BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033918
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/86 (98%), Positives = 86/86 (100%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY+ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 90/96 (93%), Gaps = 4/96 (4%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGII----VGDLNSF 92
IWDTAGQERFRTITSSYYRGAHGII V DL SF
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESF 96
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/96 (91%), Positives = 90/96 (93%), Gaps = 4/96 (4%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGII----VGDLNSF 92
IWDTAGQERFRTITSSYYRGAHGII V DL SF
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESF 96
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/86 (96%), Positives = 86/86 (100%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGII+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIII 86
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 83/86 (96%), Positives = 86/86 (100%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY+ESYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGII+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIII 86
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans
GN=YPT1 PE=3 SV=1
Length = 201
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1
SV=3
Length = 205
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1
SV=1
Length = 201
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/86 (94%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRT+TSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTVTSSYYRGAHGIIV 86
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 83/86 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2
SV=1
Length = 205
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/86 (94%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP+YDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 4 MNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIV 89
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/86 (95%), Positives = 83/86 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRTVE DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ypt-1 PE=3 SV=1
Length = 203
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/96 (86%), Positives = 88/96 (91%), Gaps = 4/96 (4%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGII----VGDLNSF 92
IWDTAGQERFRTITSSYYRGAHGI V D++SF
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSF 96
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/86 (94%), Positives = 83/86 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+E DGKTIKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQER RTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERGRTITSSYYRGAHGIIV 86
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/86 (91%), Positives = 83/86 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT E +GKT+KLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGII+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIII 86
>sp|P34140|RAB1B_DICDI Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B
PE=2 SV=2
Length = 206
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 80/86 (93%), Positives = 82/86 (95%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y ESYISTIGVDFKIRT+ DGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/86 (91%), Positives = 84/86 (97%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+YI+SYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGII+
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIII 86
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/86 (90%), Positives = 83/86 (96%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP+Y YLFKLLLIGDSGVGKSCLLLRFADD+Y ES+ISTIGVDFKIRT+E +GKTIKLQ
Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGAHGIIV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 86/96 (89%), Gaps = 4/96 (4%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M+ E+DYLFKLLLIGDS VGKSC LLRFADDSY++SYISTIGVDFKIRTVE +GKT+KLQ
Sbjct: 1 MSNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGII----VGDLNSF 92
IWDTAGQERFRTITSSYYRGAHGII + D+ SF
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESF 96
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/86 (86%), Positives = 81/86 (94%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MN EYDYLFKLLLIG+SGVGKSCLLLRF+DD+Y YISTIGVDFKI+TVE DGKT+KLQ
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRG+HGII+
Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIII 86
>sp|Q92928|RAB1C_HUMAN Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5
SV=2
Length = 201
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 76/86 (88%), Positives = 79/86 (91%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
MNP YD LFKLLLIGDSGVGKSCLLLRFADD Y ESYISTIGVDFKI+T+E DGKTIKLQ
Sbjct: 1 MNPGYDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERF TITSSYYRGAHG +V
Sbjct: 61 IWDTAGQERFWTITSSYYRGAHGFLV 86
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 80/86 (93%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M PE+D+ FK+LLIGDSGVGKSCLLLRFADDS+ +++ISTIGVDFKI+T+ DGKTIKLQ
Sbjct: 3 MAPEHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQ 62
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITSSYYRGA GII+
Sbjct: 63 IWDTAGQERFRTITSSYYRGAQGIIL 88
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 85/99 (85%), Gaps = 3/99 (3%)
Query: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQI 61
+PEYD L K+L+IGDSGVGKSC+LLRFAD+ + +SYISTIGVDF IRT+E DGK IKLQI
Sbjct: 27 HPEYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQI 86
Query: 62 WDTAGQERFRTITSSYYRGAHG-IIVGDLNSFLQQSFSS 99
WDTAGQERF+TIT+SYYRGAHG IIV D+ S SF+S
Sbjct: 87 WDTAGQERFKTITTSYYRGAHGLIIVYDITSM--DSFNS 123
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 76/82 (92%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D TIKLQIWD
Sbjct: 3 EYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWD 62
Query: 64 TAGQERFRTITSSYYRGAHGII 85
TAGQERFRTITS+YYRGAHGII
Sbjct: 63 TAGQERFRTITSTYYRGAHGII 84
>sp|Q4UB16|RAB1_THEAN Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1
Length = 220
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 76/83 (91%)
Query: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIW 62
EYDYLFK+++IGDSG GKS LLLRFAD++Y ESY+STIGVDFKI+TV+ D TIKLQIW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 63 DTAGQERFRTITSSYYRGAHGII 85
DTAGQERFRTITS+YYRGAHGII
Sbjct: 62 DTAGQERFRTITSTYYRGAHGII 84
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 76/85 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRTVE DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGII 85
IWDTAGQERFRTIT++YYRGA GI+
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIM 85
>sp|Q5U316|RAB35_RAT Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2
SV=1
Length = 201
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQ
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITS+YYRG HG+IV
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIV 86
>sp|Q6PHN9|RAB35_MOUSE Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1
Length = 201
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQ
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITS+YYRG HG+IV
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIV 86
>sp|Q15286|RAB35_HUMAN Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1
Length = 201
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M +YD+LFKLL+IGDSGVGKS LLLRFAD+++ SYI+TIGVDFKIRTVE +G+ +KLQ
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTITS+YYRG HG+IV
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIV 86
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTIT++YYRGA GI++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIML 86
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTIT++YYRGA GI++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIML 86
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTIT++YYRGA GI++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIML 86
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1
SV=1
Length = 207
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTIT++YYRGA GI++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIML 86
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 77/86 (89%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
IWDTAGQERFRTIT++YYRGA GI++
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIML 86
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 76/82 (92%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E DGK IKLQIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 65 AGQERFRTITSSYYRGAHGIIV 86
AGQERFRTIT++YYRGA GI++
Sbjct: 66 AGQERFRTITTAYYRGAMGILL 87
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2
SV=2
Length = 203
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 78/86 (90%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
+WDTAGQERF+TIT++YYRGA GII+
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIIL 86
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 80/93 (86%), Gaps = 4/93 (4%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGII----VGDLNSF 92
TAGQERFRTIT++YYRGA GI+ V D +SF
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSF 103
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 78/86 (90%)
Query: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQ 60
M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQ 60
Query: 61 IWDTAGQERFRTITSSYYRGAHGIIV 86
+WDTAGQERF+TIT++YYRGA GII+
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIIL 86
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/93 (74%), Positives = 80/93 (86%), Gaps = 4/93 (4%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGII----VGDLNSF 92
TAGQERFRTIT++YYRGA GI+ V D +SF
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSF 103
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 76/82 (92%)
Query: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 65 AGQERFRTITSSYYRGAHGIIV 86
AGQERFRTIT++YYRGA GI++
Sbjct: 72 AGQERFRTITTAYYRGAMGILL 93
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 76/83 (91%)
Query: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
+YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 64 TAGQERFRTITSSYYRGAHGIIV 86
TAGQERFRTIT++YYRGA GI++
Sbjct: 71 TAGQERFRTITTAYYRGAMGILL 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,088,164
Number of Sequences: 539616
Number of extensions: 1359797
Number of successful extensions: 8157
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 6771
Number of HSP's gapped (non-prelim): 1139
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)