Query 033926
Match_columns 108
No_of_seqs 172 out of 1102
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 13:05:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vc3_A Beta-cyanoalnine syntha 100.0 4.7E-33 1.6E-37 214.1 10.0 102 4-105 22-130 (344)
2 3dwg_A Cysteine synthase B; su 100.0 4.5E-29 1.5E-33 190.3 10.3 101 5-105 3-116 (325)
3 2q3b_A Cysteine synthase A; py 100.0 2.7E-28 9.3E-33 184.4 10.0 102 4-105 3-110 (313)
4 1y7l_A O-acetylserine sulfhydr 100.0 3.4E-28 1.2E-32 184.1 10.2 98 6-105 2-105 (316)
5 2v03_A Cysteine synthase B; py 99.9 5.7E-28 1.9E-32 182.3 10.3 97 9-105 2-104 (303)
6 2egu_A Cysteine synthase; O-ac 99.9 5.2E-28 1.8E-32 182.5 9.6 100 6-105 3-108 (308)
7 3tbh_A O-acetyl serine sulfhyd 99.9 8.3E-28 2.8E-32 184.0 10.5 101 4-105 8-115 (334)
8 1z7w_A Cysteine synthase; tran 99.9 6.7E-28 2.3E-32 183.0 9.8 100 6-105 4-110 (322)
9 4aec_A Cysteine synthase, mito 99.9 7.2E-28 2.5E-32 190.7 9.9 103 3-105 109-218 (430)
10 2pqm_A Cysteine synthase; OASS 99.9 1.1E-27 3.6E-32 183.8 9.5 100 6-105 12-121 (343)
11 1ve1_A O-acetylserine sulfhydr 99.9 2.8E-27 9.5E-32 178.2 10.7 95 11-105 3-105 (304)
12 3l6b_A Serine racemase; pyrido 99.9 7.4E-28 2.5E-32 185.0 5.6 102 4-105 12-119 (346)
13 1jbq_A B, cystathionine beta-s 99.9 3.5E-27 1.2E-31 186.8 8.0 100 6-105 97-204 (435)
14 3pc3_A CG1753, isoform A; CBS, 99.9 4E-27 1.4E-31 188.9 8.2 102 4-105 47-156 (527)
15 1ve5_A Threonine deaminase; ri 99.9 1.5E-26 5.1E-31 174.5 5.1 99 3-105 6-108 (311)
16 1o58_A O-acetylserine sulfhydr 99.9 1.5E-25 5E-30 169.0 10.1 92 10-105 13-108 (303)
17 2gn0_A Threonine dehydratase c 99.9 1.7E-26 6E-31 176.9 3.1 101 4-105 27-131 (342)
18 1v71_A Serine racemase, hypoth 99.9 1.7E-26 5.8E-31 175.3 2.5 101 4-105 13-117 (323)
19 1p5j_A L-serine dehydratase; l 99.9 9.2E-26 3.1E-30 175.0 6.5 99 4-105 33-136 (372)
20 4h27_A L-serine dehydratase/L- 99.9 1.4E-25 5E-30 173.4 7.4 96 7-105 36-136 (364)
21 3aey_A Threonine synthase; PLP 99.9 4.4E-25 1.5E-29 169.3 8.0 94 9-105 20-121 (351)
22 2d1f_A Threonine synthase; ami 99.9 2.8E-25 9.5E-30 171.2 6.7 94 9-105 30-129 (360)
23 2rkb_A Serine dehydratase-like 99.9 5.3E-25 1.8E-29 166.6 7.5 90 13-105 3-97 (318)
24 2zsj_A Threonine synthase; PLP 99.9 3.2E-25 1.1E-29 170.1 5.9 94 9-105 22-123 (352)
25 1tdj_A Biosynthetic threonine 99.9 3.6E-25 1.2E-29 178.4 5.5 95 10-105 24-122 (514)
26 3ss7_X D-serine dehydratase; t 99.9 1.3E-24 4.4E-29 172.0 8.0 91 15-105 76-203 (442)
27 3iau_A Threonine deaminase; py 99.9 2.1E-25 7.3E-30 172.3 3.2 95 10-105 53-151 (366)
28 4d9i_A Diaminopropionate ammon 99.9 1.1E-23 3.9E-28 164.2 8.1 94 13-106 40-156 (398)
29 4d9b_A D-cysteine desulfhydras 99.9 5.4E-24 1.8E-28 163.1 5.9 97 6-105 21-134 (342)
30 1qop_B Tryptophan synthase bet 99.9 1.6E-23 5.6E-28 162.9 6.6 95 9-105 46-149 (396)
31 1v8z_A Tryptophan synthase bet 99.9 8.5E-24 2.9E-28 163.5 4.8 96 8-105 40-145 (388)
32 1f2d_A 1-aminocyclopropane-1-c 99.9 1.1E-23 3.7E-28 160.9 4.4 96 7-105 5-123 (341)
33 1tzj_A ACC deaminase, 1-aminoc 99.9 1.7E-23 5.8E-28 159.2 5.0 97 7-105 5-120 (338)
34 1wkv_A Cysteine synthase; homo 99.9 4.8E-23 1.7E-27 161.0 7.5 94 9-105 85-188 (389)
35 1j0a_A 1-aminocyclopropane-1-c 99.9 4.2E-23 1.4E-27 156.8 5.6 97 6-105 10-116 (325)
36 1x1q_A Tryptophan synthase bet 99.9 4.8E-23 1.6E-27 161.7 4.5 91 13-105 72-172 (418)
37 2o2e_A Tryptophan synthase bet 99.9 1.5E-22 5E-27 159.4 7.3 83 11-95 74-163 (422)
38 1e5x_A Threonine synthase; thr 99.8 1.3E-21 4.5E-26 156.4 7.6 91 14-105 127-228 (486)
39 1kl7_A Threonine synthase; thr 99.8 4E-19 1.4E-23 143.2 8.3 86 14-104 93-197 (514)
40 4f4f_A Threonine synthase; str 99.7 6.2E-18 2.1E-22 135.0 7.4 80 18-105 94-183 (468)
41 1vb3_A Threonine synthase; PLP 99.7 1.3E-17 4.4E-22 131.4 7.3 78 16-105 82-171 (428)
42 3v7n_A Threonine synthase; ssg 99.7 1.9E-17 6.5E-22 132.8 8.0 84 18-106 103-197 (487)
43 3kkj_A Amine oxidase, flavin-c 79.4 2.4 8.3E-05 27.6 4.0 20 72-91 10-31 (336)
44 3tpf_A Otcase, ornithine carba 57.1 13 0.00044 27.8 4.2 37 60-96 138-181 (307)
45 3oz2_A Digeranylgeranylglycero 53.8 11 0.00039 26.9 3.4 20 72-91 12-33 (397)
46 4hb9_A Similarities with proba 53.6 12 0.00041 27.1 3.5 20 72-91 9-30 (412)
47 2ywl_A Thioredoxin reductase r 48.3 20 0.00067 23.1 3.6 23 72-94 9-33 (180)
48 4fcc_A Glutamate dehydrogenase 47.5 83 0.0029 24.8 7.6 55 50-104 216-285 (450)
49 1yvv_A Amine oxidase, flavin-c 46.7 23 0.00079 24.9 4.0 22 72-93 10-33 (336)
50 3jyn_A Quinone oxidoreductase; 45.2 60 0.002 23.2 6.2 41 61-104 134-181 (325)
51 3rp8_A Flavoprotein monooxygen 44.3 20 0.0007 26.3 3.5 23 72-94 31-55 (407)
52 2cul_A Glucose-inhibited divis 44.2 25 0.00085 24.0 3.8 23 72-94 11-35 (232)
53 3s2e_A Zinc-containing alcohol 44.1 64 0.0022 23.2 6.2 44 59-105 158-207 (340)
54 3tqh_A Quinone oxidoreductase; 43.8 74 0.0025 22.7 6.5 34 59-92 144-184 (321)
55 4dgk_A Phytoene dehydrogenase; 43.0 22 0.00077 26.8 3.7 20 72-91 9-30 (501)
56 3dme_A Conserved exported prot 42.8 24 0.00082 25.0 3.6 23 72-94 12-36 (369)
57 2dpo_A L-gulonate 3-dehydrogen 42.5 37 0.0013 25.0 4.7 28 72-102 14-43 (319)
58 3aoe_E Glutamate dehydrogenase 42.4 83 0.0028 24.4 6.8 54 50-103 199-267 (419)
59 2oln_A NIKD protein; flavoprot 42.4 24 0.00082 25.7 3.6 21 72-92 12-34 (397)
60 3qwb_A Probable quinone oxidor 42.1 83 0.0029 22.5 6.6 41 61-104 142-189 (334)
61 4e12_A Diketoreductase; oxidor 41.6 33 0.0011 24.3 4.2 21 72-92 12-34 (283)
62 1ryi_A Glycine oxidase; flavop 40.6 27 0.00091 25.2 3.6 23 72-94 25-49 (382)
63 2tmg_A Protein (glutamate dehy 39.5 1.1E+02 0.0037 23.7 7.1 54 50-103 190-259 (415)
64 3gaz_A Alcohol dehydrogenase s 39.1 77 0.0026 22.9 6.0 40 61-104 144-190 (343)
65 1c1d_A L-phenylalanine dehydro 38.6 71 0.0024 24.1 5.8 43 50-93 155-205 (355)
66 3aog_A Glutamate dehydrogenase 38.3 1E+02 0.0035 24.1 6.8 54 50-103 216-284 (440)
67 3uog_A Alcohol dehydrogenase; 38.3 93 0.0032 22.7 6.4 41 61-104 183-229 (363)
68 2uzz_A N-methyl-L-tryptophan o 38.2 31 0.001 24.7 3.6 22 72-93 10-33 (372)
69 2bma_A Glutamate dehydrogenase 38.1 82 0.0028 25.0 6.3 54 50-103 233-301 (470)
70 3cgv_A Geranylgeranyl reductas 38.0 31 0.0011 24.8 3.6 23 72-94 12-36 (397)
71 1k0i_A P-hydroxybenzoate hydro 37.8 30 0.001 25.1 3.6 21 72-92 10-32 (394)
72 3nix_A Flavoprotein/dehydrogen 37.8 27 0.00093 25.6 3.3 23 72-94 13-37 (421)
73 2gf3_A MSOX, monomeric sarcosi 37.6 32 0.0011 24.8 3.6 22 72-93 11-34 (389)
74 3krt_A Crotonyl COA reductase; 37.5 83 0.0028 23.8 6.1 40 63-105 224-270 (456)
75 1y56_B Sarcosine oxidase; dehy 37.4 34 0.0012 24.6 3.8 23 72-94 13-37 (382)
76 3g0o_A 3-hydroxyisobutyrate de 37.4 48 0.0016 23.6 4.6 30 72-104 15-46 (303)
77 4gcm_A TRXR, thioredoxin reduc 37.4 33 0.0011 24.0 3.6 20 72-91 14-35 (312)
78 4a5l_A Thioredoxin reductase; 37.0 29 0.001 24.1 3.3 20 72-91 12-33 (314)
79 3r3j_A Glutamate dehydrogenase 36.9 84 0.0029 24.8 6.1 55 49-103 219-288 (456)
80 3gd5_A Otcase, ornithine carba 36.8 64 0.0022 24.2 5.2 25 72-96 166-192 (323)
81 4fk1_A Putative thioredoxin re 36.7 31 0.0011 24.3 3.4 20 72-91 14-35 (304)
82 2x3n_A Probable FAD-dependent 36.7 33 0.0011 25.0 3.6 23 72-94 14-38 (399)
83 3two_A Mannitol dehydrogenase; 36.5 1.2E+02 0.004 21.9 6.8 31 64-94 173-209 (348)
84 3ka7_A Oxidoreductase; structu 36.3 32 0.0011 25.2 3.5 20 72-91 8-29 (425)
85 1c0p_A D-amino acid oxidase; a 36.0 33 0.0011 24.7 3.5 22 72-93 14-37 (363)
86 3k92_A NAD-GDH, NAD-specific g 35.9 66 0.0023 25.1 5.3 55 50-104 202-271 (424)
87 4e4t_A Phosphoribosylaminoimid 35.6 53 0.0018 24.9 4.7 27 72-98 43-71 (419)
88 1v9l_A Glutamate dehydrogenase 35.3 79 0.0027 24.6 5.7 55 50-104 191-260 (421)
89 3alj_A 2-methyl-3-hydroxypyrid 35.3 34 0.0012 24.9 3.5 23 72-94 19-43 (379)
90 4eye_A Probable oxidoreductase 34.8 1E+02 0.0035 22.2 6.1 33 61-93 153-192 (342)
91 2vou_A 2,6-dihydroxypyridine h 34.8 35 0.0012 25.0 3.5 22 72-93 13-36 (397)
92 4ep1_A Otcase, ornithine carba 34.7 72 0.0025 24.1 5.2 25 72-96 188-214 (340)
93 1pvv_A Otcase, ornithine carba 34.6 80 0.0027 23.5 5.4 35 61-96 149-190 (315)
94 3fbs_A Oxidoreductase; structu 34.1 41 0.0014 22.9 3.6 22 72-93 10-33 (297)
95 3ihm_A Styrene monooxygenase A 34.1 32 0.0011 25.8 3.3 23 72-94 30-54 (430)
96 1bgv_A Glutamate dehydrogenase 33.7 1.1E+02 0.0039 23.9 6.4 44 50-93 211-261 (449)
97 3mw9_A GDH 1, glutamate dehydr 33.6 1.5E+02 0.0051 23.7 7.1 33 72-104 252-294 (501)
98 2qa1_A PGAE, polyketide oxygen 33.1 41 0.0014 26.0 3.8 21 72-92 19-41 (500)
99 3ado_A Lambda-crystallin; L-gu 33.1 41 0.0014 25.0 3.6 22 72-93 14-37 (319)
100 3nrn_A Uncharacterized protein 32.9 39 0.0013 24.9 3.5 20 72-91 8-29 (421)
101 4a0s_A Octenoyl-COA reductase/ 32.8 1.3E+02 0.0043 22.6 6.4 40 63-105 216-262 (447)
102 2ew2_A 2-dehydropantoate 2-red 32.7 57 0.002 22.7 4.3 21 72-92 11-33 (316)
103 1zsy_A Mitochondrial 2-enoyl t 32.5 1.4E+02 0.0048 21.6 7.0 35 61-95 161-202 (357)
104 3nx4_A Putative oxidoreductase 32.5 1.3E+02 0.0044 21.3 6.2 30 72-104 156-187 (324)
105 3goh_A Alcohol dehydrogenase, 32.5 1.3E+02 0.0045 21.2 6.5 35 58-92 133-173 (315)
106 4a2c_A Galactitol-1-phosphate 32.4 1.3E+02 0.0044 21.4 6.3 43 61-105 154-202 (346)
107 3itj_A Thioredoxin reductase 1 32.4 39 0.0013 23.6 3.3 22 72-93 30-53 (338)
108 2h78_A Hibadh, 3-hydroxyisobut 32.4 55 0.0019 23.1 4.1 29 72-103 11-41 (302)
109 3dje_A Fructosyl amine: oxygen 32.4 44 0.0015 24.7 3.7 21 72-92 14-37 (438)
110 4a9w_A Monooxygenase; baeyer-v 32.3 44 0.0015 23.4 3.6 23 72-94 11-35 (357)
111 3f8d_A Thioredoxin reductase ( 32.2 46 0.0016 23.0 3.6 23 72-94 23-47 (323)
112 4dup_A Quinone oxidoreductase; 32.0 1.3E+02 0.0045 21.7 6.3 41 61-104 161-208 (353)
113 2ef0_A Ornithine carbamoyltran 32.0 87 0.003 23.2 5.2 35 61-96 148-189 (301)
114 3fpc_A NADP-dependent alcohol 31.9 1.1E+02 0.0038 22.0 5.9 42 60-104 159-207 (352)
115 2xdo_A TETX2 protein; tetracyc 31.9 36 0.0012 25.0 3.2 23 72-94 34-58 (398)
116 3lzw_A Ferredoxin--NADP reduct 31.9 46 0.0016 23.1 3.6 24 72-95 15-40 (332)
117 1w2w_B 5-methylthioribose-1-ph 31.9 40 0.0014 23.2 3.2 23 72-94 72-94 (191)
118 4f2g_A Otcase 1, ornithine car 31.8 67 0.0023 23.9 4.6 25 72-96 163-189 (309)
119 2qa2_A CABE, polyketide oxygen 31.7 42 0.0014 25.9 3.6 21 72-92 20-42 (499)
120 3l6d_A Putative oxidoreductase 31.6 69 0.0024 22.9 4.6 29 72-103 17-47 (306)
121 3gms_A Putative NADPH:quinone 31.5 1.4E+02 0.0049 21.3 6.8 37 59-95 136-179 (340)
122 3mog_A Probable 3-hydroxybutyr 31.2 59 0.002 25.4 4.4 29 72-103 13-43 (483)
123 4ej6_A Putative zinc-binding d 31.1 1.2E+02 0.0042 22.2 6.0 42 61-104 176-223 (370)
124 3ojo_A CAP5O; rossmann fold, c 30.8 57 0.0019 25.3 4.2 31 72-105 19-51 (431)
125 2c0c_A Zinc binding alcohol de 30.6 1.4E+02 0.0047 21.8 6.2 40 62-104 158-204 (362)
126 3fmw_A Oxygenase; mithramycin, 30.5 46 0.0016 26.3 3.7 21 72-92 57-79 (570)
127 1h2b_A Alcohol dehydrogenase; 30.5 1.4E+02 0.0047 21.7 6.2 40 63-105 182-228 (359)
128 1kol_A Formaldehyde dehydrogen 30.5 1.4E+02 0.0046 22.0 6.2 42 62-105 180-227 (398)
129 3k7m_X 6-hydroxy-L-nicotine ox 30.3 49 0.0017 24.3 3.7 21 72-92 9-31 (431)
130 2bcg_G Secretory pathway GDP d 30.0 48 0.0016 25.1 3.6 21 72-92 19-41 (453)
131 3gqv_A Enoyl reductase; medium 29.9 86 0.0029 23.0 5.0 30 72-105 174-205 (371)
132 3a11_A Translation initiation 29.9 1E+02 0.0036 23.0 5.5 45 50-95 152-202 (338)
133 1f0y_A HCDH, L-3-hydroxyacyl-C 29.9 48 0.0017 23.6 3.5 21 72-92 23-45 (302)
134 3iup_A Putative NADPH:quinone 29.9 1.4E+02 0.005 21.8 6.3 48 52-105 160-213 (379)
135 3ihg_A RDME; flavoenzyme, anth 29.8 42 0.0014 25.9 3.3 21 72-92 13-35 (535)
136 3nyc_A D-arginine dehydrogenas 29.6 43 0.0015 23.8 3.2 20 72-92 17-38 (381)
137 4at0_A 3-ketosteroid-delta4-5a 29.6 48 0.0016 25.5 3.6 21 72-92 49-71 (510)
138 3c96_A Flavin-containing monoo 29.4 51 0.0017 24.2 3.6 23 72-94 12-37 (410)
139 3drw_A ADP-specific phosphofru 29.4 49 0.0017 26.3 3.7 36 70-106 115-152 (474)
140 3e1t_A Halogenase; flavoprotei 29.4 43 0.0015 25.8 3.3 23 72-94 15-39 (512)
141 2jae_A L-amino acid oxidase; o 29.2 48 0.0016 25.0 3.5 20 72-91 19-40 (489)
142 2gag_B Heterotetrameric sarcos 29.2 49 0.0017 23.9 3.5 22 72-93 29-54 (405)
143 1wpn_A Manganese-dependent ino 28.9 70 0.0024 21.2 4.0 24 76-99 20-45 (188)
144 3pvc_A TRNA 5-methylaminomethy 28.8 50 0.0017 26.6 3.7 22 72-93 272-295 (689)
145 2i6u_A Otcase, ornithine carba 28.7 1.1E+02 0.0039 22.5 5.4 24 73-96 159-184 (307)
146 3k96_A Glycerol-3-phosphate de 28.6 57 0.002 24.3 3.8 23 72-94 37-61 (356)
147 3c4n_A Uncharacterized protein 28.5 49 0.0017 24.4 3.4 22 72-93 44-69 (405)
148 3orq_A N5-carboxyaminoimidazol 28.4 60 0.002 24.0 3.9 24 72-95 20-45 (377)
149 1gtm_A Glutamate dehydrogenase 28.4 1.5E+02 0.0053 22.7 6.3 45 50-94 192-245 (419)
150 1leh_A Leucine dehydrogenase; 28.3 1.3E+02 0.0045 22.6 5.8 28 72-102 181-210 (364)
151 3pdu_A 3-hydroxyisobutyrate de 28.3 48 0.0017 23.3 3.2 22 72-93 9-32 (287)
152 3d6n_B Aspartate carbamoyltran 28.3 87 0.003 23.0 4.7 27 72-98 157-185 (291)
153 2vdc_G Glutamate synthase [NAD 28.2 58 0.002 25.0 3.9 23 72-94 130-154 (456)
154 2qcu_A Aerobic glycerol-3-phos 28.2 56 0.0019 25.1 3.8 21 72-92 11-33 (501)
155 3q2o_A Phosphoribosylaminoimid 28.1 81 0.0028 23.2 4.6 24 72-95 22-47 (389)
156 2y0c_A BCEC, UDP-glucose dehyd 28.1 76 0.0026 24.6 4.6 31 72-105 16-48 (478)
157 3cty_A Thioredoxin reductase; 28.0 59 0.002 22.7 3.6 22 72-93 24-47 (319)
158 2r0c_A REBC; flavin adenine di 27.9 53 0.0018 25.6 3.6 21 72-92 34-56 (549)
159 2rgh_A Alpha-glycerophosphate 27.9 50 0.0017 26.1 3.5 24 68-91 34-61 (571)
160 4dll_A 2-hydroxy-3-oxopropiona 27.5 74 0.0025 22.9 4.2 30 72-104 39-70 (320)
161 2zbw_A Thioredoxin reductase; 27.5 60 0.0021 22.7 3.6 23 72-94 13-37 (335)
162 3r7f_A Aspartate carbamoyltran 27.5 91 0.0031 23.1 4.7 26 73-98 159-186 (304)
163 4a8t_A Putrescine carbamoyltra 27.4 46 0.0016 25.1 3.1 25 72-96 184-210 (339)
164 2f1k_A Prephenate dehydrogenas 27.2 92 0.0032 21.5 4.6 28 72-102 8-37 (279)
165 2bry_A NEDD9 interacting prote 27.2 53 0.0018 25.3 3.5 22 72-93 100-123 (497)
166 2nx2_A Hypothetical protein YP 27.2 98 0.0034 20.9 4.5 36 56-94 36-81 (181)
167 1mv8_A GMD, GDP-mannose 6-dehy 27.1 72 0.0025 24.2 4.2 30 72-104 8-39 (436)
168 3qj4_A Renalase; FAD/NAD(P)-bi 27.1 39 0.0013 24.1 2.6 20 72-91 9-33 (342)
169 2g1u_A Hypothetical protein TM 27.0 48 0.0016 21.0 2.8 22 72-93 27-50 (155)
170 3ps9_A TRNA 5-methylaminomethy 27.0 46 0.0016 26.6 3.2 22 72-93 280-303 (676)
171 4a8p_A Putrescine carbamoyltra 26.8 48 0.0016 25.3 3.1 25 72-96 162-188 (355)
172 3fwz_A Inner membrane protein 26.8 1E+02 0.0034 19.1 4.3 29 72-103 15-45 (140)
173 3i3l_A Alkylhalidase CMLS; fla 26.8 53 0.0018 26.2 3.5 23 72-94 31-55 (591)
174 1zcj_A Peroxisomal bifunctiona 26.6 65 0.0022 24.8 3.9 20 72-91 45-66 (463)
175 3hwr_A 2-dehydropantoate 2-red 26.5 79 0.0027 22.8 4.2 20 72-91 27-48 (318)
176 3fbg_A Putative arginate lyase 26.5 1.8E+02 0.0061 20.9 6.6 30 72-104 160-191 (346)
177 3a11_A Translation initiation 26.5 56 0.0019 24.5 3.4 24 72-95 230-253 (338)
178 3doj_A AT3G25530, dehydrogenas 26.3 65 0.0022 23.1 3.6 21 72-92 29-51 (310)
179 3c4a_A Probable tryptophan hyd 26.3 54 0.0018 23.9 3.3 21 72-92 8-32 (381)
180 2j3h_A NADP-dependent oxidored 26.1 1.8E+02 0.0061 20.7 6.5 41 61-104 149-196 (345)
181 1z82_A Glycerol-3-phosphate de 26.0 83 0.0028 22.6 4.2 22 72-93 22-45 (335)
182 3m6i_A L-arabinitol 4-dehydrog 25.8 1E+02 0.0034 22.4 4.7 42 61-104 173-220 (363)
183 3s2u_A UDP-N-acetylglucosamine 25.7 1.6E+02 0.0053 21.4 5.7 32 65-96 91-126 (365)
184 4huj_A Uncharacterized protein 25.6 72 0.0025 21.6 3.6 23 72-94 31-55 (220)
185 3ab1_A Ferredoxin--NADP reduct 25.5 68 0.0023 22.9 3.6 23 72-94 22-46 (360)
186 2q7v_A Thioredoxin reductase; 25.4 70 0.0024 22.4 3.6 23 72-94 16-40 (325)
187 3r9u_A Thioredoxin reductase; 25.3 56 0.0019 22.4 3.1 22 72-93 12-35 (315)
188 2i0z_A NAD(FAD)-utilizing dehy 25.3 69 0.0024 24.1 3.8 26 68-93 28-57 (447)
189 1iz0_A Quinone oxidoreductase; 25.1 1.8E+02 0.006 20.4 5.8 31 62-93 121-158 (302)
190 1gu7_A Enoyl-[acyl-carrier-pro 25.1 1.9E+02 0.0066 20.7 6.6 33 63-95 162-202 (364)
191 4ekn_B Aspartate carbamoyltran 25.0 96 0.0033 23.0 4.4 24 73-96 163-189 (306)
192 2eih_A Alcohol dehydrogenase; 25.0 1.9E+02 0.0064 20.7 6.0 39 63-104 162-207 (343)
193 1qo8_A Flavocytochrome C3 fuma 24.9 60 0.0021 25.4 3.4 21 72-92 129-151 (566)
194 2weu_A Tryptophan 5-halogenase 24.8 51 0.0017 25.1 2.9 21 72-92 10-35 (511)
195 2dph_A Formaldehyde dismutase; 24.8 2E+02 0.0067 21.2 6.2 42 61-105 179-227 (398)
196 4b7c_A Probable oxidoreductase 24.7 1.9E+02 0.0065 20.5 6.4 41 61-104 143-190 (336)
197 3u62_A Shikimate dehydrogenase 24.7 1.3E+02 0.0045 21.2 5.0 30 72-104 116-148 (253)
198 2aqj_A Tryptophan halogenase, 24.7 62 0.0021 25.0 3.5 23 72-94 13-40 (538)
199 3o0h_A Glutathione reductase; 24.6 68 0.0023 24.4 3.6 22 72-93 34-57 (484)
200 3ecs_A Translation initiation 24.4 97 0.0033 23.1 4.4 33 65-97 119-157 (315)
201 1vdc_A NTR, NADPH dependent th 24.3 65 0.0022 22.5 3.3 22 72-93 16-39 (333)
202 1xa0_A Putative NADPH dependen 24.2 1.9E+02 0.0066 20.4 6.6 23 72-94 159-183 (328)
203 1y0p_A Fumarate reductase flav 24.1 72 0.0025 24.9 3.8 21 72-92 134-156 (571)
204 1nyt_A Shikimate 5-dehydrogena 24.1 1.8E+02 0.0061 20.4 5.6 20 72-91 127-148 (271)
205 1dxl_A Dihydrolipoamide dehydr 24.0 88 0.003 23.4 4.2 23 72-94 14-38 (470)
206 1t9k_A Probable methylthioribo 24.0 70 0.0024 24.1 3.6 23 72-94 248-270 (347)
207 3v76_A Flavoprotein; structura 24.0 75 0.0026 24.0 3.7 23 72-94 35-59 (417)
208 3gg2_A Sugar dehydrogenase, UD 24.0 1E+02 0.0035 23.7 4.6 30 72-104 10-41 (450)
209 2q0l_A TRXR, thioredoxin reduc 23.9 78 0.0027 21.9 3.6 22 72-93 9-33 (311)
210 3dtt_A NADP oxidoreductase; st 23.8 75 0.0026 21.9 3.5 21 72-92 27-49 (245)
211 1trb_A Thioredoxin reductase; 23.7 59 0.002 22.5 3.0 21 72-92 13-35 (320)
212 1pl8_A Human sorbitol dehydrog 23.6 1.8E+02 0.006 21.0 5.7 41 61-104 165-212 (356)
213 2a0u_A Initiation factor 2B; S 23.6 71 0.0024 24.5 3.5 23 72-94 277-299 (383)
214 3l8u_A SMU.1707C, putative rRN 23.5 66 0.0022 21.8 3.0 26 72-97 28-54 (182)
215 2yvk_A Methylthioribose-1-phos 23.4 72 0.0025 24.4 3.5 24 72-95 273-296 (374)
216 3oj0_A Glutr, glutamyl-tRNA re 23.4 83 0.0028 19.5 3.4 20 72-91 29-50 (144)
217 2ivd_A PPO, PPOX, protoporphyr 23.4 75 0.0026 23.7 3.6 20 72-91 24-45 (478)
218 3csu_A Protein (aspartate carb 23.2 42 0.0014 25.0 2.1 24 73-96 166-192 (310)
219 1rjw_A ADH-HT, alcohol dehydro 23.2 1.9E+02 0.0063 20.7 5.7 37 65-104 162-204 (339)
220 1vlv_A Otcase, ornithine carba 23.2 1.2E+02 0.0041 22.7 4.6 24 73-96 178-203 (325)
221 4gde_A UDP-galactopyranose mut 23.1 70 0.0024 23.9 3.4 20 72-91 18-40 (513)
222 1pg5_A Aspartate carbamoyltran 23.0 1E+02 0.0034 22.8 4.2 24 73-96 161-187 (299)
223 3axb_A Putative oxidoreductase 23.0 53 0.0018 24.4 2.7 22 72-93 31-55 (448)
224 2j8z_A Quinone oxidoreductase; 22.9 2.2E+02 0.0074 20.5 6.3 41 61-104 156-203 (354)
225 1fl2_A Alkyl hydroperoxide red 22.7 74 0.0025 22.0 3.3 22 72-93 9-32 (310)
226 2yg5_A Putrescine oxidase; oxi 22.6 80 0.0027 23.3 3.6 20 72-91 13-34 (453)
227 3da1_A Glycerol-3-phosphate de 22.5 67 0.0023 25.2 3.3 22 72-93 26-49 (561)
228 2b9w_A Putative aminooxidase; 22.5 96 0.0033 22.6 4.0 21 72-92 14-37 (424)
229 1ml4_A Aspartate transcarbamoy 22.4 33 0.0011 25.5 1.4 36 60-96 148-192 (308)
230 1s3e_A Amine oxidase [flavin-c 22.4 80 0.0027 24.0 3.7 21 72-92 12-34 (520)
231 3d1c_A Flavin-containing putat 22.4 85 0.0029 22.2 3.6 23 72-94 12-37 (369)
232 1e3j_A NADP(H)-dependent ketos 22.3 2E+02 0.0069 20.6 5.7 41 62-105 163-209 (352)
233 3atr_A Conserved archaeal prot 22.2 53 0.0018 24.6 2.6 23 72-94 14-38 (453)
234 1wly_A CAAR, 2-haloacrylate re 22.2 2.1E+02 0.0073 20.2 6.2 40 62-104 140-186 (333)
235 2yfq_A Padgh, NAD-GDH, NAD-spe 22.2 1.3E+02 0.0045 23.3 4.8 46 50-95 193-245 (421)
236 2iid_A L-amino-acid oxidase; f 22.1 72 0.0025 24.0 3.3 21 72-92 41-63 (498)
237 4e21_A 6-phosphogluconate dehy 22.0 1.2E+02 0.0042 22.5 4.6 30 72-104 30-61 (358)
238 3urh_A Dihydrolipoyl dehydroge 21.9 82 0.0028 23.9 3.6 23 72-94 33-57 (491)
239 2vvm_A Monoamine oxidase N; FA 21.8 85 0.0029 23.6 3.7 21 72-92 47-69 (495)
240 2raf_A Putative dinucleotide-b 21.8 89 0.0031 21.0 3.5 22 72-93 27-50 (209)
241 1js1_X Transcarbamylase; alpha 21.8 59 0.002 24.4 2.7 25 73-97 182-208 (324)
242 3lad_A Dihydrolipoamide dehydr 21.7 82 0.0028 23.7 3.6 23 72-94 11-35 (476)
243 1rp0_A ARA6, thiazole biosynth 21.5 79 0.0027 22.1 3.3 23 72-94 47-72 (284)
244 1piw_A Hypothetical zinc-type 21.5 2.3E+02 0.008 20.4 6.7 31 63-93 175-211 (360)
245 1sez_A Protoporphyrinogen oxid 21.4 71 0.0024 24.0 3.1 20 72-91 21-42 (504)
246 1v0j_A UDP-galactopyranose mut 21.3 82 0.0028 23.3 3.5 21 72-92 15-38 (399)
247 3sds_A Ornithine carbamoyltran 21.1 1.7E+02 0.0058 22.1 5.2 25 72-96 197-223 (353)
248 3llv_A Exopolyphosphatase-rela 21.0 1.1E+02 0.0038 18.6 3.6 29 72-103 14-44 (141)
249 1ks9_A KPA reductase;, 2-dehyd 20.9 93 0.0032 21.4 3.5 23 72-94 8-32 (291)
250 2e4g_A Tryptophan halogenase; 20.8 81 0.0028 24.5 3.4 24 72-95 33-61 (550)
251 1vj0_A Alcohol dehydrogenase, 20.8 2.5E+02 0.0086 20.5 6.4 41 61-104 188-236 (380)
252 1bkr_A Spectrin beta chain; fi 20.8 83 0.0028 19.4 2.9 49 41-89 25-79 (109)
253 1p9o_A Phosphopantothenoylcyst 20.7 70 0.0024 23.8 2.9 23 72-94 64-88 (313)
254 1p77_A Shikimate 5-dehydrogena 20.7 1.6E+02 0.0056 20.6 4.8 20 72-91 127-148 (272)
255 2gqf_A Hypothetical protein HI 20.7 98 0.0033 23.1 3.8 23 72-94 12-36 (401)
256 1zq6_A Otcase, ornithine carba 20.6 70 0.0024 24.4 2.9 21 74-94 207-229 (359)
257 1i36_A Conserved hypothetical 20.6 1.3E+02 0.0044 20.6 4.2 20 72-91 8-29 (264)
258 3dgh_A TRXR-1, thioredoxin red 20.6 91 0.0031 23.6 3.6 20 72-91 17-38 (483)
259 4dna_A Probable glutathione re 20.6 81 0.0028 23.7 3.3 22 72-93 13-36 (463)
260 3fbt_A Chorismate mutase and s 20.5 2.1E+02 0.0071 20.6 5.4 29 72-102 130-160 (282)
261 3obb_A Probable 3-hydroxyisobu 20.5 92 0.0032 22.5 3.5 30 72-104 11-42 (300)
262 1jvb_A NAD(H)-dependent alcoho 20.4 2.4E+02 0.0082 20.1 6.1 39 63-104 166-212 (347)
263 3jx9_A Putative phosphoheptose 20.4 1E+02 0.0035 20.8 3.5 30 64-93 74-112 (170)
