BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033928
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351722140|ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 98/109 (89%), Gaps = 4/109 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA GGK IKTDKPYG+NGGM
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMA 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LREG+DASGRK KGKGVYQFVDKYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 60 LREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAG 108
>gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLRE 60
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR+
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKIKTDTPYGTGGGMNLRD 59
Query: 61 GLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSP+GDVY G
Sbjct: 60 GLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAG 105
>gi|351722402|ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
gi|255626523|gb|ACU13606.1| unknown [Glycine max]
Length = 138
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/108 (76%), Positives = 96/108 (88%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MA+SVMAS ++LKPAPFTVEKS+ RGLPSL++ +SF++VA G KIKTDKPYG+NGGM L
Sbjct: 1 MASSVMAS-VALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGKKIKTDKPYGINGGMAL 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
R+G DASGRK KGKGVYQFVDKYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 60 RDGTDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAG 107
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
gi|131398|sp|P27202.1|PSBR_ARATH RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|16447|emb|CAA39441.1| photosystem II 10 kDa polypeptide [Arabidopsis thaliana]
gi|3152571|gb|AAC17052.1| Match to photosystem II 10kDa polypeptide gb|X55970. ESTs
gb|Z17693, gb|N37616, gb|T41858, gb|T88021, gb|R37531,
gb|T04679, gb|N37520, gb|N64965, gb|Z17592 and
gb|N65338, gb|N37466 and gb|T45400 come from this gene
[Arabidopsis thaliana]
gi|17979203|gb|AAL49840.1| putative photosystem II polypeptide protein [Arabidopsis thaliana]
gi|20465469|gb|AAM20194.1| putative photosystem II polypeptide [Arabidopsis thaliana]
gi|21536748|gb|AAM61080.1| photosystem II polypeptide, putative [Arabidopsis thaliana]
gi|110740828|dbj|BAE98511.1| PSII-R protein [Arabidopsis thaliana]
gi|332198075|gb|AEE36196.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KG GVY++VDKYGANVDGYSPIYNEN+WS SGDVY G
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKG 109
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118489823|gb|ABK96711.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 94/107 (87%), Gaps = 2/107 (1%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+GLDASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAG 106
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
gi|297333606|gb|EFH64024.1| hypothetical protein ARALYDRAFT_477073 [Arabidopsis lyrata subsp.
lyrata]
Length = 133
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KG GVY++VDKYGANVDGYSPIYNEN+WS SGDVY G
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKG 109
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
gi|118487848|gb|ABK95747.1| unknown [Populus trichocarpa]
gi|222875313|gb|EEF12444.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
Length = 137
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%), Gaps = 2/107 (1%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PFTVEKS+ RGLP+L++ +FKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+GLDASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSP+GDVY G
Sbjct: 60 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAG 106
>gi|449460036|ref|XP_004147752.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449460038|ref|XP_004147753.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449502146|ref|XP_004161556.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Cucumis sativus]
gi|449502150|ref|XP_004161557.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 138
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 97/109 (88%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSF--KIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM +S+SLKPAPFTVEKSA+ GLPSLA+ SF K+VA GGK IKTDKPYG+NG M+
Sbjct: 1 MAASVM-TSVSLKPAPFTVEKSAS-GLPSLARKSFSFKVVASGGKKIKTDKPYGINGSMN 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 59 LRDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYVG 107
>gi|224115372|ref|XP_002317015.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
gi|118488264|gb|ABK95951.1| unknown [Populus trichocarpa]
gi|222860080|gb|EEE97627.1| hypothetical protein POPTRDRAFT_569170 [Populus trichocarpa]
Length = 137
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 93/107 (86%), Gaps = 2/107 (1%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MAASVMAS L+LKP+PFTVEKS+ RGLP+L++ SFKI A G KIKTD PYG GGM+LR
Sbjct: 1 MAASVMAS-LNLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK +GKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 60 NGLDASGRKPRGKGVYQYVDKYGANVDGYSPIYNADEWSPSGDVYAG 106
>gi|224115278|ref|XP_002332205.1| predicted protein [Populus trichocarpa]
gi|222875312|gb|EEF12443.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 94/107 (87%), Gaps = 3/107 (2%)
Query: 3 ASVMASSLSLKPAPFTVEK-SAARGLPSLAK-TSFKIVA-KGGKIKTDKPYGVNGGMDLR 59
+SVMA S+SLKPAPFTV+K S+ RGLP+LA+ +SFK+ A + K TD+PYG+NGGMDLR
Sbjct: 4 SSVMAPSISLKPAPFTVKKPSSVRGLPTLARRSSFKVEASRTRKTNTDQPYGINGGMDLR 63
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
EG+DASGRK KGKGVYQFVDKYGANVDGYSPIYN NDWSPSGDVY G
Sbjct: 64 EGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYNTNDWSPSGDVYVG 110
>gi|146454590|gb|ABQ41961.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 121
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 89/99 (89%), Gaps = 2/99 (2%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
