouridine synthases that specify modification sites through guide RNAs. More than 100 mammalian H/ACA RNAs form an equal number of ribonucleoproteins (RNPs) by associating with the same four core proteins: Cbf5, Gar1, Nhp2 and Nop10. The function of these H/ACA RNPs is essential for biogenesis of the ribosome, splicing of precursor mRNAs (pre-mRNAs), maintenance of telomeres and probably for additional cellular processes []. Recent crystal structures of archaeal H/ACA protein complexes show how the same four proteins accommodate >100 distinct but related H/ACA RNAs []. The complex contains a stable core composed of Cbf5 and Nop10, to which Gar1 and Nhp2 subsequently bind, the complex interacts with snoRNAs []. This entry represents Gar1 and Naf1. Naf1 is an RNA-binding protein required for the maturation of box H/ACA snoRNPs complex and ribosome biogenesis. During assembly of the H/ACA snoRNPs complex, it associates with the complex, disappearing during maturation of the complex being replaced by GAR1 to yield mature H/ACA snoRNPs complex. Naf1 reveals a striking structural homology with the core domain of archaeal Gar1 [].; GO: 0030515 snoRNA binding, 0031120 snRNA pseudouridine synthesis, 0042254 ribosome biogenesis; PDB: 2EY4_C 3MQK_C 2RFK_C 2HVY_B 3HAY_B 3U28_C 3UAI_C 2EQN_A 2V3M_F.
Probab=26.50 E-value=27 Score=24.72 Aligned_cols=15 Identities=33% Similarity=0.758 Sum_probs=10.3
Q ss_pred eeeeecce---EEEEecC
Q 033913 58 REIFGPFQ---IVTEYKQ 72 (109)
Q Consensus 58 eEiFGPv~---~v~~y~~ 72 (109)
.||||||. ..++|..
T Consensus 66 ~eiFGpV~~P~y~Vr~~~ 83 (154)
T PF04410_consen 66 DEIFGPVNNPYYSVRFNS 83 (154)
T ss_dssp EEEESESSS-EEEEE-SC
T ss_pred eeEeCCCCceEEEEEeCC
Confidence 58999984 5666664
No 142
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=26.42 E-value=2.4e+02 Score=23.49 Aligned_cols=50 Identities=12% Similarity=0.207 Sum_probs=38.2
Q ss_pred cceeeeecceEEEEecCCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHHh
Q 033913 56 VTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTAAVVSNDPLFLQLQLIS 107 (109)
Q Consensus 56 ~~eEiFGPv~~v~~y~~~~~eEai~~an~~~~gLta~Vfs~d~~~~~~~~~~ 107 (109)
++.| ||-.-+-+++=+ +.++||..+|..--+=|-.|.|+|.+.+++|...
T Consensus 303 ~~~E-y~~l~~~ievV~-~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~ 352 (433)
T KOG4165|consen 303 FNTE-YGSLECTIEVVD-SVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKH 352 (433)
T ss_pred hhhh-hcchheeeeecc-cHHHHHHHHHhcCCcccceEEecCHHHHHHHHhc
Confidence 4455 555555555554 6799999999988788889999999999988753
No 143
>PRK05478 isopropylmalate isomerase large subunit; Validated
Probab=25.92 E-value=1e+02 Score=26.05 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=30.9
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||.+- +-+.++-..++|= .++|=++++|..|.....++
T Consensus 202 Ef~G~gv~-----~Ls~~~R~Ti~NMa~E~GA~~~i~~~De~t~~yl 243 (466)
T PRK05478 202 EFAGEAIR-----ALSMEGRMTICNMSIEAGARAGLVAPDETTFEYL 243 (466)
T ss_pred EEECcccc-----ccCHHHHhhhhhcccccCceeeeecCCHhHHHHH
Confidence 77888433 2256889999995 78999999998887665544
No 144
>PF07045 DUF1330: Protein of unknown function (DUF1330); InterPro: IPR010753 This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.; PDB: 2FIU_B 3HHL_A 3DCA_D 3LO3_I.
