BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033926
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4K5T2|CGL_ARATH Bifunctional cystathionine gamma-lyase/cysteine synthase
OS=Arabidopsis thaliana GN=DES1 PE=1 SV=1
Length = 323
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/69 (85%), Positives = 64/69 (92%)
Query: 1 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAE 60
MED+ IK DVTELIG+TPMVYLN +VDGCVA IAAKLEMM+PCSS+KDRIAYSMIKDAE
Sbjct: 1 MEDRVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAE 60
Query: 61 DKGLITPGK 69
DKGLITPGK
Sbjct: 61 DKGLITPGK 69
>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=1 SV=1
Length = 325
Score = 115 bits (288), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/66 (80%), Positives = 59/66 (89%)
Query: 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKG 63
K I KDVTELIG+TP+VYLN VVDGCVA +AAKLEMM+PCSSVKDRI YSMI DAE+KG
Sbjct: 5 KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKG 64
Query: 64 LITPGK 69
LITPG+
Sbjct: 65 LITPGE 70
>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1
Length = 325
Score = 112 bits (279), Expect = 9e-25, Method: Composition-based stats.
Identities = 52/67 (77%), Positives = 59/67 (88%)
Query: 3 DKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDK 62
+K I KDVTELIG+TP+VYLNNVVDGCVA +AAKLE M+PCSSVKDRI YSMI DAE+K
Sbjct: 4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEK 63
Query: 63 GLITPGK 69
GLI PG+
Sbjct: 64 GLIKPGE 70
>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2
SV=2
Length = 321
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I KDVTELIG+TP+VYLN V DGCV +AAKLE M+PCSSVKDRI YSMI DAE+KGLIT
Sbjct: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64
Query: 67 PGK 69
PGK
Sbjct: 65 PGK 67
>sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1
Length = 322
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
I KDVTELIG+TP+VYLNNV +GCV +AAKLEMM+PCSSVKDRI +SMI DAE KGL
Sbjct: 3 SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGL 62
Query: 65 ITPGK 69
I PG+
Sbjct: 63 IKPGE 67
>sp|P47998|CYSK1_ARATH Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2
Length = 322
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
I KDVTELIG+TP+VYLNNV +GCV +AAKLEMM+PCSSVKDRI +SMI DAE KGL
Sbjct: 3 SRIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGL 62
Query: 65 ITPGK 69
I PG+
Sbjct: 63 IKPGE 67
>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1
Length = 325
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/69 (72%), Positives = 57/69 (82%)
Query: 1 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAE 60
+E+K I KDVTELIG TP+VYLN V DGCVA +AAKLE M+PCSSVKDRI +SMI DAE
Sbjct: 2 VEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAE 61
Query: 61 DKGLITPGK 69
GLITPG+
Sbjct: 62 KSGLITPGE 70
>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2
SV=1
Length = 325
Score = 107 bits (267), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/68 (75%), Positives = 56/68 (82%)
Query: 2 EDKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAED 61
E I DVT LIG+TP+VYLN VVDGC A IAAKLE+M+PCSSVKDRI YSMI DAE+
Sbjct: 3 ESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEE 62
Query: 62 KGLITPGK 69
KGLITPGK
Sbjct: 63 KGLITPGK 70
>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1
Length = 325
Score = 106 bits (265), Expect = 4e-23, Method: Composition-based stats.
