BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033928
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis
thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSL--AKTSFKIVAKG-GKIKTDKPYGVNGGMD 57
MAASVM SS++LKPA FTVEK+AARGLPSL A+ SFKIVA G KIKTDKP+G+NG MD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KG GVY++VDKYGANVDGYSPIYNEN+WS SGDVY G
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKG 109
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica
campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAK---TSFKIVAKG-GKIKTDKPYGVNGGM 56
MAASVM SS++LKPA FTVEK +ARGLPSL + +SF+IVA G KIKTDKP+GVNG M
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
DLR+G+DASGRK KG GVY+FVDKYGANVDGYSPIYNE++WS SGDVY G
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKG 110
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana
tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 93/109 (85%), Gaps = 7/109 (6%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SLKPAPF+VEK+A +GLPSLA++S F++ A G K+KTDKPYG+NG M
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMS 56
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQFVDKYGANVDGYSPIYN +DWSPSGDVY G
Sbjct: 57 LRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVG 105
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 95/109 (87%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK++ +GLPSLA++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 107
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum
lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPAPFTVEKSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGMD 57
MA++VM SSLSLKP FT+EK + +GLPSL ++S FK+VA G K+KTDKPYG+NG M
Sbjct: 1 MASTVM-SSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+DASGRK KGKGVYQ+VDKYGANVDGYSPIYN ++WSPSGDVY G
Sbjct: 59 LRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVG 107
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia
oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 89/110 (80%), Gaps = 5/110 (4%)
Query: 1 MAASVMASSLSLKPAPFTVE-KSAARGLPSLAKTS--FKIVAKG-GKIKTDKPYGVNGGM 56
MA SVM SSLSLKP+ F V+ KSA +GLPSL+++S F + A G KIK DKP G+ GGM
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 57 DLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
LR+G+D+SGRK GKGVYQFVDKYGANVDGYSPIYNE +W+P+GDVY G
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAG 109
>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare
GN=PSBR PE=3 SV=1
Length = 138
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 80/109 (73%), Gaps = 5/109 (4%)
Query: 1 MAASVMASSLSLKPA--PFTVEKSAARGLPSLAKTSFKIVAKGGK-IKTDKPYGVNGGMD 57
M+A VMAS L+LKP+ P +++S G+ A+ S IVAK K ++T +PYG GG+
Sbjct: 1 MSACVMAS-LALKPSSSPL-LQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVA 58
Query: 58 LREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTG 106
+EG+DASGR AKGKGVYQF DKYGANVDGYSPIY +WSPSGDVY G
Sbjct: 59 FKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVG 107
>sp|Q8RWJ6|SCP1_ARATH Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1
PE=2 SV=1
Length = 441
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G +++ N + +GD Y+G++
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQVFSSNPFYVAGDSYSGLV 189
>sp|Q9CAU3|SCP2_ARATH Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2
PE=2 SV=1
Length = 441
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G ++ N + +GD Y+G++
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQEFSSNPFYVAGDSYSGLV 189
>sp|O81009|SCP12_ARATH Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12
PE=2 SV=1
Length = 435
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
+ L + P ++ G +PSL T++ I D+P G +D
Sbjct: 84 TGLLFENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPS 143
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ + P ++ N + SGD Y+G++
Sbjct: 144 DTGEVKNIHEFLQKWLSK----HPQFSSNPFYASGDSYSGMI 181
>sp|Q9CAU0|SCP6_ARATH Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6
PE=2 SV=2
Length = 452
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P T++ G LPSL T++ I D+P G E +
Sbjct: 92 SGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGV 107
+ K +++F+ K+ G ++ N + GD Y+G+
Sbjct: 152 DTGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSGI 188
>sp|Q9CAU1|SCP3_ARATH Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3
PE=2 SV=1
Length = 441
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + L+
Sbjct: 92 SGLLFENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G ++ N + GD Y+G++
Sbjct: 152 DSGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSGMV 189
>sp|A1AV52|SYL_RUTMC Leucine--tRNA ligase OS=Ruthia magnifica subsp. Calyptogena
magnifica GN=leuS PE=3 SV=1