Probab=25.82 E-value=22 Score=21.28 Aligned_cols=23 Identities=4% Similarity=-0.078 Sum_probs=18.0
Q ss_pred cceEEEEecCCCHHHHHHHHhcCCC
Q 033913 63 PFQIVTEYKQDQLPLVLNALERMHA 87 (109)
Q Consensus 63 Pv~~v~~y~~~~~eEai~~an~~~~ 87 (109)
..++|++|.|. +.+.+..|+-+|
T Consensus 39 ~~~viieFPs~--~aa~~~~~speY 61 (65)
T PF07045_consen 39 DRVVIIEFPSM--EAAKAWYNSPEY 61 (65)
T ss_dssp SEEEEEEESSH--HHHHHHHCSHHH
T ss_pred CeEEEEECCCH--HHHHHHHCCHhH
Confidence 45679999954 999998887655
No 145
>PLN00070 aconitate hydratase
Probab=25.34 E-value=89 Score=28.80 Aligned_cols=41 Identities=17% Similarity=0.017 Sum_probs=31.1
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+-=+ +.++-..++|= .+||=|+++|--|.....++
T Consensus 321 EF~G~Gv~~L-----Sv~dRaTIaNMa~E~GAt~g~FP~De~T~~YL 362 (936)
T PLN00070 321 EFYGEGMSEL-----SLADRATIANMSPEYGATMGFFPVDHVTLQYL 362 (936)
T ss_pred EEeCCccccC-----CHhHHhhHhhcchhhCceeeEecCChHHHHHH
Confidence 7888854422 56888889995 68999999998777666543
No 146
>TIGR01341 aconitase_1 aconitate hydratase 1. This model represents one form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It is found in bacteria, archaea, and eukaryotic cytosol. It has been shown to act also as an iron-responsive element binding protein in animals and may have the same role in other eukaryotes.
Probab=23.88 E-value=1e+02 Score=28.22 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=30.8
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+-=+ +.++-..++|= .+||=++++|.-|.....++
T Consensus 269 EF~G~gv~~L-----S~~dRaTIaNMa~E~GAt~g~fp~De~T~~YL 310 (876)
T TIGR01341 269 EFFGPGLSEL-----SLADRATIANMAPEYGATCGFFPIDDVTLQYL 310 (876)
T ss_pred EEeCcccccc-----CHhHHhhhhhcchhhCceEEEEcCChhHHHHH
Confidence 7888844322 56888889995 68999999998777665543
No 147
>PRK12881 acnA aconitate hydratase; Provisional
Probab=22.70 E-value=1.1e+02 Score=28.04 Aligned_cols=41 Identities=17% Similarity=-0.032 Sum_probs=31.2
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+-= -+.++-..++|= .+||=|+++|.-|.....++
T Consensus 286 EF~G~gv~~-----LS~~dRaTIaNMa~E~GAt~g~fp~De~T~~YL 327 (889)
T PRK12881 286 EFFGEGVAS-----LTLGDRATIANMAPEYGATMGFFPVDEQTLDYL 327 (889)
T ss_pred EEECccccc-----cCHHHHHHHhcccHhhCceEEEecCChhHHHHH
Confidence 788885432 256888889995 68999999998777766544
No 148
>PRK09277 aconitate hydratase; Validated
Probab=21.52 E-value=1.3e+02 Score=27.71 Aligned_cols=41 Identities=17% Similarity=0.001 Sum_probs=30.9
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+--+ +.++-..++|= .+||=++++|.-|.....++
T Consensus 286 EF~G~gv~~L-----S~~dRaTIaNMa~E~GAt~g~fp~De~T~~YL 327 (888)
T PRK09277 286 EFFGEGLASL-----SLADRATIANMAPEYGATCGFFPIDEETLDYL 327 (888)
T ss_pred EEECcccccC-----CHHHHHHHhccchhhCceEEEecCChhHHHHH
Confidence 7888844322 56888889995 68999999998777666544
No 149
>PF03795 YCII: YCII-related domain; InterPro: IPR005545 The majority of proteins in this group contain a single copy of this domain, though it is also found as a repeat (e.g. in Q9AJZ7 from SWISSPROT). A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This entry also covers what was previously known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in Q9A8M4 from SWISSPROT, suggesting that this domain may plays a role in transcription initiation. This domain is named after the most conserved motif in the alignment.; PDB: 1S7I_A 1MWQ_A.