Identities = 48/63 (76%), Positives = 53/63 (84%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I KDVTELIG+TP+VYLN V DGCV +AAKLE M+PCSSVKDRI YSMI DAE+KG I
Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIV 68
Query: 67 PGK 69
PGK
Sbjct: 69 PGK 71
>sp|O23735|CYSK2_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1
Length = 324
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 1 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAE 60
M + I DVTELIG+TP+VYLN+V +GCV +AAKLEMM+PCSSVKDRI +SMI DAE
Sbjct: 1 MASRIGIANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAE 60
Query: 61 DKGLITPGK 69
KGLI PG+
Sbjct: 61 KKGLIKPGE 69
>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum
PE=2 SV=1
Length = 374
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 57/64 (89%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +DVT+LIG+TPMVYLN +V GCVA+IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+
Sbjct: 67 IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLIS 126
Query: 67 PGKV 70
PGK
Sbjct: 127 PGKT 130
>sp|P80608|CYSK_MAIZE Cysteine synthase OS=Zea mays PE=1 SV=2
Length = 325
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I KDVTELIG+TP+VYLN V DGCV AKLE M+PCSSVKDRI YSMI DAE+KGLIT
Sbjct: 8 IAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 67
Query: 67 PG 68
PG
Sbjct: 68 PG 69
>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis
thaliana GN=OASB PE=1 SV=2
Length = 392
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/63 (74%), Positives = 53/63 (84%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I + +LIG TPMVYLNNVV GCVA +AAKLE+M+PC SVKDRI YSMI DAE+KGLIT
Sbjct: 75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLIT 134
Query: 67 PGK 69
PGK
Sbjct: 135 PGK 137
>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum
PE=2 SV=1
Length = 386
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 56/64 (87%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +DVT+LIG+TPMVYLN + GCVA+IAAKLE+M+PC SVKDRI +SMI DAE+KGLI+
Sbjct: 69 IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLIS 128
Query: 67 PGKV 70
PGK
Sbjct: 129 PGKT 132
>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea
GN=CYSK PE=1 SV=2
Length = 383
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +DV++LIG TPMVYLNNV G VA+IAAKLE M+PC SVKDRI YSMI DAE KG+IT
Sbjct: 67 IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVIT 126
Query: 67 PGKV 70
PGK
Sbjct: 127 PGKT 130
>sp|Q43725|CYSKM_ARATH Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC
PE=1 SV=3
Length = 430
Score = 99.4 bits (246), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 3 DKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDK 62
D I +V++LIG TPMVYLN++ GCVA+IAAKLE+M+PC SVKDRI YSM+ DAE K
Sbjct: 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQK 168
Query: 63 GLITPGK 69
G I+PGK
Sbjct: 169 GFISPGK 175
>sp|O22682|CYSK4_ARATH Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana
GN=At3g03630 PE=1 SV=1
Length = 404
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/63 (69%), Positives = 50/63 (79%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +DVT+LIG TPMVYLN V DGC+A IAAKLE M+PC SVKDRI SMI +AE+ G IT
Sbjct: 99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAIT 158
Query: 67 PGK 69
P K
Sbjct: 159 PRK 161
>sp|Q76MX2|CAS1_SOLTU Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1,
mitochondrial OS=Solanum tuberosum GN=PCAS-1 PE=1 SV=1
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
IK V++LIG TP+VYLN V +GC A+IA K EMMQP SS+KDR A++MI DAE KGLIT
Sbjct: 32 IKTQVSQLIGKTPLVYLNKVSEGCGAYIAVKQEMMQPTSSIKDRPAFAMINDAEKKGLIT 91
Query: 67 PGK 69
PGK
Sbjct: 92 PGK 94
