BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033924
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1
Length = 186
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/104 (87%), Positives = 96/104 (92%), Gaps = 1/104 (0%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
MYRKQHKKDIA EAVKK+RR+TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI
Sbjct: 56 MYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 115
Query: 61 KERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKGAA-PKGPKLGG 103
KERIKKTKDEK+AKKAEVT K+Q KGS+ KG A PKGPKLGG
Sbjct: 116 KERIKKTKDEKKAKKAEVTKSQKSQGKGSIAKGGAQPKGPKLGG 159
>sp|Q42347|RL241_ARATH 60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1
SV=2
Length = 164
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 90/102 (88%), Gaps = 1/102 (0%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREI
Sbjct: 56 MYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115
Query: 61 KERIKKTKDEKRAKKAEVTSK-SKTQSKGSMPKGAAPKGPKL 101
KERIKKTKDEK+AKK E SK K+Q KG++PK AAPK K+
Sbjct: 116 KERIKKTKDEKKAKKVEYASKQQKSQVKGNIPKSAAPKAAKM 157
>sp|O65743|RL24_CICAR 60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1
Length = 164
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 89/95 (93%), Gaps = 1/95 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
M+RKQHKKD A EAVKK+RR+TKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREI
Sbjct: 56 MFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREI 115
Query: 61 KERIKKTKDEKRAKKAEVTSKS-KTQSKGSMPKGA 94
KERIKKTKDEK+AKKAEV SK+ K+Q KG++ KGA
Sbjct: 116 KERIKKTKDEKKAKKAEVASKAQKSQGKGNVQKGA 150
>sp|P38666|RL242_ARATH 60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2
SV=2
Length = 163
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
MYRKQHKKD A EAVK++RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREI
Sbjct: 56 MYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115
Query: 61 KERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKGAA 95
KERIKKTKDEK+AKK E SK + + K + PK AA
Sbjct: 116 KERIKKTKDEKKAKKVEFASKQQ-KVKANFPKAAA 149
>sp|P50888|RL24_HORVU 60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1
Length = 162
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 79/85 (92%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
MYRKQHKKDI AEA KK+RR+TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREI
Sbjct: 56 MYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREI 115
Query: 61 KERIKKTKDEKRAKKAEVTSKSKTQ 85
KERIKKTKDEK+AKKAEVT K+Q
Sbjct: 116 KERIKKTKDEKKAKKAEVTKSQKSQ 140
>sp|Q7SDU2|RL24_NEUCR 60S ribosomal protein L24 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rpl-24
PE=3 SV=1
Length = 156
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA++E
Sbjct: 54 LYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIKES 112
Query: 61 KERIKKTK 68
K + ++T+
Sbjct: 113 KAKKQETQ 120
>sp|Q6BNC2|RL24_DEBHA 60S ribosomal protein L24 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPL24 PE=3 SV=1
Length = 156
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREA 55
+YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+
Sbjct: 54 LYRRQHKKGISEESAKRRTRKTVKN-QRAIVGASLELIKERRSQKPSDRKAARDV 107
>sp|Q6FXY9|RL24_CANGA 60S ribosomal protein L24 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL24
PE=3 SV=1
Length = 155
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 53
+YR+ HKK I E KK+ R T K R+IVGA+LE+I++RR+ KPEVR A R
Sbjct: 54 LYRRHHKKGITEEVAKKRSRKTVKA-QRAIVGASLELIKERRSLKPEVRKAKR 105
>sp|P38665|RL24_KLULA 60S ribosomal protein L24 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL24 PE=3 SV=1
Length = 155
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%), Gaps = 6/100 (6%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR+ HKK I E +K+ R + K R++VGA+LE+I++RR+ KPEVR A R+ +
Sbjct: 54 LYRRHHKKGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVRKAQRDEKKKAD 112
Query: 61 KERIKKTKDEKRAKKAEVTSK-----SKTQSKGSMPKGAA 95
KE+ K K ++++KA++ + SK Q+KG+ K AA