264 2wdq_A Succinate dehydrogenase 20.4 89 0.003 24.8 3.6 22 72-93 15-38 (588)
265 3kwm_A Ribose-5-phosphate isom 20.4 2E+02 0.0067 20.3 5.1 34 64-97 23-61 (224)
266 3jv7_A ADH-A; dehydrogenase, n 20.4 1.9E+02 0.0064 20.7 5.2 39 64-105 168-213 (345)
267 1yqg_A Pyrroline-5-carboxylate 20.4 1.4E+02 0.0048 20.3 4.3 29 72-103 8-39 (263)
268 3gt0_A Pyrroline-5-carboxylate 20.3 1.6E+02 0.0054 20.0 4.6 29 72-103 10-44 (247)
269 3l8k_A Dihydrolipoyl dehydroge 20.3 93 0.0032 23.4 3.6 23 72-94 12-36 (466)
270 2w37_A Ornithine carbamoyltran 20.3 1.4E+02 0.0049 22.7 4.6 24 73-96 187-212 (359)
271 1t5o_A EIF2BD, translation ini 20.1 80 0.0027 23.9 3.2 23 72-94 245-267 (351)
272 2e5v_A L-aspartate oxidase; ar 20.0 99 0.0034 23.6 3.7 22 72-93 7-30 (472)
273 1id1_A Putative potassium chan 20.0 1.7E+02 0.0057 18.2 4.4 23 72-94 11-35 (153)
No 1
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=100.00 E-value=4.7e-33 Score=214.14 Aligned_cols=102 Identities=46% Similarity=0.693 Sum_probs=94.7
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCe--Ee---cchHHHH
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK--VF---NGNSPIL 78 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~--~v---sGN~g~a 78 (108)
...|+++|.++||+|||+++++|++..|++||+|+|++|||||||||+|+++|..|.++|.+.+|. ++ +||||+|
T Consensus 22 ~~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~a 101 (344)
T 3vc3_A 22 STNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGIS 101 (344)
T ss_dssp CCSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHH
T ss_pred hhhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHH
Confidence 346788999999999999999999988999999999999999999999999999999999887763 33 9999999
Q ss_pred H-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 79 K-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 79 l-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ ++ +.+|++|+||||+++|++|+++++
T Consensus 102 lA~~aa~~G~~~~IvmP~~~~~~k~~~~~ 130 (344)
T 3vc3_A 102 MAFMAAMKGYKMVLTMPSYTSLERRVTMR 130 (344)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHcCCcEEEEECCCChHHHHHHHH
Confidence 9 99 999999999999999999999886
No 2
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=99.96 E-value=4.5e-29 Score=190.31 Aligned_cols=101 Identities=30% Similarity=0.393 Sum_probs=93.0
Q ss_pred hhhHHHHhcccCCCceeEccCccCC-------CCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cc
Q 033926 5 CEIKKDVTELIGHTPMVYLNNVVDG-------CVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NG 73 (108)
Q Consensus 5 ~~~~~~i~~~v~~TPLv~~~~l~~~-------~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sG 73 (108)
|+++++|.+++++|||++++++++. .+.+||+|+|++|||||||||+|.+++..|.++|.++++.+| +|
T Consensus 3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~~vv~aSsG 82 (325)
T 3dwg_A 3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGATILEPTSG 82 (325)
T ss_dssp CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTCEEEEECSS
T ss_pred cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCc
Confidence 5678999999999999999998876 678999999999999999999999999999999987765544 99
Q ss_pred hHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 74 NSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 74 N~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
|||+|+ ++ +.+|++|+||||+++|+.|+++++
T Consensus 83 N~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~ 116 (325)
T 3dwg_A 83 NTGISLAMAARLKGYRLICVMPENTSVERRQLLE 116 (325)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 999999 99 999999999999999999999875
No 3
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=99.95 E-value=2.7e-28 Score=184.37 Aligned_cols=102 Identities=37% Similarity=0.603 Sum_probs=92.9
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeE-e---cchHHHHH
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKV-F---NGNSPILK 79 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~-v---sGN~g~al 79 (108)
.+.++++|.+.+++|||++++++++..+.+||+|+|++|||||||||++.+++..+.++|.+++|.+ + +||||+|+
T Consensus 3 ~~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~al 82 (313)
T 2q3b_A 3 HMSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGIAL 82 (313)
T ss_dssp -CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECSSHHHHHH
T ss_pred ccchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHHH
Confidence 3567889999999999999999887778899999999999999999999999999999998777643 3 99999999
Q ss_pred -HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 -LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 -~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+++|+.|+++++
T Consensus 83 A~~a~~~G~~~~iv~p~~~~~~k~~~~~ 110 (313)
T 2q3b_A 83 AMVCAARGYRCVLTMPETMSLERRMLLR 110 (313)
T ss_dssp HHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 99 999999999999999999999876
No 4
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=99.95 E-value=3.4e-28 Score=184.05 Aligned_cols=98 Identities=28% Similarity=0.377 Sum_probs=89.8
Q ss_pred hhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHHHH-H
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPILK-L 80 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al-~ 80 (108)
++++++.+.+++|||++++++ + .+.+||+|+|++|||||||||++.+++..+.++|.++++.+| +||||+|+ +
T Consensus 2 ~~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~~~vv~~ssGN~g~a~A~ 79 (316)
T 1y7l_A 2 AIYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKEIVDATSGNTGIALAY 79 (316)
T ss_dssp CCCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTTCEEEESCCSHHHHHHHH
T ss_pred cchhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCcHHHHHHHH
Confidence 457889999999999999998 6 789999999999999999999999999999999987664443 99999999 9
Q ss_pred H-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 81 I-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 81 ~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ +.+|++|+||||+++|+.|+++++
T Consensus 80 ~a~~~G~~~~iv~p~~~~~~k~~~~~ 105 (316)
T 1y7l_A 80 VAAARGYKITLTMPETMSLERKRLLC 105 (316)
T ss_dssp HHHHHTCCEEEEEETTSCHHHHHHHH
T ss_pred HHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 9 999999999999999999999876
No 5
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=99.95 E-value=5.7e-28 Score=182.25 Aligned_cols=97 Identities=34% Similarity=0.464 Sum_probs=88.9
Q ss_pred HHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHHHH-HH-H
Q 033926 9 KDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPILK-LI-N 82 (108)
Q Consensus 9 ~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al-~~-~ 82 (108)
++|.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.++|.+++|.+| +||||+|+ ++ +
T Consensus 2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g~~vv~~ssGN~g~a~A~~a~ 81 (303)
T 2v03_A 2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAA 81 (303)
T ss_dssp CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECSSHHHHHHHHHHH
T ss_pred cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHH
Confidence 467889999999999999877789999999999999999999999999999999987765433 99999999 99 9
Q ss_pred HcCCcEEEEecCCCCHHHHhhcc
Q 033926 83 HKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 83 ~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
.+|++|+||||+++|+.|+++++
T Consensus 82 ~~G~~~~iv~p~~~~~~k~~~~~ 104 (303)
T 2v03_A 82 LKGYRMKLLMPDNMSQERRAAMR 104 (303)
T ss_dssp HHTCEEEEEEETTSCHHHHHHHH
T ss_pred HcCCcEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999876
No 6
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=99.95 E-value=5.2e-28 Score=182.46 Aligned_cols=100 Identities=40% Similarity=0.553 Sum_probs=91.6
Q ss_pred hhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCe-Ee---cchHHHHH-H
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK-VF---NGNSPILK-L 80 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~-~v---sGN~g~al-~ 80 (108)
+++++|.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.++|.+++|. ++ +||||+|+ +
T Consensus 3 ~~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~~vv~assGN~g~a~A~ 82 (308)
T 2egu_A 3 RTVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDTIVEPTSGNTGIGLAM 82 (308)
T ss_dssp CCCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTCEEEEECCHHHHHHHHH
T ss_pred hHHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHHHHH
Confidence 3578899999999999999998777899999999999999999999999999999999877753 33 99999999 9
Q ss_pred H-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 81 I-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 81 ~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ +.+|++|+||||+++|+.|+++++
T Consensus 83 ~a~~~G~~~~iv~p~~~~~~k~~~~~ 108 (308)
T 2egu_A 83 VAAAKGYKAVLVMPDTMSLERRNLLR 108 (308)
T ss_dssp HHHHHTCEEEEEEESCSCHHHHHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHH
Confidence 9 999999999999999999999875
No 7
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=99.95 E-value=8.3e-28 Score=184.01 Aligned_cols=101 Identities=27% Similarity=0.485 Sum_probs=92.1
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeE--e---cchHHHH
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKV--F---NGNSPIL 78 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~--v---sGN~g~a 78 (108)
...++++|.+.+++|||++++++ ...+.+||+|+|++|||||||||+|.+++..+.++|.+++|.+ + +||||+|
T Consensus 8 i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~a 86 (334)
T 3tbh_A 8 SKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVS 86 (334)
T ss_dssp TTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHH
Confidence 34567889999999999999998 7778999999999999999999999999999999998777732 3 9999999
Q ss_pred H-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 79 K-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 79 l-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ ++ +.+|++|+||||+++|+.|+++++
T Consensus 87 lA~aa~~~G~~~~iv~p~~~~~~k~~~~~ 115 (334)
T 3tbh_A 87 LAHLGAIRGYKVIITMPESMSLERRCLLR 115 (334)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEECCCCCHHHHHHHH
Confidence 9 99 999999999999999999999875
No 8
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=99.95 E-value=6.7e-28 Score=183.01 Aligned_cols=100 Identities=54% Similarity=0.828 Sum_probs=91.7
Q ss_pred hhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCe-E-e---cchHHHHH-
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK-V-F---NGNSPILK- 79 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~-~-v---sGN~g~al- 79 (108)
.+++++...+++|||++++++++..+.+||+|+|++|||||||||++.+++..+.++|.+++|. + + +||||+|+
T Consensus 4 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA 83 (322)
T 1z7w_A 4 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA 83 (322)
T ss_dssp CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred hhhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHH
Confidence 3678899999999999999998777889999999999999999999999999999999877653 3 3 99999999
Q ss_pred HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 ~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+++++.|+++++
T Consensus 84 ~aa~~~G~~~~iv~p~~~~~~k~~~~~ 110 (322)
T 1z7w_A 84 FTAAAKGYKLIITMPASMSTERRIILL 110 (322)
T ss_dssp HHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHcCCCEEEEeCCCCCHHHHHHHH
Confidence 99 999999999999999999999876
No 9
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=99.95 E-value=7.2e-28 Score=190.67 Aligned_cols=103 Identities=49% Similarity=0.806 Sum_probs=94.9
Q ss_pred chhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCe--Ee---cchHHH
Q 033926 3 DKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK--VF---NGNSPI 77 (108)
Q Consensus 3 ~~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~--~v---sGN~g~ 77 (108)
..+++++++.+.+|+|||++++++++..|.+||+|+|++||+||||||+|.+++..|+++|.+.+|. ++ +||||+
T Consensus 109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~ 188 (430)
T 4aec_A 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI 188 (430)
T ss_dssp SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence 4567789999999999999999998888899999999999999999999999999999999887763 23 999999
Q ss_pred HH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 78 LK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 78 al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
|+ ++ +.+|++|+||||+++++.|+++++
T Consensus 189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r 218 (430)
T 4aec_A 189 GLAFIAASRGYRLILTMPASMSMERRVLLK 218 (430)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEEcCCCCHHHHHHHH
Confidence 99 99 999999999999999999999876
No 10
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=99.95 E-value=1.1e-27 Score=183.84 Aligned_cols=100 Identities=30% Similarity=0.428 Sum_probs=91.2
Q ss_pred hhHHHHhcccCCCceeEccCccC----CCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeE-e---cchHHH
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVD----GCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKV-F---NGNSPI 77 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~----~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~-v---sGN~g~ 77 (108)
++++++.+.+++|||++++++++ ..+.+||+|+|++|||||||||+|.+++..+.++|.+++|.+ + |||||+
T Consensus 12 ~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~~vv~aSsGN~g~ 91 (343)
T 2pqm_A 12 RIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTSGNTGI 91 (343)
T ss_dssp CEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTCEEEEECSSHHHH
T ss_pred hHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCCEEEEECCcHHHH
Confidence 45678899999999999999887 678899999999999999999999999999999998777633 3 999999
Q ss_pred HH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 78 LK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 78 al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
|+ ++ +.+|++|+||||+++|+.|+++++
T Consensus 92 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~ 121 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIAMPSTMSVERQMIMK 121 (343)
T ss_dssp HHHHHHHHHTCCEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEECCCCCHHHHHHHH
Confidence 99 99 999999999999999999999876
No 11
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=99.94 E-value=2.8e-27 Score=178.19 Aligned_cols=95 Identities=36% Similarity=0.531 Sum_probs=87.2
Q ss_pred HhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCe--Ee----cchHHHHH-HH-H
Q 033926 11 VTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK--VF----NGNSPILK-LI-N 82 (108)
Q Consensus 11 i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~--~v----sGN~g~al-~~-~ 82 (108)
|.+.+++|||++++++++..+.+||+|+|++|||||||||++.+++..+.++|.+++|. +| +||||+|+ ++ +
T Consensus 3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~ 82 (304)
T 1ve1_A 3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA 82 (304)
T ss_dssp GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH
T ss_pred hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHH
Confidence 67889999999999998777899999999999999999999999999999988776544 33 99999999 99 9
Q ss_pred HcCCcEEEEecCCCCHHHHhhcc
Q 033926 83 HKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 83 ~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
.+|++|+||||+++++.|+++++
T Consensus 83 ~~G~~~~i~~p~~~~~~k~~~~~ 105 (304)
T 1ve1_A 83 SRGYRLILTMPAQMSEERKRVLK 105 (304)
T ss_dssp HHTCEEEEEEETTCCHHHHHHHH
T ss_pred HcCCcEEEEeCCCCCHHHHHHHH
Confidence 99999999999999999999876
No 12
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=99.94 E-value=7.4e-28 Score=185.03 Aligned_cols=102 Identities=16% Similarity=0.063 Sum_probs=87.1
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCC-CCeEe---cchHHHHH
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLIT-PGKVF---NGNSPILK 79 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~-~g~~v---sGN~g~al 79 (108)
...++++|.+.+++|||++++++++..|.+||+|+|++|||||||||+|.+++..+.+.|... ...++ +||||+|+
T Consensus 12 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~vv~~SsGNhg~a~ 91 (346)
T 3l6b_A 12 VEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQAL 91 (346)
T ss_dssp HHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CCCSCEEEECSSHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccCCCEEEEeCCCHHHHHH
Confidence 456788999999999999999988777899999999999999999999999999998875432 22233 99999999
Q ss_pred -HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 -LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 -~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+++|+.|+++++
T Consensus 92 A~aa~~~G~~~~iv~p~~~~~~k~~~~~ 119 (346)
T 3l6b_A 92 TYAAKLEGIPAYIVVPQTAPDCKKLAIQ 119 (346)
T ss_dssp HHHHHHTTCCEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHhCCCEEEEECCCCCHHHHHHHH
Confidence 99 999999999999999999998875
No 13
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=99.94 E-value=3.5e-27 Score=186.82 Aligned_cols=100 Identities=32% Similarity=0.449 Sum_probs=90.8
Q ss_pred hhHHHHhcccCCCceeEccCccCCCC--ceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHHHH
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCV--AHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPILK 79 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~--~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al 79 (108)
.++++|.+.+++|||++++++++..| ++||+|+|++|||||||||+|.+++..+.++|.++++.+| +||||+|+
T Consensus 97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~tVV~aSsGN~G~Al 176 (435)
T 1jbq_A 97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSGNTGIGL 176 (435)
T ss_dssp SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTCEEEEECSSHHHHHH
T ss_pred hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHHHH
Confidence 45678899999999999998876555 7999999999999999999999999999999988776543 99999999
Q ss_pred -HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 -LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 -~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||++++++|+++++
T Consensus 177 A~aaa~~Gi~~~IvmP~~~s~~k~~~l~ 204 (435)
T 1jbq_A 177 ALAAAVRGYRCIIVMPEKMSSEKVDVLR 204 (435)
T ss_dssp HHHHHHHTCEEEEEECSCCCHHHHHHHH
T ss_pred HHHHHHcCCeEEEEeCCCCCHHHHHHHH
Confidence 99 999999999999999999999876
No 14
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.94 E-value=4e-27 Score=188.89 Aligned_cols=102 Identities=34% Similarity=0.526 Sum_probs=93.1
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCC--ceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHH
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCV--AHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPI 77 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~--~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~ 77 (108)
...++++|.+++|+|||++++++++..| ++||+|+|++|||||||||+|.+++..|.++|.+++|.+| +||||+
T Consensus 47 ~~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~~vv~~ssGN~g~ 126 (527)
T 3pc3_A 47 RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGI 126 (527)
T ss_dssp CCSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTCEEEEECSSHHHH
T ss_pred hhhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCCHHHH
Confidence 3567888999999999999999876555 7999999999999999999999999999999988887654 999999
Q ss_pred HH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 78 LK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 78 al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
|+ ++ +.+|++|+||||+++++.|+++++
T Consensus 127 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~ 156 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIVMPEKMSNEKVSALR 156 (527)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEEEcCCCCHHHHHHHH
Confidence 99 99 999999999999999999999875
No 15
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=99.93 E-value=1.5e-26 Score=174.50 Aligned_cols=99 Identities=17% Similarity=0.035 Sum_probs=84.7
Q ss_pred chhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-
Q 033926 3 DKCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK- 79 (108)
Q Consensus 3 ~~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al- 79 (108)
+...+++++.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++..+. + ..+++. +||||+|+
T Consensus 6 ~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~--~~~vv~~ssGN~g~alA 81 (311)
T 1ve5_A 6 DLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N--PKGLLAVSSGNHAQGVA 81 (311)
T ss_dssp HHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S--CCCEEEECSSHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C--CCeEEEECCCcHHHHHH
Confidence 3456788999999999999999887767889999999999999999999999999886 2 122332 99999999
Q ss_pred HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 ~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+++++.|+++++
T Consensus 82 ~~a~~~G~~~~iv~p~~~~~~k~~~~~ 108 (311)
T 1ve5_A 82 YAAQVLGVKALVVMPEDASPYKKACAR 108 (311)
T ss_dssp HHHHHHTCCEEEECCCC--CCHHHHHH
T ss_pred HHHHHcCCCEEEEECCCCCHHHHHHHH
Confidence 99 999999999999999999998876
No 16
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=99.92 E-value=1.5e-25 Score=169.05 Aligned_cols=92 Identities=35% Similarity=0.419 Sum_probs=83.3
Q ss_pred HHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-HH-HHcC
Q 033926 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK-LI-NHKN 85 (108)
Q Consensus 10 ~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al-~~-~~~G 85 (108)
-+.+.+++|||+++++++ .+||+|+|++|||||||||++.+++..+.++|.++++++. +||||+|+ ++ +.+|
T Consensus 13 ~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~vv~aSsGN~g~a~A~aa~~~G 88 (303)
T 1o58_A 13 MMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNGIVEPTSGNMGIAIAMIGAKRG 88 (303)
T ss_dssp HHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHT
T ss_pred hhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCCEEEECchHHHHHHHHHHHHcC
Confidence 356778999999998875 6899999999999999999999999999999876666443 99999999 99 9999
Q ss_pred CcEEEEecCCCCHHHHhhcc
Q 033926 86 YAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 86 ~~~~ivvp~~~~~~k~~~~~ 105 (108)
++|+||||+++|+.|+++++
T Consensus 89 ~~~~iv~p~~~~~~k~~~~~ 108 (303)
T 1o58_A 89 HRVILTMPETMSVERRKVLK 108 (303)
