Query 033929
Match_columns 108
No_of_seqs 219 out of 1025
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:09:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033929.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033929hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r9h_A FKB-6, FK506 binding pr 100.0 8.2E-30 2.8E-34 159.9 11.3 104 2-108 3-108 (135)
2 3o5e_A Peptidyl-prolyl CIS-tra 100.0 1.1E-29 3.9E-34 160.8 11.8 102 4-108 26-129 (144)
3 3b7x_A FK506-binding protein 6 100.0 4.3E-30 1.5E-34 161.0 8.1 104 2-108 17-120 (134)
4 3o5q_A Peptidyl-prolyl CIS-tra 100.0 1.6E-29 5.5E-34 157.2 10.4 101 5-108 11-113 (128)
5 2lkn_A AH receptor-interacting 100.0 8E-30 2.7E-34 164.2 6.4 94 3-97 2-96 (165)
6 2awg_A 38 kDa FK-506 binding p 100.0 3.7E-28 1.2E-32 149.1 13.2 101 2-108 4-104 (118)
7 1yat_A FK506 binding protein; 100.0 2.8E-28 9.4E-33 148.6 11.9 98 8-108 3-100 (113)
8 2y78_A Peptidyl-prolyl CIS-tra 100.0 4.2E-28 1.4E-32 151.7 12.2 99 6-108 23-121 (133)
9 3kz7_A FK506-binding protein 3 100.0 8.2E-28 2.8E-32 147.6 12.5 97 9-108 2-106 (119)
10 2vn1_A 70 kDa peptidylprolyl i 100.0 1E-27 3.5E-32 149.1 12.5 104 4-108 9-113 (129)
11 2lgo_A FKBP; infectious diseas 100.0 7.5E-28 2.6E-32 150.1 10.9 102 4-108 15-118 (130)
12 2ppn_A FK506-binding protein 1 100.0 9.7E-28 3.3E-32 144.8 10.8 94 12-108 1-94 (107)
13 2jwx_A FKBP38NTD, FK506-bindin 99.9 5.1E-27 1.7E-31 150.4 13.4 101 2-108 34-135 (157)
14 4dip_A Peptidyl-prolyl CIS-tra 99.9 5.5E-27 1.9E-31 145.1 12.4 101 6-108 7-109 (125)
15 3uf8_A Ubiquitin-like protein 99.9 3.8E-27 1.3E-31 157.1 12.2 99 6-108 99-197 (209)
16 2d9f_A FK506-binding protein 8 99.9 4E-27 1.4E-31 147.6 10.1 101 2-108 8-109 (135)
17 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.2E-26 4.2E-31 151.6 12.3 98 8-108 46-146 (180)
18 1jvw_A Macrophage infectivity 99.9 2.8E-27 9.4E-32 153.0 8.9 97 7-108 33-129 (167)
19 1q1c_A FK506-binding protein 4 99.9 3.9E-26 1.4E-30 158.0 13.9 103 3-108 41-145 (280)
20 1fd9_A Protein (macrophage inf 99.9 1.4E-26 4.7E-31 154.7 10.6 96 7-108 102-197 (213)
21 1u79_A FKBP-type peptidyl-prol 99.9 5.1E-27 1.8E-31 146.1 7.1 98 7-108 8-116 (129)
22 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.3E-26 7.8E-31 153.9 10.7 93 7-108 113-205 (219)
23 1q6h_A FKBP-type peptidyl-prol 99.9 1.1E-25 3.9E-30 151.2 11.4 94 8-108 118-211 (224)
24 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 2E-25 6.8E-30 162.2 8.4 103 3-108 21-125 (457)
25 2pbc_A FK506-binding protein 2 99.9 4E-24 1.4E-28 127.9 9.6 79 29-108 6-84 (102)
26 3jxv_A 70 kDa peptidyl-prolyl 99.9 9.3E-26 3.2E-30 160.4 0.0 101 5-108 5-105 (356)
27 2if4_A ATFKBP42; FKBP-like, al 99.9 1.4E-23 4.8E-28 147.4 9.3 98 8-108 46-146 (338)
28 3jxv_A 70 kDa peptidyl-prolyl 99.9 5.7E-23 2E-27 146.1 12.4 101 5-108 238-341 (356)
29 1q1c_A FK506-binding protein 4 99.9 1.4E-20 4.7E-25 130.2 12.7 94 6-108 161-260 (280)
30 4dt4_A FKBP-type 16 kDa peptid 99.8 2.5E-20 8.7E-25 120.4 7.6 72 28-100 24-95 (169)
31 3pr9_A FKBP-type peptidyl-prol 99.8 4.2E-20 1.4E-24 118.1 7.8 70 30-101 3-85 (157)
32 2kr7_A FKBP-type peptidyl-prol 99.8 2.5E-19 8.4E-24 114.0 10.5 74 27-101 5-78 (151)
33 1ix5_A FKBP; ppiase, isomerase 99.8 1.3E-19 4.6E-24 115.2 6.1 70 31-101 4-86 (151)
34 1p5q_A FKBP52, FK506-binding p 99.8 2.3E-18 7.7E-23 120.7 12.4 97 3-108 17-117 (336)
35 3prb_A FKBP-type peptidyl-prol 99.8 4.7E-19 1.6E-23 119.3 8.3 70 30-101 3-85 (231)
36 2k8i_A SLYD, peptidyl-prolyl C 99.8 1.1E-18 3.8E-23 113.0 9.0 69 31-101 5-73 (171)
37 2kfw_A FKBP-type peptidyl-prol 99.8 1E-18 3.6E-23 115.2 8.9 69 31-101 5-73 (196)
38 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.9E-17 6.3E-22 106.0 7.9 64 31-101 5-68 (158)
39 1hxv_A Trigger factor; FKBP fo 99.7 1.1E-17 3.7E-22 101.7 6.3 70 28-101 29-98 (113)
40 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.6E-14 1.2E-18 103.0 12.0 94 6-108 141-238 (457)
41 1w26_A Trigger factor, TF; cha 99.5 5.1E-14 1.7E-18 102.3 7.1 71 27-101 156-226 (432)
42 1t11_A Trigger factor, TF; hel 99.3 5.1E-13 1.7E-17 96.1 4.0 70 28-101 160-229 (392)
43 3gty_X Trigger factor, TF; cha 98.3 9E-07 3.1E-11 64.4 5.6 58 28-92 154-211 (433)
44 3htx_A HEN1; HEN1, small RNA m 78.4 5 0.00017 32.0 5.9 61 30-90 562-649 (950)
45 3tb5_A Methionine aminopeptida 67.6 23 0.0008 23.3 7.6 51 27-85 83-142 (264)
46 3fm3_A Methionine aminopeptida 65.6 27 0.00092 24.4 6.8 51 27-85 119-175 (358)
47 1xgs_A Methionine aminopeptida 59.4 38 0.0013 22.9 7.0 51 27-85 71-127 (295)
48 2nw5_A Methionine aminopeptida 57.7 36 0.0012 23.9 6.3 51 27-85 121-177 (360)
49 4fuk_A Methionine aminopeptida 53.4 52 0.0018 22.6 7.8 51 27-85 142-201 (337)
50 3bmb_A Regulator of nucleoside 52.3 15 0.00051 22.1 3.2 24 70-93 91-114 (136)
51 2b3h_A Methionine aminopeptida 52.0 56 0.0019 22.5 7.4 51 27-85 154-213 (329)
52 3mx6_A Methionine aminopeptida 51.5 48 0.0017 21.7 7.4 51 27-85 87-146 (262)
53 2lj4_A Peptidyl-prolyl CIS-tra 50.2 5.6 0.00019 23.3 1.0 22 66-87 79-100 (115)
54 3s6b_A Methionine aminopeptida 49.9 65 0.0022 22.7 6.6 51 27-85 182-244 (368)
55 2f23_A Anti-cleavage anti-GREA 47.6 18 0.0006 22.3 3.0 24 70-93 122-145 (156)
56 3tav_A Methionine aminopeptida 46.4 63 0.0022 21.6 7.4 51 27-85 114-173 (286)
57 2p5d_A UPF0310 protein mjecl36 45.5 17 0.00059 22.2 2.7 18 72-89 30-47 (147)
58 3pka_A Methionine aminopeptida 45.2 66 0.0023 21.5 7.4 51 27-85 120-179 (285)
59 2q8k_A Proliferation-associate 45.1 80 0.0027 22.4 6.8 51 27-85 105-169 (401)
60 2gg2_A Methionine aminopeptida 44.7 63 0.0022 21.1 6.9 51 27-85 85-144 (263)
61 2pv1_A Chaperone SURA; surviVa 44.4 17 0.00057 20.4 2.4 22 66-87 65-86 (103)
62 2pn0_A Prokaryotic transcripti 43.4 15 0.00053 22.2 2.2 24 70-93 94-117 (141)
63 1jns_A Peptidyl-prolyl CIS-tra 41.8 13 0.00046 20.4 1.7 21 67-87 55-75 (92)
64 1o0x_A Methionine aminopeptida 40.6 75 0.0026 20.8 7.6 51 27-85 95-155 (262)
65 2rqs_A Parvulin-like peptidyl- 40.1 19 0.00065 20.0 2.2 23 65-87 60-82 (97)
66 2p4v_A Transcription elongatio 40.0 21 0.00073 22.0 2.6 25 69-93 120-144 (158)
67 3gpk_A PPIC-type peptidyl-prol 39.1 18 0.00063 20.9 2.0 23 65-87 65-87 (112)
68 1b6a_A Methionine aminopeptida 38.9 66 0.0022 23.6 5.3 51 27-85 240-296 (478)
69 1qxy_A Methionyl aminopeptidas 35.2 90 0.0031 20.1 7.6 51 27-85 82-142 (252)
70 1grj_A GREA protein; transcrip 32.9 17 0.00058 22.4 1.2 24 70-93 123-146 (158)
71 4g2p_A Chaperone SURA; structu 32.1 19 0.00065 20.6 1.3 22 66-87 70-91 (110)
72 1dj7_B Ferredoxin thioredoxin 31.2 17 0.00059 19.8 0.9 12 80-91 1-12 (75)
73 3lvj_C Sulfurtransferase TUSA; 30.9 54 0.0018 17.6 3.0 23 72-94 26-48 (82)
74 3q6d_A Proline dipeptidase; st 30.6 1.3E+02 0.0044 20.5 5.6 51 27-85 204-263 (356)
75 2jzv_A Foldase protein PRSA; p 29.8 24 0.00081 20.1 1.5 22 66-87 75-96 (111)
76 3tc5_A Peptidyl-prolyl CIS-tra 29.4 24 0.00083 21.9 1.5 23 64-86 128-150 (166)
77 2vb2_X Copper protein, cation 29.2 32 0.0011 19.0 1.9 27 58-91 47-73 (88)
78 2qcp_X Cation efflux system pr 29.1 33 0.0011 18.6 1.9 27 58-91 39-65 (80)
79 3ui4_A Peptidyl-prolyl CIS-tra 28.5 26 0.00089 19.7 1.5 21 66-86 57-77 (101)
80 1kp0_A Creatine amidinohydrola 28.4 1.5E+02 0.0051 20.5 6.2 51 27-85 237-296 (402)
81 1zk6_A Foldase protein PRSA; a 28.4 21 0.00071 19.5 1.0 22 66-87 56-77 (93)
82 1yw5_A Peptidyl prolyl CIS/tra 28.3 32 0.0011 21.4 2.0 23 65-87 140-162 (177)
83 1je3_A EC005, hypothetical 8.6 27.9 74 0.0025 17.9 3.3 22 72-93 43-64 (97)
84 3i6c_A Peptidyl-prolyl CIS-tra 26.8 23 0.00078 20.9 1.0 21 66-86 87-107 (123)
85 2hd9_A UPF0310 protein PH1033; 26.8 57 0.0019 19.7 2.9 20 74-93 29-48 (145)
86 1jdq_A TM006 protein, hypothet 26.6 69 0.0023 18.0 3.0 23 72-94 42-64 (98)
87 2l55_A SILB,silver efflux prot 26.0 43 0.0015 18.3 2.0 28 58-92 33-60 (82)
88 1j6y_A Peptidyl-prolyl CIS-tra 25.4 28 0.00096 20.9 1.3 24 64-87 101-124 (139)
89 1wn1_A Dipeptidase; prolidase, 25.2 1.7E+02 0.0057 20.1 5.7 51 27-85 204-263 (356)
90 4fln_A Protease DO-like 2, chl 25.2 1.4E+02 0.0048 22.3 5.2 67 9-90 275-341 (539)
91 2zsg_A Aminopeptidase P, putat 24.7 1.7E+02 0.0057 19.9 5.6 51 27-85 207-266 (359)
92 1wy2_A XAA-Pro dipeptidase; st 23.9 1.8E+02 0.0061 19.9 5.6 51 27-85 201-260 (351)
93 1cmx_A Protein (ubiquitin YUH1 23.3 69 0.0023 21.2 2.9 24 27-51 156-179 (235)
94 1xd3_A Ubiquitin carboxyl-term 21.8 68 0.0023 21.1 2.7 24 27-51 159-182 (230)
95 1chm_A Creatine amidinohydrola 21.2 2.1E+02 0.0073 19.8 5.6 52 27-86 237-297 (401)
96 3chb_D Cholera toxin; toxin/re 21.1 1.2E+02 0.0041 16.8 3.3 44 38-81 27-70 (104)
97 2jk8_A BEPA, putative cell fil 21.0 1.8E+02 0.0061 19.7 4.7 17 75-91 285-301 (302)
98 4ege_A Dipeptidase PEPE; struc 20.8 2.2E+02 0.0074 19.8 6.5 52 27-85 223-283 (378)
99 4fkc_A XAA-Pro aminopeptidase; 20.7 2.1E+02 0.0072 19.6 5.7 51 27-85 225-284 (377)
100 1okg_A Possible 3-mercaptopyru 20.1 99 0.0034 21.6 3.4 25 70-94 335-359 (373)
No 1
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.97 E-value=8.2e-30 Score=159.86 Aligned_cols=104 Identities=43% Similarity=0.843 Sum_probs=93.4
Q ss_pred CCceecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcC
Q 033929 2 GDSIDLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRS 79 (108)
Q Consensus 2 ~~~~d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~ 79 (108)
++|+|++ +++||+|+++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+
T Consensus 3 ~~~~dv~~~~~~gl~~~~l~~G~g~~-~~~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~g 79 (135)
T 1r9h_A 3 GEKIDITPKKDGGVLKLIKKEGQGVV-KPTT-GTTVKVHYVGTLE-NGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVAT 79 (135)
T ss_dssp --CEECSTTCCSSEEEEEEECCBSSC-CCCT-TCEEEEEEEEEET-TSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTT
T ss_pred ccceecccCCCCcEEEEEEEccCCCc-CCCC-CCEEEEEEEEEEC-CCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhc
Confidence 4688999 99999999999999852 3544 6999999999996 9999999986568999999999999999999999
Q ss_pred CCCCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 80 MKVGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 80 m~~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
|++|++++|.|||++|||+.+.++.||||
T Consensus 80 m~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~ 108 (135)
T 1r9h_A 80 MTKGEVAEFTIRSDYGYGDAGSPPKIPGG 108 (135)
T ss_dssp CCBTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCCCEEEEEEChHHcCCCCCCCCCcCcC
Confidence 99999999999999999999988889986
No 2