K +GKGVYQFVDKYGANVDGYSPIY+ NDWSPSGDVY G
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVG 99
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|967968|gb|AAA74957.1| photosystem II 10kDa polypeptide [Brassica rapa subsp. campestris]
Length = 141
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DLR+G+DASGRK KG GVY+FVDKYGANVDGYSPIYNE++WS SGDVY G
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKG 110
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
Length = 139
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 97/109 (88%), Gaps = 4/109 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPAPFTVEKSA RGLPSL+++S FK+VA GGK IKTDKPYG+NGGM+
Sbjct: 1 MASSVMAS-VSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L EG+D+SGRK KGKGVYQFVDKYG NVDGYSPIYN DWSPSGDVY G
Sbjct: 60 LVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVG 108
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 94/109 (86%), Gaps = 3/109 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAAS+M SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MD
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+GLDASGRK KG GVY+FVDKYGANVDGYSPIYNE++WS SGDVY G
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKG 109
>gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
Length = 137
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 94/107 (87%), Gaps = 2/107 (1%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MA SVMAS +SLKP+PF+V+KS+ RGLP L++ +FK+ A GGK IKTDKPYG+ GGM+LR
Sbjct: 1 MATSVMAS-VSLKPSPFSVQKSSVRGLPKLSRRAFKVEAGGGKKIKTDKPYGIGGGMNLR 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRKA GKGVYQ+VDKYGANVDGYSPIYN ++WSP+GDVY G
Sbjct: 60 NGLDASGRKATGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAG 106
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
Length = 129
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/98 (79%), Positives = 89/98 (90%), Gaps = 3/98 (3%)
Query: 12 LKPAPFTVEKSAARGLPSL--AKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRK 68
LKPAPFT E+S+ RG+PSL A +SFK+VA GGK IKTDKPYG+NGGM+LR+GLDASGRK
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 69 AKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
KGKGVYQFVDKYGANVDGYSPIY++ DWSP+GDVYTG
Sbjct: 61 GKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTG 98
>gi|146454594|gb|ABQ41963.1| photosystem II 10 kDa polypeptide [Sonneratia ovata]
gi|146454596|gb|ABQ41964.1| photosystem II 10 kDa polypeptide [Sonneratia apetala]
Length = 121
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 89/99 (89%), Gaps = 2/99 (2%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
K +GKGVYQFVDKYGANVDGYSPIY+ NDWSPSGDVY G
Sbjct: 61 KPRGKGVYQFVDKYGANVDGYSPIYDTNDWSPSGDVYVG 99
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DLR+G+DASGRK KG GVY+FVDKYGANVDGYSPIYNE +W+P GD Y G
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKG 110
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
gi|223530550|gb|EEF32429.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis]
Length = 138
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 96/108 (88%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAA-RGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MA+SVMAS +SLKP+PFTV+KS++ RGLP+L++ +F+I A GGK IKTDKPYG+ GGM+L
Sbjct: 1 MASSVMAS-VSLKPSPFTVQKSSSVRGLPTLSRRTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
R G+DASGRK GKGVYQFVDKYGANVDGYSPIYN ++WSP+GDVY G
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAG 107
>gi|146454592|gb|ABQ41962.1| photosystem II 10 kDa polypeptide [Sonneratia caseolaris]
Length = 121
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/99 (80%), Positives = 88/99 (88%), Gaps = 2/99 (2%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGR 67
+SLKPAPFT E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGM+LR+G DASGR
Sbjct: 1 VSLKPAPFTAERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMNLRDGKDASGR 60
Query: 68 KAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
K KGKGVYQFVDKYGANVDGYSPIY+ NDWSP GDVY G
Sbjct: 61 KPKGKGVYQFVDKYGANVDGYSPIYDTNDWSPGGDVYVG 99
>gi|225462227|ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera]
gi|147789486|emb|CAN71762.1| hypothetical protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product [Vitis vinifera]
Length = 139
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 94/109 (86%), Gaps = 4/109 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SSLSLKP+PF+VE+ A RGLPSLA++S F++ A GGK IKTDKPYG+ GGM
Sbjct: 1 MAASVM-SSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMK 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L +GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ ++WSP GDVY G
Sbjct: 60 LSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVG 108
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 93/110 (84%), Gaps = 4/110 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM S ++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DLR+G+DASGRK KG GVY+FVD+YGANVDGYSPIYNE +WS SGDVY G
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKG 110
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Short=PII10; Flags: Precursor
gi|22669|emb|CAA49693.1| NtpII10 [Nicotiana tabacum]
Length = 136
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 93/109 (85%), Gaps = 7/109 (6%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQFVDKYGANVDGYSPIYN +DWSPSGDVY G
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVG 105
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
pekinensis]
Length = 137
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
Query: 4 SVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMDLRE 60
SVM SS++LKPA FTVEK + RGLPSL + +SFKIVA G KIKTDKP+GVNG MDLR+
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 61 GLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK KG GVY+FVDKYGANVDGYSPIYNE++WS SGDVY G
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKG 106