T ss_dssp CCEEEEEETTSCHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHH
Confidence 99999999999999999876
No 17
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.92 E-value=1.7e-26 Score=176.89 Aligned_cols=101 Identities=23% Similarity=0.140 Sum_probs=86.6
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-H
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK-L 80 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al-~ 80 (108)
...++++|.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.+++. ..+++. +||||+|+ +
T Consensus 27 i~~a~~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdR~a~~~i~~a~~~~~-~~~vv~~ssGN~g~alA~ 105 (342)
T 2gn0_A 27 ILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEK-RKGVVACSAGNHAQGVSL 105 (342)
T ss_dssp HHHHHHHHTTTSCCCCCCBCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHHSCHHHH-HTCEEEECSSHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCceEchhhHHHhCCEEEEEEccCCCcCChHHHHHHHHHHHHHHhcC-CCEEEEECCChHHHHHHH
Confidence 3456788999999999999998877668899999999999999999999999998863221 122332 99999999 9
Q ss_pred H-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 81 I-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 81 ~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ +.+|++|+||||+++++.|+++++
T Consensus 106 aa~~~G~~~~iv~p~~~~~~k~~~~~ 131 (342)
T 2gn0_A 106 SCAMLGIDGKVVMPKGAPKSKVAATC 131 (342)
T ss_dssp HHHHHTCCEEEEECTTSCHHHHHHHH
T ss_pred HHHHcCCCEEEEECCCCCHHHHHHHH
Confidence 9 999999999999999999999875
No 18
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.92 E-value=1.7e-26 Score=175.31 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=85.4
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-H
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK-L 80 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al-~ 80 (108)
...++++|.+.+++|||++++++++..|.+||+|+|++||+||||||++.+++..+.+.. ...+++. +||||+|+ +
T Consensus 13 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~-~~~~vv~~ssGN~g~alA~ 91 (323)
T 1v71_A 13 VASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQ-RKAGVLTFSSGNHAQAIAL 91 (323)
T ss_dssp HHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHH-HHHCEEECCSSHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhc-CCCeEEEeCCCcHHHHHHH
Confidence 345678899999999999999887666889999999999999999999999998665321 0112232 99999999 9
Q ss_pred H-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 81 I-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 81 ~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+ +.+|++|+||||+++|++|+++++
T Consensus 92 ~a~~~G~~~~iv~p~~~~~~k~~~~~ 117 (323)
T 1v71_A 92 SAKILGIPAKIIMPLDAPEAKVAATK 117 (323)
T ss_dssp HHHHTTCCEEEEEETTCCHHHHHHHH
T ss_pred HHHHcCCCEEEECCCCCcHHHHHHHH
Confidence 9 999999999999999999999876
No 19
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.92 E-value=9.2e-26 Score=175.05 Aligned_cols=99 Identities=15% Similarity=0.072 Sum_probs=83.0
Q ss_pred hhhhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-
Q 033926 4 KCEIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK- 79 (108)
Q Consensus 4 ~~~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al- 79 (108)
|..+..++...+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.++|. . .++ +||||+|+
T Consensus 33 y~~~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~--~-~vv~aSsGN~g~alA 109 (372)
T 1p5j_A 33 GSEFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC--A-HFVCSSAGNAGMAAA 109 (372)
T ss_dssp -------CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC--C-EEEECCSSHHHHHHH
T ss_pred HHHhcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC--C-EEEEeCCCHHHHHHH
Confidence 4455556677899999999998876667899999999999999999999999999988762 2 333 99999999
Q ss_pred HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 ~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+++++.|+++++
T Consensus 110 ~aa~~~G~~~~iv~p~~~~~~k~~~~~ 136 (372)
T 1p5j_A 110 YAARQLGVPATIVVPGTTPALTIERLK 136 (372)
T ss_dssp HHHHHHTCCEEEEECTTCCHHHHHHHH
T ss_pred HHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 99 999999999999999999999875
No 20
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=99.92 E-value=1.4e-25 Score=173.39 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=82.8
Q ss_pred hHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-
Q 033926 7 IKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI- 81 (108)
Q Consensus 7 ~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~- 81 (108)
.+.+....+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.+.|.. .++ +||||+|+ ++
T Consensus 36 ~~~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~---~vv~aSsGN~g~alA~aa 112 (364)
T 4h27_A 36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCA---HFVCSSSGNAGMAAAYAA 112 (364)
T ss_dssp -----CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCC---EEEECCSSHHHHHHHHHH
T ss_pred hhhhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCCC---EEEEeCCChHHHHHHHHH
Confidence 33445567899999999998877788999999999999999999999999999987742 333 99999999 99
Q ss_pred HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 82 NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 82 ~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+.+|++|+||||+++++.|+++++
T Consensus 113 ~~~G~~~~iv~p~~~~~~k~~~~~ 136 (364)
T 4h27_A 113 RQLGVPATIVVPGTTPALTIERLK 136 (364)
T ss_dssp HHHTCCEEEEEETTSCHHHHHHHH
T ss_pred HHhCCceEEEECCCCCHHHHHHHH
Confidence 999999999999999999999885
No 21
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=99.91 E-value=4.4e-25 Score=169.31 Aligned_cols=94 Identities=22% Similarity=0.201 Sum_probs=84.4
Q ss_pred HHHhcccCCCceeEc--cCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-
Q 033926 9 KDVTELIGHTPMVYL--NNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI- 81 (108)
Q Consensus 9 ~~i~~~v~~TPLv~~--~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~- 81 (108)
.++...+|+|||+++ +++++..|++||+|+|++|||||||||++.+++..+.++|.. .++ +||||+|+ ++
T Consensus 20 ~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~~---~vv~~SsGN~g~alA~~a 96 (351)
T 3aey_A 20 PVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQ---AVACASTGNTAASAAAYA 96 (351)
T ss_dssp CCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCS---EEEESCSSHHHHHHHHHH
T ss_pred CceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCCC---EEEEeCCCHHHHHHHHHH
Confidence 456778999999999 888776788999999999999999999999999999988742 333 99999999 99
Q ss_pred HHcCCcEEEEecCC-CCHHHHhhcc
Q 033926 82 NHKNYAMNSVFLFS-VNVNNFNQAH 105 (108)
Q Consensus 82 ~~~G~~~~ivvp~~-~~~~k~~~~~ 105 (108)
+.+|++|+||||++ +++.|+++++
T Consensus 97 ~~~G~~~~iv~p~~~~~~~k~~~~~ 121 (351)
T 3aey_A 97 ARAGILAIVVLPAGYVALGKVAQSL 121 (351)
T ss_dssp HHHTSEEEEEEETTCSCHHHHHHHH
T ss_pred HHcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999999998 9999999876
No 22
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.91 E-value=2.8e-25 Score=171.21 Aligned_cols=94 Identities=24% Similarity=0.271 Sum_probs=84.1
Q ss_pred HHHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-HH
Q 033926 9 KDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI-NH 83 (108)
Q Consensus 9 ~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~-~~ 83 (108)
.++...+|+|||++++++++..|++||+|+|++|||||||||++.+++..+.++|.. .++ +||||+|+ ++ +.
T Consensus 30 ~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~~---~vv~aSsGN~g~alA~~a~~ 106 (360)
T 2d1f_A 30 TPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQR---AVLCASTGNTSASAAAYAAR 106 (360)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCS---EEEECCSSHHHHHHHHHHHH
T ss_pred CccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCCC---EEEEeCCcHHHHHHHHHHHH
Confidence 356677899999999988776688999999999999999999999999999988742 333 99999999 99 99
Q ss_pred cCCcEEEEecCC-CCHHHHhhcc
Q 033926 84 KNYAMNSVFLFS-VNVNNFNQAH 105 (108)
Q Consensus 84 ~G~~~~ivvp~~-~~~~k~~~~~ 105 (108)
+|++|+||||++ +++.|+++++
T Consensus 107 ~G~~~~i~~p~~~~~~~k~~~~~ 129 (360)
T 2d1f_A 107 AGITCAVLIPQGKIAMGKLAQAV 129 (360)
T ss_dssp HTCEEEEEECSSCCCHHHHHHHH
T ss_pred cCCcEEEEEcCCCCCHHHHHHHH
Confidence 999999999998 9999999876
No 23
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=99.91 E-value=5.3e-25 Score=166.63 Aligned_cols=90 Identities=18% Similarity=0.127 Sum_probs=80.5
Q ss_pred cccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-HHcCCc
Q 033926 13 ELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI-NHKNYA 87 (108)
Q Consensus 13 ~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~-~~~G~~ 87 (108)
..+++|||++++++++..|.+||+|+|++|||||||||++.+++..+.++|. . .++ |||||+|+ ++ +.+|++
T Consensus 3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~--~-~vv~~ssGN~g~alA~~a~~~G~~ 79 (318)
T 2rkb_A 3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC--R-HLVCSSGGNAGIAAAYAARKLGIP 79 (318)
T ss_dssp CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC--C-EEEECCCSHHHHHHHHHHHHHTCC
T ss_pred CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC--C-EEEEECCchHHHHHHHHHHHcCCC
Confidence 3578999999998876667899999999999999999999999999988762 2 333 99999999 99 999999
Q ss_pred EEEEecCCCCHHHHhhcc
Q 033926 88 MNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 88 ~~ivvp~~~~~~k~~~~~ 105 (108)
|+||||+++|+.|+++++
T Consensus 80 ~~i~~p~~~~~~k~~~~~ 97 (318)
T 2rkb_A 80 ATIVLPESTSLQVVQRLQ 97 (318)
T ss_dssp EEEEECTTCCHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHH
Confidence 999999999999999875
No 24
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=99.91 E-value=3.2e-25 Score=170.12 Aligned_cols=94 Identities=24% Similarity=0.244 Sum_probs=83.9
Q ss_pred HHHhcccCCCceeEccCccCCCCce--EEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-
Q 033926 9 KDVTELIGHTPMVYLNNVVDGCVAH--IAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI- 81 (108)
Q Consensus 9 ~~i~~~v~~TPLv~~~~l~~~~~~~--i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~- 81 (108)
.++...+|+|||++++++++..|.+ ||+|+|++|||||||||++.+++..+.++|.. .++ +||||+|+ ++
T Consensus 22 ~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~~---~vv~~SsGN~g~alA~~a 98 (352)
T 2zsj_A 22 PIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGKR---AVICASTGNTSASAAAYA 98 (352)
T ss_dssp CCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCC---EEEECCSSHHHHHHHHHH
T ss_pred CceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCCC---EEEEeCCchHHHHHHHHH
Confidence 4567789999999999887666777 99999999999999999999999999988742 333 99999999 99
Q ss_pred HHcCCcEEEEecCC-CCHHHHhhcc
Q 033926 82 NHKNYAMNSVFLFS-VNVNNFNQAH 105 (108)
Q Consensus 82 ~~~G~~~~ivvp~~-~~~~k~~~~~ 105 (108)
+.+|++|+||||++ +++.|+++++
T Consensus 99 ~~~G~~~~i~~p~~~~~~~k~~~~~ 123 (352)
T 2zsj_A 99 ARAGLRAYVLLPKGAVAIGKLSQAM 123 (352)
T ss_dssp HHHTCEEEEEEEGGGCCHHHHHHHH
T ss_pred HhcCCcEEEEECCCCCCHHHHHHHH
Confidence 99999999999998 9999998876
No 25
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=99.91 E-value=3.6e-25 Score=178.43 Aligned_cols=95 Identities=20% Similarity=0.133 Sum_probs=84.4
Q ss_pred HHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-HH-HHcC
Q 033926 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK-LI-NHKN 85 (108)
Q Consensus 10 ~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al-~~-~~~G 85 (108)
++.+.+++|||++++++++..|++||+|+|++|||||||||+|++++..+.+++ ...+++. +||||+|+ ++ +.+|
T Consensus 24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~-~~~gVV~aSsGNhg~avA~aa~~lG 102 (514)
T 1tdj_A 24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ-KAHGVITASAGNHAQGVAFSSARLG 102 (514)
T ss_dssp CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSS-CSSSCEEEECSSSHHHHHHHHHHTT
T ss_pred hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhc-CCCEEEEECCcHHHHHHHHHHHHcC
Confidence 577889999999999888777899999999999999999999999999886553 3345443 99999999 99 9999
Q ss_pred CcEEEEecCCCCHHHHhhcc
Q 033926 86 YAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 86 ~~~~ivvp~~~~~~k~~~~~ 105 (108)
++|+||||+++|+.|+++++
T Consensus 103 i~~~IvmP~~~p~~Kv~~~r 122 (514)
T 1tdj_A 103 VKALIVMPTATADIKVDAVR 122 (514)
T ss_dssp CCEEEECCSSCCHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHH
Confidence 99999999999999999875
No 26
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=99.91 E-value=1.3e-24 Score=172.00 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=79.8
Q ss_pred cCCCceeEccCcc----CCC----CceEEEEeCCCCC-CcchhhHHHHHHHHH-----HHHcCCCCCCe-----------
Q 033926 15 IGHTPMVYLNNVV----DGC----VAHIAAKLEMMQP-CSSVKDRIAYSMIKD-----AEDKGLITPGK----------- 69 (108)
Q Consensus 15 v~~TPLv~~~~l~----~~~----~~~i~~KlE~~np-tGS~K~R~a~~~l~~-----a~~~g~~~~g~----------- 69 (108)
+++|||+++++++ +.. +++||+|+|++|| |||||||+|.+++.. |++.|.+.+|.
T Consensus 76 ~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r 155 (442)
T 3ss7_X 76 IIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFK 155 (442)
T ss_dssp CCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHH
T ss_pred CCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhh
Confidence 3699999998875 433 4899999999999 999999999999985 78889877653
Q ss_pred -------Ee---cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 70 -------VF---NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 70 -------~v---sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +||||+|+ ++ +.+|++|+||||+++++.|+++++
T Consensus 156 ~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r 203 (442)
T 3ss7_X 156 QFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLR 203 (442)
T ss_dssp HHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH
T ss_pred hhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHH
Confidence 33 99999999 99 999999999999999999999875
No 27
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=99.91 E-value=2.1e-25 Score=172.29 Aligned_cols=95 Identities=20% Similarity=0.167 Sum_probs=82.0
Q ss_pred HHhcccCCCceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe--cchHHHHH-HH-HHcC
Q 033926 10 DVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF--NGNSPILK-LI-NHKN 85 (108)
Q Consensus 10 ~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v--sGN~g~al-~~-~~~G 85 (108)
+|.+.+++|||++++++++..|.+||+|+|++|||||||||+|.+++.++.+++. ..+++. |||||+|+ ++ +.+|
T Consensus 53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~-~~~vv~assGN~g~a~A~aa~~~G 131 (366)
T 3iau_A 53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL-DKGVITASAGNHAQGVALAGQRLN 131 (366)
T ss_dssp CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH-HHCEEEECSSHHHHHHHHHHHHTT
T ss_pred HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC-CCEEEEeCCCHHHHHHHHHHHHhC
Confidence 5678899999999999887778899999999999999999999999987654321 123333 99999999 99 9999
Q ss_pred CcEEEEecCCCCHHHHhhcc
Q 033926 86 YAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 86 ~~~~ivvp~~~~~~k~~~~~ 105 (108)
++|+||||+++++.|+++++
T Consensus 132 ~~~~iv~P~~~~~~k~~~~~ 151 (366)
T 3iau_A 132 CVAKIVMPTTTPQIKIDAVR 151 (366)
T ss_dssp CCEEEEECTTCCHHHHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHH
Confidence 99999999999999999875
No 28
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=99.89 E-value=1.1e-23 Score=164.18 Aligned_cols=94 Identities=12% Similarity=-0.055 Sum_probs=79.5
Q ss_pred cccCCCceeEccCccCCCC-ceEEEEeCCCC-CCcchhhHHHHHHHHHHH--HcCC-------------CCCC-eEe---
Q 033926 13 ELIGHTPMVYLNNVVDGCV-AHIAAKLEMMQ-PCSSVKDRIAYSMIKDAE--DKGL-------------ITPG-KVF--- 71 (108)
Q Consensus 13 ~~v~~TPLv~~~~l~~~~~-~~i~~KlE~~n-ptGS~K~R~a~~~l~~a~--~~g~-------------~~~g-~~v--- 71 (108)
..+++|||++++++++..| .+||+|+|++| |+||||||+|.+++.++. +.|. .... .++
T Consensus 40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS 119 (398)
T 4d9i_A 40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT 119 (398)
T ss_dssp TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence 3578999999998887677 59999999999 999999999999999884 2331 1222 333
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhccc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAHP 106 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~~ 106 (108)
+||||+|+ ++ +.+|++|+||||+++++.|+++++-
T Consensus 120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~ 156 (398)
T 4d9i_A 120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILN 156 (398)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHH
Confidence 99999999 99 9999999999999999999998863
No 29
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=99.89 E-value=5.4e-24 Score=163.06 Aligned_cols=97 Identities=15% Similarity=0.072 Sum_probs=84.1
Q ss_pred hhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCC--CcchhhHHHHHHHHHHHHcCCCCCCeEe--c---chHHHH
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQP--CSSVKDRIAYSMIKDAEDKGLITPGKVF--N---GNSPIL 78 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~np--tGS~K~R~a~~~l~~a~~~g~~~~g~~v--s---GN~g~a 78 (108)
..+++|...+++|||++++++++..|++||+|+|++|| +||||||++.+++..++++|.. .+| | ||||+|
T Consensus 21 ~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~---~vv~~s~tsGN~g~a 97 (342)
T 4d9b_A 21 TRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGAD---TLITAGAIQSNHVRQ 97 (342)
T ss_dssp GGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCC---EEEEEEETTCHHHHH
T ss_pred ccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCC---EEEEcCCcccHHHHH
Confidence 44577888999999999998877668899999999999 9999999999999999998852 333 3 999999
Q ss_pred H-HH-HHcCCcEEEEecCCCCH--------HHHhhcc
Q 033926 79 K-LI-NHKNYAMNSVFLFSVNV--------NNFNQAH 105 (108)
Q Consensus 79 l-~~-~~~G~~~~ivvp~~~~~--------~k~~~~~ 105 (108)
+ ++ +.+|++|+||||+++|+ .|+++++
T Consensus 98 lA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~ 134 (342)
T 4d9b_A 98 TAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD 134 (342)
T ss_dssp HHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHH
T ss_pred HHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHH
Confidence 9 99 99999999999999884 4776654
No 30
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.88 E-value=1.6e-23 Score=162.91 Aligned_cols=95 Identities=13% Similarity=0.054 Sum_probs=78.4
Q ss_pred HHHhcccCC-CceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-H
Q 033926 9 KDVTELIGH-TPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI-N 82 (108)
Q Consensus 9 ~~i~~~v~~-TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~-~ 82 (108)
+.+.+++|+ |||++++++++..|++||+|+|++|||||||||++.+++..+.+.|.. ++++ +||||+|+ ++ +
T Consensus 46 ~~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~~--~vi~e~ssGNhg~a~A~aa~ 123 (396)
T 1qop_B 46 DLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKS--EIIAETGAGQHGVASALASA 123 (396)
T ss_dssp HHHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCC--EEEEEESSSHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCcC--EEEEecCchHHHHHHHHHHH
Confidence 334567886 999999999887789999999999999999999999999999887742 3333 89999999 99 9
Q ss_pred HcCCcEEEEecCC-CCHHH--Hhhcc
Q 033926 83 HKNYAMNSVFLFS-VNVNN--FNQAH 105 (108)
Q Consensus 83 ~~G~~~~ivvp~~-~~~~k--~~~~~ 105 (108)
.+|++|+||||+. ++..| +++++
T Consensus 124 ~~G~~~~i~mp~~~~~~~~~~~~~~~ 149 (396)
T 1qop_B 124 LLGLKCRIYMGAKDVERQSPNVFRMR 149 (396)
T ss_dssp HHTCEEEEEEEHHHHHHCHHHHHHHH
T ss_pred HCCCcEEEEEcCCchhhhhhHHHHHH
Confidence 9999999999995 44433 34443
No 31
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.88 E-value=8.5e-24 Score=163.53 Aligned_cols=96 Identities=16% Similarity=0.079 Sum_probs=78.0
Q ss_pred HHHHhcccCC-CceeEccCccCCCC-ceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH
Q 033926 8 KKDVTELIGH-TPMVYLNNVVDGCV-AHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI 81 (108)
Q Consensus 8 ~~~i~~~v~~-TPLv~~~~l~~~~~-~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~ 81 (108)
.+.+.+++++ |||++++++++..| ++||+|+|++|||||||||++.+++..+.+.|.. ++++ |||||+|+ ++
T Consensus 40 ~~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~--~vv~~~ssGN~g~a~A~a 117 (388)
T 1v8z_A 40 NYYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGKT--RLIAETGAGQHGVATAMA 117 (388)
T ss_dssp HHHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCC--EEEEEESSSHHHHHHHHH
T ss_pred HHHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCC--EEEEecCchHHHHHHHHH
Confidence 3455668886 99999998876665 8999999999999999999999999988887742 3333 89999999 99
Q ss_pred -HHcCCcEEEEecCC-CCH--HHHhhcc
Q 033926 82 -NHKNYAMNSVFLFS-VNV--NNFNQAH 105 (108)
Q Consensus 82 -~~~G~~~~ivvp~~-~~~--~k~~~~~ 105 (108)
+.+|++|+||||+. .+. .|+++++
T Consensus 118 a~~~G~~~~iv~p~~~~~~~~~~~~~~~ 145 (388)
T 1v8z_A 118 GALLGMKVDIYMGAEDVERQKMNVFRMK 145 (388)
T ss_dssp HHHTTCEEEEEEEHHHHTTCHHHHHHHH
T ss_pred HHHcCCcEEEEEcCCchhhhhhHHHHHH
Confidence 99999999999985 332 3445543
No 32
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=99.88 E-value=1.1e-23 Score=160.91 Aligned_cols=96 Identities=14% Similarity=0.055 Sum_probs=83.5
Q ss_pred hHHHHhcccCCCceeEccCccCCC-C-ceEEEEeCCCC-C--CcchhhHHHHHHHHHHHHcCCCCCCeEe-----cchHH
Q 033926 7 IKKDVTELIGHTPMVYLNNVVDGC-V-AHIAAKLEMMQ-P--CSSVKDRIAYSMIKDAEDKGLITPGKVF-----NGNSP 76 (108)
Q Consensus 7 ~~~~i~~~v~~TPLv~~~~l~~~~-~-~~i~~KlE~~n-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~v-----sGN~g 76 (108)
.++++...+++|||++++++++.. | .+||+|+|++| | +||||||++.++|.+|.++|.. .+| +||||
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~~---~vv~~G~ssGN~g 81 (341)
T 1f2d_A 5 KFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYT---HLVSIGGRQSNQT 81 (341)
T ss_dssp SSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCS---EEEEEEETTCHHH
T ss_pred cCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCC---EEEEcCCcchHHH
Confidence 345678889999999999887766 7 89999999999 9 9999999999999999988742 333 89999
Q ss_pred HHH-HH-HHcCCcEEEEecCCCC-----HH------HHhhcc
Q 033926 77 ILK-LI-NHKNYAMNSVFLFSVN-----VN------NFNQAH 105 (108)
Q Consensus 77 ~al-~~-~~~G~~~~ivvp~~~~-----~~------k~~~~~ 105 (108)
+|+ ++ +.+|++|+||||++++ ++ |+++++
T Consensus 82 ~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~ 123 (341)
T 1f2d_A 82 RMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSR 123 (341)