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.97 E-value=1.1e-29 Score=160.77 Aligned_cols=102 Identities=49% Similarity=0.884 Sum_probs=93.7
Q ss_pred ceecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 4 SIDLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 4 ~~d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.+||+ +++||+|+++++|+|.. .|.. ||.|+|||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|+
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~-~p~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEE-TPMI-GDKVYVHYKGKLS-NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMK 102 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSC-CCCT-TCEEEEEEEEECT-TSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred cccccccCCCeEEEEEEECCCCCc-cCCC-CCEEEEEEEEEEC-CCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCC
Confidence 45777 89999999999999852 4655 5999999999997 999999998878899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|++++|.|||++|||+.|.++.||||
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~~~Ipp~ 129 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSLPKIPSN 129 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCEEEEEEChHHCcCCCCCCCCcCCC
Confidence 999999999999999999998889997
No 3
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=160.96 Aligned_cols=104 Identities=34% Similarity=0.595 Sum_probs=87.7
Q ss_pred CCceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 2 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 2 ~~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.++.|+++++||+|+++++|+|.. +. .||.|++||++++.++|++|++++.+++|+.|.+|.+++++||+++|.+|+
T Consensus 17 ~~~~~v~~~~gl~~~vl~~G~g~~--~~-~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~ 93 (134)
T 3b7x_A 17 QRMLDISGDRGVLKDVIREGAGDL--VA-PDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMR 93 (134)
T ss_dssp TTCEESSSSSSEEEEEEECCEEEE--CC-TTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCE
T ss_pred cccceeeCCCCEEEEEEEcCCCCC--CC-CCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCC
Confidence 367899999999999999999853 43 469999999999864699999998777899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|++++|.|||++|||+.+.++.||||
T Consensus 94 ~Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 120 (134)
T 3b7x_A 94 RGELARFLFKPNYAYGTLGCPPLIPPN 120 (134)
T ss_dssp ETCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCEEEEEECHHHCcCCCCCCCCcCcC
Confidence 999999999999999999988889997
No 4
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.96 E-value=1.6e-29 Score=157.21 Aligned_cols=101 Identities=50% Similarity=0.891 Sum_probs=91.9
Q ss_pred eecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCC
Q 033929 5 IDLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKV 82 (108)
Q Consensus 5 ~d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~ 82 (108)
+|++ +++|++|+++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~-~p~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~ 87 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEE-TPMI-GDKVYVHYKGKLS-NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKK 87 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSC-CCCT-TCEEEEEEEEEET-TSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCT
T ss_pred ceecccCCCCEEEEEEECCCCCc-cCCC-CCEEEEEEEEEEC-CCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCC
Confidence 4555 89999999999999853 4655 5999999999997 9999999987678999999999999999999999999
Q ss_pred CcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 83 GEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 83 Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
|++++|.|||++|||+.|.++.||||
T Consensus 88 Ge~~~v~ip~~~aYG~~g~~~~Ip~~ 113 (128)
T 3o5q_A 88 GEICHLLCKPEYAYGSAGSLPKIPSN 113 (128)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCEEEEEEChHHcCCCCCCCCCcCCC
Confidence 99999999999999999998889997
No 5
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.96 E-value=8e-30 Score=164.25 Aligned_cols=94 Identities=19% Similarity=0.405 Sum_probs=84.3
Q ss_pred CceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEc-CCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 3 DSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLA-ETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 3 ~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~-~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
|....++++||+|+++++|+|.. ++...||.|++||++++. ++|++||||+++++|+.|.+|.+++|+||+++|.+|+
T Consensus 2 d~~~~~~~~Gv~~~vl~~G~G~~-p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~ 80 (165)
T 2lkn_A 2 DIIARLREDGIQKRVIQEGRGEL-PDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMR 80 (165)
T ss_dssp CHHHHHHTTSCCCCEEECCSSCC-CCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCC
T ss_pred chhhcccCCCeEEEEEECCcCCC-CCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCc
Confidence 44455788999999999999964 334457999999999986 2599999999999999999999999999999999999
Q ss_pred CCcEEEEEEcCCcccC
Q 033929 82 VGEVAKLTCKPEYAYG 97 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg 97 (108)
+|++++|+|||++|||
T Consensus 81 ~Ge~~~~~ipp~laYG 96 (165)
T 2lkn_A 81 EGEIAQFLCDIKHVVL 96 (165)
T ss_dssp TTCEEEEECCHHHHSS
T ss_pred cCceEEEEECHHHhcC
Confidence 9999999999999999
No 6
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.96 E-value=3.7e-28 Score=149.12 Aligned_cols=101 Identities=32% Similarity=0.552 Sum_probs=91.3
Q ss_pred CCceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 2 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 2 ~~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.+|.+++.+++++|+++++|+|....|.. ||.|++||++++. +|++|+++ +|+.|.+|.+++++||+++|.+|+
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~-gd~V~v~y~g~~~-dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~ 77 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPGPPGSSRPVK-GQVVTVHLQTSLE-NGTRVQEE----PELVFTLGDCDVIQALDLSVPLMD 77 (118)
T ss_dssp TCEEESSSSSSEEEEEEECCCTTCCCCCT-TSEEEEEEEEECT-TSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSC
T ss_pred ccceEECCCCCEEEEEEEcCCCCCccCCC-CCEEEEEEEEEEC-CCCEEECC----CCEEEEECCCChhHHHHHHHhCCC
Confidence 47899998888999999999986334554 6999999999986 99999984 899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|++++|.|||++|||+.+.++.||||
T Consensus 78 ~Ge~~~~~ip~~~ayG~~~~~~~Ip~~ 104 (118)
T 2awg_A 78 VGETAMVTADSKYCYGPQGRSPYIPPH 104 (118)
T ss_dssp TTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCEEEEEEChHHccCCCCCCCccCCC
Confidence 999999999999999999987789986
No 7
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.96 E-value=2.8e-28 Score=148.57 Aligned_cols=98 Identities=33% Similarity=0.629 Sum_probs=88.8
Q ss_pred cCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEE
Q 033929 8 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 8 ~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++|++|+++++|+|.. .|. .||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++
T Consensus 3 ~~~~g~~~~~~~~G~g~~-~~~-~gd~V~v~y~~~~~-dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 79 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGAT-FPK-TGDLVTIHYTGTLE-NGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKAR 79 (113)
T ss_dssp ECGGGCEEEEEECCCSSC-CCC-TTCEEEEEEEEEET-TSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEE
T ss_pred CCCCCeEEEEEECCCCcc-cCC-CCCEEEEEEEEEEC-CCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 456899999999999852 244 46999999999996 999999998877899999999999999999999999999999
Q ss_pred EEEcCCcccCCCCCCCCCCCC
Q 033929 88 LTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 88 ~~ip~~~ayg~~g~~~~ipp~ 108 (108)
|.|||++|||+.+.++.||||
T Consensus 80 v~ip~~~ayG~~~~~~~Ip~~ 100 (113)
T 1yat_A 80 LTIPGPYAYGPRGFPGLIPPN 100 (113)
T ss_dssp EEECGGGTTTTTCBTTTBCTT
T ss_pred EEECHHHCcCCCCCCCCcCCC
Confidence 999999999999987789987
No 8
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.96 E-value=4.2e-28 Score=151.74 Aligned_cols=99 Identities=34% Similarity=0.632 Sum_probs=90.3
Q ss_pred eccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcE
Q 033929 6 DLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEV 85 (108)
Q Consensus 6 d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~ 85 (108)
-.++++|++|+++++|+|. .|. .||.|++||++++. ||++|++++++++|+.|.+|.+++++||+++|.+|++|++
T Consensus 23 ~~~~~~gl~~~~l~~G~G~--~~~-~gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~ 98 (133)
T 2y78_A 23 VVTTESGLKYEDLTEGSGA--EAR-AGQTVSVHYTGWLT-DGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGV 98 (133)
T ss_dssp CEECTTSCEEEEEECCSSC--BCC-TTSEEEEEEEEEET-TSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCE
T ss_pred cEECCCCEEEEEEEcCCCC--CCC-CCCEEEEEEEEEEC-CCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCE
Confidence 3567899999999999984 344 46999999999996 9999999988778999999999999999999999999999
Q ss_pred EEEEEcCCcccCCCCCCCCCCCC
Q 033929 86 AKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 86 ~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
++|.|||++|||+.+.++.||||
T Consensus 99 ~~v~ip~~~aYG~~~~~~~Ipp~ 121 (133)
T 2y78_A 99 RRLTIPPQLGYGARGAGGVIPPN 121 (133)
T ss_dssp EEEEECGGGTTTTTCBTTTBCTT
T ss_pred EEEEECcHHhCCCCCCCCCCCCC
Confidence 99999999999999987789997
No 9
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.96 E-value=8.2e-28 Score=147.61 Aligned_cols=97 Identities=39% Similarity=0.721 Sum_probs=87.3
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCC-------CeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 9 GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHED-------NTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 9 ~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~-------~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.++|++|+++++|+|.. .|.. ||.|++||++++. ||++|++++.. ++|+.|.+|.+++++||+++|.+|+
T Consensus 2 ~p~g~~~~il~~G~g~~-~p~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~ 78 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTN-FPKK-GDVVHCWYTGTLP-DGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMS 78 (119)
T ss_dssp CSCSEEEEEEECCCSSC-CCCT-TCEEEEEEEEECT-TSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCC
T ss_pred CCCccEEEEEEcCCCCC-cCCC-CCEEEEEEEEEEC-CCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCC
Confidence 46899999999999852 4655 5999999999986 99999999863 4799999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCCCCC-CCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAGSPP-DVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g~~~-~ipp~ 108 (108)
+|++++|.|||++|||+.|.++ .||||
T Consensus 79 ~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~ 106 (119)
T 3kz7_A 79 KGEKARLEIEPEWAYGKKGQPDAKIPPN 106 (119)
T ss_dssp TTCEEEEEECGGGTTCTTCBGGGTBCTT
T ss_pred CCCEEEEEECcHHhcCCCCCCCCccCcC
Confidence 9999999999999999999865 69987
No 10
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.95 E-value=1e-27 Score=149.15 Aligned_cols=104 Identities=37% Similarity=0.682 Sum_probs=89.5
Q ss_pred ceeccCCCCEEEEEEEcC-CCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCC
Q 033929 4 SIDLTGDEGVIKKIVRQA-KPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKV 82 (108)
Q Consensus 4 ~~d~~~~~gi~~~il~~G-~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~ 82 (108)
..+++.++.++++++++| .|....|. .||.|++||++++..||++|++++.++.|+.|.+|.+++++||+++|.+|++
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~-~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~ 87 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPK-KGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRK 87 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCC-TTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCT
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCC-CCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCC
Confidence 346667777778899987 55322444 4699999999998339999999987778999999999999999999999999
Q ss_pred CcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 83 GEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 83 Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
|++++|.|||++|||+.+.++.||||
T Consensus 88 Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 113 (129)
T 2vn1_A 88 NEKCLVRIESMYGYGDEGCGESIPGN 113 (129)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCEEEEEEChHHcCCCCCCCCCcCCC
Confidence 99999999999999999988789987
No 11
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.95 E-value=7.5e-28 Score=150.06 Aligned_cols=102 Identities=31% Similarity=0.604 Sum_probs=91.4
Q ss_pred ceeccCCCCEEEE--EEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 4 SIDLTGDEGVIKK--IVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 4 ~~d~~~~~gi~~~--il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
..-..+++|++|+ ++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|+
T Consensus 15 ~~~~~~~~Gl~~~K~~l~~G~G~~-~~~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~ 91 (130)
T 2lgo_A 15 QTQGPGSMSAQLEKKVLTPGDGVT-KPQA-GKKVTVHYDGRFP-DGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMT 91 (130)
T ss_dssp SSCSSSSSSCCCCEEEEECCCSSC-CCCT-TSEEEEEEEEECT-TSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSC
T ss_pred ccceeCCCceEEEEEEEeccCCCc-cCCC-CCEEEEEEEEEEC-CCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCC
Confidence 3456688999999 999999852 2544 6999999999985 999999999877899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|++++|.|||++|||+.+.++.||||
T Consensus 92 ~Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 118 (130)
T 2lgo_A 92 LGEKALFTIPYQLAYGERGYPPVIPPK 118 (130)
T ss_dssp TTEEEEEEECTTTSTTTTCCSTTSCSS
T ss_pred CCCEEEEEECcHHHCCCCCCCCCcCCC
Confidence 999999999999999999988789987
No 12
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.95 E-value=9.7e-28 Score=144.78 Aligned_cols=94 Identities=39% Similarity=0.713 Sum_probs=85.7
Q ss_pred CEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEc
Q 033929 12 GVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCK 91 (108)
Q Consensus 12 gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip 91 (108)
||+|+++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 1 Gl~~~~~~~G~g~~-~~~~-gd~V~v~y~~~~~-dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip 77 (107)
T 2ppn_A 1 GVQVETISPGDGRT-FPKR-GQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTIS 77 (107)
T ss_dssp CEEEEEEECCCSSC-CCCT-TCEEEEEEEEEET-TSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CcEEEEEECcCCCc-CCCC-CCEEEEEEEEEEC-CCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEEC
Confidence 79999999999952 2544 6999999999997 9999999986667999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCC
Q 033929 92 PEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 92 ~~~ayg~~g~~~~ipp~ 108 (108)
|++|||+.+.++.||||
T Consensus 78 ~~~ayG~~~~~~~Ip~~ 94 (107)
T 2ppn_A 78 PDYAYGATGHPGIIPPH 94 (107)
T ss_dssp GGGTTTTTCBTTTBCTT
T ss_pred HHHccCCCCCCCCcCCC
Confidence 99999999987789986
No 13
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.95 E-value=5.1e-27 Score=150.37 Aligned_cols=101 Identities=32% Similarity=0.552 Sum_probs=89.3
Q ss_pred CCceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 2 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 2 ~~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.+|.+++.++.++|+++++|+|....|.. ||.|+|||++++. ||++|+++ +|+.|.+|.+++++||+++|.+|+
T Consensus 34 ~~~~~~~~sG~v~~~vl~~G~G~~~~p~~-gd~V~v~Y~g~l~-dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk 107 (157)
T 2jwx_A 34 EEWLDILGNGLLRKKTLVPGPPGSSRPVK-GQVVTVHLQTSLE-NGTRVQEE----PELVFTLGDCDVIQALDLSVPLMD 107 (157)
T ss_dssp CSCEESSSSSSEEEEEEECCSTTSCCCCT-TEEEEEEEEEECT-TSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSC
T ss_pred cccceECCCCCEEEEEEEccCCCccCCCC-CCEEEEEEEEEEC-CCCEeecC----CCEEEEeCCCChhHHHHHHHcCCC
Confidence 46777887666799999999986334554 5999999999986 99999984 899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCC-CCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAG-SPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g-~~~~ipp~ 108 (108)
+|++++|.||+++|||+.+ .++.||||
T Consensus 108 ~Ge~~~v~IP~~~aYG~~g~~~~~IPp~ 135 (157)
T 2jwx_A 108 VGETAMVTADSKYCYGPQGSRSPYIPPH 135 (157)
T ss_dssp TTCEEEEEECGGGTTTTTCCSSSCCCTT
T ss_pred CCCEEEEEECchhcCCcccccCCCcCCC
Confidence 9999999999999999999 66689997
No 14
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.95 E-value=5.5e-27 Score=145.10 Aligned_cols=101 Identities=32% Similarity=0.537 Sum_probs=89.0
Q ss_pred eccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCC--CCeeEEEEcCCCchhHHHHHHhcCCCCC
Q 033929 6 DLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHE--DNTVFSFELGKGSVIRAWDIALRSMKVG 83 (108)
Q Consensus 6 d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~--~~~~~~~~~g~~~~~~g~~~al~~m~~G 83 (108)
.+.+++|++|+++++|++....+. .||.|++||++++.+||++|++++. +++|+.|.+|.+++++||+++|.+|++|
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g~~~~-~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICHRKTK-GGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCSCCCC-TTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred eEECCCCeEEEEEEcCCCCCCcCC-CCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 456889999999999984323444 4699999999999658999999973 4589999999999999999999999999
Q ss_pred cEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 84 EVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 84 e~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
++++|.|||++|||+.+.+ .||||
T Consensus 86 e~~~~~ip~~~aYG~~g~~-~Ip~~ 109 (125)
T 4dip_A 86 EKRKLIIPPALGYGKEGKG-KIPPE 109 (125)
T ss_dssp CEEEEEECGGGTTTTTCBT-TBCTT
T ss_pred CEEEEEEChHHhcCCCCCC-CCCCC
Confidence 9999999999999999976 79987
No 15
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.95 E-value=3.8e-27 Score=157.13 Aligned_cols=99 Identities=34% Similarity=0.637 Sum_probs=91.1
Q ss_pred eccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcE
Q 033929 6 DLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEV 85 (108)
Q Consensus 6 d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~ 85 (108)
.+++++|++|+++++|+|.. |. .||.|++||++++. ||++|++++.++.|+.|.+|.+++++||+++|.+|++|++
T Consensus 99 ~~~~~sGl~~~vl~~G~G~~--~~-~gd~V~v~Y~g~l~-dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~ 174 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSGAE--AR-AGQTVSVHYTGWLT-DGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGV 174 (209)
T ss_dssp CEECTTSCEEEEEECCCSCB--CC-TTCEEEEEEEEEET-TSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCE
T ss_pred ccCCCCceEEEEEEcCCCCc--CC-CCCEEEEEEEEEEC-CCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCE
Confidence 45688999999999999953 54 46999999999996 9999999988788999999999999999999999999999
Q ss_pred EEEEEcCCcccCCCCCCCCCCCC
Q 033929 86 AKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 86 ~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
++|.|||++|||+.|.++.||||
T Consensus 175 ~~v~Ipp~~aYG~~g~~~~IP~~ 197 (209)
T 3uf8_A 175 RRLTIPPQLGYGARGAAGVIPPN 197 (209)
T ss_dssp EEEEECGGGTTTTTCBTTTBCTT
T ss_pred EEEEECcHHhCCCCCCCCCcCCC
Confidence 99999999999999998889997
No 16
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=4e-27 Score=147.59 Aligned_cols=101 Identities=32% Similarity=0.552 Sum_probs=90.3
Q ss_pred CCceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 2 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 2 ~~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.+|.+++.+++++|+++++|+|....|.. ||.|++||++++. ||++|+++ +|+.|.+|.+++++||+++|.+|+
T Consensus 8 ~~~~~~~~~g~l~~~vl~~G~G~~~~~~~-gd~V~v~Y~g~~~-dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~ 81 (135)
T 2d9f_A 8 EEWLDILGNGLLRKKTLVPGPPGSSRPVK-GQVVTVHLQTSLE-NGTRVQEE----PELVFTLGDCDVIQALDLSVPLMD 81 (135)
T ss_dssp SSCEESSSSSSSEEEEEECCCSSCCCCCT-TSEEEEEEEEEES-SSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSC
T ss_pred ccCcEECCCCCEEEEEEEcCCCCCccCCC-CCEEEEEEEEEEC-CCCEEecC----CCEEEEeCCCChhHHHHHHHhCCC
Confidence 46889998888999999999985334544 6999999999986 99999973 899999999999999999999999
Q ss_pred CCcEEEEEEcCCcccCCCC-CCCCCCCC
Q 033929 82 VGEVAKLTCKPEYAYGSAG-SPPDVPPE 108 (108)
Q Consensus 82 ~Ge~~~~~ip~~~ayg~~g-~~~~ipp~ 108 (108)
+|++++|.|||++|||+.+ .++.||||
T Consensus 82 ~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~ 109 (135)
T 2d9f_A 82 VGETAMVTADSKYCYGPQGSRSPYIPPH 109 (135)
T ss_dssp TTCEEEEEECHHHHTCTTCCSSSCCCTT
T ss_pred CCCEEEEEEChhHccCcCCcCCCccCCC
Confidence 9999999999999999998 66689986
No 17
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.94 E-value=1.2e-26 Score=151.57 Aligned_cols=98 Identities=30% Similarity=0.456 Sum_probs=88.0
Q ss_pred cCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCC-chhHHHHHHhcCCCCCcEE