>gi|388503488|gb|AFK39810.1| unknown [Lotus japonicus]
gi|388512023|gb|AFK44073.1| unknown [Lotus japonicus]
Length = 139
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 94/109 (86%), Gaps = 4/109 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MA+SVMAS +SLKPA F++EKS+ RGLPSL+++S F++VA GGK IKTD PYG GGM+
Sbjct: 1 MASSVMAS-VSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR G+DASGRK +GKGVYQ+VDKYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 60 LRNGVDASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAG 108
>gi|33694227|gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
Length = 136
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 89/107 (83%), Gaps = 3/107 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-VSLKPTPFMVEKSSVRGLPNLSR-PFRVVASGVKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK KGKGVYQFVDKYGANVDGYSPIY DWSP+GDVYTG
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTG 105
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 95/109 (87%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+GLDASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 59 LRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 107
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor
gi|21489|emb|CAA28450.1| ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa polypeptide [Solanum tuberosum]
Length = 138
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 95/109 (87%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 107
>gi|112292665|gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
terminalis]
Length = 138
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/109 (76%), Positives = 92/109 (84%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKG-GKIKTDKPYGVNGGMD 57
MA SVM SSLSLK +PF +EKSAARGLPSLA+ +SF++ A G KIKTDKPYG GGM
Sbjct: 1 MATSVM-SSLSLKASPF-LEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMS 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+GLDASGRK KGKGVYQFVDKYGANVDGYSPIY++ DWSPSG VY G
Sbjct: 59 LRDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVG 107
>gi|357451409|ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485029|gb|AES66232.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|388509646|gb|AFK42889.1| unknown [Medicago truncatula]
Length = 136
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+G DASGRK KGKGVYQFVDKYGANVDGYSPIY DWSP+GDVYTG
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTG 105
>gi|350537547|ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum]
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1217642|emb|CAA65231.1| PSII polypeptide [Solanum lycopersicum]
Length = 138
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 107
>gi|148279894|gb|ABQ53998.1| 10 kDa photosystem II polypeptide [Cicer arietinum]
Length = 106
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS LSLKP PFT+EKS+ +GLPS+++ F++VA G KIKTD PYG GGMDL
Sbjct: 1 MASSVMAS-LSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK KGKGVYQFVDKYGANVDGYSPIY DWS +GDVY G
Sbjct: 59 NGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDVYAG 105
>gi|357451411|ref|XP_003595982.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485030|gb|AES66233.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 127
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 88/107 (82%), Gaps = 3/107 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+G DASGRK KGKGVYQFVDKYGANVDGYSPIY DWSP+GDVYTG
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTG 105
>gi|241865170|gb|ACS68663.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
gi|241865402|gb|ACS68733.1| photosystem II 10 kDa polypeptide [Sonneratia alba]
Length = 114
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 80/89 (89%), Gaps = 2/89 (2%)
Query: 20 EKSAARGLPSLAKTS-FKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQF 77
E+SAARGLPSLA+TS K+ A GGK IKTDKPYG+NGGMDLR+G DASGRK +GKGVYQF
Sbjct: 2 ERSAARGLPSLARTSTLKVQASGGKKIKTDKPYGINGGMDLRDGKDASGRKPRGKGVYQF 61
Query: 78 VDKYGANVDGYSPIYNENDWSPSGDVYTG 106
VDKYGANVDGYSPIY+ NDWSPSGDVY G
Sbjct: 62 VDKYGANVDGYSPIYDTNDWSPSGDVYVG 90
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 86/100 (86%), Gaps = 4/100 (4%)
Query: 10 LSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMDLREGLDASG 66
LSLKP FT+EK + +GLPSL ++S FK+VA+G K+KTDKPYG+NG M LR+G+DASG
Sbjct: 1 LSLKPT-FTLEKISVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASG 59
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
RK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 60 RKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 99
>gi|25989650|gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 88/109 (80%), Gaps = 4/109 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS+M SSL+LKPA E+S+ +GLPSL ++S FK+ A GGK IKT PYG GGM+
Sbjct: 1 MAASMM-SSLALKPATPVFERSSVKGLPSLVRSSSSFKVQASGGKKIKTATPYGPGGGMN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ ++WSPSGDVY G
Sbjct: 60 LPAGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVG 108
>gi|224115376|ref|XP_002317016.1| predicted protein [Populus trichocarpa]
gi|118483083|gb|ABK93451.1| unknown [Populus trichocarpa]
gi|222860081|gb|EEE97628.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 86/106 (81%), Gaps = 3/106 (2%)
Query: 2 AASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDLRE 60
+SVMASS+SLKPAPFTV+K + ++SFK+ A + K KTD+PYG+NGGMDLR
Sbjct: 3 TSSVMASSMSLKPAPFTVKKPSLPS--LSRRSSFKVEASRSRKSKTDQPYGINGGMDLRG 60
Query: 61 GLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ DWSPSG+VY G
Sbjct: 61 GLDASGRKGKGKGVYQFVDKYGANVDGYSPIYDPKDWSPSGEVYVG 106
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|170127|gb|AAA34037.1| 10kd polypeptide precursor [Spinacia oleracea]
Length = 140
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 89/110 (80%), Gaps = 5/110 (4%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+D+SGRK GKGVYQFVDKYGANVDGYSPIYNE +W+P+GDVY G