T ss_dssp HHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHH
T ss_pred HHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHH
Confidence 999 99 9999999999999998 44 777765
No 33
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=99.88 E-value=1.7e-23 Score=159.17 Aligned_cols=97 Identities=21% Similarity=0.068 Sum_probs=83.9
Q ss_pred hHHHHhcccCCCceeEccCccCCC-C-ceEEEEeCCCC-C--CcchhhHHHHHHHHHHHHcCCCCCCeE---e-cchHHH
Q 033926 7 IKKDVTELIGHTPMVYLNNVVDGC-V-AHIAAKLEMMQ-P--CSSVKDRIAYSMIKDAEDKGLITPGKV---F-NGNSPI 77 (108)
Q Consensus 7 ~~~~i~~~v~~TPLv~~~~l~~~~-~-~~i~~KlE~~n-p--tGS~K~R~a~~~l~~a~~~g~~~~g~~---v-sGN~g~ 77 (108)
.+.++...+++|||++++++++.. + .+||+|+|++| | +||||||++.+++..+.++|.. +++ . +||||+
T Consensus 5 ~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~~--~vv~~GassGN~g~ 82 (338)
T 1tzj_A 5 RFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD--TLVSIGGIQSNQTR 82 (338)
T ss_dssp GSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTCC--EEEEEEETTCHHHH
T ss_pred cCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCC--EEEEcCCchhHHHH
Confidence 356788899999999999887666 7 89999999996 8 9999999999999999988742 233 1 999999
Q ss_pred HH-HH-HHcCCcEEEEecCCCCHH--------HHhhcc
Q 033926 78 LK-LI-NHKNYAMNSVFLFSVNVN--------NFNQAH 105 (108)
Q Consensus 78 al-~~-~~~G~~~~ivvp~~~~~~--------k~~~~~ 105 (108)
|+ ++ +.+|++|+||||++++++ |+++++
T Consensus 83 alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~ 120 (338)
T 1tzj_A 83 QVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSR 120 (338)
T ss_dssp HHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHH
T ss_pred HHHHHHHHhCCceEEEecCCCCccccccccCccHHHHH
Confidence 99 99 999999999999999876 877765
No 34
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=99.88 E-value=4.8e-23 Score=161.04 Aligned_cols=94 Identities=18% Similarity=0.146 Sum_probs=78.7
Q ss_pred HHHhccc---CCCceeEccCccCCCCceEEEEeCCCCC-CcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHHHH-
Q 033926 9 KDVTELI---GHTPMVYLNNVVDGCVAHIAAKLEMMQP-CSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPILK- 79 (108)
Q Consensus 9 ~~i~~~v---~~TPLv~~~~l~~~~~~~i~~KlE~~np-tGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al- 79 (108)
+++.+++ .+|||++++++++. |.+||+|+|++|| |||||||++.+++..+. +.+++|.+| +||||+|+
T Consensus 85 ~~~~~~~g~~~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g~~Iv~assGNhG~AlA 161 (389)
T 1wkv_A 85 PSPLDFFERGKPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKGSLVADATSSNFGVALS 161 (389)
T ss_dssp SSHHHHHHHSCSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTTCEEEEECCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcCCEEEEECCcHHHHHHH
Confidence 4444444 46999999998765 8899999999999 99999999999999854 223333333 99999999
Q ss_pred HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 80 LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 80 ~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
++ +.+|++|+||||+.++++|+.+++
T Consensus 162 ~aaa~~Gl~~~ivmp~~~~~~k~~~~~ 188 (389)
T 1wkv_A 162 AVARLYGYRARVYLPGAAEEFGKLLPR 188 (389)
T ss_dssp HHHHHTTCEEEEEEETTSCHHHHHHHH
T ss_pred HHHHHcCCeEEEEECCCCCHHHHHHHH
Confidence 99 999999999999999999998775
No 35
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=99.87 E-value=4.2e-23 Score=156.76 Aligned_cols=97 Identities=20% Similarity=0.107 Sum_probs=86.1
Q ss_pred hhHHHHhcccCCCceeEccCccCCCCceEEEEeCCCCC--CcchhhHHHHHHHHHHHHcCCCCCCeEe-----cchHHHH
Q 033926 6 EIKKDVTELIGHTPMVYLNNVVDGCVAHIAAKLEMMQP--CSSVKDRIAYSMIKDAEDKGLITPGKVF-----NGNSPIL 78 (108)
Q Consensus 6 ~~~~~i~~~v~~TPLv~~~~l~~~~~~~i~~KlE~~np--tGS~K~R~a~~~l~~a~~~g~~~~g~~v-----sGN~g~a 78 (108)
..++++...+++|||++++++++..|++||+|+|++|| +||+|||.+.+++..++++|.. .++ +||||+|
T Consensus 10 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~~---~vv~~G~ssGN~g~a 86 (325)
T 1j0a_A 10 AKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGAD---VVITVGAVHSNHAFV 86 (325)
T ss_dssp TTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCS---EEEEECCTTCHHHHH
T ss_pred ccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCCC---EEEEcCCcchHHHHH
Confidence 34567788899999999998876668899999999999 9999999999999999998842 333 8999999
Q ss_pred H-HH-HHcCCcEEEEecCCC-CHHHHhhcc
Q 033926 79 K-LI-NHKNYAMNSVFLFSV-NVNNFNQAH 105 (108)
Q Consensus 79 l-~~-~~~G~~~~ivvp~~~-~~~k~~~~~ 105 (108)
+ ++ +.+|++|+||||+++ ++.|+++++
T Consensus 87 lA~~a~~~G~~~~iv~p~~~~~~~k~~~~~ 116 (325)
T 1j0a_A 87 TGLAAKKLGLDAILVLRGKEELKGNYLLDK 116 (325)
T ss_dssp HHHHHHHTTCEEEEEEESCCCSCHHHHHHH
T ss_pred HHHHHHHhCCcEEEEECCCCCCCchHHHHH
Confidence 9 99 999999999999999 999998876
No 36
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=99.87 E-value=4.8e-23 Score=161.70 Aligned_cols=91 Identities=12% Similarity=-0.028 Sum_probs=74.8
Q ss_pred cccCC-CceeEccCccCCC-CceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-HHcC
Q 033926 13 ELIGH-TPMVYLNNVVDGC-VAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI-NHKN 85 (108)
Q Consensus 13 ~~v~~-TPLv~~~~l~~~~-~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~-~~~G 85 (108)
+++++ |||++++++++.. +++||+|+|++|||||||||++.+++..+.+.|.. ++++ +||||+|+ ++ +.+|
T Consensus 72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~~--~vI~~~ssGNhg~avA~aaa~~G 149 (418)
T 1x1q_A 72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGKR--RVIAETGAGQHGVSVATVAALFG 149 (418)
T ss_dssp HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTCC--EEEEECSSSHHHHHHHHHHHHHT
T ss_pred cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCCC--EEEEecCchHHHHHHHHHHHHcC
Confidence 57765 9999999887766 58999999999999999999999999988877632 3443 89999999 99 9999
Q ss_pred CcEEEEecCCCCH---HHHhhcc
Q 033926 86 YAMNSVFLFSVNV---NNFNQAH 105 (108)
Q Consensus 86 ~~~~ivvp~~~~~---~k~~~~~ 105 (108)
++|+||||+..++ .|+++++
T Consensus 150 i~~~I~mp~~~~~~~~~kv~~~~ 172 (418)
T 1x1q_A 150 LECVVYMGEEDVRRQALNVFRMK 172 (418)
T ss_dssp CEEEEEEEHHHHHTCHHHHHHHH
T ss_pred CCEEEEECCCcchhhhHHHHHHH
Confidence 9999999986322 4555543
No 37
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.87 E-value=1.5e-22 Score=159.41 Aligned_cols=83 Identities=13% Similarity=-0.001 Sum_probs=72.1
Q ss_pred HhcccCC-CceeEccCccCCC-CceEEEEeCCCCCCcchhhHHHHHHHHHHHHcCCCCCCeEe---cchHHHHH-HH-HH
Q 033926 11 VTELIGH-TPMVYLNNVVDGC-VAHIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGKVF---NGNSPILK-LI-NH 83 (108)
Q Consensus 11 i~~~v~~-TPLv~~~~l~~~~-~~~i~~KlE~~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v---sGN~g~al-~~-~~ 83 (108)
+.+++|+ |||++++++++.. +.+||+|+|++|||||||||++.+++..+.+.|.. ++++ +||||+|+ ++ +.
T Consensus 74 ~~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~~--~vI~~~ssGNhG~A~A~aaa~ 151 (422)
T 2o2e_A 74 QANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGKT--RVIAETGAGQHGVATATACAL 151 (422)
T ss_dssp TTTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTCC--EEEEEESSSHHHHHHHHHHHH
T ss_pred HHHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCCC--eEEEecCccHHHHHHHHHHHH
Confidence 3557766 9999999998776 58999999999999999999999999988887732 3333 89999999 99 99
Q ss_pred cCCcEEEEecCC
Q 033926 84 KNYAMNSVFLFS 95 (108)
Q Consensus 84 ~G~~~~ivvp~~ 95 (108)
+|++|+||||+.
T Consensus 152 ~G~~~~I~mp~~ 163 (422)
T 2o2e_A 152 LGLDCVIYMGGI 163 (422)
T ss_dssp HTCEEEEEEEHH
T ss_pred cCCcEEEEeCCC
Confidence 999999999986
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.85 E-value=1.3e-21 Score=156.43 Aligned_cols=91 Identities=9% Similarity=0.006 Sum_probs=75.4
Q ss_pred ccCCCceeEccCccCC-CC-ceEEEEeCCCCCCcchhhHHHHHHHHHHHH---cCCCCCCeEe---cchHHHHH-HH-HH
Q 033926 14 LIGHTPMVYLNNVVDG-CV-AHIAAKLEMMQPCSSVKDRIAYSMIKDAED---KGLITPGKVF---NGNSPILK-LI-NH 83 (108)
Q Consensus 14 ~v~~TPLv~~~~l~~~-~~-~~i~~KlE~~nptGS~K~R~a~~~l~~a~~---~g~~~~g~~v---sGN~g~al-~~-~~ 83 (108)
.+|+|||++++++++. .| .+||+|+|++|||||||||++.+++..+.+ +|. ....++ |||||+|+ ++ +.
T Consensus 127 ~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~-g~~~Vv~aSsGNtG~AlA~~a~~ 205 (486)
T 1e5x_A 127 FEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR-PVVGVGCASTGDTSAALSAYCAS 205 (486)
T ss_dssp CCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC-CCCEEEECCCSHHHHHHHHHHHH
T ss_pred cCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC-CCeEEEEcCCCHHHHHHHHHHHH
Confidence 3778999999988765 56 489999999999999999999888766544 431 112233 99999999 88 99
Q ss_pred cCCcEEEEecCC-CCHHHHhhcc
Q 033926 84 KNYAMNSVFLFS-VNVNNFNQAH 105 (108)
Q Consensus 84 ~G~~~~ivvp~~-~~~~k~~~~~ 105 (108)
+|++|+||||++ +++.|+.+++
T Consensus 206 ~Gi~~~I~~P~~~~s~~k~~~~~ 228 (486)
T 1e5x_A 206 AGIPSIVFLPANKISMAQLVQPI 228 (486)
T ss_dssp HTCCEEEEEEGGGCCHHHHHHHH
T ss_pred cCCeEEEEECCCCCCHHHHHHHH
Confidence 999999999997 9999999875
No 39
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=99.78 E-value=4e-19 Score=143.19 Aligned_cols=86 Identities=10% Similarity=0.005 Sum_probs=68.7
Q ss_pred ccCCCceeE--ccCccCCCCceEEEEeCCCCCCcchhhHHHHHH---HHHHH-HcCC-----CCCCeEe----cchHHHH
Q 033926 14 LIGHTPMVY--LNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSM---IKDAE-DKGL-----ITPGKVF----NGNSPIL 78 (108)
Q Consensus 14 ~v~~TPLv~--~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~---l~~a~-~~g~-----~~~g~~v----sGN~g~a 78 (108)
..+.|||++ ++++ .++|+|+|++|||||||||++..+ +..++ ++|. ++++.+| |||||+|
T Consensus 93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~~~Iv~ATSGNtG~A 167 (514)
T 1kl7_A 93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSA 167 (514)
T ss_dssp STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHHHH
T ss_pred CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCCCEEEECCCCcHHHH
Confidence 366799999 7654 579999999999999999999888 44443 3452 3344443 9999999
Q ss_pred H-HH--HHcCCcEEEEecCC-CCHHHHhhc
Q 033926 79 K-LI--NHKNYAMNSVFLFS-VNVNNFNQA 104 (108)
Q Consensus 79 l-~~--~~~G~~~~ivvp~~-~~~~k~~~~ 104 (108)
. ++ +..|++++||||++ +++.+..||
T Consensus 168 A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm 197 (514)
T 1kl7_A 168 AIYGLRGKKDVSVFILYPTGRISPIQEEQM 197 (514)
T ss_dssp HHHHHTTCTTEEEEEEEETTSSCHHHHHHH
T ss_pred HHHHHHhhcCCeEEEEEcCCCCCHHHHHHH
Confidence 6 55 79999999999997 999887777
No 40
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=99.72 E-value=6.2e-18 Score=135.01 Aligned_cols=80 Identities=16% Similarity=0.081 Sum_probs=64.8
Q ss_pred CceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHH---HHHHH-HcCCCCCCeEe--cchHHHH-H-HH-HHcCCcE
Q 033926 18 TPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSM---IKDAE-DKGLITPGKVF--NGNSPIL-K-LI-NHKNYAM 88 (108)
Q Consensus 18 TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~---l~~a~-~~g~~~~g~~v--sGN~g~a-l-~~-~~~G~~~ 88 (108)
|||+++. .++|+|.|++|||||||||++.++ +..+. ++|. ..+++. |||||++ + ++ +.+|+++
T Consensus 94 ~pl~~l~-------~~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~-~~~Vv~ASSGNtG~aa~aa~a~~~Gi~~ 165 (468)
T 4f4f_A 94 CPLVQTD-------ANEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE-RATIVGATSGDTGGAAIEAFGGRDNTDI 165 (468)
T ss_dssp SCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC-CEEEEEECSSHHHHHHHHHHTTCSSEEE
T ss_pred CceEEec-------CCeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEECCchHHHHHHHHHHhccCCcE
Confidence 8998864 259999999999999999999998 77764 5553 222232 9999955 4 55 8899999
Q ss_pred EEEecCC-CCHHHHhhcc
Q 033926 89 NSVFLFS-VNVNNFNQAH 105 (108)
Q Consensus 89 ~ivvp~~-~~~~k~~~~~ 105 (108)
+||||++ +|+.|.++++
T Consensus 166 ~I~~P~~~~s~~k~~~~~ 183 (468)
T 4f4f_A 166 FILFPNGRVSPVQQRQMT 183 (468)
T ss_dssp EEEEETTCSCHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHH
Confidence 9999999 9999998876
No 41
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.71 E-value=1.3e-17 Score=131.35 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=64.1
Q ss_pred CCCceeEccCccCCCCceEEEEeCCC-CCCcchhhHHHHHHH---HHHHHcCCCCCCeE-e---cchHHHHH-H-H-HHc
Q 033926 16 GHTPMVYLNNVVDGCVAHIAAKLEMM-QPCSSVKDRIAYSMI---KDAEDKGLITPGKV-F---NGNSPILK-L-I-NHK 84 (108)
Q Consensus 16 ~~TPLv~~~~l~~~~~~~i~~KlE~~-nptGS~K~R~a~~~l---~~a~~~g~~~~g~~-v---sGN~g~al-~-~-~~~ 84 (108)
++|||+++++ +||+ +|.+ |||||||||++.+++ ..+ .++ ++.+ + |||||+|+ + + +.+
T Consensus 82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~---~~~~Iv~atsGNtG~A~A~~~a~~~ 149 (428)
T 1vb3_A 82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGD---KPVTILTATSGDTGAAVAHAFYGLP 149 (428)
T ss_dssp SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTT---CCEEEEEECSSSHHHHHHHHTTTCT
T ss_pred CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-Hhc---CCCEEEecCCchHHHHHHHHHhhhc
Confidence 6899999863 6999 7888 599999999998874 444 222 2233 3 99999999 7 6 999
Q ss_pred CCcEEEEecC-CCCHHHHhhcc
Q 033926 85 NYAMNSVFLF-SVNVNNFNQAH 105 (108)
Q Consensus 85 G~~~~ivvp~-~~~~~k~~~~~ 105 (108)
|++|+||||+ ++|+.|+++|+
T Consensus 150 G~~~~I~~P~~~~s~~k~~~m~ 171 (428)
T 1vb3_A 150 NVKVVILYPRGKISPLQEKLFC 171 (428)
T ss_dssp TEEEEEEEETTCSCHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHH
Confidence 9999999999 59999998875
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=99.71 E-value=1.9e-17 Score=132.80 Aligned_cols=84 Identities=12% Similarity=0.052 Sum_probs=66.8
Q ss_pred CceeEccCccCCCCceEEEEeCCCCCCcchhhHHHHHH---HHHHH-HcCCCCCCeEe---cchHHHHH-HH-H-HcCCc
Q 033926 18 TPMVYLNNVVDGCVAHIAAKLEMMQPCSSVKDRIAYSM---IKDAE-DKGLITPGKVF---NGNSPILK-LI-N-HKNYA 87 (108)
Q Consensus 18 TPLv~~~~l~~~~~~~i~~KlE~~nptGS~K~R~a~~~---l~~a~-~~g~~~~g~~v---sGN~g~al-~~-~-~~G~~ 87 (108)
|||+++..- .+.++|+|.|++|||||||||++.++ +..+. +.|. ...++ |||||+|. ++ + ..|++
T Consensus 103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~--~~~Vv~ASSGNtG~Aaa~a~~~~~Gi~ 177 (487)
T 3v7n_A 103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE--TLNILGATSGDTGSAAEYAMRGKEGVR 177 (487)
T ss_dssp SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC--CEEEEEECSSHHHHHHHHHHTTCTTEE
T ss_pred ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC--CcEEEEeCChHHHHHHHHHHHhccCCe
Confidence 788887420 01249999999999999999999998 77775 3453 22233 99999998 77 5 99999
Q ss_pred EEEEecCC-CCHHHHhhccc
Q 033926 88 MNSVFLFS-VNVNNFNQAHP 106 (108)
Q Consensus 88 ~~ivvp~~-~~~~k~~~~~~ 106 (108)
++||||++ +|+.|.+||+-
T Consensus 178 ~~I~~P~~~~s~~k~~qm~~ 197 (487)
T 3v7n_A 178 VFMLSPHKKMSAFQTAQMYS 197 (487)
T ss_dssp EEEEEETTCSCHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 99999998 99999998863
No 43
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=79.38 E-value=2.4 Score=27.60 Aligned_cols=20 Identities=5% Similarity=-0.001 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-+|+++ +. ++.|++++||
T Consensus 10 aGpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 10 TGIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCHHHHHHHHHHHHCCCCEEEE
Confidence 99999999 88 9999999887
No 44
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=57.11 E-value=13 Score=27.80 Aligned_cols=37 Identities=5% Similarity=-0.139 Sum_probs=28.9
Q ss_pred HHcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 60 EDKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 60 ~~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
+..|.+.+|..+ .+|.+.|+ .+ +.+|++++++.|+..
T Consensus 138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~ 181 (307)
T 3tpf_A 138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNY 181 (307)
T ss_dssp HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCcc
Confidence 345655435544 78999999 88 999999999999974
No 45
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=53.82 E-value=11 Score=26.93 Aligned_cols=20 Identities=5% Similarity=-0.084 Sum_probs=18.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|.++ +. ++.|++++|+
T Consensus 12 aGpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 12 GGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCHHHHHHHHHHHHCCCcEEEE
Confidence 99999999 88 9999999887
No 46
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=53.58 E-value=12 Score=27.08 Aligned_cols=20 Identities=5% Similarity=-0.135 Sum_probs=19.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|.++ .+ ++.|++++||
T Consensus 9 aGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 9 AGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHhCCCCEEEE
Confidence 99999999 88 9999999988
No 47
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=48.28 E-value=20 Score=23.12 Aligned_cols=23 Identities=13% Similarity=-0.038 Sum_probs=20.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|..|+.+ .. +..|.+++++-..
T Consensus 9 gG~~Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 9 GGPSGLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 99999999 88 9999999999754
No 48
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=47.49 E-value=83 Score=24.75 Aligned_cols=55 Identities=7% Similarity=-0.086 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEe--------cCCCCHHHHhhc
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVF--------LFSVNVNNFNQA 104 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivv--------p~~~~~~k~~~~ 104 (108)
+|+.+.+..+.+ .|..-.|.++ .||-|..+ .. ...|.+++.+- |+..+.+++..+
T Consensus 216 ~Gv~~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l 285 (450)
T 4fcc_A 216 YGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARL 285 (450)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHH
T ss_pred eeHHHHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHH
Confidence 566666766554 3332235544 99999999 77 88999887544 667787776554
No 49
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=46.65 E-value=23 Score=24.94 Aligned_cols=22 Identities=5% Similarity=-0.100 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.++ +. +..|++++|+=.
T Consensus 10 aG~~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 10 TGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcHHHHHHHHHHHHCCCcEEEEEC
Confidence 99999999 88 999999888743
No 50
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=45.21 E-value=60 Score=23.23 Aligned_cols=41 Identities=12% Similarity=0.136 Sum_probs=25.8
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|++. .. +..|.+++++.. +++|++.+
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 181 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHA 181 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 44556777654 46667666 55 888997666553 55666554
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=44.28 E-value=20 Score=26.32 Aligned_cols=23 Identities=4% Similarity=-0.008 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ ++ +..|++++|+=..
T Consensus 31 aG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 31 AGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 99999999 88 9999998888443
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=44.16 E-value=25 Score=24.00 Aligned_cols=23 Identities=13% Similarity=-0.021 Sum_probs=20.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|..|+++ .. +..|++++++=..
T Consensus 11 gG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 11 AGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEecC
Confidence 99999999 88 9999999998654
No 53
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=44.06 E-value=64 Score=23.18 Aligned_cols=44 Identities=14% Similarity=0.082 Sum_probs=27.6
Q ss_pred HHHcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 59 AEDKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 59 a~~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+.+...+++|.++ +|..|++. .. +.+|.+++++. .+++|.+.++
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~ 207 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVD---IDDAKLNLAR 207 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEE---SCHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe---CCHHHHHHHH
Confidence 3444456676654 66677777 55 88899765553 2566666543
No 54
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=43.83 E-value=74 Score=22.69 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=22.1
Q ss_pred HHHcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEe
Q 033926 59 AEDKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 59 a~~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+.+.+.+++|..+ +|..|++. .. +.+|.+++++.
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~ 184 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA 184 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe
Confidence 3345567777764 56677766 55 88899766553
No 55
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=43.02 E-value=22 Score=26.80 Aligned_cols=20 Identities=5% Similarity=-0.002 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 9 aG~~GL~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 9 AGFGGLALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcHHHHHHHHHHHHCCCcEEEE
Confidence 99999999 88 9999999886
No 56
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=42.81 E-value=24 Score=24.99 Aligned_cols=23 Identities=4% Similarity=-0.224 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.+. +. +..|++++|+=..
T Consensus 12 ~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 12 AGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 99999999 88 9999998887443
No 57
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=42.45 E-value=37 Score=25.02 Aligned_cols=28 Identities=4% Similarity=0.025 Sum_probs=22.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFN 102 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~ 102 (108)
.|+.|.++ .. +..|++++++=+ ++++++
T Consensus 14 aG~MG~~iA~~la~~G~~V~l~d~---~~~~~~ 43 (319)
T 2dpo_A 14 SGLVGRSWAMLFASGGFRVKLYDI---EPRQIT 43 (319)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS---CHHHHH
T ss_pred eCHHHHHHHHHHHHCCCEEEEEeC---CHHHHH
Confidence 99999999 88 999999888743 444443
No 58
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=42.38 E-value=83 Score=24.43 Aligned_cols=54 Identities=15% Similarity=0.062 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEe--------cCCCCHHHHhh
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVF--------LFSVNVNNFNQ 103 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivv--------p~~~~~~k~~~ 103 (108)
||++..++.+.+ .|..-.|.++ .||-|..+ -. ..+|.+++.+. |+..+.+++..