Length = 816
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 36 KIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-----VDGY 88
K++ G IK D+P+ + GM L++G S K Q ++KYGA+ +
Sbjct: 545 KLLRDEGFIKNDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPAQMIEKYGADTVRLFILFA 604
Query: 89 SPIYNENDWSPSG 101
+P +WS SG
Sbjct: 605 APPTQNLEWSDSG 617
>sp|Q2V465|SCP11_ARATH Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11
PE=2 SV=2
Length = 433
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
+ L + P ++ G +PSL T++ I D+P G +D
Sbjct: 84 TGLLFQNGPLALKSEVYNGSVPSLVSTTYSWTKTANIIFLDQPVGAGFSYSRAPLIDTPT 143
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ + P ++ N + GD Y+G++
Sbjct: 144 DTGEVKRIHEFLQKWLSK----HPQFSSNHFYAGGDSYSGMI 181
>sp|B2SGM9|SYL_FRATM Leucine--tRNA ligase OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=leuS PE=3 SV=1
Length = 813
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|A4IXU1|SYL_FRATW Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q5NG64|SYL_FRATT Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain SCHU S4 / Schu 4) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q14HL6|SYL_FRAT1 Leucine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain FSC 198) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|A0Q693|SYL_FRATN Leucine--tRNA ligase OS=Francisella tularensis subsp. novicida
(strain U112) GN=leuS PE=3 SV=1
Length = 813
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G +K+D+P+ + GM L++G S K + +D+YGA+ V
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDRYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSETG 618
>sp|Q9CAU2|SCP5_ARATH Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5
PE=2 SV=2
Length = 438
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 91 SGLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPS 150
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ + +S N + +GD Y+G++
Sbjct: 151 DSGEAKRIHEFLQKWLSKHQEFS----SNPFYVAGDSYSGMV 188
>sp|Q0BLI7|SYL_FRATO Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain OSU18) GN=leuS PE=3 SV=1
Length = 813
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q2A307|SYL_FRATH Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=leuS PE=3 SV=1
Length = 813
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|A7NCQ3|SYL_FRATF Leucine--tRNA ligase OS=Francisella tularensis subsp. holarctica
(strain FTNF002-00 / FTA) GN=leuS PE=3 SV=1
Length = 813
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN 84
A+ K++ G +K+D+P+ + GM L++G S K + +DKYGA+
Sbjct: 541 ARFFHKLMRDQGLVKSDEPFKNLLTQGMVLKDGAKMSKSKGNIVDPQELIDKYGAD 596
>sp|Q9CAU4|SCP4_ARATH Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4
PE=2 SV=1
Length = 441
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 8 SSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREGLDASG 66
S L + P ++ G LPSL T++ I D+P G + +
Sbjct: 92 SGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPS 151
Query: 67 RKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K +++F+ K+ G ++ N + GD Y+G++
Sbjct: 152 DTGEAKRIHEFLQKW----LGKHQEFSSNPFYVGGDSYSGLV 189
>sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18
PE=2 SV=2
Length = 464
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 3 ASVMASSLSLKPAPFTVEKSAARG-LPSLAKTSFKIVAKGGKIKTDKPYGVNGGMDLREG 61
A S+L+ + P T + G LPSL TS+ I D+P G
Sbjct: 83 ACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPL 142
Query: 62 LDASGRKAKGKGVYQFVDKYGANVDGYSPIYNENDWSPSGDVYTGVL 108
+ K Y+F+ K+ +P + N GD Y G++
Sbjct: 143 SYKPSDTGEAKQTYEFLQKWLVE----NPQFVSNPIYVGGDSYAGIV 185
>sp|Q21MG8|MURC_SACD2 UDP-N-acetylmuramate--L-alanine ligase OS=Saccharophagus
degradans (strain 2-40 / ATCC 43961 / DSM 17024)
GN=murC PE=3 SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 55 GMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNEN 95
G DLRE D + R+ G GV+ F+ + NVDG S + N +
Sbjct: 44 GSDLRES-DVT-RRLAGMGVHVFIGHHATNVDGASVVVNSS 82
>sp|B0U0E8|SYL_FRAP2 Leucine--tRNA ligase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=leuS PE=3 SV=1
Length = 813
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 31 AKTSFKIVAKGGKIKTDKPYG--VNGGMDLREGLDASGRKAKGKGVYQFVDKYGAN-VDG 87
A+ K++ G + +D+P+ + GM L++G S K + +DKYGA+ V
Sbjct: 541 ARFFHKLMRDQGLVTSDEPFKNLLTQGMVLKDGAKMSKSKGNTVDPQELIDKYGADTVRL 600
Query: 88 YS----PIYNENDWSPSG 101
+S P +WS +G
Sbjct: 601 FSMFAAPPEQSLEWSDTG 618
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,142,681
Number of Sequences: 539616
Number of extensions: 1903696
Number of successful extensions: 3236
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3219
Number of HSP's gapped (non-prelim): 34
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)