Q 033929 8 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKG-SVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 8 ~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~-~~~~g~~~al~~m~~Ge~~ 86 (108)
++++||+|+++++|+|. .|.. ||.|++||++++.++|++|++++.++.|+.|.+|.+ ++++||+++|.+|++|+++
T Consensus 46 ~~~~gl~~~vl~~G~G~--~~~~-Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~ 122 (180)
T 2f4e_A 46 VLDEKVSKQIIKEGHGS--KPSK-YSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (180)
T ss_dssp EEETTEEEEEEECCBSC--CBCT-TCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEE
T ss_pred ECCCceEEEEEeCCCCC--CCCC-CCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEE
Confidence 35679999999999985 3544 699999999999756999999998788999999999 9999999999999999999
Q ss_pred EEEEcCCcccCCCCC--CCCCCCC
Q 033929 87 KLTCKPEYAYGSAGS--PPDVPPE 108 (108)
Q Consensus 87 ~~~ip~~~ayg~~g~--~~~ipp~ 108 (108)
+|.|||++|||..++ ++.||||
T Consensus 123 ~v~iPp~~aYG~~g~~~~~~Ip~~ 146 (180)
T 2f4e_A 123 LVHVGWELAYGKEGNFSFPNVPPM 146 (180)
T ss_dssp EEEECGGGTTTTTCBSSSSCBCTT
T ss_pred EEEECchHhCCcCCcccCCCcCCC
Confidence 999999999999987 4579986
No 18
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.94 E-value=2.8e-27 Score=152.97 Aligned_cols=97 Identities=28% Similarity=0.484 Sum_probs=87.5
Q ss_pred ccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEE
Q 033929 7 LTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 7 ~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~ 86 (108)
+++++||+|+++++|+|.. .|.. ||.|+|||++++. ||++|++++.++.|+.|.+| ++++||+++|.+|++|+++
T Consensus 33 ~~~~sGl~~~vl~~G~G~~-~~~~-gd~V~v~Y~g~l~-dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~ 107 (167)
T 1jvw_A 33 VKLPSGLVFQRIARGSGKR-APAI-DDKCEVHYTGRLR-DGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDRW 107 (167)
T ss_dssp EECTTSCEEEEEECCCCSB-CCCT-TCCEEEEEEEECT-TSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCEE
T ss_pred EECCCCEEEEEEEcCCCCc-CCCC-CCEEEEEEEEEEC-CCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCEE
Confidence 4678999999999999853 2554 5999999999986 99999999876789999994 8999999999999999999
Q ss_pred EEEEcCCcccCCCCCCCCCCCC
Q 033929 87 KLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 87 ~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|.|||++|||+.+.++.||||
T Consensus 108 ~~~Ip~~laYG~~g~~~~Ipp~ 129 (167)
T 1jvw_A 108 RLFIPYDLAYGVTGGGGMIPPY 129 (167)
T ss_dssp EEEECGGGTTTTTCSSSSSCTT
T ss_pred EEEECchhhCCCCCCCCCcCCC
Confidence 9999999999999988789997
No 19
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.94 E-value=3.9e-26 Score=157.97 Aligned_cols=103 Identities=53% Similarity=0.944 Sum_probs=94.1
Q ss_pred Cceecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCC
Q 033929 3 DSIDLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSM 80 (108)
Q Consensus 3 ~~~d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m 80 (108)
+++|++ +++||+|+++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||++||.+|
T Consensus 41 ~~~di~~~~~~gl~~~vl~~G~G~~-~~~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm 117 (280)
T 1q1c_A 41 EGVDISPKQDEGVLKVIKREGTGTE-MPMI-GDRVFVHYTGWLL-DGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATM 117 (280)
T ss_dssp CCEECCSSCSSSEEEEEEECCSSSC-CCCT-TCEEEEEEEEEET-TSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTC
T ss_pred cccccccCCCCceEEEEEeCCCCCc-CCCC-CCEEEEEEEEEEC-CCCEEEecccCCCCEEEEECCcChhHHHHHHHhcC
Confidence 366888 89999999999999963 3554 5999999999996 99999999887789999999999999999999999
Q ss_pred CCCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 81 KVGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 81 ~~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
++|++++|.|||++|||+.|.++.||||
T Consensus 118 ~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~ 145 (280)
T 1q1c_A 118 KVGEVCHITCKPEYAYGSAGSPPKIPPN 145 (280)
T ss_dssp CTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCCEEEEEECcHHhCCCcCccCCCCCC
Confidence 9999999999999999999988889986
No 20
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.94 E-value=1.4e-26 Score=154.70 Aligned_cols=96 Identities=26% Similarity=0.442 Sum_probs=87.5
Q ss_pred ccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEE
Q 033929 7 LTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 7 ~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~ 86 (108)
+++++|++|+++++|+|. .|.. ||.|+|||++++. ||++|++++.++.|+.|.+| ++++||+++|.+|++|+++
T Consensus 102 ~~~~sGl~y~vl~~G~G~--~p~~-gD~V~V~Y~g~l~-dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~ 175 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNGV--KPGK-SDTVTVEYTGRLI-DGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTW 175 (213)
T ss_dssp EECTTSCEEEEEECCCSC--CCCT-TCEEEEEEEEEET-TSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred EECCCccEEEEEecCCCc--cCCC-CCEEEEEEEEEEC-CCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEE
Confidence 567899999999999995 4554 6999999999997 99999999877789999994 8999999999999999999
Q ss_pred EEEEcCCcccCCCCCCCCCCCC
Q 033929 87 KLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 87 ~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|+|||+++||+.+.++.||||
T Consensus 176 ~v~IP~~laYG~~g~~~~Ipp~ 197 (213)
T 1fd9_A 176 EIYVPSGLAYGPRSVGGPIGPN 197 (213)
T ss_dssp EEEECGGGTTTTCCCSSSCCTT
T ss_pred EEEECchhccCccCCCCCCCCC
Confidence 9999999999999987789997
No 21
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.94 E-value=5.1e-27 Score=146.05 Aligned_cols=98 Identities=29% Similarity=0.491 Sum_probs=87.0
Q ss_pred ccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcC------C
Q 033929 7 LTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRS------M 80 (108)
Q Consensus 7 ~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~------m 80 (108)
.++++||+|+++++|+|. .+. .||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+ |
T Consensus 8 ~~~~~Gl~~~~l~~G~G~--~~~-~gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m 83 (129)
T 1u79_A 8 SVSPSGLAFCDKVVGYGP--EAV-KGQLIKAHYVGKLE-NGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPM 83 (129)
T ss_dssp EECTTSCEEEEEECCSSC--BCC-TTCEEEEEEEEECT-TSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCC
T ss_pred EECCCCeEEEEEEcCCCC--CCC-CCCEEEEEEEEEEC-CCCEEEecCCCCCCEEEEeCCCCccHHHHHHhccccccccc
Confidence 457789999999999985 344 46999999999986 9999999986568999999999999999999998 9
Q ss_pred CCCcEEEEEEcCCcccCCCCCC-----CCCCCC
Q 033929 81 KVGEVAKLTCKPEYAYGSAGSP-----PDVPPE 108 (108)
Q Consensus 81 ~~Ge~~~~~ip~~~ayg~~g~~-----~~ipp~ 108 (108)
++|++++|.|||++|||+.+.+ +.||||
T Consensus 84 ~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~ 116 (129)
T 1u79_A 84 LTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPA 116 (129)
T ss_dssp BTTCEEEEEECGGGTTGGGCEEEETTEEEECTT
T ss_pred CCCCEEEEEEChHHccCCCCCCccccCCcCCCC
Confidence 9999999999999999999863 368886
No 22
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.94 E-value=2.3e-26 Score=153.93 Aligned_cols=93 Identities=28% Similarity=0.459 Sum_probs=85.3
Q ss_pred ccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEE
Q 033929 7 LTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 7 ~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~ 86 (108)
+++++||+|+++++|+|. .|.. ||.|+|||++++. ||++|+++ +.|+.|.+| ++|+||+++|.+|++|+++
T Consensus 113 ~~~~sGl~y~vl~~G~G~--~p~~-gd~V~V~Y~g~l~-dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~ 183 (219)
T 3oe2_A 113 KELADGILMTELTPGTGP--KPDA-NGRVEVRYVGRLP-DGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKW 183 (219)
T ss_dssp EECGGGCEEEEEECCCSC--CCCT-TSEEEEEEEEECT-TSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEE
T ss_pred EECCCCeEEEEEecCCCc--cCCC-CCEEEEEEEEEEC-CCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEE
Confidence 457899999999999995 4655 5999999999997 99999998 589999998 7999999999999999999
Q ss_pred EEEEcCCcccCCCCCCCCCCCC
Q 033929 87 KLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 87 ~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+|+|||++|||+.|.++.||||
T Consensus 184 ~v~IPp~lAYG~~g~~~~IPpn 205 (219)
T 3oe2_A 184 RLVIPSDQAYGAEGAGDLIDPF 205 (219)
T ss_dssp EEEECGGGTTTTTCBTTTBCTT
T ss_pred EEEECchhcCCCCCCCCCCCCC
Confidence 9999999999999988789997
No 23
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.93 E-value=1.1e-25 Score=151.22 Aligned_cols=94 Identities=36% Similarity=0.677 Sum_probs=85.7
Q ss_pred cCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEE
Q 033929 8 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 8 ~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
++++|++|+++++|+|. .|.. ||.|+|||++++. ||++|++++.++.|+.|.+| ++++||+++|.+|++|++++
T Consensus 118 ~~~sGl~y~vl~~G~G~--~p~~-gD~V~V~Y~g~l~-dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~ 191 (224)
T 1q6h_A 118 TSSTGLVYQVVEAGKGE--APKD-SDTVVVNYKGTLI-DGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIK 191 (224)
T ss_dssp ECTTSCEEEEEECCSSC--CCCT-TCEEEEEEEEEET-TSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEE
T ss_pred ECCCceEEEEEecccCc--cccC-CCEEEEEEEEEeC-CCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEE
Confidence 46899999999999995 3544 6999999999997 99999999987789999994 89999999999999999999
Q ss_pred EEEcCCcccCCCCCCCCCCCC
Q 033929 88 LTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 88 ~~ip~~~ayg~~g~~~~ipp~ 108 (108)
|+|||+++||+.+.++ ||||
T Consensus 192 v~IP~~laYG~~g~~~-IPp~ 211 (224)
T 1q6h_A 192 LVIPPELAYGKAGVPG-IPPN 211 (224)
T ss_dssp EEECGGGTTTTTCBTT-BCTT
T ss_pred EEECchhhcCcCCCCC-CCCC
Confidence 9999999999999876 9987
No 24
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.92 E-value=2e-25 Score=162.25 Aligned_cols=103 Identities=49% Similarity=0.877 Sum_probs=69.7
Q ss_pred Cceecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCC
Q 033929 3 DSIDLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSM 80 (108)
Q Consensus 3 ~~~d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m 80 (108)
+.+||+ +++||+|+++++|+|.. .|.. ||.|+|||++++. ||++|++|+.++.|+.|.+|.+++++||+++|.+|
T Consensus 21 ~~~~~~~~~~~g~~~~~~~~G~g~~-~~~~-gd~v~v~y~~~~~-~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m 97 (457)
T 1kt0_A 21 QGEDITSKKDRGVLKIVKRVGNGEE-TPMI-GDKVYVHYKGKLS-NGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATM 97 (457)
T ss_dssp ------------CEEEC---------CCCB-TCEEEEEEEEEC------CBC------CEEEETTSTTSCHHHHHHHTTC
T ss_pred CcccccCCCCCcEEEEEEECCCCCC-CCCC-CCEEEEEEEEEEC-CCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhC
Confidence 456888 89999999999999963 3554 6999999999985 99999999987789999999999999999999999
Q ss_pred CCCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 81 KVGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 81 ~~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
++|++++|+|||+++||..|.++.||||
T Consensus 98 ~~Ge~~~~~i~~~~~yg~~g~~~~i~~~ 125 (457)
T 1kt0_A 98 KRGEICHLLCKPEYAYGSAGSLPKIPSN 125 (457)
T ss_dssp CTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCCEEEEEEChHHhccccCCCCCCCCC
Confidence 9999999999999999999998889986
No 25
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.91 E-value=4e-24 Score=127.92 Aligned_cols=79 Identities=38% Similarity=0.723 Sum_probs=73.4
Q ss_pred CCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCCCCCCCCC
Q 033929 29 TEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 29 ~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
...||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+.+.++.||||
T Consensus 6 ~~~gd~V~v~y~~~~~-dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~ 84 (102)
T 2pbc_A 6 SRKGDVLHMHYTGKLE-DGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGG 84 (102)
T ss_dssp CCTTCEEEEEEEEECT-TSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred CCCCCEEEEEEEEEEC-CCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcC
Confidence 3457999999999985 999999998777899999999999999999999999999999999999999999987789986
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.90 E-value=9.3e-26 Score=160.45 Aligned_cols=101 Identities=39% Similarity=0.765 Sum_probs=0.0
Q ss_pred eeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCc
Q 033929 5 IDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGE 84 (108)
Q Consensus 5 ~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge 84 (108)
+...+++||+|+++++|+|.. .|.. ||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++|+
T Consensus 5 ~~~~~~~Gl~~~i~~~G~G~~-~~~~-gd~V~v~Y~g~~~-dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~Ge 81 (356)
T 3jxv_A 5 ENEIGKQGLKKKLLKEGEGWD-TPEV-GDEVEVHYTGTLL-DGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGE 81 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceECCCCeEEEEEEeecCCc-cCCC-CCEEEEEEEEEEC-CCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCCC
Confidence 345678999999999999942 4554 5999999999997 999999999888899999999999999999999999999
Q ss_pred EEEEEEcCCcccCCCCCCCCCCCC
Q 033929 85 VAKLTCKPEYAYGSAGSPPDVPPE 108 (108)
Q Consensus 85 ~~~~~ip~~~ayg~~g~~~~ipp~ 108 (108)
+++|+|||++|||+.|.++.||||
T Consensus 82 ~~~~~ip~~~aYG~~g~~~~Ip~~ 105 (356)
T 3jxv_A 82 NALFTIPPELAYGESGSPPTIPAN 105 (356)
T ss_dssp ------------------------
T ss_pred EEEEEEChHHhCCCCCCCCCcCCC
Confidence 999999999999999998889986
No 27
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.90 E-value=1.4e-23 Score=147.44 Aligned_cols=98 Identities=30% Similarity=0.456 Sum_probs=87.4
Q ss_pred cCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCC-chhHHHHHHhcCCCCCcEE
Q 033929 8 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKG-SVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 8 ~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~-~~~~g~~~al~~m~~Ge~~ 86 (108)
+.++||+|+++++|+|. .|.. ||.|+|||++++.++|++|++++.++.|+.|.+|.+ ++++||+++|.+|++||++
T Consensus 46 ~~~~~~~~~~~~~g~g~--~~~~-gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~ 122 (338)
T 2if4_A 46 VLDEKVSKQIIKEGHGS--KPSK-YSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERA 122 (338)
T ss_dssp EEETTEEEEEEECCBSC--CCCT-TCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEE
T ss_pred eCCCCeEEEEEeCCCCC--CCCC-CCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeE
Confidence 35689999999999985 4554 699999999999745999999987778999999998 8999999999999999999
Q ss_pred EEEEcCCcccCCCCC--CCCCCCC
Q 033929 87 KLTCKPEYAYGSAGS--PPDVPPE 108 (108)
Q Consensus 87 ~~~ip~~~ayg~~g~--~~~ipp~ 108 (108)
+|+|||+++||..+. .+.||||
T Consensus 123 ~~~i~~~~~yg~~~~~~~~~ip~~ 146 (338)
T 2if4_A 123 LVHVGWELAYGKEGNFSFPNVPPM 146 (338)
T ss_dssp EEEECGGGSSCSSCCCSSSCCCTT
T ss_pred EEEECHHHhcCCCCCCCCCCCCCC
Confidence 999999999999987 3568886
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.90 E-value=5.7e-23 Score=146.09 Aligned_cols=101 Identities=36% Similarity=0.578 Sum_probs=89.2
Q ss_pred eeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccC-CCCeeEEEEcCCCchhHHHHHHhcCCCCC
Q 033929 5 IDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTH-EDNTVFSFELGKGSVIRAWDIALRSMKVG 83 (108)
Q Consensus 5 ~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~-~~~~~~~~~~g~~~~~~g~~~al~~m~~G 83 (108)
.+++.+++++++++++|+|.. +|.. ||.|++||++++. ||++|+++. .+++|+.|.+|.+++++||+++|.+|++|
T Consensus 238 ~dv~~d~~~~~~i~~~g~g~~-~~~~-gd~V~v~y~g~l~-dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~G 314 (356)
T 3jxv_A 238 TEIGDDKKILKKVLKEXEGYE-RPNE-GAVVTVKITGKLQ-DGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKG 314 (356)
T ss_dssp EEESTTCCEEEEEEECCBSSC-CCCT-TCEEEEEEEEEES-SSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBT
T ss_pred cccccccceeEEeeecccccC-CCCC-CCEEEEEEEEEEC-CCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCC
Confidence 467889999999999999843 4655 6999999999997 999999884 55689999999999999999999999999
Q ss_pred cEEEEEEcCCcccCCCCC--CCCCCCC
Q 033929 84 EVAKLTCKPEYAYGSAGS--PPDVPPE 108 (108)
Q Consensus 84 e~~~~~ip~~~ayg~~g~--~~~ipp~ 108 (108)
|+++|+|||++|||+.+. .+.||||
T Consensus 315 e~~~v~ip~~~aYG~~~~~~~~~Ip~~ 341 (356)
T 3jxv_A 315 EVALVTIPPEYAYGSTESKQDAIVPPN 341 (356)
T ss_dssp CEEEEEECGGGTTTTSCEESSSEECTT
T ss_pred CEEEEEEChHHccCCCCcCCCCcCCcC
Confidence 999999999999999874 3467876
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.85 E-value=1.4e-20 Score=130.19 Aligned_cols=94 Identities=34% Similarity=0.640 Sum_probs=82.8
Q ss_pred ecc--CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---hhHHHHHHhcCC
Q 033929 6 DLT--GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---VIRAWDIALRSM 80 (108)
Q Consensus 6 d~~--~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---~~~g~~~al~~m 80 (108)
++. .+++++|+++++|+|.. .|. .||.|++||++++ +|++|++ +++.|.+|.++ +++||+++|.+|
T Consensus 161 ~~~~~~d~gl~~~il~~G~G~~-~~~-~gd~V~i~y~g~~--dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~gm 231 (280)
T 1q1c_A 161 DLTEEEDGGIIRRIQTRGEGYA-KPN-EGAIVEVALEGYY--KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQRM 231 (280)
T ss_dssp ECCTTCSSSEEEEEEECCSCSC-CCC-TTCEEEEEEEEEE--TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred ccccccccceeEEeeecccccc-ccc-CCceEEEEEEEEe--CCEEEec-----CCeEEEecCCcccccchhHHHHHhCC
Confidence 455 78999999999999852 344 4699999999998 8999997 59999999988 599999999999
Q ss_pred CCCcEEEEEEcCCcccCCCCCCC-CCCCC
Q 033929 81 KVGEVAKLTCKPEYAYGSAGSPP-DVPPE 108 (108)
Q Consensus 81 ~~Ge~~~~~ip~~~ayg~~g~~~-~ipp~ 108 (108)
++||+++|.|||+++||+.+.++ .||||
T Consensus 232 k~Ge~~~v~ip~~~~yG~~~~~~~~IP~~ 260 (280)
T 1q1c_A 232 EKGEHSIVYLKPSYAFGSVGKEKFQIPPN 260 (280)
T ss_dssp CTTCEEEEEECGGGTTTTTCBGGGTBCTT
T ss_pred CCCcEEEEEEChhHcCCcCCCccCccCCC
Confidence 99999999999999999998765 58886
No 30
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.82 E-value=2.5e-20 Score=120.36 Aligned_cols=72 Identities=24% Similarity=0.405 Sum_probs=66.6
Q ss_pred CCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCC
Q 033929 28 PTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAG 100 (108)
Q Consensus 28 p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g 100 (108)
.++.||.|++||++++. ||++|++++.+++|+.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~-dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLD-DGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEET-TSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEEC-CCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 34557999999999996 9999999987668999999999999999999999999999999999999999975
No 31
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.82 E-value=4.2e-20 Score=118.15 Aligned_cols=70 Identities=33% Similarity=0.559 Sum_probs=64.4
Q ss_pred CCCCEEEEEEEEEEcCCCcEEeccCCC-------------CeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCccc
Q 033929 30 EDLPLVDVHYEGSLAETGEVFDTTHED-------------NTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAY 96 (108)
Q Consensus 30 ~~gd~V~v~y~~~~~~~g~~~~st~~~-------------~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ay 96 (108)
+.||.|++||++++ ||++|++|+.+ ++|+.|.+|.+++++||++||.+|++|++++|.|||++||
T Consensus 3 ~~Gd~V~v~Y~g~l--dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 3 EKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CTTCEEEEEEEEEE--TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCEEEEEEEEEE--CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 34799999999999 89999999752 3699999999999999999999999999999999999999
Q ss_pred CCCCC
Q 033929 97 GSAGS 101 (108)
Q Consensus 97 g~~g~ 101 (108)
|+++.
T Consensus 81 G~~~~ 85 (157)
T 3pr9_A 81 GKRDP 85 (157)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 99874
No 32
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.81 E-value=2.5e-19 Score=114.02 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
++++.||.|++||++++.++|++|++++.. +|+.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 345567999999999984489999999864 79999999999999999999999999999999999999999864
No 33
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.79 E-value=1.3e-19 Score=115.23 Aligned_cols=70 Identities=31% Similarity=0.569 Sum_probs=64.2
Q ss_pred CCCEEEEEEEEEEcCCCcEEeccCC-------------CCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccC
Q 033929 31 DLPLVDVHYEGSLAETGEVFDTTHE-------------DNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYG 97 (108)
Q Consensus 31 ~gd~V~v~y~~~~~~~g~~~~st~~-------------~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg 97 (108)
.||.|++||++++. +|++|++|+. ...|+.|.+|.+++++||+++|.+|++|++++|.|||++|||
T Consensus 4 ~gd~V~v~Y~g~~~-dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aYG 82 (151)
T 1ix5_A 4 KGVKIKVDYIGKLE-SGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAYG 82 (151)
T ss_dssp TTCEEEECCEECCT-TSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSSC
T ss_pred CCCEEEEEEEEEEC-CCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHCC
Confidence 46999999999985 9999999973 236999999999999999999999999999999999999999
Q ss_pred CCCC
Q 033929 98 SAGS 101 (108)
Q Consensus 98 ~~g~ 101 (108)
+++.