T Consensus 199 ~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~ 267 (419)
T 3aoe_E 199 LGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLS 267 (419)
T ss_dssp HHHHHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHH
Confidence 577767666543 4432234443 99999988 67 88898888554 44556665544
No 59
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=42.36 E-value=24 Score=25.75 Aligned_cols=21 Identities=5% Similarity=-0.021 Sum_probs=18.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. +..|++++|+=
T Consensus 12 aG~~Gl~~A~~La~~G~~V~vlE 34 (397)
T 2oln_A 12 GGPVGLATAWQVAERGHRVLVLE 34 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCeEEEEe
Confidence 99999999 88 99999987774
No 60
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=42.15 E-value=83 Score=22.49 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=25.3
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|.+. .. +..|.+++++.. +++|++.+
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 189 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIA 189 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 34456677654 46666666 55 888997665543 45666544
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=41.64 E-value=33 Score=24.35 Aligned_cols=21 Identities=10% Similarity=0.026 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|+.|.++ .. +..|++++++-
T Consensus 12 aG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 12 TGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEe
Confidence 99999999 88 99999888763
No 62
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=40.62 E-value=27 Score=25.16 Aligned_cols=23 Identities=9% Similarity=-0.231 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 25 gG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 25 GGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 99999999 88 9999998888543
No 63
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=39.52 E-value=1.1e+02 Score=23.69 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HH-cCCcEEEEe--------cCCCCHHHHhh
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NH-KNYAMNSVF--------LFSVNVNNFNQ 103 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~-~G~~~~ivv--------p~~~~~~k~~~ 103 (108)
||++..++.+.+ .|..-.|..+ .||-|..+ -. .. +|.+++.+. |+..+++.+..
T Consensus 190 ~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~ 259 (415)
T 2tmg_A 190 RGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIR 259 (415)
T ss_dssp HHHHHHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHH
Confidence 577777776554 4543234443 99999988 56 66 898888554 44456655543
No 64
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=39.08 E-value=77 Score=22.92 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=25.8
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|+++ .. +..|.+++++ .+++|++.+
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~ 190 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYV 190 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHH
Confidence 55667777654 46677766 55 8889975555 356666554
No 65
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=38.65 E-value=71 Score=24.14 Aligned_cols=43 Identities=14% Similarity=0.029 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHH-cCC-CCCCeEe----cchHHHHH-HH-HHcCCcEEEEec
Q 033926 50 RIAYSMIKDAED-KGL-ITPGKVF----NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~-~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
||+.+.++.+.+ .|. .-.|.++ .||-|..+ .. +.+|.+++ +.+
T Consensus 155 ~Gv~~~~~~~~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVv-vsD 205 (355)
T 1c1d_A 155 VGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLL-VAD 205 (355)
T ss_dssp HHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEE-EEe
Confidence 466666666544 453 2245554 99999999 77 89999877 443
No 66
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=38.31 E-value=1e+02 Score=24.14 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEec--------CCCCHHHHhh
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFL--------FSVNVNNFNQ 103 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp--------~~~~~~k~~~ 103 (108)
||++..++.+.+ .|..-.|.++ .||-|..+ -. ..+|.+++.+.. +..+.+++..
T Consensus 216 ~Gv~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~ 284 (440)
T 3aog_A 216 RGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLR 284 (440)
T ss_dssp HHHHHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHH
Confidence 577767666543 4432234443 99999998 66 888988885543 3455555543
No 67
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=38.28 E-value=93 Score=22.66 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=26.6
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|++. .. +.+|.+++++. .+++|++.+
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~ 229 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS---SSREKLDRA 229 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHH
Confidence 45567777654 77777777 55 88999766654 345565544
No 68
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=38.20 E-value=31 Score=24.73 Aligned_cols=22 Identities=5% Similarity=-0.073 Sum_probs=19.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.++ +. +..|++++|+=.
T Consensus 10 ~Gi~Gl~~A~~La~~G~~V~vle~ 33 (372)
T 2uzz_A 10 SGSVGAAAGYYATRAGLNVLMTDA 33 (372)
T ss_dssp TTHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999 88 999999888743
No 69
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=38.08 E-value=82 Score=24.95 Aligned_cols=54 Identities=9% Similarity=-0.019 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEe--------cCCCCHHHHhh
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVF--------LFSVNVNNFNQ 103 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivv--------p~~~~~~k~~~ 103 (108)
+|+...+..+.+ .|..-.|.++ .||-|..+ .. ..+|.+++.+. |+..+++++..
T Consensus 233 ~Gv~~~~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~G~i~dp~Gid~edl~~ 301 (470)
T 2bma_A 233 YGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEF 301 (470)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECEEEETTEEEECSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEEeCCceEECCCCCCHHHHHH
Confidence 566667766554 3422134443 99999988 66 88898877444 45677765543
No 70
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=38.01 E-value=31 Score=24.84 Aligned_cols=23 Identities=4% Similarity=-0.205 Sum_probs=19.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 12 ~G~aGl~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 12 GGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 99999999 88 9999998887443
No 71
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=37.85 E-value=30 Score=25.14 Aligned_cols=21 Identities=14% Similarity=0.072 Sum_probs=18.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. +..|++++|+=
T Consensus 10 aG~aGl~~A~~L~~~G~~v~v~E 32 (394)
T 1k0i_A 10 AGPSGLLLGQLLHKAGIDNVILE 32 (394)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 99999988874
No 72
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=37.75 E-value=27 Score=25.56 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 13 gG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 13 AGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 99999999 88 9999998888544
No 73
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=37.58 E-value=32 Score=24.76 Aligned_cols=22 Identities=9% Similarity=-0.059 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.++ +. +..|++++|+=.
T Consensus 11 aG~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 11 AGSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeC
Confidence 99999999 88 999999888743
No 74
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=37.46 E-value=83 Score=23.84 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=27.6
Q ss_pred CCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 63 GLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 63 g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
..+++|..| +|..|++. .. +..|.+++++. .+++|++.++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~---~~~~~~~~~~ 270 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV---SSPQKAEICR 270 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE---CCHHHHHHHH
Confidence 456677654 47788777 66 88999877776 3677776653
No 75
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=37.38 E-value=34 Score=24.63 Aligned_cols=23 Identities=4% Similarity=-0.107 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++++=..
T Consensus 13 gGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 13 GGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999999 88 9999997776443
No 76
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=37.36 E-value=48 Score=23.63 Aligned_cols=30 Identities=7% Similarity=-0.072 Sum_probs=23.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.|+.|.++ .. +..|++++++ +.++++.+.+
T Consensus 15 ~G~mG~~~a~~l~~~G~~V~~~---dr~~~~~~~~ 46 (303)
T 3g0o_A 15 LGSMGMGAARSCLRAGLSTWGA---DLNPQACANL 46 (303)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEE---ECCHHHHHHH
Confidence 99999999 88 9999998887 3455555543
No 77
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=37.35 E-value=33 Score=24.03 Aligned_cols=20 Identities=10% Similarity=0.172 Sum_probs=18.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. .. +++|+++++|
T Consensus 14 ~GpAGl~aA~~l~~~g~~V~li 35 (312)
T 4gcm_A 14 AGPAGMTAAVYASRANLKTVMI 35 (312)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEE
Confidence 99999998 77 9999999988
No 78
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=37.05 E-value=29 Score=24.12 Aligned_cols=20 Identities=5% Similarity=0.014 Sum_probs=18.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. .. +++|+++++|
T Consensus 12 ~GpAGl~AA~~la~~g~~v~li 33 (314)
T 4a5l_A 12 SGPAAHTAAIYLGRSSLKPVMY 33 (314)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEE
Confidence 99999988 77 8999999887
No 79
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=36.94 E-value=84 Score=24.83 Aligned_cols=55 Identities=9% Similarity=-0.090 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHc-CCCCCCeE--e--cchHHHHH-HH-HHcCCcEEE--------EecCCCCHHHHhh
Q 033926 49 DRIAYSMIKDAEDK-GLITPGKV--F--NGNSPILK-LI-NHKNYAMNS--------VFLFSVNVNNFNQ 103 (108)
Q Consensus 49 ~R~a~~~l~~a~~~-g~~~~g~~--v--sGN~g~al-~~-~~~G~~~~i--------vvp~~~~~~k~~~ 103 (108)
-||+...++.+.+. |..-.|.+ | .||-|..+ .. ..+|.+++. +=|+..+.+++..
T Consensus 219 g~Gv~~~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~iyd~~Gld~~~l~~ 288 (456)
T 3r3j_A 219 GYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNY 288 (456)
T ss_dssp HHHHHHHHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEECSSCEEECTTCCCHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHH
Confidence 35677777776553 33223444 3 99999998 76 888888764 4456777777653
No 80
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=36.82 E-value=64 Score=24.19 Aligned_cols=25 Identities=8% Similarity=-0.126 Sum_probs=23.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|.+.|+ .+ +.+|++++++.|+..
T Consensus 166 ~~rva~Sl~~~~~~~G~~v~~~~P~~~ 192 (323)
T 3gd5_A 166 GNNVAHSLLLGCAKVGMSIAVATPEGF 192 (323)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHcCCEEEEECCCcc
Confidence 78999999 88 999999999999974
No 81
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=36.69 E-value=31 Score=24.25 Aligned_cols=20 Identities=10% Similarity=0.172 Sum_probs=17.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. ++.|+++++|
T Consensus 14 aGpAGlsAA~~lar~g~~v~li 35 (304)
T 4fk1_A 14 AGPAGLNASLVLGRARKQIALF 35 (304)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEE
Confidence 99999988 77 8899999887
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=36.67 E-value=33 Score=25.03 Aligned_cols=23 Identities=9% Similarity=-0.032 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. ++.|++++|+=..
T Consensus 14 aG~aGl~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 14 CGIGGAMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 99999999 88 9999999888544
No 83
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=36.51 E-value=1.2e+02 Score=21.86 Aligned_cols=31 Identities=10% Similarity=-0.064 Sum_probs=20.7
Q ss_pred CCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 64 LITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 64 ~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
.+++|..+ +|..|++. .. +.+|.+++++...
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 209 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN 209 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45666654 77777777 55 8899976655433
No 84
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=36.33 E-value=32 Score=25.17 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=18.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|.+++|+
T Consensus 8 aGiaGLsaA~~La~~G~~V~vl 29 (425)
T 3ka7_A 8 AGLGGLLSAARLSKAGHEVEVF 29 (425)
T ss_dssp CBHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCCceEEE
Confidence 99999999 88 9999998887
No 85
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=36.04 E-value=33 Score=24.68 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.++ +. +..|.+++|+=.
T Consensus 14 ~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 14 SGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHhCCCEEEEEec
Confidence 99999999 88 999999888743
No 86
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=35.92 E-value=66 Score=25.10 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecC--------CCCHHHHhhc
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLF--------SVNVNNFNQA 104 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~--------~~~~~k~~~~ 104 (108)
||+...++.+.+ .|..-.|.++ .||-|..+ .. ..+|.+++.+.+. ..+.+.+..+
T Consensus 202 ~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~ 271 (424)
T 3k92_A 202 QGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDK 271 (424)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHH
Confidence 366666666544 3433234443 99999999 76 8889988765544 3556655443
No 87
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=35.56 E-value=53 Score=24.87 Aligned_cols=27 Identities=7% Similarity=-0.005 Sum_probs=21.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCH
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNV 98 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~ 98 (108)
+|..|..+ .+ +.+|++++++-|...++
T Consensus 43 ~G~lg~~~~~aa~~lG~~v~v~d~~~~~p 71 (419)
T 4e4t_A 43 GGQLGRMFCFAAQSMGYRVAVLDPDPASP 71 (419)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSCTTCH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCcCc
Confidence 88999999 88 99999998886654444
No 88
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=35.27 E-value=79 Score=24.55 Aligned_cols=55 Identities=13% Similarity=-0.067 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHH-cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEec--------CCCCHHHHhhc
Q 033926 50 RIAYSMIKDAED-KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFL--------FSVNVNNFNQA 104 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp--------~~~~~~k~~~~ 104 (108)
||++..++.+.+ .|..-.|.++ .||-|..+ -. ..+|.+++.+.+ +..+.+.+..+
T Consensus 191 ~Gv~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~ 260 (421)
T 1v9l_A 191 FGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKN 260 (421)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHH
Confidence 566666665543 3432234433 99999988 66 888988885554 34455555443
No 89
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=35.25 E-value=34 Score=24.86 Aligned_cols=23 Identities=4% Similarity=0.039 Sum_probs=19.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 19 aG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 19 GGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCCEEEEecC
Confidence 99999999 88 9999999888543
No 90
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=34.83 E-value=1e+02 Score=22.20 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=23.1
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEec
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+.+.+++|..+ +|..|.++ .. +..|.+++++..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~ 192 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN 192 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 55566777654 47778777 66 889998766664
No 91
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=34.76 E-value=35 Score=25.04 Aligned_cols=22 Identities=9% Similarity=0.019 Sum_probs=19.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. ++.|++++|+=.
T Consensus 13 aG~aGl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 13 GSISGLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCHHHHHHHHHHHhCCCCEEEEec
Confidence 99999999 88 999999988843
No 92
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=34.69 E-value=72 Score=24.13 Aligned_cols=25 Identities=12% Similarity=-0.076 Sum_probs=22.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|.+.|+ .+ +.+|++++++.|+..
T Consensus 188 ~~nva~Sl~~~~~~~G~~v~~~~P~~~ 214 (340)
T 4ep1_A 188 GNNVCHSLLLASAKVGMHMTVATPVGY 214 (340)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CchhHHHHHHHHHHcCCEEEEECCccc
Confidence 78999999 88 999999999999974
No 93
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=34.57 E-value=80 Score=23.50 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=27.8
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
..|.++ |..+ .+|.+.|+ .+ +.+|++++++-|+..
T Consensus 149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~ 190 (315)
T 1pvv_A 149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGY 190 (315)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccc
Confidence 346553 4443 68999999 88 999999999999975
No 94
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=34.13 E-value=41 Score=22.94 Aligned_cols=22 Identities=9% Similarity=-0.074 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. +..|++++++=+
T Consensus 10 ~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 10 GSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHhCCCCEEEEeC
Confidence 99999999 88 999999998864
No 95
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=34.08 E-value=32 Score=25.82 Aligned_cols=23 Identities=9% Similarity=0.054 Sum_probs=20.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 30 aGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 30 AGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 99999999 88 9999999998644
No 96
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=33.71 E-value=1.1e+02 Score=23.93 Aligned_cols=44 Identities=9% Similarity=-0.128 Sum_probs=30.1
Q ss_pred HHHHHHHHHHH-HcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEec
Q 033926 50 RIAYSMIKDAE-DKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 50 R~a~~~l~~a~-~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
||++..+..+. +.|..-.|.++ .||-|..+ .. ...|.+++.+.+
T Consensus 211 ~Gv~~~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVavsD 261 (449)
T 1bgv_A 211 YGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 261 (449)
T ss_dssp HHHHHHHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEe
Confidence 67777777654 34532234443 99999988 66 888998886554
No 97
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=33.58 E-value=1.5e+02 Score=23.69 Aligned_cols=33 Identities=9% Similarity=-0.044 Sum_probs=25.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe--------cCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF--------LFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv--------p~~~~~~k~~~~ 104 (108)
.||-|..+ .. ..+|.+++.+. |++.+.+++..+
T Consensus 252 ~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~ 294 (501)
T 3mw9_A 252 FGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDF 294 (501)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHH
Confidence 99999999 76 88899888765 467777776543
No 98
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=33.14 E-value=41 Score=26.01 Aligned_cols=21 Identities=5% Similarity=-0.083 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. ++.|++++|+=
T Consensus 19 aGpaGl~~A~~La~~G~~v~vlE 41 (500)
T 2qa1_A 19 AGPAGMMLAGELRLAGVEVVVLE 41 (500)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 99999998874
No 99
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=33.13 E-value=41 Score=25.03 Aligned_cols=22 Identities=5% Similarity=0.007 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|..|.++ .. +..|++++++=+
T Consensus 14 aG~MG~giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 14 SGLVGRSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcHHHHHHHHHHHhCCCeEEEEEC
Confidence 99999999 88 999999999854
No 100
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=32.89 E-value=39 Score=24.90 Aligned_cols=20 Identities=10% Similarity=0.137 Sum_probs=17.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 8 aGiaGLsaA~~La~~G~~V~vl 29 (421)
T 3nrn_A 8 AGLGGLLAGAFLARNGHEIIVL 29 (421)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCeEEEE
Confidence 99999999 88 9999998776
No 101
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=32.82 E-value=1.3e+02 Score=22.61 Aligned_cols=40 Identities=8% Similarity=0.063 Sum_probs=27.3
Q ss_pred CCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 63 GLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 63 g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
..+++|.++ +|..|++. .. +..|.+++++. .+++|++.++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~ 262 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVR 262 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHH
Confidence 456677654 47777777 56 88999877776 3667766553
No 102
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=32.73 E-value=57 Score=22.74 Aligned_cols=21 Identities=5% Similarity=0.015 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
.|+.|.++ .. +..|++++++-
T Consensus 11 ~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 11 AGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCHHHHHHHHHHHhCCCcEEEEE
Confidence 99999999 88 88999888774
No 103
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=32.47 E-value=1.4e+02 Score=21.55 Aligned_cols=35 Identities=17% Similarity=0.059 Sum_probs=24.0
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+.+.+++|..| +|..|+.. -. +.+|.+.++++...
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 44556676654 47788777 55 88899887777544
No 104
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=32.47 E-value=1.3e+02 Score=21.26 Aligned_cols=30 Identities=10% Similarity=0.040 Sum_probs=20.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+|..|++. -. +.+|.+++++... ++|.+.+
T Consensus 156 ~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~ 187 (324)
T 3nx4_A 156 SGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYL 187 (324)
T ss_dssp TSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHH
T ss_pred CcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHH
Confidence 58888888 66 8999987777643 3444443
No 105
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=32.47 E-value=1.3e+02 Score=21.20 Aligned_cols=35 Identities=23% Similarity=0.189 Sum_probs=23.5
Q ss_pred HHHHcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEe
Q 033926 58 DAEDKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 58 ~a~~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivv 92 (108)
.+.+.+.+++|..+ .|..|++. -. +.+|.+++++.
T Consensus 133 ~al~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 133 QAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp HHHTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 34455667777764 67777777 55 88899766665
No 106
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=32.42 E-value=1.3e+02 Score=21.42 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=27.3
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
......+|..+ +|--|... .+ +.+|...++++. .+++|++.++
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~ 202 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAK 202 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHH
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHH
Confidence 34445566654 66666666 55 899998877764 3566766544
No 107
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=32.37 E-value=39 Score=23.59 Aligned_cols=22 Identities=5% Similarity=-0.161 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. +..|++++|+=.
T Consensus 30 ~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 30 SGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEECC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEec
Confidence 99999999 88 999999888855
No 108
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=32.37 E-value=55 Score=23.11 Aligned_cols=29 Identities=10% Similarity=-0.014 Sum_probs=22.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~ 103 (108)
.|+.|.++ .. ...|++++++- .++++.+.
T Consensus 11 ~G~mG~~~a~~l~~~G~~V~~~d---~~~~~~~~ 41 (302)
T 2h78_A 11 LGHMGAPMATNLLKAGYLLNVFD---LVQSAVDG 41 (302)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEEC---SSHHHHHH
T ss_pred ecHHHHHHHHHHHhCCCeEEEEc---CCHHHHHH
Confidence 99999999 88 88999888773 34555544
No 109
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=32.36 E-value=44 Score=24.68 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCC-cEEEEe
Q 033926 72 NGNSPILK-LI-NHKNY-AMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~-~~~ivv 92 (108)
+|-.|.+. +. +..|+ +++|+=
T Consensus 14 gG~aGlsaA~~La~~G~~~V~vlE 37 (438)
T 3dje_A 14 AGTWGTSTALHLARRGYTNVTVLD 37 (438)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCHHHHHHHHHHHHcCCCcEEEEe
Confidence 99999999 88 99999 888774
No 110
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=32.27 E-value=44 Score=23.36 Aligned_cols=23 Identities=9% Similarity=0.004 Sum_probs=20.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|+++ .. +..|++++++=+.
T Consensus 11 ~G~aGl~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 11 GGQSGLSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CSHHHHHHHHHHHHSSCCEEEECCS
T ss_pred cCHHHHHHHHHHHHCCCCEEEEECC
Confidence 99999999 88 9999999888654
No 111
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=32.21 E-value=46 Score=22.97 Aligned_cols=23 Identities=9% Similarity=-0.203 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|++. +. +..|++++++=+.
T Consensus 23 ~G~aGl~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 23 LGPAAYGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccHHHHHHHHHHHHCCCcEEEEecc
Confidence 99999999 88 8899998887653
No 112
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=32.04 E-value=1.3e+02 Score=21.74 Aligned_cols=41 Identities=5% Similarity=-0.033 Sum_probs=24.7
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|.++ .. +..|.+++++.. +++|.+.+
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 208 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEAC 208 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Confidence 45566777654 45566666 55 888997655542 45555543
No 113
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=31.98 E-value=87 Score=23.16 Aligned_cols=35 Identities=9% Similarity=-0.130 Sum_probs=27.7
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
..|.++ |..+ .+|.+.|+ .+ +.+|++++++-|+..
T Consensus 148 ~~g~l~-gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~ 189 (301)
T 2ef0_A 148 VFGGLA-GLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGY 189 (301)
T ss_dssp HHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred HhCCcC-CcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchh
Confidence 346553 4443 68999999 88 999999999999975
No 114
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=31.94 E-value=1.1e+02 Score=22.01 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=25.3
Q ss_pred HHcCCCCCCeEe----cchHHHHH-HH-HHcCC-cEEEEecCCCCHHHHhhc
Q 033926 60 EDKGLITPGKVF----NGNSPILK-LI-NHKNY-AMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 60 ~~~g~~~~g~~v----sGN~g~al-~~-~~~G~-~~~ivvp~~~~~~k~~~~ 104 (108)
.+...+++|..+ +|..|++. .. +.+|. ++++ +. .+++|++.+
T Consensus 159 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~-~~--~~~~~~~~~ 207 (352)
T 3fpc_A 159 AELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFA-VG--SRKHCCDIA 207 (352)
T ss_dssp HHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEE-EC--CCHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEE-EC--CCHHHHHHH
Confidence 344456666644 77777777 55 88898 4444 32 345666554
No 115
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=31.92 E-value=36 Score=24.96 Aligned_cols=23 Identities=4% Similarity=-0.052 Sum_probs=20.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ .. ++.|++++|+=..
T Consensus 34 aG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 34 GGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 99999999 88 9999999988544
No 116
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=31.91 E-value=46 Score=23.10 Aligned_cols=24 Identities=4% Similarity=0.157 Sum_probs=20.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+|-.|++. .. +..|++++++=+..
T Consensus 15 ~G~aGl~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 15 GGPVGLFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 99999999 88 88999999886653
No 117
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=31.89 E-value=40 Score=23.24 Aligned_cols=23 Identities=9% Similarity=-0.075 Sum_probs=19.4
Q ss_pred cchHHHHHHHHHcCCcEEEEecC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~ 94 (108)
.|.+.+|+.|+.+|+++.|+.|.
T Consensus 72 iGT~~~Al~Ak~~~vPf~V~a~~ 94 (191)
T 1w2w_B 72 IGTLQLAVICKQFGIKFFVVAPK 94 (191)
T ss_dssp TTHHHHHHHHHHHTCEEEEECCG
T ss_pred ccHHHHHHHHHHcCCCEEEeccc
Confidence 88888887777779999999875
No 118
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=31.76 E-value=67 Score=23.86 Aligned_cols=25 Identities=4% Similarity=-0.175 Sum_probs=22.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|.+.|+ .+ +.+|++++++-|+..
T Consensus 163 ~~~va~Sl~~~~~~~G~~v~~~~P~~~ 189 (309)
T 4f2g_A 163 ANNMLYTWIQAARILDFKLQLSTPPGY 189 (309)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred CcchHHHHHHHHHHcCCEEEEECCccc
Confidence 78999999 88 999999999999864
No 119
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=31.68 E-value=42 Score=25.92 Aligned_cols=21 Identities=5% Similarity=-0.094 Sum_probs=19.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|+++ +. ++.|++++|+=
T Consensus 20 aGpaGl~~A~~La~~G~~v~vlE 42 (499)
T 2qa2_A 20 AGPAGLMLAGELRLGGVDVMVLE 42 (499)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCHHHHHHHHHHHHCCCCEEEEE
Confidence 99999999 88 99999998884
No 120
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=31.65 E-value=69 Score=22.92 Aligned_cols=29 Identities=3% Similarity=-0.081 Sum_probs=22.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~ 103 (108)
.|+.|.++ .. +..|++++++ +.++++.+.
T Consensus 17 ~G~mG~~~A~~l~~~G~~V~~~---dr~~~~~~~ 47 (306)
T 3l6d_A 17 LGAMGTIMAQVLLKQGKRVAIW---NRSPGKAAA 47 (306)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE---CSSHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEE---eCCHHHHHH
Confidence 99999999 88 9999998887 345555543
No 121
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=31.50 E-value=1.4e+02 Score=21.31 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=23.5
Q ss_pred HHHcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 59 AEDKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 59 a~~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+.+...+++|..+ +|..|.+. .. +..|.+++++....
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~ 179 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN 179 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3355567777654 34667666 55 88899877766443
No 122
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=31.20 E-value=59 Score=25.43 Aligned_cols=29 Identities=3% Similarity=-0.047 Sum_probs=22.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~ 103 (108)
.|+.|.++ .. +..|++++++= .++++++.
T Consensus 13 aG~MG~~IA~~la~aG~~V~l~D---~~~e~l~~ 43 (483)
T 3mog_A 13 SGTMGAGIAEVAASHGHQVLLYD---ISAEALTR 43 (483)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC---SCHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCeEEEEE---CCHHHHHH
Confidence 99999999 88 99999988763 45555443
No 123
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=31.10 E-value=1.2e+02 Score=22.17 Aligned_cols=42 Identities=14% Similarity=0.060 Sum_probs=25.3
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+...+++|..+ +|..|++. .. +.+|..-++++. .+++|.+.+
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a 223 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILST--RQATKRRLA 223 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHH
Confidence 44446666654 77777777 55 889985444442 356666544
No 124
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=30.75 E-value=57 Score=25.27 Aligned_cols=31 Identities=10% Similarity=0.204 Sum_probs=25.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
.|..|..+ .. +..|+++++| +.+++|++.+.