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAG 109
>gi|269930242|gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 88/109 (80%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMD 57
MA+SV+ SSLSLKP+P + +S +GLPSLA+ + + K G KIKTD P+G+ GGM
Sbjct: 1 MASSVI-SSLSLKPSPISA-RSPVKGLPSLARPASGLTVKASGGKKIKTDTPFGIGGGMK 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L++GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ ++WSPSGDVY G
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVG 107
>gi|283101080|gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|339716046|gb|AEJ88270.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 88/109 (80%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
M +SV+ SSLSLKP+P + +S +GLPSLA+ ++ + A GGK IKTD P+G GGM
Sbjct: 1 MTSSVI-SSLSLKPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMK 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L++GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ ++WSPSGDVY G
Sbjct: 59 LKDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVG 107
>gi|242042938|ref|XP_002459340.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
gi|241922717|gb|EER95861.1| hypothetical protein SORBIDRAFT_02g002830 [Sorghum bicolor]
Length = 137
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 82/107 (76%), Gaps = 2/107 (1%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLR 59
MAASVMAS LSLKP+PF PS ++F+++AK K IKT +P+G GG++L+
Sbjct: 1 MAASVMAS-LSLKPSPFLDRSRFTSVQPSARSSTFRVMAKKTKKIKTSQPFGPAGGLNLK 59
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+G+DASGR AKGKGVYQF +KYGANVDGYSPIYN +WSPSGDVY G
Sbjct: 60 DGVDASGRPAKGKGVYQFANKYGANVDGYSPIYNPEEWSPSGDVYVG 106
>gi|283101070|gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
arrhiza]
gi|351066200|gb|AEQ39074.1| putative chloroplast photosystem II 10 kDa protein [Wolffia
arrhiza]
Length = 138
Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 76/97 (78%), Gaps = 4/97 (4%)
Query: 13 KPAPFTVEKSAARGLPSLAKTSFKIVAK---GGKIKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ + + K G KIKTD P+G GGM L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGMKLKDGLDASGRKG 70
Query: 70 KGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
KGKGVYQFVDKYGANVDGYSPIY+ ++WSPSGDVY G
Sbjct: 71 KGKGVYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVG 107
>gi|242078467|ref|XP_002444002.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
gi|241940352|gb|EES13497.1| hypothetical protein SORBIDRAFT_07g005660 [Sorghum bicolor]
Length = 132
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 83/109 (76%), Gaps = 11/109 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVA-KGGKIKTDKPYGVNGGMD 57
MAAS+++SS + P S A+GLPSL + +SF +V G KIKTDKP+G+ GG+
Sbjct: 1 MAASMISSSALVAP------PSRAQGLPSLGRRASSFAVVCGTGKKIKTDKPFGIGGGLT 54
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ + DASGRK KGKGVYQFVDKYGANVDGYSPIYNEN+WSPSG+VY G
Sbjct: 55 VDK--DASGRKVKGKGVYQFVDKYGANVDGYSPIYNENEWSPSGNVYVG 101
>gi|213512148|ref|NP_001134061.1| Photosystem II 10 kDa polypeptide, chloroplast [Salmo salar]
gi|209730436|gb|ACI66087.1| Photosystem II 10 kDa polypeptide, chloroplast precursor [Salmo
salar]
Length = 138
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 82/108 (75%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKPAPFTV-EKSAARGLPSLAKTSFKIVA-KGGKIKTDKPYGVNGGMDL 58
M+ASVMAS L+LKP+P + E+S RG+ A+ S IVA K KI+T +PYG GG+D
Sbjct: 1 MSASVMAS-LALKPSPPPLWERSKIRGVRPSARPSLLIVASKVKKIQTAQPYGPGGGVDF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
++GLDASGR AKGKGVYQF +KYGANVDGYSPIY +WSP GDVY G
Sbjct: 60 KDGLDASGRVAKGKGVYQFANKYGANVDGYSPIYTPEEWSPGGDVYVG 107
>gi|222636434|gb|EEE66566.1| hypothetical protein OsJ_23089 [Oryza sativa Japonica Group]
Length = 139
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG +
Sbjct: 1 MAASVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L++G+DASGR KGKGVYQF KYGANVDGYSPIYN +WSPSGDVYTG
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTG 108
>gi|218199087|gb|EEC81514.1| hypothetical protein OsI_24892 [Oryza sativa Indica Group]
Length = 139
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Query: 1 MAASVMAS-SLSLKPAPFTVEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
MA SVMAS +L P+PF +E++ R + PS + F+++AK K I+T +P+G GG++
Sbjct: 1 MATSVMASCALKPSPSPF-LEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGLN 59
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
L++G+DASGR KGKGVYQF KYGANVDGYSPIYN +WSPSGD+YTG
Sbjct: 60 LKDGVDASGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDLYTG 108
>gi|226502122|ref|NP_001148037.1| photosystem II3 [Zea mays]
gi|195610816|gb|ACG27238.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195615454|gb|ACG29557.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617002|gb|ACG30331.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195617342|gb|ACG30501.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195618136|gb|ACG30898.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|195623906|gb|ACG33783.1| photosystem II 10 kDa polypeptide [Zea mays]
gi|413921085|gb|AFW61017.1| photosystem II polypeptide [Zea mays]
Length = 128
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 81/108 (75%), Gaps = 13/108 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ GG+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGGGLTV 51
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+DA+GRK KGKGVYQFVDKYGANVDGYSPIYNE+DWSP+GDVY G
Sbjct: 52 D--VDANGRKGKGKGVYQFVDKYGANVDGYSPIYNEDDWSPTGDVYVG 97
>gi|357111682|ref|XP_003557641.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Brachypodium distachyon]
Length = 139
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
Query: 1 MAASVMASS-LSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS+ L P+PF + PS SF++++K K ++T +P+G GG++L
Sbjct: 1 MAASVMASTALKPSPSPFIGQPRLRAIQPSARSPSFRVMSKKAKKVQTSQPFGPGGGLEL 60