>sp|Q1KLZ1|CAS2_MALDO L-3-cyanoalanine synthase 2, mitochondrial OS=Malus domestica
GN=CAS2 PE=1 SV=1
Length = 375
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+IK V++LIG TP+VYLN V +GC A IA K EM QP +S+KDR A SMI DAE+KGL
Sbjct: 54 TQIKTQVSQLIGRTPIVYLNKVTEGCGAFIAVKQEMFQPTASIKDRPALSMINDAEEKGL 113
Query: 65 ITPGKV 70
ITPG+
Sbjct: 114 ITPGET 119
>sp|Q1KLZ2|CAS1_MALDO L-3-cyanoalanine synthase 1, mitochondrial OS=Malus domestica
GN=CAS1 PE=1 SV=1
Length = 376
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLI 65
+IK V++LIG TP+VYLN V +GC A+IA K EM QP +S+KDR A SMI DAE+KGLI
Sbjct: 54 QIKTQVSQLIGRTPIVYLNKVTEGCGAYIAVKQEMFQPTASIKDRPALSMINDAEEKGLI 113
Query: 66 TPGK 69
TPG+
Sbjct: 114 TPGE 117
>sp|Q9FS29|CAS2_SOLTU Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2,
mitochondrial OS=Solanum tuberosum GN=PCAS-2 PE=1 SV=1
Length = 347
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
IK +V++LIG TPMVYL V +GC A+IA K EM QP SS+KDR A +MI DAE KGLI+
Sbjct: 28 IKSEVSQLIGKTPMVYLKKVTEGCGAYIAVKQEMFQPTSSIKDRPALAMINDAEKKGLIS 87
Query: 67 PGKV 70
P K
Sbjct: 88 PEKT 91
>sp|Q43153|CYSC_SPIOL Bifunctional L-3-cyanoalanine synthase/cysteine synthase,
mitochondrial OS=Spinacia oleracea GN=CYSC PE=1 SV=1
Length = 368
Score = 83.6 bits (205), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/63 (61%), Positives = 51/63 (80%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
IK +V++LIG TP+VYL+ + +G A+IA K EMMQP +SVKDR A +MI+DAE KGLI+
Sbjct: 49 IKTNVSQLIGRTPLVYLSKISEGSGAYIAVKQEMMQPTASVKDRPALAMIEDAEKKGLIS 108
Query: 67 PGK 69
PGK
Sbjct: 109 PGK 111
>sp|Q9S757|CYSC1_ARATH Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1,
mitochondrial OS=Arabidopsis thaliana GN=CYSC1 PE=1 SV=1
Length = 368
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 45/62 (72%)
Query: 8 KKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITP 67
K+D + LIG TP+V+LN V +GC A++AAK E QP S+KDR A +MI DAE K LI P
Sbjct: 50 KRDASLLIGKTPLVFLNKVTEGCEAYVAAKQEHFQPTCSIKDRPAIAMIADAEKKKLIIP 109
Query: 68 GK 69
GK
Sbjct: 110 GK 111
>sp|P0A534|CYSK_MYCTU O-acetylserine sulfhydrylase OS=Mycobacterium tuberculosis
GN=cysK1 PE=1 SV=1
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +D+T+LIG TP+V L V DG VA I AKLE P +SVKDRI +M++ AE GLI
Sbjct: 3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIK 62
Query: 67 PGKVF----NGNSPI 77
P + +GN+ I
Sbjct: 63 PDTIILEPTSGNTGI 77
>sp|P0A535|CYSK_MYCBO O-acetylserine sulfhydrylase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=cysK PE=3 SV=1
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +D+T+LIG TP+V L V DG VA I AKLE P +SVKDRI +M++ AE GLI
Sbjct: 3 IAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIK 62
Query: 67 PGKVF----NGNSPI 77
P + +GN+ I
Sbjct: 63 PDTIILEPTSGNTGI 77
>sp|P73410|CYSK_SYNY3 Cysteine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=cysK PE=3 SV=2
Length = 312
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 6 EIKKDVTELIGHTPMVYLNNV--VDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKG 63
+I ++TELIG TP+V LN + ++GC A I KLE M P +SVKDRI +MI AE +G
Sbjct: 2 KIASNITELIGRTPLVRLNRIPLLEGCGAKIVVKLEGMNPAASVKDRIGINMINRAEQEG 61
Query: 64 LITPGKVF 71
LI PGK
Sbjct: 62 LIEPGKTL 69
>sp|O32978|CYSK_MYCLE O-acetylserine sulfhydrylase OS=Mycobacterium leprae (strain TN)
GN=cysK PE=3 SV=1
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I +DVT+L+G+TP+V L V +G +A + AKLE P +SVKDRI +MI AE+ GLI
Sbjct: 3 IAEDVTQLVGNTPLVRLRRVTEGALADVVAKLESFNPANSVKDRIGVAMIDTAEEAGLIK 62
Query: 67 PGKVF----NGNSPI 77
P V +GN+ I
Sbjct: 63 PDTVILEPTSGNTGI 77
>sp|Q5XAQ3|CYSK_STRP6 Cysteine synthase OS=Streptococcus pyogenes serotype M6 (strain
ATCC BAA-946 / MGAS10394) GN=cysK PE=1 SV=3