Sbjct: 113 KEKKKADKAARKSEKAKLAAAQGSKVSKQQAKGAFQKVAA 152
>sp|Q9VJY6|RL24_DROME 60S ribosomal protein L24 OS=Drosophila melanogaster GN=RpL24 PE=1
SV=1
Length = 155
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR++H+K I EA KK+ R T+K + R+IVGA+L I +R KPEVR A R+ A++
Sbjct: 54 LYRRKHRKGIEEEASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVA 112
Query: 61 KER 63
KE+
Sbjct: 113 KEQ 115
>sp|P24000|RL24B_YEAST 60S ribosomal protein L24-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24B PE=1 SV=1
Length = 155
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A RE L+
Sbjct: 54 LFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANREEKLK 110
>sp|Q752U6|RL24_ASHGO 60S ribosomal protein L24 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL24 PE=3 SV=1
Length = 155
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 53
+YR+ HKK I E KK+ R T K R++VGA+LE+I++RR+ KPE+R A R
Sbjct: 54 LYRRHHKKGITEEVAKKRSRKTVKA-QRAVVGASLELIKERRSLKPEIRKAKR 105
>sp|Q9DFQ7|RL24_GILMI 60S ribosomal protein L24 OS=Gillichthys mirabilis GN=rpl24 PE=2
SV=2
Length = 157
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALRE 59
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEVTKKRTRRAVK--FQRAITGASLAEIMAKRNQKPEVRKAQREQAIRA 111
Query: 60 IKERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKGAAPKGPKLGG 103
KE K + K+ A + +KT K + K P++GG
Sbjct: 112 AKESKKAKQATKKPAAASAKTSAKTAQKPKIAKPMKISAPRVGG 155
>sp|Q6F444|RL24_PLUXY 60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1
Length = 155
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A RE A+++
Sbjct: 54 LYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQREQAIKQA 112
Query: 61 KER 63
KE+
Sbjct: 113 KEQ 115
>sp|P04449|RL24A_YEAST 60S ribosomal protein L24-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL24A PE=1 SV=1
Length = 155
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 53
++RK HKK I E KK+ R T K R I GA+L++I++RR+ KPEVR A R
Sbjct: 54 LFRKHHKKGITEEVAKKRSRKTVKA-QRPITGASLDLIKERRSLKPEVRKANR 105
>sp|Q92354|RL24A_SCHPO 60S ribosomal protein L24-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24a PE=3 SV=1
Length = 149
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 8/77 (10%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL
Sbjct: 54 LYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAAL--- 109
Query: 61 KERIKKTKDEKRAKKAE 77
K+ KD+K A ++E
Sbjct: 110 ----KQRKDKKAASESE 122
>sp|Q962T5|RL24_SPOFR 60S ribosomal protein L24 OS=Spodoptera frugiperda GN=RpL24 PE=2
SV=1
Length = 155
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A R+ A++
Sbjct: 54 LYRRKFKKGQEEEQTKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQRDQAIKAA 112
Query: 61 KER 63
KE+
Sbjct: 113 KEQ 115
>sp|Q6C4U6|RL24_YARLI 60S ribosomal protein L24 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPL24 PE=3 SV=1
Length = 155
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAR 53
+YR++HKK I E KK+ R + K R IVGA+L+VI+++R +PE R+A R
Sbjct: 54 LYRRKHKKGITEEVSKKRSRKSVKAV-RGIVGASLDVIKEKRNARPETRNATR 105
>sp|O74884|RL24B_SCHPO 60S ribosomal protein L24-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl24b PE=1 SV=1
Length = 149
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++
Sbjct: 54 LYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQR 112
Query: 61 KE 62
K+
Sbjct: 113 KD 114
>sp|Q8JGR4|RL24_DANRE 60S ribosomal protein L24 OS=Danio rerio GN=rpl24 PE=2 SV=1
Length = 157
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEVSKKRTRRAVK--FQRAITGASLAEILAKRNQKPEVRKAQREQAIR 110
>sp|P83732|RL24_RAT 60S ribosomal protein L24 OS=Rattus norvegicus GN=Rpl24 PE=1 SV=1
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q8BP67|RL24_MOUSE 60S ribosomal protein L24 OS=Mus musculus GN=Rpl24 PE=2 SV=2
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|P61122|RL24_MACFA 60S ribosomal protein L24 OS=Macaca fascicularis GN=RPL24 PE=2 SV=1
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|P83731|RL24_HUMAN 60S ribosomal protein L24 OS=Homo sapiens GN=RPL24 PE=1 SV=1