T Consensus 19 lGyvGlp~A~~La~~G~~V~~~---D~~~~kv~~L~ 51 (431)
T 3ojo_A 19 LGYIGLPTSIMFAKHGVDVLGV---DINQQTIDKLQ 51 (431)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHH
T ss_pred eCHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHHH
Confidence 99999999 77 9999999887 45778877653
No 125
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=30.63 E-value=1.4e+02 Score=21.77 Aligned_cols=40 Identities=10% Similarity=0.079 Sum_probs=24.7
Q ss_pred cCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 62 KGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 62 ~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.+.+++|..+ +|..|.++ .. +..|.+++++.. +++|.+.+
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~ 204 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFL 204 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHH
Confidence 3456666654 57777777 55 788997555543 35555544
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=30.50 E-value=46 Score=26.31 Aligned_cols=21 Identities=5% Similarity=-0.135 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. ++.|++++|+=
T Consensus 57 aG~aGL~~A~~La~~G~~V~VlE 79 (570)
T 3fmw_A 57 GGPVGLMLAGELRAGGVGALVLE 79 (570)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEB
T ss_pred cCHHHHHHHHHHHHCCCCEEEEc
Confidence 99999999 88 99999998883
No 127
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=30.48 E-value=1.4e+02 Score=21.70 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=23.2
Q ss_pred CCCCCCeEe----cchHHHHH-HH-HHc-CCcEEEEecCCCCHHHHhhcc
Q 033926 63 GLITPGKVF----NGNSPILK-LI-NHK-NYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 63 g~~~~g~~v----sGN~g~al-~~-~~~-G~~~~ivvp~~~~~~k~~~~~ 105 (108)
..+++|..+ .|..|+.. -. +.+ |.+++++.+ +++|++.++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~ 228 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAE 228 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHH
Confidence 456666654 66666665 44 667 987544432 466666543
No 128
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=30.48 E-value=1.4e+02 Score=21.99 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=25.1
Q ss_pred cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 62 KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 62 ~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
...+++|..| +|..|+.. .. +.+|.+.++.+. .+++|++.++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~ 227 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAK 227 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHH
Confidence 3456666654 66667666 55 788985444442 3566666543
No 129
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=30.33 E-value=49 Score=24.28 Aligned_cols=21 Identities=10% Similarity=-0.118 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|.+++|+=
T Consensus 9 aG~aGl~aA~~L~~~G~~V~vlE 31 (431)
T 3k7m_X 9 GGFSGLKAARDLTNAGKKVLLLE 31 (431)
T ss_dssp CBHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEe
Confidence 99999999 88 99999988873
No 130
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=30.05 E-value=48 Score=25.10 Aligned_cols=21 Identities=5% Similarity=-0.035 Sum_probs=18.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.+. +. +..|++++++=
T Consensus 19 aG~~GL~aA~~La~~G~~V~vlE 41 (453)
T 2bcg_G 19 TGITECILSGLLSVDGKKVLHID 41 (453)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCHHHHHHHHHHHHCCCeEEEEe
Confidence 99999999 88 99999988873
No 131
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=29.93 E-value=86 Score=22.97 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=20.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
+|..|++. .. +.+|.+++++. +++|.+.++
T Consensus 174 ~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~ 205 (371)
T 3gqv_A 174 STATATVTMQMLRLSGYIPIATC----SPHNFDLAK 205 (371)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHH
Confidence 47788887 66 88999766553 456666543
No 132
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=29.91 E-value=1e+02 Score=23.00 Aligned_cols=45 Identities=13% Similarity=-0.020 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 50 RIAYSMIKDAEDKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 50 R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+.+...|..|.++|..- .+.+ -.|-|.-. +- +..|++++++.+..
T Consensus 152 ~tvl~~l~~A~~~gk~~-~V~v~EtRP~~qGrltA~eL~~~GI~vtlI~Dsa 202 (338)
T 3a11_A 152 KAAISVMKTAWEQGKDI-KVIVTETRPKWQGKITAKELASYGIPVIYVVDSA 202 (338)
T ss_dssp HHHHHHHHHHHHTTCCC-EEEEECCTTTTHHHHHHHHHHHTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHCCCeE-EEEEeCCCCchhhHHHHHHHHhCCCCEEEEehHH
Confidence 55666666666665321 1112 34555333 44 66677777666543
No 133
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=29.90 E-value=48 Score=23.55 Aligned_cols=21 Identities=10% Similarity=-0.168 Sum_probs=18.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
.|+.|.++ .. +..|++++++-
T Consensus 23 ~G~mG~~iA~~la~~G~~V~~~d 45 (302)
T 1f0y_A 23 GGLMGAGIAQVAAATGHTVVLVD 45 (302)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEE
Confidence 99999999 87 88899887764
No 134
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=29.88 E-value=1.4e+02 Score=21.82 Aligned_cols=48 Identities=10% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 52 AYSMIKDAEDKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 52 a~~~l~~a~~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
|+.++..+...|.. +.| +|..|++. -. +.+|.+++++. .+++|.+.++
T Consensus 160 a~~~~~~~~~~g~~---vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~---~~~~~~~~~~ 213 (379)
T 3iup_A 160 ALGMVETMRLEGHS---ALVHTAAASNLGQMLNQICLKDGIKLVNIV---RKQEQADLLK 213 (379)
T ss_dssp HHHHHHHHHHTTCS---CEEESSTTSHHHHHHHHHHHHHTCCEEEEE---SSHHHHHHHH
T ss_pred HHHHHHHhccCCCE---EEEECCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHH
Confidence 55555555444421 333 34555555 44 88899866665 3567766553
No 135
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=29.82 E-value=42 Score=25.86 Aligned_cols=21 Identities=10% Similarity=0.071 Sum_probs=19.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. ++.|++++|+=
T Consensus 13 aG~aGl~~A~~La~~G~~v~viE 35 (535)
T 3ihg_A 13 AGLGGLSTAMFLARQGVRVLVVE 35 (535)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 99999988874
No 136
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=29.64 E-value=43 Score=23.84 Aligned_cols=20 Identities=5% Similarity=-0.134 Sum_probs=17.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.+. +. + .|++++|+=
T Consensus 17 aGi~Gls~A~~La-~G~~V~vlE 38 (381)
T 3nyc_A 17 AGIAGASTGYWLS-AHGRVVVLE 38 (381)
T ss_dssp CSHHHHHHHHHHT-TTSCEEEEC
T ss_pred CcHHHHHHHHHHh-CCCCEEEEE
Confidence 99999999 88 7 699988874
No 137
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=29.55 E-value=48 Score=25.49 Aligned_cols=21 Identities=5% Similarity=-0.048 Sum_probs=18.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|..|++. +. +..|.+++|+=
T Consensus 49 aG~AGl~AA~~aa~~G~~V~vlE 71 (510)
T 4at0_A 49 YGIAGVAASIEAARAGADVLVLE 71 (510)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCcEEEEe
Confidence 99999999 87 88999977763
No 138
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=29.41 E-value=51 Score=24.25 Aligned_cols=23 Identities=9% Similarity=-0.018 Sum_probs=19.9
Q ss_pred cchHHHHH-HH-HHcCCc-EEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYA-MNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~-~~ivvp~ 94 (108)
+|-.|.++ .. +..|++ ++|+=..
T Consensus 12 aG~aGl~~A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 12 AGIGGLSCALALHQAGIGKVTLLESS 37 (410)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 99999999 88 999999 8888543
No 139
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=29.40 E-value=49 Score=26.25 Aligned_cols=36 Identities=8% Similarity=-0.001 Sum_probs=25.2
Q ss_pred EecchHHHHH-HHHHcCC-cEEEEecCCCCHHHHhhccc
Q 033926 70 VFNGNSPILK-LINHKNY-AMNSVFLFSVNVNNFNQAHP 106 (108)
Q Consensus 70 ~vsGN~g~al-~~~~~G~-~~~ivvp~~~~~~k~~~~~~ 106 (108)
.++||.|+.. ..+..|+ +++++.|.- ++.-.+++.|
T Consensus 115 ~~GGnA~imAn~La~lg~~~Vi~~~p~~-sk~~~~ll~~ 152 (474)
T 3drw_A 115 RLGGQAGIIANTLAGLKIRKVIAYTPFL-PKRLAELFKK 152 (474)
T ss_dssp EEESHHHHHHHHHHHTTCSEEEECCSCC-CHHHHTTSCT
T ss_pred ecCChHHHHHHHHHHcCCCcEEEecCcC-CHHHHHhcCC
Confidence 3599999998 4466799 577777764 5544465544
No 140
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=29.37 E-value=43 Score=25.75 Aligned_cols=23 Identities=4% Similarity=-0.206 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 15 gG~aGl~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 15 GGPGGSTLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred cCHHHHHHHHHHHhCCCCEEEEccC
Confidence 99999999 88 9999999888443
No 141
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=29.24 E-value=48 Score=24.96 Aligned_cols=20 Identities=10% Similarity=0.300 Sum_probs=18.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 19 aG~aGl~aA~~L~~~g~~v~v~ 40 (489)
T 2jae_A 19 GGPAGLCSAFELQKAGYKVTVL 40 (489)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEE
Confidence 99999999 88 9999998887
No 142
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=29.24 E-value=49 Score=23.89 Aligned_cols=22 Identities=5% Similarity=0.055 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HH-cC-CcEEEEec
Q 033926 72 NGNSPILK-LI-NH-KN-YAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~-~G-~~~~ivvp 93 (108)
+|-.|.++ +. +. .| .+++|+=.
T Consensus 29 ~G~~Gl~~A~~La~~~G~~~V~vlE~ 54 (405)
T 2gag_B 29 GGGHGLATAYFLAKNHGITNVAVLEK 54 (405)
T ss_dssp CSHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred cCHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999999 88 88 89 89888743
No 143
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=28.87 E-value=70 Score=21.15 Aligned_cols=24 Identities=25% Similarity=0.167 Sum_probs=17.0
Q ss_pred HHHH-HH-HHcCCcEEEEecCCCCHH
Q 033926 76 PILK-LI-NHKNYAMNSVFLFSVNVN 99 (108)
Q Consensus 76 g~al-~~-~~~G~~~~ivvp~~~~~~ 99 (108)
++++ ++ +.+|.++.++.|...+++
T Consensus 20 a~al~~~l~~~g~~~~~~~~~~~~~~ 45 (188)
T 1wpn_A 20 AIAYADLKNKLGFNAEPVRLGQVNGE 45 (188)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCCCHH
T ss_pred HHHHHHHHHHhCCceEEEECCCCCHH
Confidence 4455 55 777888888888877754
No 144
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=28.81 E-value=50 Score=26.57 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=19.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.+. +. +..|++++|+=.
T Consensus 272 gGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 272 GGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CcHHHHHHHHHHHHCCCcEEEEeC
Confidence 99999999 88 999999988854
No 145
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=28.70 E-value=1.1e+02 Score=22.53 Aligned_cols=24 Identities=8% Similarity=-0.200 Sum_probs=22.3
Q ss_pred chHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
+|.+.|+ .+ +.+|++++++-|+..
T Consensus 159 ~rva~Sl~~~~~~~g~~v~~~~P~~~ 184 (307)
T 2i6u_A 159 NNMAHSLLLGGVTAGIHVTVAAPEGF 184 (307)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred cCcHHHHHHHHHHCCCEEEEECCccc
Confidence 6999999 88 999999999999975
No 146
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=28.59 E-value=57 Score=24.27 Aligned_cols=23 Identities=13% Similarity=-0.029 Sum_probs=20.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|+.|.++ .. +..|.+++++..+
T Consensus 37 aG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 37 AGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred ccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999999 88 9999999988753
No 147
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=28.47 E-value=49 Score=24.45 Aligned_cols=22 Identities=9% Similarity=-0.094 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHc--CCcEEEEec
Q 033926 72 NGNSPILK-LI-NHK--NYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~--G~~~~ivvp 93 (108)
+|-.|.++ +. +.. |++++|+=.
T Consensus 44 aGi~Gls~A~~La~~~pG~~V~vlE~ 69 (405)
T 3c4n_A 44 AGRMGAACAFYLRQLAPGRSLLLVEE 69 (405)
T ss_dssp CSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CcHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 99999999 88 888 999887743
No 148
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=28.45 E-value=60 Score=24.00 Aligned_cols=24 Identities=8% Similarity=-0.020 Sum_probs=21.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+|..|..+ .+ +.+|++++++-|..
T Consensus 20 ~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 20 GGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 89999999 88 99999999987653
No 149
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=28.41 E-value=1.5e+02 Score=22.71 Aligned_cols=45 Identities=24% Similarity=0.144 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHH-cCCC-CCCeEe----cchHHHHH-HH-HH-cCCcEEEEecC
Q 033926 50 RIAYSMIKDAED-KGLI-TPGKVF----NGNSPILK-LI-NH-KNYAMNSVFLF 94 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~-~~g~~v----sGN~g~al-~~-~~-~G~~~~ivvp~ 94 (108)
||++..+..+.+ .|.. -.|.++ .||-|..+ -. +. +|.+++.+-+.
T Consensus 192 ~Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~ 245 (419)
T 1gtm_A 192 RGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 245 (419)
T ss_dssp HHHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred hHHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 577767766544 4533 234544 99999999 66 77 99998877543
No 150
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=28.30 E-value=1.3e+02 Score=22.60 Aligned_cols=28 Identities=21% Similarity=0.042 Sum_probs=20.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFN 102 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~ 102 (108)
.||.|..+ -. ..+|.+++ +.. .++++++
T Consensus 181 ~G~VG~~~A~~L~~~GakVv-v~D--~~~~~l~ 210 (364)
T 1leh_A 181 LGNVAKALCKKLNTEGAKLV-VTD--VNKAAVS 210 (364)
T ss_dssp CSHHHHHHHHHHHHTTCEEE-EEC--SCHHHHH
T ss_pred chHHHHHHHHHHHHCCCEEE-EEc--CCHHHHH
Confidence 99999999 77 99999865 443 3455544
No 151
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=28.28 E-value=48 Score=23.31 Aligned_cols=22 Identities=5% Similarity=-0.269 Sum_probs=19.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.|+.|.++ .. +..|++++++-.
T Consensus 9 ~G~mG~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 9 LGIMGGPMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CSTTHHHHHHHHHHHTCCEEEECS
T ss_pred cCHHHHHHHHHHHHCCCeEEEEcC
Confidence 99999999 77 888999888743
No 152
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=28.26 E-value=87 Score=23.05 Aligned_cols=27 Identities=4% Similarity=-0.258 Sum_probs=23.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCH
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNV 98 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~ 98 (108)
.+|.+.|+ .+ +.+|++++++-|+..-+
T Consensus 157 ~~rva~Sl~~~~~~~g~~v~~~~P~~~~p 185 (291)
T 3d6n_B 157 HSRVFRSGAPLLNMFGAKIGVCGPKTLIP 185 (291)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEESCGGGSC
T ss_pred CCchHHHHHHHHHHCCCEEEEECCchhCC
Confidence 58999999 88 99999999999987533
No 153
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=28.23 E-value=58 Score=24.96 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|++. +. +..|+++++|=..
T Consensus 130 gGpAGl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 130 AGPAGLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEecc
Confidence 99999999 88 8899999988554
No 154
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=28.22 E-value=56 Score=25.07 Aligned_cols=21 Identities=5% Similarity=-0.175 Sum_probs=18.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|.++ +. +..|++++++=
T Consensus 11 gGi~G~~~A~~La~~G~~V~llE 33 (501)
T 2qcu_A 11 GGINGAGIAADAAGRGLSVLMLE 33 (501)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCHHHHHHHHHHHhCCCCEEEEE
Confidence 99999999 88 99999988774
No 155
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=28.12 E-value=81 Score=23.19 Aligned_cols=24 Identities=13% Similarity=0.112 Sum_probs=21.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+|..|..+ .+ +.+|++++++-|..
T Consensus 22 ~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 22 GGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 89999999 88 99999999987654
No 156
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=28.07 E-value=76 Score=24.65 Aligned_cols=31 Identities=6% Similarity=0.119 Sum_probs=24.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
.|..|..+ .. +..|.++++| +.+++|++.+.
T Consensus 16 ~G~vG~~lA~~la~~G~~V~~~---d~~~~~v~~l~ 48 (478)
T 2y0c_A 16 SGSVGLVTGACLADIGHDVFCL---DVDQAKIDILN 48 (478)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE---CSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHhCCCEEEEE---ECCHHHHHHHH
Confidence 99999999 88 9999998777 34667776653
No 157
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=27.95 E-value=59 Score=22.71 Aligned_cols=22 Identities=5% Similarity=0.105 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ +. +..|++++++=+
T Consensus 24 ~G~aGl~aA~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 24 AGAAGFSAAVYAARSGFSVAILDK 47 (319)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCHHHHHHHHHHHhCCCcEEEEeC
Confidence 99999999 88 889999888854
No 158
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=27.92 E-value=53 Score=25.61 Aligned_cols=21 Identities=19% Similarity=0.091 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|+++ +. ++.|++++|+=
T Consensus 34 aGpaGl~~A~~La~~G~~V~vlE 56 (549)
T 2r0c_A 34 GGPVGMALALDLAHRQVGHLVVE 56 (549)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 99999988774
No 159
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=27.86 E-value=50 Score=26.06 Aligned_cols=24 Identities=4% Similarity=-0.039 Sum_probs=20.1
Q ss_pred CeEe--cchHHHHH-HH-HHcCCcEEEE
Q 033926 68 GKVF--NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 68 g~~v--sGN~g~al-~~-~~~G~~~~iv 91 (108)
.++| +|-.|.++ +. +..|++++++
T Consensus 34 DVvVIGgGi~G~~~A~~La~rG~~V~Ll 61 (571)
T 2rgh_A 34 DLLIIGGGITGAGVAVQAAASGIKTGLI 61 (571)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 3444 99999999 88 9999998877
No 160
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=27.49 E-value=74 Score=22.91 Aligned_cols=30 Identities=10% Similarity=-0.017 Sum_probs=23.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.|+.|.++ .. +..|++++++- .++++.+.+
T Consensus 39 ~G~mG~~~a~~l~~~G~~V~~~d---r~~~~~~~l 70 (320)
T 4dll_A 39 TGSMGLPMARRLCEAGYALQVWN---RTPARAASL 70 (320)
T ss_dssp CTTTHHHHHHHHHHTTCEEEEEC---SCHHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCeEEEEc---CCHHHHHHH
Confidence 99999999 77 88999988773 455665543
No 161
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=27.49 E-value=60 Score=22.73 Aligned_cols=23 Identities=9% Similarity=0.176 Sum_probs=19.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|+++ .. +..|+++++|=+.
T Consensus 13 ~G~aGl~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 13 AGPTGLFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 99999999 77 8899999888654
No 162
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=27.47 E-value=91 Score=23.10 Aligned_cols=26 Identities=0% Similarity=-0.341 Sum_probs=22.3
Q ss_pred chHHHHH-HH-HHcCCcEEEEecCCCCH
Q 033926 73 GNSPILK-LI-NHKNYAMNSVFLFSVNV 98 (108)
Q Consensus 73 GN~g~al-~~-~~~G~~~~ivvp~~~~~ 98 (108)
+|.+.|+ .+ +.+|++++++.|+...+
T Consensus 159 ~rva~Sl~~~~~~~G~~v~~~~P~~~~~ 186 (304)
T 3r7f_A 159 SRVARSNAEVLTRLGARVLFSGPSEWQD 186 (304)
T ss_dssp CHHHHHHHHHHHHTTCEEEEESCGGGSC
T ss_pred cchHHHHHHHHHHcCCEEEEECCCccCc
Confidence 6799999 88 99999999999986443
No 163
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=27.37 E-value=46 Score=25.13 Aligned_cols=25 Identities=8% Similarity=-0.157 Sum_probs=23.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|.+.|+ .+ +.+|++++++.|+..
T Consensus 184 ~~rva~Sl~~~~~~~G~~v~~~~P~~~ 210 (339)
T 4a8t_A 184 ATQVCFSLGLITTKMGMNFVHFGPEGF 210 (339)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CchhHHHHHHHHHHcCCEEEEECCccc
Confidence 78999999 88 999999999999974
No 164
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=27.22 E-value=92 Score=21.51 Aligned_cols=28 Identities=7% Similarity=-0.196 Sum_probs=20.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFN 102 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~ 102 (108)
.|+.|.++ .. ...|++++++- .++++.+
T Consensus 8 ~G~~G~~~a~~l~~~g~~V~~~~---~~~~~~~ 37 (279)
T 2f1k_A 8 LGLIGASLAGDLRRRGHYLIGVS---RQQSTCE 37 (279)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC---SCHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEE---CCHHHHH
Confidence 89999999 77 88899776663 2344444
No 165
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=27.21 E-value=53 Score=25.32 Aligned_cols=22 Identities=9% Similarity=-0.130 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. +..|++++|+=.
T Consensus 100 gG~aGl~aA~~La~~G~~V~liEk 123 (497)
T 2bry_A 100 AGPCGLRAAVELALLGARVVLVEK 123 (497)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccHHHHHHHHHHHHCCCeEEEEEe
Confidence 99999999 88 999999988843
No 166
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=27.18 E-value=98 Score=20.91 Aligned_cols=36 Identities=14% Similarity=0.173 Sum_probs=23.9
Q ss_pred HHHHHHcCCCCCCeEe-cchHHHHH-HH-HH-c------CCcEEEEecC
Q 033926 56 IKDAEDKGLITPGKVF-NGNSPILK-LI-NH-K------NYAMNSVFLF 94 (108)
Q Consensus 56 l~~a~~~g~~~~g~~v-sGN~g~al-~~-~~-~------G~~~~ivvp~ 94 (108)
|..+.+.|.. ..+ +|+.|.=. ++ .. . +++.++++|-
T Consensus 36 l~~l~~~G~~---~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf 81 (181)
T 2nx2_A 36 LIAFLDEGLE---WILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPF 81 (181)
T ss_dssp HHHHHTTTCC---EEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESS
T ss_pred HHHHHhCCCc---EEEECCCccHHHHHHHHHHHhccccCCceEEEEecc
Confidence 3444455532 334 99999988 66 33 2 5999999994
No 167
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=27.11 E-value=72 Score=24.17 Aligned_cols=30 Identities=10% Similarity=0.022 Sum_probs=23.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.|+.|.++ .. +..|++++++ +.+++|++.+
T Consensus 8 ~G~vG~~~A~~la~~G~~V~~~---d~~~~~~~~l 39 (436)
T 1mv8_A 8 LGYVGAVCAGCLSARGHEVIGV---DVSSTKIDLI 39 (436)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEE---ECCHHHHHHH
Confidence 89999999 77 8899987776 3456666554
No 168
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=27.08 E-value=39 Score=24.11 Aligned_cols=20 Identities=10% Similarity=0.013 Sum_probs=17.9
Q ss_pred cchHHHHH-HH-HH---cCCcEEEE
Q 033926 72 NGNSPILK-LI-NH---KNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~---~G~~~~iv 91 (108)
+|-.|+++ +. +. .|++++||
T Consensus 9 aG~aGl~~A~~L~~~~~~G~~V~v~ 33 (342)
T 3qj4_A 9 AGMTGSLCAALLRRQTSGPLYLAVW 33 (342)
T ss_dssp CSHHHHHHHHHHHSCC-CCEEEEEE
T ss_pred CcHHHHHHHHHHHhhccCCceEEEE
Confidence 99999999 88 88 89988877
No 169
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=27.05 E-value=48 Score=20.99 Aligned_cols=22 Identities=14% Similarity=-0.049 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.|..|..+ .. +..|++++++-.
T Consensus 27 ~G~iG~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 27 CGRLGSLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCHHHHHHHHHHHhCCCeEEEEEC
Confidence 99999999 77 889998887754
No 170
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=26.96 E-value=46 Score=26.63 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.+. +. +..|.+++|+=.
T Consensus 280 gGiaGlsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 280 GGIASALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeC
Confidence 99999999 88 999999988854
No 171
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=26.83 E-value=48 Score=25.26 Aligned_cols=25 Identities=8% Similarity=-0.157 Sum_probs=23.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|.+.|+ .+ +.+|++++++.|+..
T Consensus 162 ~~rva~Sl~~~~~~~G~~v~~~~P~~~ 188 (355)
T 4a8p_A 162 ATQVCFSLGLITTKMGMNFVHFGPEGF 188 (355)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CchhHHHHHHHHHHcCCEEEEECCCcc
Confidence 78999999 88 999999999999974
No 172
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=26.80 E-value=1e+02 Score=19.10 Aligned_cols=29 Identities=7% Similarity=-0.027 Sum_probs=21.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~ 103 (108)
.|..|..+ -. ...|++++++-. ++++.+.