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
++G+DASGR AKGKGVYQF KYGANVDGYSPIYN +WSPSGD Y G
Sbjct: 61 KDGVDASGRPAKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDFYAG 108
>gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave tequilana]
Length = 144
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGG---KIKTDKPYGVNGGMDLR 59
A+VM+S +PF + A+ LPSLA++S + + KI+T PYG+NGG+ L+
Sbjct: 7 ATVMSSFFVRPSSPFLERSAQAKALPSLARSSSSLRVEASAKKKIQTATPYGINGGLSLK 66
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+G DASGRKAKGKGVYQFVDKYGANVDGYSPIY+ +WSPSGDVY G
Sbjct: 67 DGADASGRKAKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVG 113
>gi|115470575|ref|NP_001058886.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|22831113|dbj|BAC15975.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|50509251|dbj|BAD30534.1| putative photosystem II 10 kD polypeptide [Oryza sativa Japonica
Group]
gi|113610422|dbj|BAF20800.1| Os07g0147500 [Oryza sativa Japonica Group]
gi|215692793|dbj|BAG88237.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199086|gb|EEC81513.1| hypothetical protein OsI_24891 [Oryza sativa Indica Group]
Length = 137
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+EG+DASGR AKGKG+YQF +KYGANVDGYSPIY +WS +GDVY G
Sbjct: 60 KEGVDASGRVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVG 107
>gi|115475227|ref|NP_001061210.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|38636958|dbj|BAD03219.1| putative photosystem II 10K protein [Oryza sativa Japonica Group]
gi|113623179|dbj|BAF23124.1| Os08g0200300 [Oryza sativa Japonica Group]
gi|215740428|dbj|BAG97084.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768077|dbj|BAH00306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 130
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 8/104 (7%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSP---LVAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DASGRK+ GKGVYQFVDKYGANVDGYSPIY+ +WSP+GD Y G
Sbjct: 56 DASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVG 99
>gi|125560490|gb|EAZ05938.1| hypothetical protein OsI_28175 [Oryza sativa Indica Group]
Length = 130
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 78/104 (75%), Gaps = 8/104 (7%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSPL---VAPARAKGLPSISRRGSSFAIVCTGGKKIKTDKPYGIGGGMSVD--I 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DASGRK+ GKGVYQFVDKYGANVDGYSPIY+ +WSP+GD Y G
Sbjct: 56 DASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPTGDTYVG 99
>gi|83317160|gb|ABC02754.1| PS II 10 kDa protein [Phyllostachys edulis]
Length = 130
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 79/104 (75%), Gaps = 8/104 (7%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P + + A+G+PSL++ +SF IV GGK IKTDKPYG+ GGM + +
Sbjct: 1 MATSMITSP---LLAPTRAKGMPSLSRRGSSFAIVCGGGKKIKTDKPYGIGGGMTVD--V 55
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DA+GRK KGKGVYQFVDKYGANVDGYSPIY+ +WSPSGDVY G
Sbjct: 56 DANGRKGKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVG 99
>gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, chloroplast precursor
[Chenopodium rubrum]
Length = 121
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/110 (61%), Positives = 77/110 (70%), Gaps = 24/110 (21%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGM 56
MAASV+ SSLSLKP+ F V+ K+A +GLPSL++ TSF + A GGK IKTDKP
Sbjct: 1 MAASVVMSSLSLKPSSFNVDTKAAVKGLPSLSRSSTSFTVRASGGKKIKTDKP------- 53
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GKGVYQFVDKYGANVDGYSPIYNE +WSPSGDVYTG
Sbjct: 54 -------------SGKGVYQFVDKYGANVDGYSPIYNEEEWSPSGDVYTG 90
>gi|357451413|ref|XP_003595983.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
gi|355485031|gb|AES66234.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
Length = 88
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 73/89 (82%), Gaps = 3/89 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLR 59
MA+SVMAS +SLKP PF VEKS+ RGLP+L++ FK+VA G KIKTD PYG GGM L
Sbjct: 1 MASSVMAS-VSLKPTPFRVEKSSVRGLPALSR-PFKVVASGVKKIKTDTPYGTGGGMALP 58
Query: 60 EGLDASGRKAKGKGVYQFVDKYGANVDGY 88
+G DASGRK KGKGVYQFVDKYGANVDGY
Sbjct: 59 DGKDASGRKQKGKGVYQFVDKYGANVDGY 87
>gi|8698891|gb|AAF78511.1|AF195209_1 polypeptide precursor of photosystem II [Pyrus pyrifolia]
Length = 82
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 71/82 (86%), Gaps = 3/82 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKGGK-IKTDKPYGVNGGMD 57
MAASVM SS+SLKP+PFTV+K A RGLPSL+++S FK+ A GGK I+T PYG+NGGMD
Sbjct: 1 MAASVMTSSVSLKPSPFTVDKPAVRGLPSLSRSSASFKVQASGGKKIRTATPYGINGGMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVD 79
LR+G+DASGRK KGKGVYQFVD
Sbjct: 61 LRDGVDASGRKGKGKGVYQFVD 82
>gi|3914470|sp|Q40070.1|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor
gi|1321868|emb|CAA66373.1| 10kD PSII protein [Hordeum vulgare]
gi|326521128|dbj|BAJ96767.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532058|dbj|BAK01405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+EG+DASGR AKGKGVYQF DKYGANVDGYSPIY +WSPSGDVY G
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVG 107
>gi|195619612|gb|ACG31636.1| photosystem II 10 kDa polypeptide [Zea mays]
Length = 128
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 13/108 (12%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGKIKTDKPYGVNGGMDL 58
MAAS+++SS +L AP +GLP L + +SF +V KIKTDKPYG+ G+ +
Sbjct: 1 MAASMISSS-ALAVAP--------QGLPPLGRRASSFAVVCSKKKIKTDKPYGIGXGLTV 51
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+DA+GRK KGKGVY FVDKYGANVDGYSPIYNE+DWSP+GDVY G
Sbjct: 52 D--VDANGRKGKGKGVYHFVDKYGANVDGYSPIYNEDDWSPTGDVYVG 97
>gi|222636433|gb|EEE66565.1| hypothetical protein OsJ_23088 [Oryza sativa Japonica Group]
Length = 137
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKP-APFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDL 58
MAASVMAS L+LKP A +E+S RG ++A+ S IVAK K I+T +PYG GG+