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+I K +TEL+G TP++ LN ++ A + KLE P SSVKDRIA SMI+ AE +GL
Sbjct: 2 TKIYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGL 61
Query: 65 ITPGKVF----NGNSPI 77
I+PG V +GN+ I
Sbjct: 62 ISPGDVIIEPTSGNTGI 78
>sp|O05393|MCCA_BACSU O-acetylserine dependent cystathionine beta-synthase OS=Bacillus
subtilis (strain 168) GN=mccA PE=1 SV=1
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 10 DVTELIGHTPMVYLNN--VVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITP 67
D+TELIG+TP++ L N V +G + AKLEMM P S+KDR+ +I+DA D G + P
Sbjct: 6 DITELIGNTPLLRLKNFDVPEGVAVY--AKLEMMNPGGSIKDRLGDMLIRDALDSGKVKP 63
Query: 68 GKVF----NGNSPILKLINHKNYAMNSVFL----FSVNVNNFNQAHPAS 108
G V GN+ I ++ + Y + ++F FS QA AS
Sbjct: 64 GGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSREKQQIMQALGAS 112
>sp|Q7DDL5|CYSK_NEIMB Cysteine synthase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=cysK PE=1 SV=1
Length = 310
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%)
Query: 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLI 65
+I +TELIG+TP+V LN + +G A +A KLE P SSVKDRIA +MI+ AE G I
Sbjct: 2 KIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKI 61
>sp|Q8CMT6|CYSK_STAES Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=cysK PE=3 SV=1
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 11 VTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
VT++IG+TP+V L NVVD A I KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q5HRP1|CYSK_STAEQ Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=cysK PE=3 SV=1
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 11 VTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
VT++IG+TP+V L NVVD A I KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63872|CYSK_STAAW Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK
PE=3 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q6GBX5|CYSK_STAAS Cysteine synthase OS=Staphylococcus aureus (strain MSSA476)
GN=cysK PE=3 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q6GJF8|CYSK_STAAR Cysteine synthase OS=Staphylococcus aureus (strain MRSA252)
GN=cysK PE=3 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63871|CYSK_STAAN Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK
PE=1 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|P63870|CYSK_STAAM Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=cysK PE=1 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q5HIG2|CYSK_STAAC Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK
PE=3 SV=1
Length = 310
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
++T++IG TP+V L NVVD A + KLE P SVKDRIA +MI+ AE +G I PG
Sbjct: 8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPG 66
>sp|Q59966|SRPG_SYNE7 Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC
7942) GN=srpG PE=3 SV=1
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 39/60 (65%)
Query: 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 69
D ++ IG TP+V LN +V G A + AK+E P SVK RI +MI DAE +GL+ PGK
Sbjct: 10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGK 69
>sp|Q7D8W0|Y1077_MYCTU Putative cystathionine beta-synthase Rv1077 OS=Mycobacterium
tuberculosis GN=cbs PE=1 SV=1
Length = 464
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I + ++ELIG TP+V LN+VV +AAK+E + P S KDRIA MI+ AE G +
Sbjct: 3 IAQHISELIGGTPLVRLNSVVPDGAGTVAAKVEYLNPGGSSKDRIAVKMIEAAEASGQLK 62
Query: 67 PG 68
PG
Sbjct: 63 PG 64
>sp|P37887|CYSK_BACSU Cysteine synthase OS=Bacillus subtilis (strain 168) GN=cysK PE=1
SV=3
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+ +TELIG+TP+V LN + D A + KLE M P SSVKDRI +MI+ AE +G