T Consensus 15 ~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~ 45 (140)
T 3fwz_A 15 YGRVGSLLGEKLLASDIPLVVIET---SRTRVDE 45 (140)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES---CHHHHHH
T ss_pred cCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHH
Confidence 89999999 77 889999888864 3444443
No 173
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=26.78 E-value=53 Score=26.20 Aligned_cols=23 Identities=9% Similarity=-0.048 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 31 gG~AGl~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 31 GGPAGSVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCHHHHHHHHHHHcCCCCEEEEcCC
Confidence 99999999 88 9999998888443
No 174
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=26.59 E-value=65 Score=24.82 Aligned_cols=20 Identities=10% Similarity=-0.056 Sum_probs=18.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
.|+.|.++ .. +..|++++++
T Consensus 45 aG~MG~~iA~~la~~G~~V~l~ 66 (463)
T 1zcj_A 45 LGTMGRGIAISFARVGISVVAV 66 (463)
T ss_dssp CSHHHHHHHHHHHTTTCEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEE
Confidence 99999999 88 9999988777
No 175
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=26.54 E-value=79 Score=22.76 Aligned_cols=20 Identities=5% Similarity=-0.061 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|+.|.++ .. +..|.+++++
T Consensus 27 aGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 27 AGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHCCCeEEEE
Confidence 99999999 88 9999999888
No 176
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=26.53 E-value=1.8e+02 Score=20.87 Aligned_cols=30 Identities=7% Similarity=0.015 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+|..|++. .. +.+|.+++++. .+++|++.+
T Consensus 160 ~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~ 191 (346)
T 3fbg_A 160 AGGVGSIATQIAKAYGLRVITTA---SRNETIEWT 191 (346)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHH
Confidence 56666666 55 88898655543 245666654
No 177
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=26.52 E-value=56 Score=24.51 Aligned_cols=24 Identities=8% Similarity=-0.200 Sum_probs=19.8
Q ss_pred cchHHHHHHHHHcCCcEEEEecCC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~~ 95 (108)
.|.+.+|+.|+.+|+|+.|+.|..
T Consensus 230 iGT~~lAl~Ak~~~vPfyV~a~~~ 253 (338)
T 3a11_A 230 IGTALIALTAKEHRVWTMIAAETY 253 (338)
T ss_dssp TTHHHHHHHHHHTTCEEEEECCGG
T ss_pred ccHHHHHHHHHHcCCCEEEecccc
Confidence 788888876688899999998753
No 178
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=26.29 E-value=65 Score=23.10 Aligned_cols=21 Identities=5% Similarity=-0.124 Sum_probs=18.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
.|+.|.++ .. +..|++++++-
T Consensus 29 ~G~mG~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 29 LGIMGKAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccHHHHHHHHHHHHCCCeEEEEe
Confidence 99999999 88 99999888774
No 179
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=26.25 E-value=54 Score=23.88 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHc--CCcEEEEe
Q 033926 72 NGNSPILK-LI-NHK--NYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~--G~~~~ivv 92 (108)
+|-.|.++ .+ ++. |++++|+=
T Consensus 8 aG~aGl~~A~~L~~~~~G~~V~v~E 32 (381)
T 3c4a_A 8 AGPAGLVFASQLKQARPLWAIDIVE 32 (381)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEE
Confidence 99999999 88 888 99988874
No 180
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=26.12 E-value=1.8e+02 Score=20.70 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=24.7
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+...+++|..+ +|..|.++ -. +..|.+++++.. +++|.+.+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~ 196 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLL 196 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 44456666654 46777777 55 778986555442 45565544
No 181
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.00 E-value=83 Score=22.64 Aligned_cols=22 Identities=5% Similarity=-0.136 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.||.|.++ .. ...|.+++++-.
T Consensus 22 ~G~mG~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 22 AGSWGTVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCHHHHHHHHHHHhCCCeEEEEeC
Confidence 99999999 77 889999888754
No 182
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=25.83 E-value=1e+02 Score=22.35 Aligned_cols=42 Identities=10% Similarity=0.096 Sum_probs=24.9
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+...+++|..+ +|..|++. -. +.+|.+.++++. .+++|.+.+
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a 220 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITD--IDEGRLKFA 220 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHH
Confidence 33345566543 77777777 55 889998444442 345665554
No 183
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=25.74 E-value=1.6e+02 Score=21.43 Aligned_cols=32 Identities=16% Similarity=0.013 Sum_probs=23.2
Q ss_pred CCCCeEe--cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 65 ITPGKVF--NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 65 ~~~g~~v--sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.+|+.++ +|..+... ++ +.+|+|+++.-++..
T Consensus 91 ~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~ 126 (365)
T 3s2u_A 91 LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV 126 (365)
T ss_dssp HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh
Confidence 3577776 66666666 77 999999998765543
No 184
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=25.64 E-value=72 Score=21.59 Aligned_cols=23 Identities=4% Similarity=-0.311 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
.||.|.++ .. ...|++++++...
T Consensus 31 ~G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 31 AGAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCHHHHHHHHHHHhCCCEEEEEECC
Confidence 99999999 77 8889998885544
No 185
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=25.46 E-value=68 Score=22.87 Aligned_cols=23 Identities=13% Similarity=0.177 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|+++ +. +..|++++++=..
T Consensus 22 ~G~aGl~aA~~l~~~g~~v~lie~~ 46 (360)
T 3ab1_A 22 GGPTGIFAAFQCGMNNISCRIIESM 46 (360)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCHHHHHHHHHHHhCCCCEEEEecC
Confidence 99999999 88 8899999888543
No 186
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=25.36 E-value=70 Score=22.38 Aligned_cols=23 Identities=4% Similarity=-0.050 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|+++ .. +..|++++++=+.
T Consensus 16 ~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 16 GGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 99999999 77 8899998888654
No 187
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=25.34 E-value=56 Score=22.44 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=19.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|++. .. +..|+++++++.
T Consensus 12 ~G~aGl~aA~~l~~~g~~v~li~e 35 (315)
T 3r9u_A 12 GGPAGLSAGLYATRGGLKNVVMFE 35 (315)
T ss_dssp CSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCCeEEEEe
Confidence 99999999 87 889999999444
No 188
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=25.26 E-value=69 Score=24.08 Aligned_cols=26 Identities=8% Similarity=0.037 Sum_probs=20.7
Q ss_pred CeEe--cchHHHHH-HH-HHcCCcEEEEec
Q 033926 68 GKVF--NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 68 g~~v--sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.++| +|-.|+++ +. +..|.+++|+=.
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G~~V~llEk 57 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEGANVLLLDK 57 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHHHHHHHHHCCCCEEEEEC
Confidence 3444 99999999 88 889999887753
No 189
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=25.07 E-value=1.8e+02 Score=20.37 Aligned_cols=31 Identities=10% Similarity=0.070 Sum_probs=21.0
Q ss_pred cCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEec
Q 033926 62 KGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 62 ~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.+ +++|..+ +|..|.++ .. +..|.+++++..
T Consensus 121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~ 158 (302)
T 1iz0_A 121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS 158 (302)
T ss_dssp TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES
T ss_pred hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45 6666654 47788777 55 888987666553
No 190
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=25.06 E-value=1.9e+02 Score=20.73 Aligned_cols=33 Identities=24% Similarity=0.182 Sum_probs=22.6
Q ss_pred CCCCCC-eEe-----cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 63 GLITPG-KVF-----NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 63 g~~~~g-~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
+.+++| ..+ +|..|+.. -. +.+|.++++++.+.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 202 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCc
Confidence 456677 543 47788777 55 88899877776443
No 191
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=25.03 E-value=96 Score=22.95 Aligned_cols=24 Identities=17% Similarity=-0.068 Sum_probs=22.0
Q ss_pred chHHHHH-HH-HHc-CCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHK-NYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~-G~~~~ivvp~~~ 96 (108)
||.+.|+ .+ +.+ |++++++.|+..
T Consensus 163 ~rva~Sl~~~~~~~~G~~v~~~~P~~~ 189 (306)
T 4ekn_B 163 GRTVHSLVYALSLFENVEMYFVSPKEL 189 (306)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CcHHHHHHHHHHhcCCCEEEEECCccc
Confidence 7999999 88 999 999999999864
No 192
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=24.99 E-value=1.9e+02 Score=20.68 Aligned_cols=39 Identities=10% Similarity=0.046 Sum_probs=24.7
Q ss_pred CCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 63 GLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 63 g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+++|..+ +|..|.++ .. +..|.+++++.. +++|.+.+
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~ 207 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRA 207 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 356666654 57888888 66 888987665543 35555543
No 193
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=24.86 E-value=60 Score=25.36 Aligned_cols=21 Identities=14% Similarity=0.034 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|.+++|+=
T Consensus 129 ~G~aGl~aA~~la~~G~~V~vlE 151 (566)
T 1qo8_A 129 AGSAGFNASLAAKKAGANVILVD 151 (566)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCcEEEEe
Confidence 99999999 88 88999988874
No 194
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=24.76 E-value=51 Score=25.11 Aligned_cols=21 Identities=10% Similarity=0.075 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HH---cCCcEEEEe
Q 033926 72 NGNSPILK-LI-NH---KNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~---~G~~~~ivv 92 (108)
+|-.|.++ +. +. .|++++|+=
T Consensus 10 gG~aGl~~A~~La~~~~~G~~V~lvE 35 (511)
T 2weu_A 10 GGTAGWMTASYLKAAFDDRIDVTLVE 35 (511)
T ss_dssp CHHHHHHHHHHHHHHHGGGSEEEEEE
T ss_pred CCHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 99999999 88 88 899988874
No 195
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=24.75 E-value=2e+02 Score=21.17 Aligned_cols=42 Identities=10% Similarity=-0.092 Sum_probs=24.6
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCC-cEEEEecCCCCHHHHhhcc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNY-AMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~-~~~ivvp~~~~~~k~~~~~ 105 (108)
+...+++|..+ +|..|+.. .. +.+|. +++++.. +++|++.++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~ 227 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLS 227 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHH
Confidence 34456676654 66667666 44 77898 5544432 456665543
No 196
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=24.73 E-value=1.9e+02 Score=20.51 Aligned_cols=41 Identities=15% Similarity=0.116 Sum_probs=26.1
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|.++ -. +..|.+++++. .+++|.+.+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~ 190 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA---GGAEKCRFL 190 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHH
Confidence 55567777654 46777777 55 88899766654 245565544
No 197
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=24.68 E-value=1.3e+02 Score=21.17 Aligned_cols=30 Identities=7% Similarity=-0.056 Sum_probs=21.4
Q ss_pred cchHHHHH-HH-HHcCC-cEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNY-AMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~-~~~ivvp~~~~~~k~~~~ 104 (108)
+|++|.++ ++ ...|+ +++|+- . +++|.+.+
T Consensus 116 aGg~a~ai~~~L~~~G~~~I~v~n-R--~~~ka~~l 148 (253)
T 3u62_A 116 AGGAARAVIYALLQMGVKDIWVVN-R--TIERAKAL 148 (253)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEEE-S--CHHHHHTC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEe-C--CHHHHHHH
Confidence 99999999 88 99999 555553 3 34555443
No 198
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=24.65 E-value=62 Score=24.95 Aligned_cols=23 Identities=4% Similarity=-0.018 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HH---cCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NH---KNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~---~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +. .|++++|+=..
T Consensus 13 gG~aGl~aA~~La~~~~~G~~V~liE~~ 40 (538)
T 2aqj_A 13 GGTAGWMAASYLVRALQQQANITLIESA 40 (538)
T ss_dssp CSHHHHHHHHHHHHHCCSSCEEEEEECS
T ss_pred CCHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 99999999 88 88 89999888543
No 199
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=24.62 E-value=68 Score=24.38 Aligned_cols=22 Identities=5% Similarity=-0.052 Sum_probs=19.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|++. +. +..|.++++|=.
T Consensus 34 gG~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 34 SGSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCHHHHHHHHHHHhCcCEEEEEeC
Confidence 99999999 88 999999988854
No 200
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=24.35 E-value=97 Score=23.07 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=16.8
Q ss_pred CCCCeEe--cchHHHHH-HH---HHcCCcEEEEecCCCC
Q 033926 65 ITPGKVF--NGNSPILK-LI---NHKNYAMNSVFLFSVN 97 (108)
Q Consensus 65 ~~~g~~v--sGN~g~al-~~---~~~G~~~~ivvp~~~~ 97 (108)
+..|.+| -||++..+ .. ...|.++.|++.++-|
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP 157 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQP 157 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTT
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCC
Confidence 3444444 44444444 33 2346666666666644
No 201
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.32 E-value=65 Score=22.54 Aligned_cols=22 Identities=5% Similarity=-0.135 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. +..|++++++=.
T Consensus 16 ~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 16 SGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEECC
T ss_pred cCHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999 88 889999888754
No 202
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=24.19 E-value=1.9e+02 Score=20.40 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=16.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|..|+++ .. +.+|.+++++...
T Consensus 159 ~G~vG~~~~q~a~~~Ga~vi~~~~~ 183 (328)
T 1xa0_A 159 TGGVGSLAVSMLAKRGYTVEASTGK 183 (328)
T ss_dssp TSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 47778777 55 8899987666654
No 203
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=24.15 E-value=72 Score=24.89 Aligned_cols=21 Identities=5% Similarity=0.028 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|.+++|+=
T Consensus 134 aG~aGl~aA~~la~~G~~V~vlE 156 (571)
T 1y0p_A 134 SGGAGFSAAISATDSGAKVILIE 156 (571)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCcEEEEe
Confidence 99999999 87 88999988873
No 204
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=24.08 E-value=1.8e+02 Score=20.36 Aligned_cols=20 Identities=15% Similarity=0.006 Sum_probs=15.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|..|.++ .+ +..|.+++++
T Consensus 127 aGg~g~a~a~~L~~~G~~V~v~ 148 (271)
T 1nyt_A 127 AGGASRGVLLPLLSLDCAVTIT 148 (271)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcHHHHHHHHHHHHcCCEEEEE
Confidence 78888888 88 8899655544
No 205
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.03 E-value=88 Score=23.44 Aligned_cols=23 Identities=4% Similarity=0.062 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ .. +..|.++++|=.+
T Consensus 14 aG~aGl~aA~~l~~~g~~V~liE~~ 38 (470)
T 1dxl_A 14 GGPGGYVAAIKAAQLGFKTTCIEKR 38 (470)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999999 77 8889999888655
No 206
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=24.02 E-value=70 Score=24.14 Aligned_cols=23 Identities=13% Similarity=0.093 Sum_probs=19.3
Q ss_pred cchHHHHHHHHHcCCcEEEEecC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~ 94 (108)
.|.+.+|+.|+.+|+|+.|+.|.
T Consensus 248 iGT~~lAl~Ak~~~vPfyV~ap~ 270 (347)
T 1t9k_A 248 IGTYSLAVLAKRNNIPFYVAAPV 270 (347)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCG
T ss_pred ccHHHHHHHHHHcCCCEEEeccc
Confidence 78888887668889999999875
No 207
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=24.01 E-value=75 Score=24.01 Aligned_cols=23 Identities=4% Similarity=0.028 Sum_probs=19.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|+++ +. +..|++++|+=..
T Consensus 35 gG~AGl~aA~~La~~G~~V~llEk~ 59 (417)
T 3v76_A 35 AGAAGMMCAIEAGKRGRRVLVIDHA 59 (417)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 99999999 88 9999998888433
No 208
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=23.98 E-value=1e+02 Score=23.72 Aligned_cols=30 Identities=10% Similarity=0.078 Sum_probs=23.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.|+.|.++ .. +..|++++++- .+++|++.+
T Consensus 10 ~G~vG~~lA~~La~~G~~V~~~D---~~~~~v~~l 41 (450)
T 3gg2_A 10 IGYVGLVSATCFAELGANVRCID---TDRNKIEQL 41 (450)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHH
T ss_pred cCHHHHHHHHHHHhcCCEEEEEE---CCHHHHHHH
Confidence 99999999 87 99999888774 456665544
No 209
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=23.89 E-value=78 Score=21.85 Aligned_cols=22 Identities=9% Similarity=-0.038 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHcCC-cEEEEec
Q 033926 72 NGNSPILK-LI-NHKNY-AMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~-~~~ivvp 93 (108)
+|-.|+++ .. +..|+ +++++=+
T Consensus 9 ~G~aGl~aA~~l~~~g~~~v~lie~ 33 (311)
T 2q0l_A 9 GGPAGLSAGLYATRGGVKNAVLFEK 33 (311)
T ss_dssp CSHHHHHHHHHHHHTTCSSEEEECS
T ss_pred ccHHHHHHHHHHHHCCCCcEEEEcC
Confidence 99999999 77 88999 9888754
No 210
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=23.81 E-value=75 Score=21.88 Aligned_cols=21 Identities=5% Similarity=-0.224 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
.|+.|.++ .. +..|++++++-
T Consensus 27 ~G~mG~alA~~L~~~G~~V~~~~ 49 (245)
T 3dtt_A 27 TGTVGRTMAGALADLGHEVTIGT 49 (245)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEe
Confidence 99999999 77 88999888774
No 211
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=23.71 E-value=59 Score=22.54 Aligned_cols=21 Identities=10% Similarity=0.042 Sum_probs=18.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|+++ .. +..|++++++=
T Consensus 13 ~G~aGl~aA~~l~~~g~~v~lie 35 (320)
T 1trb_A 13 SGPAGYTAAVYAARANLQPVLIT 35 (320)
T ss_dssp CSHHHHHHHHHHHTTTCCCEEEC
T ss_pred cCHHHHHHHHHHHHCCCcEEEEc
Confidence 99999999 77 88899988774
No 212
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=23.64 E-value=1.8e+02 Score=21.00 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=23.7
Q ss_pred HcCCCCCCeEe----cchHHHHH-HH-HHcCC-cEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF----NGNSPILK-LI-NHKNY-AMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v----sGN~g~al-~~-~~~G~-~~~ivvp~~~~~~k~~~~ 104 (108)
+...+++|..+ +|..|++. .. +.+|. +++++. .+++|.+.+
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a 212 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTD---LSATRLSKA 212 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHH
Confidence 33345666654 66667766 55 78898 444443 245665554
No 213
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=23.63 E-value=71 Score=24.52 Aligned_cols=23 Identities=4% Similarity=-0.107 Sum_probs=19.6
Q ss_pred cchHHHHHHHHHcCCcEEEEecC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~ 94 (108)
.|.+.+|+.|+.+|+|+.|+.|.
T Consensus 277 iGTy~lAl~Ak~~~vPfyV~ap~ 299 (383)
T 2a0u_A 277 IGTYNLAVSAKFHGVKLYVAAPT 299 (383)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCG
T ss_pred ccHHHHHHHHHHcCCCEEEeCCc
Confidence 78888887678899999999885
No 214
>3l8u_A SMU.1707C, putative rRNA methylase; methyltransferase, knotted protein; 2.00A {Streptococcus mutans} SCOP: c.116.1.0
Probab=23.48 E-value=66 Score=21.78 Aligned_cols=26 Identities=8% Similarity=0.047 Sum_probs=21.6
Q ss_pred cchHHHHH-HHHHcCCcEEEEecCCCC
Q 033926 72 NGNSPILK-LINHKNYAMNSVFLFSVN 97 (108)
Q Consensus 72 sGN~g~al-~~~~~G~~~~ivvp~~~~ 97 (108)
.||.|.-+ .+..+|++.+++-|...+
T Consensus 28 P~NlGaI~Rta~afG~~~viv~~~~~~ 54 (182)
T 3l8u_A 28 PANTGNIARTCAATNTSLHIIRPMGFP 54 (182)
T ss_dssp HHHHHHHHHHHHHHTCEEEEESCCSSC
T ss_pred cCcHHHHHHHHHHcCCcEEEECCCCCC
Confidence 99999888 778899998888776544
No 215
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=23.38 E-value=72 Score=24.38 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=19.9
Q ss_pred cchHHHHHHHHHcCCcEEEEecCC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~~ 95 (108)
.|.+.+|+.|+.+|+|+.|+.|..
T Consensus 273 iGTy~lAl~Ak~~~vPfyV~ap~~ 296 (374)
T 2yvk_A 273 IGTYGLAILANAFDIPFFVAAPLS 296 (374)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCGG
T ss_pred ccHHHHHHHHHHcCCCEEEecccc
Confidence 788888877788899999998753
No 216
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=23.38 E-value=83 Score=19.52 Aligned_cols=20 Identities=15% Similarity=0.071 Sum_probs=15.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|+.|.++ .. +..|++++++
T Consensus 29 ~G~iG~~~a~~l~~~g~~v~v~ 50 (144)
T 3oj0_A 29 NGMLASEIAPYFSYPQYKVTVA 50 (144)
T ss_dssp CSHHHHHHGGGCCTTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCCEEEEE
Confidence 99999999 77 7789984433
No 217
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=23.35 E-value=75 Score=23.66 Aligned_cols=20 Identities=10% Similarity=-0.024 Sum_probs=18.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 24 ~G~~Gl~aa~~l~~~g~~v~v~ 45 (478)
T 2ivd_A 24 GGISGLAVAHHLRSRGTDAVLL 45 (478)
T ss_dssp CBHHHHHHHHHHHTTTCCEEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEE
Confidence 99999999 88 8899998876
No 218
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=23.22 E-value=42 Score=25.01 Aligned_cols=24 Identities=4% Similarity=-0.171 Sum_probs=22.1
Q ss_pred chHHHHH-HH-HHc-CCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHK-NYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~-G~~~~ivvp~~~ 96 (108)
||.+.|+ .+ +.+ |++++++.|+..
T Consensus 166 ~rva~Sl~~~~~~~~g~~v~~~~P~~~ 192 (310)
T 3csu_A 166 GRTVHSLTQALAKFDGNRFYFIAPDAL 192 (310)
T ss_dssp CHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CchHHHHHHHHHhCCCCEEEEECCccc
Confidence 7999999 88 999 999999999975
No 219
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=23.18 E-value=1.9e+02 Score=20.72 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=21.9
Q ss_pred CCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 65 ITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 65 ~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+++|..+ .|..|+++ .. +..|.+++++. .+++|++.+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~ 204 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVD---IGDEKLELA 204 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEEC---SCHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHH
Confidence 5555543 55577777 55 88898655443 245665544
No 220
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=23.16 E-value=1.2e+02 Score=22.69 Aligned_cols=24 Identities=4% Similarity=-0.128 Sum_probs=22.1
Q ss_pred chHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
+|.+.|+ .+ +.+|++++++-|+..
T Consensus 178 ~rva~Sl~~~~~~~G~~v~~~~P~~~ 203 (325)
T 1vlv_A 178 NNVATSLMIACAKMGMNFVACGPEEL 203 (325)
T ss_dssp SHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred cCcHHHHHHHHHHCCCEEEEECCccc
Confidence 6999999 88 999999999999974
No 221
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=23.15 E-value=70 Score=23.94 Aligned_cols=20 Identities=15% Similarity=0.021 Sum_probs=17.0
Q ss_pred cchHHHHH-HH-HH-cCCcEEEE
Q 033926 72 NGNSPILK-LI-NH-KNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~-~G~~~~iv 91 (108)
+|-+|++. +. +. .|++++|+
T Consensus 18 aGisGLsaA~~L~k~~G~~V~Vl 40 (513)
T 4gde_A 18 AGPTGLGAAKRLNQIDGPSWMIV 40 (513)
T ss_dssp CSHHHHHHHHHHHHHCCSCEEEE
T ss_pred CcHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999 77 65 59999887
No 222
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=23.03 E-value=1e+02 Score=22.76 Aligned_cols=24 Identities=4% Similarity=-0.245 Sum_probs=22.2
Q ss_pred chHHHHH-HH-HHc-CCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHK-NYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~-G~~~~ivvp~~~ 96 (108)
+|.+.|+ .+ +.+ |++++++.|+..
T Consensus 161 ~rva~Sl~~~~~~~~g~~v~~~~P~~~ 187 (299)
T 1pg5_A 161 ARTVNSLLRILTRFRPKLVYLISPQLL 187 (299)
T ss_dssp CHHHHHHHHHGGGSCCSEEEEECCGGG
T ss_pred CchHHHHHHHHHhCCCCEEEEECCchh
Confidence 7999999 88 999 999999999975
No 223
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=23.00 E-value=53 Score=24.39 Aligned_cols=22 Identities=9% Similarity=-0.139 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHcC-CcEEEEec
Q 033926 72 NGNSPILK-LI-NHKN-YAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G-~~~~ivvp 93 (108)
+|-.|.++ +. +..| .+++|+=.
T Consensus 31 gGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 31 AGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 99999999 88 8899 88887754
No 224
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=22.95 E-value=2.2e+02 Score=20.54 Aligned_cols=41 Identities=7% Similarity=-0.082 Sum_probs=24.0
Q ss_pred HcCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 61 DKGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
+.+.+++|..+ +|..|.++ .. +..|.+++++.. +++|.+.+
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~ 203 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMA 203 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHH
Confidence 44556666654 45666666 55 778987655442 45555443
No 225
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=22.75 E-value=74 Score=21.96 Aligned_cols=22 Identities=9% Similarity=-0.002 Sum_probs=19.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|+++ .. +..|++++++-+
T Consensus 9 ~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 9 SGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cCHHHHHHHHHHHHCCCcEEEEeC
Confidence 99999999 77 889999998843
No 226
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=22.58 E-value=80 Score=23.30 Aligned_cols=20 Identities=10% Similarity=0.177 Sum_probs=17.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 13 ~G~~Gl~aA~~l~~~g~~v~v~ 34 (453)
T 2yg5_A 13 AGPSGLAAATALRKAGLSVAVI 34 (453)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHCCCcEEEE
Confidence 99999999 88 8889998776
No 227
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=22.53 E-value=67 Score=25.24 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.++ +. +..|++++++=-
T Consensus 26 gGi~Gl~~A~~La~~G~~V~LlEk 49 (561)
T 3da1_A 26 GGITGAGIALDAQVRGIQTGLVEM 49 (561)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCHHHHHHHHHHHhCCCcEEEEEC
Confidence 99999999 88 999999988844
No 228
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=22.50 E-value=96 Score=22.63 Aligned_cols=21 Identities=5% Similarity=0.069 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcC-CcEEEEe
Q 033926 72 NGNSPILK-LI-NHKN-YAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G-~~~~ivv 92 (108)
+|-.|++. +. +..| .+++|+=
T Consensus 14 aG~aGl~aA~~L~~~g~~~v~v~E 37 (424)
T 2b9w_A 14 AGPAGLAAGMYLEQAGFHDYTILE 37 (424)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEEC
T ss_pred cCHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999999 88 8899 8988873
No 229
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=22.39 E-value=33 Score=25.52 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=27.8
Q ss_pred HHcCCCCCCeEe----c---chHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 60 EDKGLITPGKVF----N---GNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 60 ~~~g~~~~g~~v----s---GN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
+..|.++ |..+ - ||.+.|+ .+ +.+|++++++.|+..