Sbjct: 1 MAASVMAS-LALKPSASPLLERSKLRGKGTMARPSLIIVAKKAKKIQTSQPYGPAGGVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+EG+DASG AKGKG+YQF +KYGANVDGYSPIY +WS +GDVY G
Sbjct: 60 KEGVDASGMVAKGKGLYQFSNKYGANVDGYSPIYTPEEWSSTGDVYVG 107
>gi|1835731|gb|AAB46718.1| photosystem II 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 126
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 72/91 (79%), Gaps = 5/91 (5%)
Query: 19 VEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVY 75
V + A+GLPS+++ +SF IV GGK IKTDKPYG+ GGM + +DASGRK+ GKGVY
Sbjct: 7 VAPARAKGLPSISRRGSSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVY 64
Query: 76 QFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
QFVDKYGANVDGYSPIY+ +WSP+GD Y G
Sbjct: 65 QFVDKYGANVDGYSPIYSPEEWSPTGDTYVG 95
>gi|34393640|dbj|BAC83336.1| putative Photosystem II 10 kDa polypeptide, chloroplast precursor
[Oryza sativa Japonica Group]
Length = 134
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
Query: 8 SSLSLKPAPFT-VEKSAARGL-PSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDA 64
+S +LKP+P +E++ R + PS + F+++AK K I+T +P+G GG +L++G+DA
Sbjct: 2 ASCALKPSPSPFLEQTRIRAIQPSSRPSLFRVMAKKAKKIQTSQPFGPGGGPNLKDGVDA 61
Query: 65 SGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
SGR KGKGVYQF KYGANVDGYSPIYN +WSPSGDVYTG
Sbjct: 62 SGRPIKGKGVYQFASKYGANVDGYSPIYNPEEWSPSGDVYTG 103
>gi|357111680|ref|XP_003557640.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II 10 kDa polypeptide,
chloroplastic-like [Brachypodium distachyon]
Length = 138
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDL 58
M+ SVMAS L+LKP+ P PS+ F + K K++T +PYG +G +
Sbjct: 1 MSDSVMAS-LALKPSSSPLLERSKLQARXPSVRPPLFIVAKKAKKVQTSQPYGPSGEVVF 59
Query: 59 REGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+EG+DASGR AKGKGVYQF +KYGANVDGYSPIY +WSPSGDVY G
Sbjct: 60 KEGVDASGRVAKGKGVYQFSNKYGANVDGYSPIYTPEEWSPSGDVYVG 107
>gi|302780972|ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
gi|300159727|gb|EFJ26346.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
Length = 135
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKY 81
AARGLP+L+ T + A+GGK I T P G +G + + GLDASGR KGKGVYQF KY
Sbjct: 21 AARGLPALS-TRLTVTARGGKKISTKAPLGPSGDLSFKSGLDASGRGTKGKGVYQFTKKY 79
Query: 82 GANVDGYSPIYNENDWSPSGDVYTG 106
GANVDGYSPIY ++WSPSGDVYTG
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYTG 104
>gi|149391015|gb|ABR25525.1| photosystem ii 10 kDa polypeptide [Oryza sativa Indica Group]
Length = 128
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 61/75 (81%), Gaps = 3/75 (4%)
Query: 33 TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPI 91
+SF IV GGK IKTDKPYG+ GGM + +DASGRK+ GKGVYQFVDKYGANVDGYSPI
Sbjct: 25 SSFAIVCSGGKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVYQFVDKYGANVDGYSPI 82
Query: 92 YNENDWSPSGDVYTG 106
Y+ +WSP+GD Y G
Sbjct: 83 YSPEEWSPTGDTYVG 97
>gi|116778776|gb|ABK20990.1| unknown [Picea sitchensis]
gi|116780441|gb|ABK21682.1| unknown [Picea sitchensis]
gi|116782098|gb|ABK22369.1| unknown [Picea sitchensis]
gi|116784501|gb|ABK23366.1| unknown [Picea sitchensis]
gi|116789036|gb|ABK25094.1| unknown [Picea sitchensis]
gi|116790690|gb|ABK25703.1| unknown [Picea sitchensis]
gi|224285151|gb|ACN40303.1| unknown [Picea sitchensis]
Length = 150
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 76/119 (63%), Gaps = 13/119 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+P G +G + R G+DA GRK KGKGVYQF KYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVDGYSPIYDTKDWSPTGDVYVG 119
>gi|224284194|gb|ACN39833.1| unknown [Picea sitchensis]
Length = 133
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 76/119 (63%), Gaps = 13/119 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSA------ARGLPS------LAKTSFKIVAKGGK-IKTD 47
MA +V + S + ++EKSA +GLPS + S K+VA GGK IK D
Sbjct: 1 MAMAVAGAGCSSVVSSLSLEKSAFTAGTRVKGLPSPLLRPPTSSRSVKVVASGGKKIKVD 60
Query: 48 KPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+P G +G + R G+DA GRK KGKGVYQF KYGANVDGYSPIY+ DWSP+GDVY G
Sbjct: 61 EPLGPSGDLTFRNGVDAGGRKPKGKGVYQFTSKYGANVDGYSPIYDTKDWSPTGDVYVG 119
>gi|302804845|ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
gi|300148023|gb|EFJ14684.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
Length = 135
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 23 AARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKY 81
AARGLP+L+ + A GGK I T P G +G + + G+DASGR AKGKGVYQF KY
Sbjct: 21 AARGLPALS-IRLTVTASGGKKISTKTPLGPSGDLTFKSGVDASGRGAKGKGVYQFTKKY 79
Query: 82 GANVDGYSPIYNENDWSPSGDVYTG 106
GANVDGYSPIY ++WSPSGDVY+G
Sbjct: 80 GANVDGYSPIYTPDEWSPSGDVYSG 104
>gi|222640075|gb|EEE68207.1| hypothetical protein OsJ_26372 [Oryza sativa Japonica Group]
Length = 149
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
Query: 41 GGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPS 100
G KIKTDKPYG+ GGM + +DASGRK+ GKGVYQFVDKYGANVDGYSPIY+ +WSP+
Sbjct: 55 GKKIKTDKPYGIGGGMSVD--IDASGRKSTGKGVYQFVDKYGANVDGYSPIYSPEEWSPT 112
Query: 101 GDVYTG 106
GD Y G
Sbjct: 113 GDTYVG 118
>gi|227204419|dbj|BAH57061.1| AT1G79040 [Arabidopsis thaliana]
Length = 77
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAK 70
LR+G+DASGRK K
Sbjct: 61 LRDGVDASGRKGK 73
>gi|357145089|ref|XP_003573520.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 1 [Brachypodium distachyon]
gi|357145092|ref|XP_003573521.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 2 [Brachypodium distachyon]
gi|357145094|ref|XP_003573522.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
isoform 3 [Brachypodium distachyon]
Length = 127
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 70/109 (64%), Gaps = 16/109 (14%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMD 57
MAAS++ S L A LPSL++ ++F +V GGK IK DKP G+ GG+
Sbjct: 1 MAASMITSPLV-----------APTSLPSLSRRGSNFAVVCSGGKKIKVDKPLGIGGGLT 49
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ +DA+GRK GKGVYQFVDKYGANVDGYSPIY WS SGD Y G