Sbjct: 2 VRVANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGK 61
Query: 65 ITPG 68
+ G
Sbjct: 62 LKAG 65
>sp|O34476|CYSM_BACSU Probable cysteine synthase OS=Bacillus subtilis (strain 168)
GN=ytkP PE=3 SV=1
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLI 65
+I + +LIG TP+V LN + A + KLE P SVKDR AY MI +AE GL+
Sbjct: 3 KIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLL 62
Query: 66 TPGKVF----NGNSPILKLINHKNYAMNSVFLF 94
PG V +GN+ I +N ++ +
Sbjct: 63 KPGSVIIEPTSGNTGIGLAMNAAARGYKAILVM 95
>sp|P53206|CYSK_YEAST Putative cysteine synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YGR012W PE=1 SV=1
Length = 393
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 8 KKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT- 66
K+ V ELIG+TP+V + ++ +I AKLE+ P S KDR+A ++IK AE+ G +
Sbjct: 46 KEGVEELIGNTPLVKIRSLTKATGVNIYAKLELCNPAGSAKDRVALNIIKTAEELGELVR 105
Query: 67 --PGKVFNGNS 75
PG VF G S
Sbjct: 106 GEPGWVFEGTS 116
>sp|P50867|CYSK_EMENI Cysteine synthase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=cysB PE=3 SV=2
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 11 VTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 68
+TE IG+TP++ L + + ++I AK E P SVKDR A ++KDAE++GL+ PG
Sbjct: 36 LTEAIGNTPLIRLKRLSEETGSNILAKAEFQNPGGSVKDRAALYVVKDAEERGLLKPG 93
>sp|Q8XSQ0|SBNA_RALSO Putative siderophore biosynthesis protein SbnA OS=Ralstonia
solanacearum (strain GMI1000) GN=sbnA PE=3 SV=1
Length = 338
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT 66
I K + + IG TP+V L + DG A + AKLEM+ P S+KDR A +I+ +G I
Sbjct: 2 IAKSIVDCIGGTPLVQLARLYDGRKAEVFAKLEMLNPAGSIKDRPARYIIERGLAEGSIA 61
Query: 67 PG 68
PG
Sbjct: 62 PG 63
>sp|P0A1E3|CYSK_SALTY Cysteine synthase A OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cysK PE=1 SV=2
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+I +D + IGHTP+V LN + +G I AK+E P SVK RI +MI DAE +G+
Sbjct: 2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGV 58
Query: 65 ITPG 68
+ PG
Sbjct: 59 LKPG 62
>sp|P0A1E4|CYSK_SALTI Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+I +D + IGHTP+V LN + +G I AK+E P SVK RI +MI DAE +G+
Sbjct: 2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGV 58
Query: 65 ITPG 68
+ PG
Sbjct: 59 LKPG 62
>sp|P0ABK5|CYSK_ECOLI Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1
SV=2
Length = 323
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+I +D + IGHTP+V LN + +G I AK+E P SVK RI +MI DAE +G+
Sbjct: 2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGV 58
Query: 65 ITPG 68
+ PG
Sbjct: 59 LKPG 62
>sp|P0ABK6|CYSK_ECO57 Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2
Length = 323
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 5 CEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGL 64
+I +D + IGHTP+V LN + +G I AK+E P SVK RI +MI DAE +G+
Sbjct: 2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGV 58
Query: 65 ITPG 68
+ PG
Sbjct: 59 LKPG 62
>sp|P32582|CBS_YEAST Cystathionine beta-synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CYS4 PE=1 SV=1
Length = 507
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 2 EDKCEIKKDVTELIGHTPMVYLNNVVD--GCVAHIAAKLEMMQPCSSVKDRIAYSMIKDA 59
E + + + +V +L+G+TP++ L + G I AKLE+ P S+KDRIA SM+++A
Sbjct: 5 EQQADSRHNVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEA 64
Query: 60 EDKGLITPGK 69
E G I P +
Sbjct: 65 EASGRIHPSR 74
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,112,144
Number of Sequences: 539616
Number of extensions: 1410250
Number of successful extensions: 3475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3369
Number of HSP's gapped (non-prelim): 103
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)