T Consensus 148 e~~g~l~-gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 192 (308)
T 1ml4_A 148 KEFGRID-GLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELL 192 (308)
T ss_dssp HHSSCSS-SEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGG
T ss_pred HHhCCCC-CeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccc
Confidence 3456553 4544 2 6999999 88 999999999999975
No 230
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=22.38 E-value=80 Score=24.02 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|++++|+=
T Consensus 12 aG~aGL~aA~~L~~~G~~V~vlE 34 (520)
T 1s3e_A 12 GGISGMAAAKLLHDSGLNVVVLE 34 (520)
T ss_dssp CBHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 88999988873
No 231
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=22.35 E-value=85 Score=22.22 Aligned_cols=23 Identities=9% Similarity=-0.130 Sum_probs=19.5
Q ss_pred cchHHHHH-HH-HHcCC-cEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNY-AMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~-~~~ivvp~ 94 (108)
+|-.|+++ .. +..|. ++++|=+.
T Consensus 12 aG~aGl~aA~~l~~~g~~~v~lie~~ 37 (369)
T 3d1c_A 12 AGAAGIGMAITLKDFGITDVIILEKG 37 (369)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred cCHHHHHHHHHHHHcCCCcEEEEecC
Confidence 99999999 88 88999 88887554
No 232
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=22.25 E-value=2e+02 Score=20.62 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=23.7
Q ss_pred cCCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhcc
Q 033926 62 KGLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 62 ~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~~ 105 (108)
...+++|..+ +|..|++. -. +.+|.++ +.+. .+++|.+.++
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~V-i~~~--~~~~~~~~~~ 209 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFV-VCTA--RSPRRLEVAK 209 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEE-EEEE--SCHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEE-EEEc--CCHHHHHHHH
Confidence 3345666654 66666666 45 7889884 3332 3566665543
No 233
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=22.22 E-value=53 Score=24.64 Aligned_cols=23 Identities=9% Similarity=-0.109 Sum_probs=19.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.++ +. +..|++++|+=..
T Consensus 14 aG~aGl~aA~~La~~G~~V~vlE~~ 38 (453)
T 3atr_A 14 GGFAGSSAAYQLSRRGLKILLVDSK 38 (453)
T ss_dssp CSHHHHHHHHHHSSSSCCEEEECSS
T ss_pred cCHHHHHHHHHHHHCCCCEEEEECC
Confidence 99999999 88 8899998888543
No 234
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=22.21 E-value=2.1e+02 Score=20.23 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=24.4
Q ss_pred cCCCCCCeEe-----cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 62 KGLITPGKVF-----NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 62 ~g~~~~g~~v-----sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.+.+++|..+ +|..|.++ .. +..|.+++++.. ++++.+.+
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~ 186 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETA 186 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHH
Confidence 4556666654 46777777 55 888987655543 34555443
No 235
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=22.19 E-value=1.3e+02 Score=23.25 Aligned_cols=46 Identities=7% Similarity=0.040 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHH-cCCCCCCeE--e--cchHHHHH-HH-HHcCCcEEEEecCC
Q 033926 50 RIAYSMIKDAED-KGLITPGKV--F--NGNSPILK-LI-NHKNYAMNSVFLFS 95 (108)
Q Consensus 50 R~a~~~l~~a~~-~g~~~~g~~--v--sGN~g~al-~~-~~~G~~~~ivvp~~ 95 (108)
||++..++.+.+ .|..-.|.+ | .||-|..+ -. ..+|.+++.+.+.+
T Consensus 193 ~Gv~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 193 FGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred HHHHHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 577777776554 443212333 3 99999999 77 88998888666554
No 236
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=22.15 E-value=72 Score=23.99 Aligned_cols=21 Identities=5% Similarity=0.033 Sum_probs=18.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|++++|+=
T Consensus 41 aG~~Gl~aA~~l~~~g~~v~vlE 63 (498)
T 2iid_A 41 AGMAGLSAAYVLAGAGHQVTVLE 63 (498)
T ss_dssp CBHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCHHHHHHHHHHHhCCCeEEEEE
Confidence 99999999 88 88999988874
No 237
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=21.98 E-value=1.2e+02 Score=22.51 Aligned_cols=30 Identities=13% Similarity=-0.105 Sum_probs=23.0
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
.|+.|.++ .. +..|++++++- .++++.+.+
T Consensus 30 lG~mG~~~A~~L~~~G~~V~v~d---r~~~~~~~l 61 (358)
T 4e21_A 30 LGRMGADMVRRLRKGGHECVVYD---LNVNAVQAL 61 (358)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHH
T ss_pred chHHHHHHHHHHHhCCCEEEEEe---CCHHHHHHH
Confidence 99999999 88 99999888773 345555543
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=21.93 E-value=82 Score=23.90 Aligned_cols=23 Identities=9% Similarity=-0.034 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|++. .. +..|.++++|=..
T Consensus 33 gG~aGl~aA~~la~~G~~V~liEk~ 57 (491)
T 3urh_A 33 SGPGGYVCAIKAAQLGMKVAVVEKR 57 (491)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999999 77 8999999888643
No 239
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=21.83 E-value=85 Score=23.58 Aligned_cols=21 Identities=5% Similarity=-0.083 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEe
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivv 92 (108)
+|-.|++. +. +..|++++|+=
T Consensus 47 aG~aGl~aA~~l~~~g~~v~v~E 69 (495)
T 2vvm_A 47 GGYCGLTATRDLTVAGFKTLLLE 69 (495)
T ss_dssp CBHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcHHHHHHHHHHHHCCCCEEEEe
Confidence 99999999 88 88999988873
No 240
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=21.82 E-value=89 Score=20.99 Aligned_cols=22 Identities=9% Similarity=-0.200 Sum_probs=18.9
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
.|+.|.++ .. +..|.+++++-.
T Consensus 27 ~G~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 27 KGNMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcC
Confidence 99999999 88 889998887743
No 241
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=21.79 E-value=59 Score=24.42 Aligned_cols=25 Identities=12% Similarity=-0.036 Sum_probs=22.6
Q ss_pred chHHHHH-HH-HHcCCcEEEEecCCCC
Q 033926 73 GNSPILK-LI-NHKNYAMNSVFLFSVN 97 (108)
Q Consensus 73 GN~g~al-~~-~~~G~~~~ivvp~~~~ 97 (108)
+|.+.|+ .+ +.+|++++++-|+...
T Consensus 182 ~rva~Sl~~~~~~~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 182 QAVPNSFAEWMNATDYEFVITHPEGYE 208 (324)
T ss_dssp SHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred cchHHHHHHHHHHCCCEEEEeCCcccC
Confidence 6999999 88 9999999999999753
No 242
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=21.74 E-value=82 Score=23.70 Aligned_cols=23 Identities=4% Similarity=0.054 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|++. .. +..|.++++|=..
T Consensus 11 gG~aGl~aA~~la~~G~~V~liEk~ 35 (476)
T 3lad_A 11 AGPGGYVAAIKSAQLGLKTALIEKY 35 (476)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 99999999 77 8899999888654
No 243
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=21.50 E-value=79 Score=22.13 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHc-CCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHK-NYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~-G~~~~ivvp~ 94 (108)
+|-.|+++ +. +.. |++++|+=..
T Consensus 47 gG~aGl~aA~~la~~~G~~V~viEk~ 72 (284)
T 1rp0_A 47 AGSAGLSAAYEISKNPNVQVAIIEQS 72 (284)
T ss_dssp CSHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred ccHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99999999 77 887 9999988544
No 244
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=21.46 E-value=2.3e+02 Score=20.37 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=19.8
Q ss_pred CCCCCCeEe----cchHHHHH-HH-HHcCCcEEEEec
Q 033926 63 GLITPGKVF----NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 63 g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
..+++|..+ .|..|+.+ .. +.+|.+++++..
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~ 211 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 211 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 446666654 56667666 55 788998655553
No 245
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=21.39 E-value=71 Score=24.03 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=18.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. +. +..|++++|+
T Consensus 21 ~G~~Gl~aA~~l~~~g~~v~v~ 42 (504)
T 1sez_A 21 AGVSGLAAAYKLKIHGLNVTVF 42 (504)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEE
T ss_pred CCHHHHHHHHHHHHCCCcEEEE
Confidence 99999999 88 8899998877
No 246
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=21.32 E-value=82 Score=23.34 Aligned_cols=21 Identities=5% Similarity=-0.154 Sum_probs=18.0
Q ss_pred cchHHHHH-HH-HHc-CCcEEEEe
Q 033926 72 NGNSPILK-LI-NHK-NYAMNSVF 92 (108)
Q Consensus 72 sGN~g~al-~~-~~~-G~~~~ivv 92 (108)
+|-+|++. +. +.. |.+++|+=
T Consensus 15 aG~~Gl~aA~~L~~~~g~~v~v~E 38 (399)
T 1v0j_A 15 SGFFGLTIAERVATQLDKRVLVLE 38 (399)
T ss_dssp CSHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEe
Confidence 99999999 77 777 99988873
No 247
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=21.08 E-value=1.7e+02 Score=22.13 Aligned_cols=25 Identities=4% Similarity=-0.154 Sum_probs=22.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.-|.+.|+ .+ +.+|++++++.|+..
T Consensus 197 ~~nva~Sl~~~l~~lG~~v~~~~P~~~ 223 (353)
T 3sds_A 197 ANNVLFDLAIAATKMGVNVAVATPRGY 223 (353)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CchHHHHHHHHHHHcCCEEEEECCccc
Confidence 55888999 88 999999999999985
No 248
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=20.97 E-value=1.1e+02 Score=18.60 Aligned_cols=29 Identities=3% Similarity=-0.159 Sum_probs=21.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~ 103 (108)
.|..|.++ -. ...|++++++-. ++++.+.
T Consensus 14 ~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~ 44 (141)
T 3llv_A 14 SEAAGVGLVRELTAAGKKVLAVDK---SKEKIEL 44 (141)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES---CHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHH
Confidence 89999999 77 888999887753 4555443
No 249
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=20.90 E-value=93 Score=21.37 Aligned_cols=23 Identities=9% Similarity=-0.058 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
.|+.|.++ .. +..|.+++++..+
T Consensus 8 ~G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 8 CGALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 89999999 88 8899988887543
No 250
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=20.78 E-value=81 Score=24.51 Aligned_cols=24 Identities=4% Similarity=-0.021 Sum_probs=20.0
Q ss_pred cchHHHHH-HH-HH---cCCcEEEEecCC
Q 033926 72 NGNSPILK-LI-NH---KNYAMNSVFLFS 95 (108)
Q Consensus 72 sGN~g~al-~~-~~---~G~~~~ivvp~~ 95 (108)
+|-.|.++ ++ ++ .|++++|+=.+.
T Consensus 33 gG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 33 GGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 99999999 88 88 899999885443
No 251
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=20.78 E-value=2.5e+02 Score=20.46 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=24.8
Q ss_pred HcCC-CCCCeEe----cchHHHHH-HH-HHcC-CcEEEEecCCCCHHHHhhc
Q 033926 61 DKGL-ITPGKVF----NGNSPILK-LI-NHKN-YAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 61 ~~g~-~~~g~~v----sGN~g~al-~~-~~~G-~~~~ivvp~~~~~~k~~~~ 104 (108)
+... +++|..+ +|..|++. -. +.+| .+++++.. +++|++.+
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~ 236 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLA 236 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHH
Confidence 4444 5666654 67777776 55 7889 46665553 45666554
No 252
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=20.77 E-value=83 Score=19.43 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=34.0
Q ss_pred CCCCcchhhHHHHHHHHHHHHcCCCCCCeEe----cchHHHHH-HH-HHcCCcEE
Q 033926 41 MQPCSSVKDRIAYSMIKDAEDKGLITPGKVF----NGNSPILK-LI-NHKNYAMN 89 (108)
Q Consensus 41 ~nptGS~K~R~a~~~l~~a~~~g~~~~g~~v----sGN~g~al-~~-~~~G~~~~ 89 (108)
.|-|.|++|--|+..|.+...-+.+.-...- --|.-.|+ .| +.+|++-.
T Consensus 25 ~nFs~sw~dG~af~aLih~~~P~lid~~~l~~~~~~~n~~~af~~Ae~~lgi~~l 79 (109)
T 1bkr_A 25 HNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKL 79 (109)
T ss_dssp SSSSGGGTTSHHHHHHHHHHCGGGCCGGGCCTTCHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCcccccccHHHHHHHHHHCcCCCCHHHcCcCCHHHHHHHHHHHHHHHcCCCcc
Confidence 5667899999999988877654333211111 56788888 88 89999744
No 253
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=20.73 E-value=70 Score=23.81 Aligned_cols=23 Identities=9% Similarity=0.047 Sum_probs=19.8
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
||..|.++ -+ ...|..++++--.
T Consensus 64 SGkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 64 SGRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CcHHHHHHHHHHHHCCCEEEEEecC
Confidence 79999999 77 9999999988743
No 254
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=20.72 E-value=1.6e+02 Score=20.59 Aligned_cols=20 Identities=10% Similarity=-0.066 Sum_probs=15.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|..|.++ .+ ...|.+++|+
T Consensus 127 aGg~g~a~a~~L~~~G~~v~v~ 148 (272)
T 1p77_A 127 AGGATKGVLLPLLQAQQNIVLA 148 (272)
T ss_dssp CSHHHHTTHHHHHHTTCEEEEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEE
Confidence 88888888 88 8899655554
No 255
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=20.68 E-value=98 Score=23.10 Aligned_cols=23 Identities=4% Similarity=-0.135 Sum_probs=19.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|.+. +. +..|.+++|+=..
T Consensus 12 gG~aGl~aA~~la~~G~~V~vlEk~ 36 (401)
T 2gqf_A 12 AGAAGLFCAAQLAKLGKSVTVFDNG 36 (401)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcHHHHHHHHHHHhCCCCEEEEeCC
Confidence 99999999 77 8899998877543
No 256
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=20.64 E-value=70 Score=24.38 Aligned_cols=21 Identities=5% Similarity=-0.116 Sum_probs=20.1
Q ss_pred hHHHHH-HH-HHcCCcEEEEecC
Q 033926 74 NSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 74 N~g~al-~~-~~~G~~~~ivvp~ 94 (108)
|.+.|+ .+ +.+|++++++-|+
T Consensus 207 rva~Sl~~~~~~~G~~v~~~~P~ 229 (359)
T 1zq6_A 207 AVANSALTIATRMGMDVTLLCPT 229 (359)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSS
T ss_pred chHHHHHHHHHHcCCEEEEEcCc
Confidence 899999 88 9999999999998
No 257
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.60 E-value=1.3e+02 Score=20.56 Aligned_cols=20 Identities=5% Similarity=-0.065 Sum_probs=17.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
.||.|.++ .. ...|++++++
T Consensus 8 ~G~mG~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 8 FGEVAQTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEC
T ss_pred chHHHHHHHHHHHHCCCeEEEe
Confidence 89999999 77 8889987775
No 258
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=20.59 E-value=91 Score=23.58 Aligned_cols=20 Identities=5% Similarity=-0.016 Sum_probs=18.2
Q ss_pred cchHHHHH-HH-HHcCCcEEEE
Q 033926 72 NGNSPILK-LI-NHKNYAMNSV 91 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~iv 91 (108)
+|-.|++. .. +..|.++++|
T Consensus 17 gG~aGl~aA~~la~~G~~V~li 38 (483)
T 3dgh_A 17 GGSAGLACAKEAVLNGARVACL 38 (483)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEE
Confidence 99999999 77 8899999888
No 259
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=20.59 E-value=81 Score=23.74 Aligned_cols=22 Identities=5% Similarity=-0.059 Sum_probs=19.3
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|++. .. +..|.+++++=.
T Consensus 13 aG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 13 GGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEEES
T ss_pred cCHHHHHHHHHHHhCCCEEEEEeC
Confidence 99999999 77 889999988854
No 260
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=20.55 E-value=2.1e+02 Score=20.62 Aligned_cols=29 Identities=7% Similarity=-0.126 Sum_probs=19.7
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHh
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFN 102 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~ 102 (108)
+|-.|.++ ++ +..|++-+.++..+ ++|.+
T Consensus 130 aGGaaraia~~L~~~G~~~v~v~nRt--~~ka~ 160 (282)
T 3fbt_A 130 SGGAARAVLQYLKDNFAKDIYVVTRN--PEKTS 160 (282)
T ss_dssp SSTTHHHHHHHHHHTTCSEEEEEESC--HHHHH
T ss_pred CcHHHHHHHHHHHHcCCCEEEEEeCC--HHHHH
Confidence 89999999 88 99999444444333 44443
No 261
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=20.53 E-value=92 Score=22.51 Aligned_cols=30 Identities=10% Similarity=0.029 Sum_probs=24.1
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecCCCCHHHHhhc
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~~~~~~k~~~~ 104 (108)
-|+.|.++ .- ...|+++++| +.+++|.+.+
T Consensus 11 lG~MG~~mA~~L~~~G~~v~v~---dr~~~~~~~l 42 (300)
T 3obb_A 11 LGHMGAPMATNLLKAGYLLNVF---DLVQSAVDGL 42 (300)
T ss_dssp CSTTHHHHHHHHHHTTCEEEEE---CSSHHHHHHH
T ss_pred ehHHHHHHHHHHHhCCCeEEEE---cCCHHHHHHH
Confidence 89999999 77 8899999988 4567776654
No 262
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=20.45 E-value=2.4e+02 Score=20.13 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=21.8
Q ss_pred CCCCCCeEe-----cchHHHHH-HH-HHc-CCcEEEEecCCCCHHHHhhc
Q 033926 63 GLITPGKVF-----NGNSPILK-LI-NHK-NYAMNSVFLFSVNVNNFNQA 104 (108)
Q Consensus 63 g~~~~g~~v-----sGN~g~al-~~-~~~-G~~~~ivvp~~~~~~k~~~~ 104 (108)
..+++|..+ +|..|.++ .. +.. |.+++++.. +++|.+.+
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~ 212 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAA 212 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHH
Confidence 446666654 33566666 44 666 987555442 45555543
No 263
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=20.42 E-value=1e+02 Score=20.75 Aligned_cols=30 Identities=7% Similarity=-0.007 Sum_probs=23.6
Q ss_pred CCCCCeEe-----cchHHHHH-HH---HHcCCcEEEEec
Q 033926 64 LITPGKVF-----NGNSPILK-LI---NHKNYAMNSVFL 93 (108)
Q Consensus 64 ~~~~g~~v-----sGN~g~al-~~---~~~G~~~~ivvp 93 (108)
.++++.++ ||+.+..+ +| +..|++++++.+
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 45665543 99988777 65 888999999998
No 264
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.37 E-value=89 Score=24.76 Aligned_cols=22 Identities=9% Similarity=0.052 Sum_probs=18.5
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|++. +. +..|.+++|+=-
T Consensus 15 aG~AGl~AA~~la~~G~~V~vlEK 38 (588)
T 2wdq_A 15 AGGAGMRAALQISQSGQTCALLSK 38 (588)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCHHHHHHHHHHHHCCCcEEEEec
Confidence 99999999 77 888999877753
No 265
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=20.37 E-value=2e+02 Score=20.32 Aligned_cols=34 Identities=15% Similarity=0.013 Sum_probs=23.2
Q ss_pred CCCCCeEe---cchHHHHH-HH-HHcCCcEEEEecCCCC
Q 033926 64 LITPGKVF---NGNSPILK-LI-NHKNYAMNSVFLFSVN 97 (108)
Q Consensus 64 ~~~~g~~v---sGN~g~al-~~-~~~G~~~~ivvp~~~~ 97 (108)
.+++|.++ +|.|...+ -+ +....+.++++|.+..
T Consensus 23 ~V~~g~~IglgsGST~~~~i~~L~~~~~~itv~VtnS~~ 61 (224)
T 3kwm_A 23 SITTEITLGVGTGSTVGFLIEELVNYRDKIKTVVSSSED 61 (224)
T ss_dssp TCCSSEEEEECCSHHHHHHHHHGGGCTTTEEEEEESCHH
T ss_pred hCCCCCEEEECCcHHHHHHHHHHHhhcCceEEEECCcHH
Confidence 45667776 99998777 55 5444467776877643
No 266
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=20.36 E-value=1.9e+02 Score=20.67 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=22.5
Q ss_pred CCCCCeEe----cchHHHHH-HH-HHc-CCcEEEEecCCCCHHHHhhcc
Q 033926 64 LITPGKVF----NGNSPILK-LI-NHK-NYAMNSVFLFSVNVNNFNQAH 105 (108)
Q Consensus 64 ~~~~g~~v----sGN~g~al-~~-~~~-G~~~~ivvp~~~~~~k~~~~~ 105 (108)
.+++|.++ +|..|++. .. +.. |.+++++. .+++|.+.++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~---~~~~~~~~~~ 213 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVD---LDDDRLALAR 213 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEE---SCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHH
Confidence 35556544 67777766 44 566 66655543 3566766553
No 267
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=20.36 E-value=1.4e+02 Score=20.30 Aligned_cols=29 Identities=10% Similarity=0.004 Sum_probs=20.2
Q ss_pred cchHHHHH-HH-HHcC-CcEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKN-YAMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G-~~~~ivvp~~~~~~k~~~ 103 (108)
.|+.|.++ .. ...| .+++++-. ++++.+.
T Consensus 8 ~G~mG~~~a~~l~~~g~~~v~~~~r---~~~~~~~ 39 (263)
T 1yqg_A 8 GGNMAAAVAGGLVKQGGYRIYIANR---GAEKRER 39 (263)
T ss_dssp CSHHHHHHHHHHHHHCSCEEEEECS---SHHHHHH
T ss_pred chHHHHHHHHHHHHCCCCeEEEECC---CHHHHHH
Confidence 89999999 77 8888 77766532 3454443
No 268
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=20.35 E-value=1.6e+02 Score=20.04 Aligned_cols=29 Identities=24% Similarity=0.119 Sum_probs=21.2
Q ss_pred cchHHHHH-HH-HHcCC----cEEEEecCCCCHHHHhh
Q 033926 72 NGNSPILK-LI-NHKNY----AMNSVFLFSVNVNNFNQ 103 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~----~~~ivvp~~~~~~k~~~ 103 (108)
.||.|.++ .. ...|+ +++++-+ ++++.+.
T Consensus 10 ~G~mG~~~a~~l~~~g~~~~~~V~~~~r---~~~~~~~ 44 (247)
T 3gt0_A 10 CGNMGMAMIGGMINKNIVSSNQIICSDL---NTANLKN 44 (247)
T ss_dssp CSHHHHHHHHHHHHTTSSCGGGEEEECS---CHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCCCCeEEEEeC---CHHHHHH
Confidence 99999999 77 88898 7776643 3455443
No 269
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=20.33 E-value=93 Score=23.44 Aligned_cols=23 Identities=9% Similarity=-0.034 Sum_probs=19.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
+|-.|++. .. +..|.++++|=+.
T Consensus 12 gG~aGl~aA~~l~~~G~~V~liEk~ 36 (466)
T 3l8k_A 12 AGGAGYHGAFRLAKAKYNVLMADPK 36 (466)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 99999999 77 8999999888633
No 270
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=20.32 E-value=1.4e+02 Score=22.65 Aligned_cols=24 Identities=8% Similarity=-0.103 Sum_probs=22.1
Q ss_pred chHHHHH-HH-HHcCCcEEEEecCCC
Q 033926 73 GNSPILK-LI-NHKNYAMNSVFLFSV 96 (108)
Q Consensus 73 GN~g~al-~~-~~~G~~~~ivvp~~~ 96 (108)
.|.+.|+ .+ +.+|++++++-|+..
T Consensus 187 ~rva~Sl~~~~~~lG~~v~~~~P~~l 212 (359)
T 2w37_A 187 NNVANSLLVTGAILGVNIHIVAPKAL 212 (359)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred cchHHHHHHHHHHcCCEEEEECCccc
Confidence 6999999 88 999999999999974
No 271
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=20.15 E-value=80 Score=23.87 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=19.0
Q ss_pred cchHHHHHHHHHcCCcEEEEecC
Q 033926 72 NGNSPILKLINHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al~~~~~G~~~~ivvp~ 94 (108)
.|.+.+|+.|+.+|+|+.|+.|.
T Consensus 245 iGT~~lAl~Ak~~~vPfyV~a~~ 267 (351)
T 1t5o_A 245 IGTYTVSVVAKHHNIPFYVAAPK 267 (351)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCG
T ss_pred cCHHHHHHHHHHcCCCEEEeCcc
Confidence 77777776668889999999876
No 272
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=20.03 E-value=99 Score=23.58 Aligned_cols=22 Identities=5% Similarity=0.034 Sum_probs=18.6
Q ss_pred cchHHHHH-HH-HHcCCcEEEEec
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFL 93 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp 93 (108)
+|-.|.+. +. +..|.+++++=.
T Consensus 7 ~G~AGl~aA~~la~~G~~V~viek 30 (472)
T 2e5v_A 7 SGIAGLSAGVALRRAGKKVTLISK 30 (472)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeC
Confidence 99999999 77 889999888743
No 273
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=20.01 E-value=1.7e+02 Score=18.16 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=19.4
Q ss_pred cchHHHHH-HH-HHcCCcEEEEecC
Q 033926 72 NGNSPILK-LI-NHKNYAMNSVFLF 94 (108)
Q Consensus 72 sGN~g~al-~~-~~~G~~~~ivvp~ 94 (108)
.|..|..+ -. ...|++++++-++
T Consensus 11 ~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 11 HSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECC
Confidence 89999999 77 8889999888764
Done!