Sbjct: 50 VD--IDANGRKGTGKGVYQFVDKYGANVDGYSPIYTPEVWSESGDRYAG 96
>gi|326495290|dbj|BAJ85741.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510039|dbj|BAJ87236.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 127
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 11/104 (10%)
Query: 6 MASSLSLKPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGL 62
MA+S+ P A LPSL++ +SF +V GGK IK DKP G+ GG+ + +
Sbjct: 1 MAASMITSPI------VAPTSLPSLSRRGSSFAVVCSGGKKIKVDKPLGLGGGLTVD--I 52
Query: 63 DASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DA+GRK KGVYQFVDKYGANVDGYSPIY +WS SGD Y G
Sbjct: 53 DANGRKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSESGDRYAG 96
>gi|155733519|gb|ABU39902.1| photosystem II 10 kDa polypeptide [Olea europaea]
Length = 74
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/49 (85%), Positives = 46/49 (93%)
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+GLDASGRK KGKGVYQ+VDKYGANVDGYSPI+N +DWSPSGDVY G
Sbjct: 1 LRDGLDASGRKGKGKGVYQYVDKYGANVDGYSPIFNTDDWSPSGDVYVG 49
>gi|168019742|ref|XP_001762403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686481|gb|EDQ72870.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 22 SAARGLPSL----AKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQF 77
+A +GLP+L A + A KIK +P G +G ++G+DA GR KGKGVYQF
Sbjct: 28 AAVQGLPALKMNLAARPLTVTASTKKIKVAQPLGPSGDFKSKKGVDAGGRVLKGKGVYQF 87
Query: 78 VDKYGANVDGYSPIYNENDWSPSGDVYTG 106
VDKYGANVDGYSPIY + +WS SGD Y G
Sbjct: 88 VDKYGANVDGYSPIYAKEEWSKSGDSYAG 116
>gi|119720770|gb|ABL97955.1| chloroplast photosystem II 10 kDa polypeptide precursor [Brassica
rapa]
Length = 82
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 46/51 (90%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
MDLR+G+DASGRK KG GVY+FVDKYGANVDGYSPIYNE +WSP GDVY G
Sbjct: 1 MDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKG 51
>gi|183013704|gb|ACC38381.1| photosystem II PsbR protein [Lilium formosanum]
Length = 78
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 44/53 (83%)
Query: 54 GGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GGM L GLDASGRKAKGKGVYQFVDKYGANVDGYSPIY +WS GDVY G
Sbjct: 3 GGMSLENGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYTPEEWSEGGDVYVG 55
>gi|168015305|ref|XP_001760191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688571|gb|EDQ74947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 137
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 12/112 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS------FKIVAKGGKIKTDKPYGVNG 54
MAA+ +S+S ++ GLP+L+ T+ + A KIK +P G +G
Sbjct: 1 MAATTALASVS------AFSGASVLGLPTLSTTTPRTARPLTVTANVKKIKVKEPLGPSG 54
Query: 55 GMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
++G+DA GR KGKGVYQFVDKYGANVDGYSPIY +++WS GD Y G
Sbjct: 55 DFKNKKGVDAGGRVLKGKGVYQFVDKYGANVDGYSPIYAKDEWSKGGDSYAG 106
>gi|168004549|ref|XP_001754974.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694078|gb|EDQ80428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 15 APFTVEKS-----AARGLPSL----AKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDAS 65
AP +E+S A +G+P+L + + A K+K +P G +G ++G+DA
Sbjct: 16 APSAMERSSFSGAAVQGVPALRVSRSARPLSVTASTKKLKVAQPLGPSGDFKNKKGVDAG 75
Query: 66 GRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
GR KGKGVYQFVDKYGANVDGYSPIY +WS GD Y G
Sbjct: 76 GRVLKGKGVYQFVDKYGANVDGYSPIYAREEWSAGGDSYAG 116
>gi|168019568|ref|XP_001762316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686394|gb|EDQ72783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Query: 29 SLAKTSFKIV--AKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVD 86
SL++TS ++ A KIK +P G +G + ++G+DA GR KGKGVYQFVDKYGANVD
Sbjct: 37 SLSRTSRSLIVTASTKKIKVSQPLGPSGDLK-KKGVDAGGRVLKGKGVYQFVDKYGANVD 95
Query: 87 GYSPIYNENDWSPSGDVYTG 106
GYSPIY ++WS GD Y G
Sbjct: 96 GYSPIYARDEWSQGGDSYAG 115
>gi|37783281|gb|AAP72269.1| photosystem II polypeptide [Triticum aestivum]
Length = 99
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 41 GGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPS 100
G KIK DKP G+ GG+ + +DA+GRK KGVYQFVDKYGANVDGYSPIY +WS S
Sbjct: 5 GKKIKVDKPLGLGGGLTVD--IDANGRKVGKKGVYQFVDKYGANVDGYSPIYTPEEWSES 62
Query: 101 GDVYTG 106
GD Y G
Sbjct: 63 GDRYAG 68
>gi|338746114|emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium chlorophorum]
Length = 193
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 7 ASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKT-----------DKPYGVNGG 55
A+S+ +P + R +P+ + KGGK+ T + GV+
Sbjct: 53 ATSMIAEPMQLARQAMPTRAMPNTRQLVIVEGGKGGKVNTGLSSVEDVVVKNNLEGVSRF 112
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYT 105
M+ + +D+ GRK KG GVY+F KYG N+DGYSPIY +DWS +GD ++
Sbjct: 113 MNKKGWVDSQGRKGKGFGVYRFASKYGTNIDGYSPIYRPDDWSETGDTFS 162
>gi|159476978|ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
gi|158282813|gb|EDP08565.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
Length = 121
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYT 105
M+ ++ DASGRK KG GVY++ DKYGANVDGYSPIY + W+ SGD YT
Sbjct: 40 MNKKDWKDASGRKGKGYGVYRYEDKYGANVDGYSPIYTPDLWTESGDSYT 89
>gi|302828496|ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
gi|300268630|gb|EFJ52810.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
nagariensis]
Length = 141
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVY 104
M+ +E D+SGRK KG GVY++ DKYGANVDGYSPIY + W+ SGD Y
Sbjct: 60 MNNKEWKDSSGRKGKGYGVYRYADKYGANVDGYSPIYTPDLWTESGDSY 108
>gi|307107577|gb|EFN55819.1| hypothetical protein CHLNCDRAFT_35273 [Chlorella variabilis]
Length = 144
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 56 MDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVY 104
M+ + +D GRK KG GVY+F +KYGANVDGYSPIY + WS SGD Y
Sbjct: 63 MESKGWVDPQGRKGKGYGVYRFANKYGANVDGYSPIYTPDTWSESGDSY 111
>gi|384254288|gb|EIE27762.1| photosystem II protein PsbR, partial [Coccomyxa subellipsoidea
C-169]
Length = 109