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q66WF5|RL24_FELCA 60S ribosomal protein L24 OS=Felis catus GN=RPL24 PE=2 SV=1
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q862I1|RL24_BOVIN 60S ribosomal protein L24 OS=Bos taurus GN=RPL24 PE=2 SV=2
Length = 157
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE A+R
Sbjct: 54 LYRRKHKKGQSEEIQKKRTRRAVK--FQRAITGASLADIMAKRNQKPEVRKAQREQAIR 110
>sp|Q8ISQ3|RL24_BRABE 60S ribosomal protein L24 OS=Branchiostoma belcheri GN=RPL24 PE=2
SV=1
Length = 154
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 14/108 (12%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+YR++HKK E KK+ R T K + R+I GA+L I +R +KPEVR A RE A++
Sbjct: 54 LYRRKHKKGQQEEIQKKRSRRTAK-FQRAITGASLTEIMAKRNQKPEVRKAQREQAVKAA 112
Query: 61 KERIKKTKDEKRAKKAEVTSKSKTQSKGSMPKGAAPK-----GPKLGG 103
KE+ K + KR K+ +++ + PK APK P++GG
Sbjct: 113 KEKKKADQVGKR--------KAPAKARATAPKTKAPKTVKAAAPRVGG 152
>sp|Q54VN6|RL24_DICDI 60S ribosomal protein L24 OS=Dictyostelium discoideum GN=rpl24 PE=3
SV=1
Length = 127
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 28 RSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
R+IVGA+LEVIQ++R +KPEV+ AA E A REI
Sbjct: 80 RNIVGASLEVIQQKRAQKPEVKQAAAEQAKREI 112
>sp|Q6Y263|RL24_PAGMA 60S ribosomal protein L24 OS=Pagrus major GN=rpl24 PE=2 SV=1
Length = 157
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 1 MYRKQHKKDIAAEAVKKK-RRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAARE 54
+YR++HKK + E KK+ RR+ K + R+I GA+L I +R +KPEVR A RE
Sbjct: 54 LYRRKHKKGQSEEVAKKRTRRAVK--FQRAITGASLAEIMAKRNQKPEVRKAQRE 106
>sp|Q90YU3|RL24_ICTPU 60S ribosomal protein L24 OS=Ictalurus punctatus GN=rpl24 PE=2 SV=1
Length = 157
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAARE 54
+YR++HKK + E KK+ R K + R+I GA+L I +R +KPEVR A RE
Sbjct: 54 LYRRKHKKGQSEEVTKKRTRRAVK-FQRAITGASLAEILAKRNQKPEVRKAQRE 106
>sp|Q7Z0T8|RL24_SCHJA 60S ribosomal protein L24 OS=Schistosoma japonicum GN=RPL24 PE=2
SV=1
Length = 156
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALR 58
+YR+++KK ++ E K + K +R I GA+L I +R +KPEVR A R+ A+R
Sbjct: 54 LYRRKYKKGMSEEQTKNELSVLTKT-ARGIAGASLAEIMAKRNQKPEVRKAMRDQAIR 110
>sp|O42668|TPR1_SCHPO Tetratricopeptide repeat protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tpr1 PE=1 SV=1
Length = 1039
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 13 EAVKKKRRSTKKPYSRSI---------VGATLEVIQKRRTEKPEVRDAAREAALREIKER 63
+ K + +TK+ R+I V A LE + +R ++ R A EA L+E +ER
Sbjct: 840 QRAKMAKNTTKRQLERAIQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQER 899
Query: 64 IKKTKDEKRAKKAEVTSKSKTQSKGS 89
++ ++E++ + EV K+Q K S
Sbjct: 900 ERQLQEERQKMQEEVLEWRKSQQKAS 925
>sp|P39098|MA1A2_MOUSE Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB OS=Mus musculus
GN=Man1a2 PE=2 SV=1
Length = 641
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 51 AAREAALREIKERIKKTKDEKRAK----KAEVTSKSKTQSKGSMPKGAAPKGPKLGGG 104
A E AL E KE+++K+++E RA+ K +V KT+ +P P+ + GG
Sbjct: 113 ADHEKALEEAKEKLRKSREEIRAEIQTEKNKVAQAMKTKETRVLPPVPVPQRVGVSGG 170
>sp|P0DJ54|RL24_TETTS 60S ribosomal protein L24 OS=Tetrahymena thermophila (strain SB210)
GN=RPL24 PE=1 SV=1
Length = 158
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 1 MYRKQHKKDIAAEAVKKKRRSTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREI 60
+++K DIA + KKKR T +R+IVG +LE I +R+ + A E A+RE+
Sbjct: 60 LWKKVKATDIAQK--KKKRNVT---VARAIVGISLEEINRRKNLDASHKKAEAEKAVREL 114
Query: 61 KERIKKTKDEKRA 73
K++ ++KRA
Sbjct: 115 KQKKANDIEKKRA 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.123 0.322
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,418,567
Number of Sequences: 539616
Number of extensions: 1216611
Number of successful extensions: 11860
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 561
Number of HSP's that attempted gapping in prelim test: 10520
Number of HSP's gapped (non-prelim): 1673
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)