T Consensus 83 ~~~~ 86 (151)
T 1ix5_A 83 NRNE 86 (151)
T ss_dssp SCCS
T ss_pred CCCc
Confidence 9864
No 34
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.78 E-value=2.3e-18 Score=120.71 Aligned_cols=97 Identities=30% Similarity=0.578 Sum_probs=82.2
Q ss_pred CceeccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---hhHHHHHHhcC
Q 033929 3 DSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---VIRAWDIALRS 79 (108)
Q Consensus 3 ~~~d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---~~~g~~~al~~ 79 (108)
.+.++++++||+++|+++|+|. .+|.. |+.|+|||++++ +|++|+++ |+.|.+|.+. ++++|++||..
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~-~~p~~-~~~v~v~y~g~~--~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~ 87 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGY-AKPNE-GAIVEVALEGYY--KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQR 87 (336)
T ss_dssp -----CCTTSEEEEEEECCCCS-CCCCT-TCEEEEEEEEEE--TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTT
T ss_pred cceeecCCCcEEEEEEeCCCCC-CCCCC-CCeEEEEEEEEE--CCEEEecC-----CeEEEeCCCCccccchHHHHHHhc
Confidence 4678899999999999999985 35765 599999999998 89999984 9999999886 58999999999
Q ss_pred CCCCcEEEEEEcCCcccCCCCCCC-CCCCC
Q 033929 80 MKVGEVAKLTCKPEYAYGSAGSPP-DVPPE 108 (108)
Q Consensus 80 m~~Ge~~~~~ip~~~ayg~~g~~~-~ipp~ 108 (108)
|++|+++.+.|+|+++||..|... .||+|
T Consensus 88 ~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~ 117 (336)
T 1p5q_A 88 MEKGEHSIVYLKPSYAFGSVGKEKFQIPPN 117 (336)
T ss_dssp CCTTCEEEEEECTTTTTTTTCBGGGTBCSS
T ss_pred CCCCCeEEEEECCccccCcCCCCccCCCCC
Confidence 999999999999999999999765 47764
No 35
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.78 E-value=4.7e-19 Score=119.33 Aligned_cols=70 Identities=33% Similarity=0.559 Sum_probs=64.3
Q ss_pred CCCCEEEEEEEEEEcCCCcEEeccCCC-------------CeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCccc
Q 033929 30 EDLPLVDVHYEGSLAETGEVFDTTHED-------------NTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAY 96 (108)
Q Consensus 30 ~~gd~V~v~y~~~~~~~g~~~~st~~~-------------~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ay 96 (108)
+.||.|++||++++ ||++|++|+.+ +.|+.|.+|.+++++||++||.+|++|+++.|.|||++||
T Consensus 3 ~~Gd~V~v~Y~g~l--dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 3 EKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CTTCEEEEEEEEEE--TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCEEEEEEEEEE--CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 34799999999999 89999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCC
Q 033929 97 GSAGS 101 (108)
Q Consensus 97 g~~g~ 101 (108)
|+++.
T Consensus 81 Ge~~~ 85 (231)
T 3prb_A 81 GKRDP 85 (231)
T ss_dssp CCCCG
T ss_pred CCCCh
Confidence 99864
No 36
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.78 E-value=1.1e-18 Score=112.98 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=64.3
Q ss_pred CCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 31 DLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 31 ~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
.||+|+++|++++. +|++|++++.+ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+++.
T Consensus 5 ~gd~V~v~Y~g~~~-dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~ 73 (171)
T 2k8i_A 5 KDLVVSLAYQVRTE-DGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (171)
T ss_dssp TTEEEEEEEEEEET-TSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCT
T ss_pred CCCEEEEEEEEEEC-CCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCCh
Confidence 46999999999986 99999999864 79999999999999999999999999999999999999999853
No 37
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.78 E-value=1e-18 Score=115.20 Aligned_cols=69 Identities=22% Similarity=0.350 Sum_probs=64.3
Q ss_pred CCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 31 DLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 31 ~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
.||+|+|+|++++. +|++|++|+.+ +|+.|.+|.++++++|+++|.+|++|++++|.|||++|||+++.
T Consensus 5 ~gd~V~v~Y~g~~~-dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 5 KDLVVSLAYQVRTE-DGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp SSCEEEEEEEEEET-TTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCEEEEEEEEEEC-CCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 46999999999985 99999999864 79999999999999999999999999999999999999999764
No 38
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.72 E-value=1.9e-17 Score=106.01 Aligned_cols=64 Identities=27% Similarity=0.395 Sum_probs=59.8
Q ss_pred CCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 31 DLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 31 ~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
.||.|++||+++ . ||++|++++ +.|.+|.+++++||+++|.+|++|+++.|.|||++|||+++.
T Consensus 5 ~gd~V~v~Y~g~-~-dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~ 68 (158)
T 3cgm_A 5 QDKVVTIRYTLQ-V-EGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDP 68 (158)
T ss_dssp TTEEEEEEEEEE-E-TTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCG
T ss_pred CCCEEEEEEEEE-E-CCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCc
Confidence 469999999999 5 999999985 899999999999999999999999999999999999999763
No 39
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.72 E-value=1.1e-17 Score=101.73 Aligned_cols=70 Identities=14% Similarity=0.267 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 28 PTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 28 p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
+++.||.|+++|++++ ||++|++++ .+|+.|.+|.+++++||+++|.+|++|++++|.||+...||..+.
T Consensus 29 ~~~~gD~V~v~Y~g~~--dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~ 98 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV--DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL 98 (113)
T ss_dssp CCCSSEEEEEEEEEEE--TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG
T ss_pred CCCCCCEEEEEEEEEE--CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC
Confidence 4455799999999998 899999986 489999999999999999999999999999999973333998754
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.57 E-value=3.6e-14 Score=103.03 Aligned_cols=94 Identities=33% Similarity=0.592 Sum_probs=81.3
Q ss_pred eccCCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---hhHHHHHHhcCCCC
Q 033929 6 DLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---VIRAWDIALRSMKV 82 (108)
Q Consensus 6 d~~~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---~~~g~~~al~~m~~ 82 (108)
+++.++++.++++++|.|.. +|.. ||.|++||++++ +|++|++ +++.|.+|.+. ++++|+.||..|+.
T Consensus 141 ~~~~dg~~~k~i~~~g~~~~-~p~~-g~~V~v~y~g~~--~g~~f~~-----~~~~f~~g~g~~~~v~~~~e~al~~~~~ 211 (457)
T 1kt0_A 141 DLFEDGGIIRRTKRKGEGYS-NPNE-GATVEIHLEGRC--GGRMFDC-----RDVAFTVGEGEDHDIPIGIDKALEKMQR 211 (457)
T ss_dssp ETTSSSSEEEEEEECCBCSC-CCCT-TCEEEEEEEEEE--TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTTCCB
T ss_pred cccCCcceEEEEEecCCCCC-CCCC-CCEEEEEEEEEe--CCeEEec-----CceEEEeCCCccccCChHHHHHHHhCCC
Confidence 56678899999999998753 5655 599999999998 7999997 57999999764 89999999999999
Q ss_pred CcEEEEEEcCCcccCCCCCCC-CCCCC
Q 033929 83 GEVAKLTCKPEYAYGSAGSPP-DVPPE 108 (108)
Q Consensus 83 Ge~~~~~ip~~~ayg~~g~~~-~ipp~ 108 (108)
|+++.|.++|.++|+..|... .||||
T Consensus 212 ge~~~l~i~P~~ay~~~g~~~~~ip~~ 238 (457)
T 1kt0_A 212 EEQCILYLGPRYGFGEAGKPKFGIEPN 238 (457)
T ss_dssp TCEEEEEECGGGTTCSSCBGGGTBCTT
T ss_pred CCEEEEEECcccccCCCCCcccCCCCC
Confidence 999999999999999998643 57764
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.49 E-value=5.1e-14 Score=102.34 Aligned_cols=71 Identities=21% Similarity=0.399 Sum_probs=64.4
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
.++..||.|++||+++. ||+.|++++ ..|+.|.+|.+++++||+++|.||++|+++.|.+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~--dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV--DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL 226 (432)
T ss_dssp SCCCTTCEEEECEEEES--SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT
T ss_pred CCCCCCCEEEEEEEEee--CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC
Confidence 35556799999999994 999999987 479999999999999999999999999999999999999998764
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.34 E-value=5.1e-13 Score=96.07 Aligned_cols=70 Identities=19% Similarity=0.311 Sum_probs=61.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcCCcccCCCCC
Q 033929 28 PTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGS 101 (108)
Q Consensus 28 p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~~~ayg~~g~ 101 (108)
++..||.|++||+++. ||+.|+++. ..++.|.+|.+++++||+++|.+|++|+++.|.+++...|+..+.
T Consensus 160 ~~~~gD~V~i~y~g~~--dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l 229 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI--DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL 229 (392)
T ss_dssp CCCTTCEEEEEEEEES--SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT
T ss_pred CCCCCCEEEEEEEEEE--CCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC
Confidence 4456799999999994 899999874 479999999999999999999999999999999987778887654
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.31 E-value=9e-07 Score=64.37 Aligned_cols=58 Identities=21% Similarity=0.135 Sum_probs=49.1
Q ss_pred CCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcC
Q 033929 28 PTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKP 92 (108)
Q Consensus 28 p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~ 92 (108)
|+..||.|+++|+++. ||..|+++.. .++.+.+|.++ + |+++|.||++|+...|.+..
T Consensus 154 ~a~~gD~V~id~~~~~--dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN--EEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC--TTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE
T ss_pred ccCCCCEEEEEEEEEE--CCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee
Confidence 5566899999999885 8999998643 67888899877 4 99999999999999998854
No 44
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=78.37 E-value=5 Score=32.05 Aligned_cols=61 Identities=30% Similarity=0.361 Sum_probs=44.4
Q ss_pred CCCCEEEEEEEEEEcCCCcEEec----------------cC-----------CCCeeEEEEcCCCchhHHHHHHhcCCCC
Q 033929 30 EDLPLVDVHYEGSLAETGEVFDT----------------TH-----------EDNTVFSFELGKGSVIRAWDIALRSMKV 82 (108)
Q Consensus 30 ~~gd~V~v~y~~~~~~~g~~~~s----------------t~-----------~~~~~~~~~~g~~~~~~g~~~al~~m~~ 82 (108)
..|+.+.|.|+..+..+|..-.. .+ +....+.|.+|.+.+.+-++..+..|..
T Consensus 562 ~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms~ 641 (950)
T 3htx_A 562 TNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMTV 641 (950)
T ss_dssp CTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCCT
T ss_pred CCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeeccc
Confidence 34799999999987633321111 00 0125788999999999999999999999
Q ss_pred CcEEEEEE
Q 033929 83 GEVAKLTC 90 (108)
Q Consensus 83 Ge~~~~~i 90 (108)
|+...|..