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYT 105
G++ M + D+ GRK KG GVY+F KYGANVDGYSPIY + W+ +GD Y+
Sbjct: 23 GISRKMSDKNWTDSQGRKGKGFGVYRFASKYGANVDGYSPIYTPDVWAETGDSYS 77
>gi|6440817|dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]
Length = 128
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 27 LPSLAKTSFKIVAKGG-KIKTDKPYGVNG---------------GMDLREGLDASGRKAK 70
LP+ + S K VA GG K+ K G+ G M + +D GRK K
Sbjct: 3 LPARVRKSLKPVASGGGKVDITKA-GLEGIDDPTVQQNLKGRSRYMKDKNWVDPQGRKGK 61
Query: 71 GKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVY 104
G GVY+F DKYGANVDGYSPIY + W+ SG Y
Sbjct: 62 GYGVYRFEDKYGANVDGYSPIYTADQWTESGASY 95
>gi|32307614|gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]
Length = 197
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 22 SAARGLPSLAKTSFK-----IVAKGGKIKTDKPY-----GVNGGMDLREGLDASGRKAKG 71
S R PS +FK I KG + +D+ G + M + +D GRK +G
Sbjct: 74 SRTRAAPSRTAVNFKVKQVDIKKKGLESISDETIQQNLQGRSRAMSDKNWVDPQGRKGRG 133
Query: 72 KGVYQFVDKYGANVDGYSPIYNENDWSPSGDVY 104
GVY+F KYGANVDGYSPIY + WS SG+ Y
Sbjct: 134 YGVYRFQKKYGANVDGYSPIYTPDIWSESGNSY 166
>gi|193875820|gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]
Length = 165
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVY 104
G + M+ + +D+ GRK KG GVY+F KYGANVDGYSPIY + W+ SG+ Y
Sbjct: 81 GRSRAMENKGWVDSQGRKGKGLGVYRFEKKYGANVDGYSPIYTPDIWAESGNSY 134
>gi|326500542|dbj|BAK06360.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 83
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 51 GVNGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGY 88
G GG+ +EG+DASGR AKGKGVYQF DKYGANVDGY
Sbjct: 45 GPGGGVAFKEGVDASGRVAKGKGVYQFADKYGANVDGY 82
>gi|324331732|gb|ADY38661.1| putative chloroplast photosystem II protein PsbR [Wolffia
arrhiza]
Length = 79
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
Query: 13 KPAPFTVEKSAARGLPSLAK--TSFKIVAKGGK-IKTDKPYGVNGGMDLREGLDASGRKA 69
KP+P + +S +GLPSLA+ ++ + A GGK IKTD P+G GG +L++GLDASGRK
Sbjct: 12 KPSPISA-RSPVKGLPSLARPASALTVKASGGKKIKTDTPFGTGGGTELKDGLDASGRKG 70
Query: 70 KG 71
KG
Sbjct: 71 KG 72
>gi|87313201|gb|ABD37897.1| photosystem II PsbR protein [Mesostigma viride]
Length = 137
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTSFKIVAKGGKIKTDK---PYGVNG-GM 56
++ASVM SS A + K A S+ K S VA GG K +K P + G +
Sbjct: 6 VSASVMTSSF----AGVKLAKVNAAPRQSVVKASPMTVASGGPKKLNKLKGPAELMGYKL 61
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+ G + K VY+ G NVD YSPIY W+ +GD Y G
Sbjct: 62 STQAGSAPPTKDGKPGKVYKL---SGQNVDEYSPIYTPEQWASNGDTYAG 108
>gi|383163010|gb|AFG64206.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRK 84
>gi|361069671|gb|AEW09147.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRSGVDAGGRK 84
>gi|383162988|gb|AFG64195.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162990|gb|AFG64196.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162992|gb|AFG64197.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162994|gb|AFG64198.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162996|gb|AFG64199.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383162998|gb|AFG64200.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163000|gb|AFG64201.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163002|gb|AFG64202.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163004|gb|AFG64203.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163006|gb|AFG64204.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163008|gb|AFG64205.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163012|gb|AFG64207.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163014|gb|AFG64208.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163016|gb|AFG64209.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163018|gb|AFG64210.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163020|gb|AFG64211.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
gi|383163022|gb|AFG64212.1| Pinus taeda anonymous locus CL4276Contig1_01 genomic sequence
Length = 95
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 28 PSLAKTSFKIVAKG-GKIKTDKPYGVNGGMDLREGLDASGRK 68
P + S K+VA G KIK D+P G +G + R G+DA GRK
Sbjct: 43 PPTSNRSVKVVASGVKKIKVDQPLGPSGDLTFRNGVDAGGRK 84
>gi|8777303|dbj|BAA96893.1| serine carboxypeptidase [Arabidopsis thaliana]
Length = 512
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G +++ N + +GD Y+G++
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQVFSSNPFYVAGDSYSGLV 189
>gi|90020009|ref|YP_525836.1| N-acetylglutamate synthase [Saccharophagus degradans 2-40]
gi|89949609|gb|ABD79624.1| N-acetylglutamate synthase [Saccharophagus degradans 2-40]
Length = 439
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 17 FTVEKSAARGLPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGVYQ 76
FT+E + + GLP+ KI +GG T P GV G+D L R KGV +
Sbjct: 105 FTLEANLSSGLPNSPMHGSKIRIRGGNFITAMPQGVIDGID--HHLTGKVRSVDTKGVRE 162
Query: 77 FVDKYGANVDGYSPIYNENDWSPSGDVY 104
+D+ ++ SP+ N S +G+V+
Sbjct: 163 QLDE--GSITLVSPLGN----SFTGEVF 184
>gi|22327401|ref|NP_198467.2| serine carboxypeptidase-like 1 [Arabidopsis thaliana]
gi|75158705|sp|Q8RWJ6.1|SCP1_ARATH RecName: Full=Serine carboxypeptidase-like 1; Flags: Precursor
gi|20260290|gb|AAM13043.1| serine carboxypeptidase [Arabidopsis thaliana]
gi|22136494|gb|AAM91325.1| serine carboxypeptidase [Arabidopsis thaliana]
gi|332006671|gb|AED94054.1| serine carboxypeptidase-like 1 [Arabidopsis thaliana]
Length = 441
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G +++ N + +GD Y+G++
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQVFSSNPFYVAGDSYSGLV 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,804,062,264
Number of Sequences: 23463169
Number of extensions: 77711275
Number of successful extensions: 129282
Number of sequences better than 100.0: 107
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 129116
Number of HSP's gapped (non-prelim): 107
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)