Probab=21.26 E-value=49 Score=20.63 Aligned_cols=30 Identities=17% Similarity=0.118 Sum_probs=19.4
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhcCCCCceE
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALERMHAHLTA 91 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~~~~gLta 91 (109)
|..|=+ .|+..+ |.+||.+++++-||-..+
T Consensus 55 ~~~gg~-~i~~a~--s~e~A~~~~~~dP~~~~g 84 (95)
T PF03795_consen 55 EFIGGF-IIVEAE--SREEAEEIAKEDPFVKAG 84 (95)
T ss_dssp SEEEEE-EEEEES--SHHHHHHHHCT-HHHHCT
T ss_pred cceeEE-EEEEeC--CHHHHHHHHHhCCccccC
Confidence 455533 345666 569999999988766543
No 150
>PTZ00092 aconitate hydratase-like protein; Provisional
Probab=21.13 E-value=1.2e+02 Score=27.81 Aligned_cols=41 Identities=17% Similarity=0.045 Sum_probs=30.9
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||-+-=+ +.++-..++|= .+||=++++|.-|.....++
T Consensus 289 EF~G~gv~~L-----Sv~dRaTIaNMa~E~GAt~gifp~De~T~~YL 330 (898)
T PTZ00092 289 EFYGPGVKTL-----SLADRATIANMAPEYGATMGFFPIDEKTLDYL 330 (898)
T ss_pred EEEccccccC-----cHHHhhhhhccccccCceEEEecCChhHHHHH
Confidence 7899854422 56888889995 68999999998777665544
No 151
>cd01583 IPMI 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate. Aconatase-like catalytic domain of 3-isopropylmalate dehydratase and related uncharacterized proteins. 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate 3-isopropylmalate. IPMI is involved in fungal and bacterial leucine biosynthesis and is also found in eukaryotes.
Probab=20.59 E-value=1.6e+02 Score=24.17 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=31.0
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.+||.+- +-+.++-..++|= .++|=++++|..|.....++
T Consensus 166 Ef~G~~v~-----~Ls~~~R~Ti~NMa~E~GA~~gi~~~De~t~~yL 207 (382)
T cd01583 166 EFAGEAIE-----SLSMEERMTLCNMAIEAGAKAGIVAPDETTFEYL 207 (382)
T ss_pred EEEcCccc-----cCCHHHHhhHhccccccCceEEEecCChHHHHHH
Confidence 77887432 2267899999995 78999999998887766544
No 152
>cd01584 AcnA_Mitochondrial Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Mitochondrial aconitase A catalytic domain. Aconitase (also known as aconitate hydratase and citrate hydro-lyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediary product during the course of the reaction. In eukaryotes two isozymes of aconitase are known to exist: one found in the mitochondrial matrix and the other found in the cytoplasm. This is the mitochondrial form. The mitochondrial product is coded by a nuclear gene. Most members of this subfamily are mitochondrial but there are some bacterial members.
Probab=20.45 E-value=1.2e+02 Score=25.15 Aligned_cols=41 Identities=15% Similarity=0.008 Sum_probs=30.4
Q ss_pred eeeecceEEEEecCCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHH
Q 033913 59 EIFGPFQIVTEYKQDQLPLVLNALER-MHAHLTAAVVSNDPLFLQLQ 104 (109)
Q Consensus 59 EiFGPv~~v~~y~~~~~eEai~~an~-~~~gLta~Vfs~d~~~~~~~ 104 (109)
|.|||.+- +-+.++-..++|= .++|=++++|.-|.....++
T Consensus 172 Ef~G~gi~-----~Ls~~~R~Ti~NMa~E~GA~~gi~~~D~~t~~yl 213 (412)
T cd01584 172 EYFGPGVD-----SLSCTGMGTICNMGAEIGATTSVFPYNERMKKYL 213 (412)
T ss_pred EEECcccc-----cCChhhhcchhhcchhhCceEEEecCChhHHHHH
Confidence 78888433 2256888999995 78999999998776555443
Done!