T Consensus 642 gqT~~F~~ 649 (950)
T 3htx_A 642 GEYASFKM 649 (950)
T ss_dssp TCEEEEEE
T ss_pred cceeEEec
Confidence 99998884
No 45
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=67.59 E-value=23 Score=23.26 Aligned_cols=51 Identities=22% Similarity=0.373 Sum_probs=37.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+++.++..+++|-+
T Consensus 83 ~~l~~Gdlv~iD~g~~~--~GY~sD------~tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~ 142 (264)
T 3tb5_A 83 KVLKDGDLIKVDMCVDL--KGAISD------SCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNR 142 (264)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEE------EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred ccccCCCEEEEecccee--cceeee------cccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCC
Confidence 46677899999998887 676555 34567777543 45778888999999865
No 46
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=65.58 E-value=27 Score=24.44 Aligned_cols=51 Identities=10% Similarity=0.240 Sum_probs=36.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~g~~~al~~m~~Ge~ 85 (108)
+..+.||.|.|++-+.. ||-.-|. ..+|.+|... ...+++.|+..+++|-+
T Consensus 119 ~~L~~GDiV~ID~G~~~--dGY~sD~------arT~~vg~~~~~l~~~~~~al~aai~~~~pG~~ 175 (358)
T 3fm3_A 119 IVLKEDDVLKIDFGTHS--DGRIMDS------AFTVAFKENLEPLLVAAREGTETGIKSLGVDVR 175 (358)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred eEecCCCEEEEEeeEEE--CCEEEEE------EEeccccccchhHHHHHHHHHHHHHHhhhcCCc
Confidence 46677899999999988 8877664 4567777432 23456777777777654
No 47
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=59.38 E-value=38 Score=22.90 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=37.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-|. ..+|.+|... +..+++.++..+++|-+
T Consensus 71 ~~L~~GDiv~iD~G~~~--~GY~sD~------tRT~~vG~~~~~l~~~~~~a~~~~i~~~kpG~~ 127 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHI--DGFIADT------AVTVRVGMEEDELMEAAKEALNAAISVARAGVE 127 (295)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEETTSCCCHHHHHHHHHHHHHHHHCSTTCB
T ss_pred ccccCCCEEEEEEeEEE--CCEEEEE------EEEEEeCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 46677899999999887 7766553 5667777522 45677788888888764
No 48
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=57.75 E-value=36 Score=23.91 Aligned_cols=51 Identities=10% Similarity=0.240 Sum_probs=36.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.|++-+.. +|-.-|. ..+|.++..+ +..+++.++..+++|-+
T Consensus 121 ~~L~~GDlV~ID~G~~~--~GY~sD~------tRT~~v~~~~~~l~~av~eA~~aai~~~kPGv~ 177 (360)
T 2nw5_A 121 IVLKEDDVLKIDFGTHS--DGRIMDS------AFTVAFKENLEPLLVAAREGTETGIKSLGVDVR 177 (360)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEECCGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cCcCCCCEEEEEEEEEE--CCEEEEE------EEEEEcCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45667899999998887 7876664 3455565322 45678888888898865
No 49
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=53.41 E-value=52 Score=22.63 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=38.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++.+.+ +|-.-|. ..+|.+|.-. +..+++.++..+++|-+
T Consensus 142 ~~l~~GD~v~iD~g~~~--~GY~sD~------tRT~~vG~~~~~~~~l~~~v~ea~~~ai~~~kpG~~ 201 (337)
T 4fuk_A 142 RELEEGDILNIDVSSYL--NGFHGDL------NETVFIGRPDDDSVRLVHAAYECLCAGIGVVKPEAL 201 (337)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEESSSCCHHHHHHHHHHHHHHHHHHTTCSTTCB
T ss_pred ccccCCCEEEEecceeE--CCEEEee------eeeEEeCCccHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 56677899999999988 7766654 4567777532 45778888888888865
No 50
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=52.28 E-value=15 Score=22.07 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.9
Q ss_pred hHHHHHHhcCCCCCcEEEEEEcCC
Q 033929 70 IRAWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 70 ~~g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
..-+-.||.|.++|+.+.+..|..
T Consensus 91 ~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 91 MAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 446889999999999999999875
No 51
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=51.99 E-value=56 Score=22.55 Aligned_cols=51 Identities=20% Similarity=0.136 Sum_probs=37.4
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+++.++..+++|-+
T Consensus 154 ~~L~~GDiv~iD~G~~~--~GY~sD------~tRT~~vG~~~~~~~~l~~~v~~a~~~ai~~~kPG~~ 213 (329)
T 2b3h_A 154 RPLQEGDIVNVDITLYR--NGYHGD------LNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVR 213 (329)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEE------EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred cCCCCCCEEEEEeeEEE--CCEEEe------eEEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 56677899999999988 675555 34567777521 45778888888888864
No 52
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=51.52 E-value=48 Score=21.72 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=36.6
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| ...+|.+|.-. +..+++.++..+++|-+
T Consensus 87 ~~l~~Gd~v~iD~G~~~--~GY~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 146 (262)
T 3mx6_A 87 KPLKNGDIVNIDVTVIL--DGWYGD------TSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAK 146 (262)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEE------EEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCB
T ss_pred cccCCCCEEEEEeeEEE--CCEEEE------EEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 46667899999998887 675555 34567777422 45778888888888854
No 53
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=50.24 E-value=5.6 Score=23.27 Aligned_cols=22 Identities=23% Similarity=0.735 Sum_probs=19.0
Q ss_pred CCchhHHHHHHhcCCCCCcEEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++.+.|++++..|++|+...
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 4579999999999999999754
No 54
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=49.86 E-value=65 Score=22.75 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=36.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcC---CCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELG---KGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g---~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+| .-. +..+++.++..+++|-+
T Consensus 182 r~L~~GDiV~iD~G~~~--~GY~sD------itRT~~vGg~~~~s~e~~~ly~~v~ea~~aai~~ikPG~~ 244 (368)
T 3s6b_A 182 RPLKSGDIINIDISVFY--KGVHSD------LNETYFVGDINDVPKEGKELVETCYFSLMEAIKKCKPGMF 244 (368)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEE------EEEEEECSCGGGSCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred ccccCCCEEEEEEeEEE--CcEEEE------EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 56677899999999988 675555 35667788 211 45678888888888854
No 55
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=47.58 E-value=18 Score=22.28 Aligned_cols=24 Identities=25% Similarity=0.263 Sum_probs=20.7
Q ss_pred hHHHHHHhcCCCCCcEEEEEEcCC
Q 033929 70 IRAWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 70 ~~g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
..-+-.||.|.++|+.+.+..|..
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETTE
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345789999999999999999864
No 56
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=46.39 E-value=63 Score=21.55 Aligned_cols=51 Identities=20% Similarity=0.227 Sum_probs=36.3
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 114 ~~l~~Gd~v~iD~G~~~--~GY~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 173 (286)
T 3tav_A 114 AVLADGDLVSIDCGAIL--DGWHGD------SAWTFAVGTVIPSDEALSEATRLSMEAGIAAMIPGNR 173 (286)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEE------EEEEEESSSCCHHHHHHHHHHHHHHHHHHHTCCTTCB
T ss_pred cccCCCCEEEEEEEEEE--CCEEEe------eEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45667899999998887 675555 34567777421 45677788888888854
No 57
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=45.55 E-value=17 Score=22.16 Aligned_cols=18 Identities=17% Similarity=0.342 Sum_probs=15.3
Q ss_pred HHHHHhcCCCCCcEEEEE
Q 033929 72 AWDIALRSMKVGEVAKLT 89 (108)
Q Consensus 72 g~~~al~~m~~Ge~~~~~ 89 (108)
+-..-|+.|++||++.|.
T Consensus 30 ~arn~lr~Mk~GD~~~fY 47 (147)
T 2p5d_A 30 RYKNTINKVKVGDKLIIY 47 (147)
T ss_dssp GGHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHhCCCCCEEEEE
Confidence 345677899999999999
No 58
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=45.20 E-value=66 Score=21.46 Aligned_cols=51 Identities=22% Similarity=0.199 Sum_probs=36.7
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-|. ..+|.+|.-. +..+++.++..+++|-+
T Consensus 120 ~~l~~Gd~v~iD~G~~~--~GY~sD~------tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 179 (285)
T 3pka_A 120 TVITDGDIVNIDVTAYI--GGVHGDT------NATFPAGDVADEHRLLVDRTREATMRAINTVKPGRA 179 (285)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSB
T ss_pred cccCCCCEEEEEEEEEE--CCEEEEE------EEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 46677899999999887 6765553 4566777422 45778888888888854
No 59
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=45.08 E-value=80 Score=22.40 Aligned_cols=51 Identities=18% Similarity=0.172 Sum_probs=37.3
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCC---Cc-----------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGK---GS-----------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~---~~-----------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.|++-+.. +|-.-|. ..+|.+|. +. +..+++.++..+++|-+
T Consensus 105 ~~L~~GDiV~ID~G~~~--~GY~sD~------tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~ 169 (401)
T 2q8k_A 105 YILKEGDLVKIDLGVHV--DGFIANV------AHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQ 169 (401)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCB
T ss_pred cccCCCCEEEEEEEEEE--CCEEEEE------EEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45667899999999887 7766664 56678882 11 35678888888888865
No 60
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=44.72 E-value=63 Score=21.10 Aligned_cols=51 Identities=25% Similarity=0.178 Sum_probs=36.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-|. ..+|.+|.-. +..+.+.++..+++|-+
T Consensus 85 ~~l~~gd~v~iD~G~~~--~gy~sD~------tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 144 (263)
T 2gg2_A 85 KLLKDGDIVNIDVTVIK--DGFHGDT------SKMFIVGKPTIMGERLCRITQESLYLALRMVKPGIN 144 (263)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCB
T ss_pred cCcCCCCEEEEEEEEEE--CCEEEEE------EEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45667899999999887 6755553 4566777421 45678888888888843
No 61
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=44.43 E-value=17 Score=20.38 Aligned_cols=22 Identities=18% Similarity=0.241 Sum_probs=18.9
Q ss_pred CCchhHHHHHHhcCCCCCcEEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++.+.|++++..|++|+...
T Consensus 65 ~~~l~~~f~~a~~~l~~G~is~ 86 (103)
T 2pv1_A 65 IQELPGIFAQALSTAKKGDIVG 86 (103)
T ss_dssp GGGSCHHHHHHTTTCCTTCEEE
T ss_pred hhhcCHHHHHHHHcCCCCCeec
Confidence 3568899999999999999765
No 62
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=43.39 E-value=15 Score=22.19 Aligned_cols=24 Identities=13% Similarity=0.073 Sum_probs=20.4
Q ss_pred hHHHHHHhcCCCCCcEEEEEEcCC
Q 033929 70 IRAWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 70 ~~g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
..-+-.||.|.++|+.+.+..|..
T Consensus 94 ~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 94 LAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345779999999999999998865
No 63
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=41.78 E-value=13 Score=20.39 Aligned_cols=21 Identities=29% Similarity=0.301 Sum_probs=18.4
Q ss_pred CchhHHHHHHhcCCCCCcEEE
Q 033929 67 GSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 67 ~~~~~g~~~al~~m~~Ge~~~ 87 (108)
+++.+.|++++..|++|+...
T Consensus 55 ~~l~~~f~~a~~~l~~G~is~ 75 (92)
T 1jns_A 55 GQMVPAFDKVVFSCPVLEPTG 75 (92)
T ss_dssp TSSCHHHHHHHHHSCTTCCEE
T ss_pred cccCHHHHHHHHhCCCCCcCC
Confidence 468899999999999999764
No 64
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=40.55 E-value=75 Score=20.79 Aligned_cols=51 Identities=16% Similarity=0.201 Sum_probs=36.6
Q ss_pred CC-CCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SP-TEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p-~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++ .+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+++.++..+++|-+
T Consensus 95 ~~~l~~Gd~v~iD~G~~~--~GY~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~i~~~kpG~~ 155 (262)
T 1o0x_A 95 EKVFKEGDIVSVDVGAVY--QGLYGD------AAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIR 155 (262)
T ss_dssp TCBCCTTCEEEEEEEEEE--TTEEEE------EEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSB
T ss_pred CcccCCCCEEEEEEEEEE--CCEEEE------EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45 667899999999887 676555 34567777522 45678888888888865
No 65
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=40.15 E-value=19 Score=19.97 Aligned_cols=23 Identities=30% Similarity=0.690 Sum_probs=19.3
Q ss_pred CCCchhHHHHHHhcCCCCCcEEE
Q 033929 65 GKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 65 g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
..+++.+.|++++..|++|+...
