BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033920
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38783|FYV4_YEAST Protein FYV4, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FYV4 PE=1 SV=1
Length = 130
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 14 SMVAVSGFSRFFTS--KASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTR 71
S+ A RF ++ K S+Q + FLN IG+ E+ ++ L
Sbjct: 17 SLAAPKAAYRFSSTIPKPSDQV---PDVDAFLNKIGRNCNELKDTFEN---NWNNLFQWD 70
Query: 72 TLKLKKLGIPCKHRKLILKHTHKYR 96
+ LK+ G+ + RK ILK H YR
Sbjct: 71 SKILKEKGVNIQQRKYILKQVHNYR 95
>sp|Q75EY2|FYV4_ASHGO Protein FYV4, mitochondrial OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FYV4 PE=3
SV=1
Length = 122
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 42 FLNGIGKGVETHSAKLESEIGDFQRLLVTRTLKLKKLGIPCKHRKLILKHTHKYRLG 98
FL IG+ H+ E++ ++ L + KLK+ G+P + R+ IL+ + R G
Sbjct: 34 FLAKIGRQCSEHAELYENK---WENLFMWDGPKLKEKGVPVQQRRYILQQVERLRQG 87
>sp|Q6BIH5|FYV4_DEBHA Protein FYV4, mitochondrial OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=FYV4 PE=3 SV=1
Length = 162
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 14 SMVAVSGFSRFFTSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIGDFQRLLVTRTL 73
S A+S + TS N + ++ F IG+ H ES D Q+ L T +
Sbjct: 31 SASAISLKTNTSTSTKENVHDLET----FFKLIGRDCIEHLDAFES---DLQKFLKTSSK 83
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGL 99
+K +GI R+ +L+ HK++ L
Sbjct: 84 DMKNMGIDVSTRRYMLRWIHKFQNDL 109
>sp|A2RRT3|FB31A_XENLA F-box only protein 31-A OS=Xenopus laevis GN=fbxo31-a PE=2 SV=1
Length = 519
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAP 106
KL+ G+ C + L H +++ LGLW+P P
Sbjct: 113 KLEVTGVSCHDVYVKLLHQYRHILGLWQPDIGP 145
>sp|A2BD94|FB31B_XENLA F-box only protein 31-B OS=Xenopus laevis GN=fbxo31-b PE=2 SV=1
Length = 523
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAP 106
KL+ G+ C + L H +++ LGLW+P P
Sbjct: 118 KLEVTGVSCHDVYVKLLHQYRHILGLWQPDIGP 150
>sp|Q5XUX0|FBX31_HUMAN F-box only protein 31 OS=Homo sapiens GN=FBXO31 PE=1 SV=2
Length = 539
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAP 106
KL+ G+ C+ L H +++ LGLW+P P
Sbjct: 123 KLEITGVSCRDVYAKLLHRYRHILGLWQPDIGP 155
>sp|B2RYN2|FBX31_RAT F-box only protein 31 OS=Rattus norvegicus GN=Fbxo31 PE=2 SV=1
Length = 507
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAP 106
KL+ G+ C+ L H +++ LGLW+P P
Sbjct: 109 KLEITGVSCRDVYAKLLHRYRHILGLWQPDIGP 141
>sp|Q3TQF0|FBX31_MOUSE F-box only protein 31 OS=Mus musculus GN=Fbxo31 PE=1 SV=1
Length = 507
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 74 KLKKLGIPCKHRKLILKHTHKYRLGLWRPRAAP 106
KL+ G+ C+ L H +++ LGLW+P P
Sbjct: 109 KLEITGVSCRDVYAKLLHRYRHILGLWQPDIGP 141
>sp|O31526|YESW_BACSU Rhamnogalacturonan endolyase YesW OS=Bacillus subtilis (strain 168)
GN=yesW PE=1 SV=1
Length = 620
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 18/79 (22%)
Query: 41 EFLNGIGKGVETHSA-----------KLESEI-GDFQRLLVTRT-----LKLKKLGIPCK 83
++ NG+ K + T S L++++ GD++ +V RT L++ IP +
Sbjct: 513 DYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDWREEVVWRTEDSSALRIYTTTIPTE 572
Query: 84 HRKLILKHTHKYRLGL-WR 101
HR L H YRLG+ W+
Sbjct: 573 HRLYTLMHDPVYRLGIAWQ 591
>sp|Q58595|LEU1_METJA 2-isopropylmalate synthase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=leuA PE=1 SV=1
Length = 518
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 9 NAGANSMVAVSGFSRFFTSKASNQYIVKVGIPEFLNGIGK 48
+A A +V + G+ R T+KA+++ IV+ + ++GI K
Sbjct: 472 DALAEVIVTLEGYGREITTKAASEDIVRASVEAVIDGINK 511
>sp|Q81T62|HISX_BACAN Histidinol dehydrogenase OS=Bacillus anthracis GN=hisD PE=3 SV=1
Length = 429
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 10 AGANSMVAVSGFSRFFTSKASNQYIVKVGIPEFLNGIGKGVETHSAKLESEIG 62
AG N ++ SG +RFF+ + + ++ K + G + V+ H +L ++ G
Sbjct: 361 AGPNHVLPTSGTARFFSPLSVDDFVKKSSFLSYTEGALRDVKHHIVELANKEG 413
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,398,446
Number of Sequences: 539616
Number of extensions: 1318254
Number of successful extensions: 2783
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2776
Number of HSP's gapped (non-prelim): 12
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)