T Consensus 60 ~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 60 GRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cCCCCCHHHHHHHHcCCCCCccc
Confidence 35678999999999999998653
No 66
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=39.96 E-value=21 Score=22.01 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=21.4
Q ss_pred hhHHHHHHhcCCCCCcEEEEEEcCC
Q 033929 69 VIRAWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 69 ~~~g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
...-+-.||.|.++|+.+.+..|..
T Consensus 120 ~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 120 IDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp TTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred CCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 4456889999999999999998865
No 67
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=39.15 E-value=18 Score=20.91 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=19.6
Q ss_pred CCCchhHHHHHHhcCCCCCcEEE
Q 033929 65 GKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 65 g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
..+++.+.|++++..|++|+...
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~ 87 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAG 87 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEE
T ss_pred cccccCHHHHHHHHhCCCCCccc
Confidence 34578999999999999999864
No 68
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=38.87 E-value=66 Score=23.64 Aligned_cols=51 Identities=10% Similarity=0.231 Sum_probs=35.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.|++-+.+ +|-.-|.+ .+|.++... +..+++.++..+++|-+
T Consensus 240 r~Lk~GDiV~ID~G~~~--dGY~sD~t------RT~~Vg~e~~~L~eav~eA~~aaI~~~kPG~~ 296 (478)
T 1b6a_A 240 TVLQYDDICKIDFGTHI--SGRIIDCA------FTVTFNPKYDTLLKAVKDATNTGIKCAGIDVR 296 (478)
T ss_dssp CBCCTTCCEEEEEEEEE--TTEEEEEE------EEECSSGGGHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred ccccCCCeEEEEEEEEE--CCEEEEEE------EEEEeCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35667899999999887 78766653 455565322 45677788888888754
No 69
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=35.20 E-value=90 Score=20.12 Aligned_cols=51 Identities=24% Similarity=0.274 Sum_probs=35.7
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCC--C-c-------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGK--G-S-------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~--~-~-------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-|. ..+|.+|. . . +..+++.++..+++|-+
T Consensus 82 ~~l~~gd~v~iD~g~~~--~gy~sD~------tRT~~vG~~~~~~~~~~~~~~~~a~~~~i~~~kpG~~ 142 (252)
T 1qxy_A 82 RVIREGDLVNIDVSALK--NGYYADT------GISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTK 142 (252)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEEEEE------EEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCB
T ss_pred cCcCCCCEEEEEeeEEE--CCEEEEE------EEEEEcCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 46667899999999887 6755553 45566775 2 1 34567778888888864
No 70
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=32.90 E-value=17 Score=22.45 Aligned_cols=24 Identities=8% Similarity=-0.036 Sum_probs=16.8
Q ss_pred hHHHHHHhcCCCCCcEEEEEEcCC
Q 033929 70 IRAWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 70 ~~g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
..-+-.||.|.++|+.+.+.+|..
T Consensus 123 ~SPlG~ALlGk~~GD~v~v~~p~G 146 (158)
T 1grj_A 123 NSPIARGLIGKEEDDVVVIKTPGG 146 (158)
T ss_dssp SSHHHHHHTTCBTTCEECC-----
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345889999999999999998864
No 71
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=32.14 E-value=19 Score=20.62 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=18.7
Q ss_pred CCchhHHHHHHhcCCCCCcEEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++.+.|++++..|++|+...
T Consensus 70 ~~~l~~~f~~a~~~l~~Geis~ 91 (110)
T 4g2p_A 70 PDIFDPAFRDALTKLHKGQISA 91 (110)
T ss_dssp GGGSCHHHHHHHHTCCTTCBCC
T ss_pred ccccCHHHHHHHHcCCCCCcCc
Confidence 4578899999999999998753
No 72
>1dj7_B Ferredoxin thioredoxin reductase: variable chain; 4Fe-4S cluster binding fold with CXCX16CXCX8CXC binding MOTI electron transport; 1.60A {Synechocystis SP} SCOP: b.34.4.3 PDB: 2pu9_B 2pvo_B 2puo_B 2puk_B 2pvd_B 2pvg_B
Probab=31.25 E-value=17 Score=19.77 Aligned_cols=12 Identities=33% Similarity=0.642 Sum_probs=9.7
Q ss_pred CCCCcEEEEEEc
Q 033929 80 MKVGEVAKLTCK 91 (108)
Q Consensus 80 m~~Ge~~~~~ip 91 (108)
|++|+|+++.-|
T Consensus 1 mk~GdrVrV~~s 12 (75)
T 1dj7_B 1 MNVGDRVRVTSS 12 (75)
T ss_dssp CCTTCEEEECSC
T ss_pred CCCCCEEEEccc
Confidence 889999997744
No 73
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=30.91 E-value=54 Score=17.58 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=19.0
Q ss_pred HHHHHhcCCCCCcEEEEEEcCCc
Q 033929 72 AWDIALRSMKVGEVAKLTCKPEY 94 (108)
Q Consensus 72 g~~~al~~m~~Ge~~~~~ip~~~ 94 (108)
-..++|..|+.|+...+.+.-..
T Consensus 26 ~~kkal~~l~~G~~l~V~~dd~~ 48 (82)
T 3lvj_C 26 MVRKTVRNMQPGETLLIIADDPA 48 (82)
T ss_dssp HHHHHHHTSCTTCEEEEEECCTT
T ss_pred HHHHHHHhCCCCCEEEEEECCcc
Confidence 37789999999999999887543
No 74
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=30.63 E-value=1.3e+02 Score=20.52 Aligned_cols=51 Identities=20% Similarity=0.224 Sum_probs=34.9
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 204 ~~l~~gd~v~iD~g~~~--~gy~sD------~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 263 (356)
T 3q6d_A 204 KVIETGDFVTLDFGAYY--KGYCSD------ITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLT 263 (356)
T ss_dssp CBCCTTCEEEEEECEEE--TTEECC------EEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cccCCCCEEEEEEeEEE--CCEEee------eEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45667899999987776 453322 45667777532 45777888888888854
No 75
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=29.84 E-value=24 Score=20.06 Aligned_cols=22 Identities=36% Similarity=0.533 Sum_probs=18.6
Q ss_pred CCchhHHHHHHhcCCCCCcEEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++.+.|++++..|++|+...
T Consensus 75 ~~~l~~~f~~a~~~l~~G~is~ 96 (111)
T 2jzv_A 75 KGQTDKDFEKALFKLKDGEVSE 96 (111)
T ss_dssp TTSSCHHHHHHHHTCCTTCBCC
T ss_pred CCcccHHHHHHHHhCCCCCcCc
Confidence 3568999999999999998643
No 76
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=29.42 E-value=24 Score=21.91 Aligned_cols=23 Identities=17% Similarity=0.489 Sum_probs=19.5
Q ss_pred cCCCchhHHHHHHhcCCCCCcEE
Q 033929 64 LGKGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 64 ~g~~~~~~g~~~al~~m~~Ge~~ 86 (108)
+..+++.+.|++++..|++|+..
T Consensus 128 ~~~~~l~~~f~~a~f~l~~GeiS 150 (166)
T 3tc5_A 128 FSRGQMQKPFEDASFALRTGEMS 150 (166)
T ss_dssp ECTTSSCHHHHHHHHHSCTTCBC
T ss_pred ecccccCHHHHHHHHhCCCCCCc
Confidence 34567999999999999999864
No 77
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=29.17 E-value=32 Score=19.04 Aligned_cols=27 Identities=11% Similarity=0.290 Sum_probs=19.6
Q ss_pred eeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEc
Q 033929 58 TVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCK 91 (108)
Q Consensus 58 ~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip 91 (108)
-...|.+.+... |.++++|++++|.+.
T Consensus 47 MTM~F~v~~~~~-------l~~lk~Gd~V~F~~~ 73 (88)
T 2vb2_X 47 MTMRFTITPQTK-------MSEIKTGDKVAFNFV 73 (88)
T ss_dssp EEEEEECCTTCE-------ECCCCTTCEEEEEEE
T ss_pred eEEEEEcCChhh-------hhcCCCCCEEEEEEE
Confidence 345666654332 689999999999885
No 78
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=29.15 E-value=33 Score=18.62 Aligned_cols=27 Identities=11% Similarity=0.290 Sum_probs=19.7
Q ss_pred eeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEc
Q 033929 58 TVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCK 91 (108)
Q Consensus 58 ~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip 91 (108)
-...|.+.+... |.++++|++++|.+.
T Consensus 39 MTM~F~v~~~~~-------l~~lk~Gd~V~F~~~ 65 (80)
T 2qcp_X 39 MTMRFTITPQTK-------MSEIKTGDKVAFNFV 65 (80)
T ss_dssp EEEEEECCTTCE-------ECCCCTTCEEEEEEE
T ss_pred eEEEEEccChhh-------hhcCCCCCEEEEEEE
Confidence 356676654332 689999999999885
No 79
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=28.47 E-value=26 Score=19.69 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=18.0
Q ss_pred CCchhHHHHHHhcCCCCCcEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~ 86 (108)
.+++.+.|++++..|++|+..
T Consensus 57 ~~~l~~~f~~a~~~l~~G~vs 77 (101)
T 3ui4_A 57 RGSMVGPFQEAAFALPVSGMD 77 (101)
T ss_dssp TTSSCHHHHHHHHTSCCCBTT
T ss_pred CCCCCHHHHHHHHhCCCCCCc
Confidence 357899999999999999864
No 80
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=28.42 E-value=1.5e+02 Score=20.53 Aligned_cols=51 Identities=10% Similarity=-0.016 Sum_probs=34.5
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 237 ~~l~~gd~v~iD~g~~~--~gy~sD------~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 296 (402)
T 1kp0_A 237 RVVZRGDILSLNCFPMI--FGYYTA------LERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKPGAR 296 (402)
T ss_dssp CBCCTTCEEEEEEEEEE--TTEECC------EEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cccCCCCEEEEEEEeeE--CCEeee------cEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 45667899999998877 554333 45566677422 45677777888888764
No 81
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=28.36 E-value=21 Score=19.54 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=18.6
Q ss_pred CCchhHHHHHHhcCCCCCcEEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
.+++.+.|++++..|++|+...
T Consensus 56 ~~~l~~~f~~a~~~l~~G~is~ 77 (93)
T 1zk6_A 56 EGQMDETFSKAAFKLKTGEVSD 77 (93)
T ss_dssp TTSSCTTHHHHHHHSCTTCBCC
T ss_pred cccCCHHHHHHHHcCCCCCccc
Confidence 4578899999999999998643
No 82
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=28.34 E-value=32 Score=21.41 Aligned_cols=23 Identities=30% Similarity=0.498 Sum_probs=19.2
Q ss_pred CCCchhHHHHHHhcCCCCCcEEE
Q 033929 65 GKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 65 g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
..+++.+.|++++..|++|+...
T Consensus 140 ~~~~l~~~f~~a~f~L~~GeiS~ 162 (177)
T 1yw5_A 140 SKGQMQPPFEEAAFNLHVGEVSN 162 (177)
T ss_dssp CTTSSCHHHHHHHHTSCTTCBCC
T ss_pred cccccCHHHHHHHHcCCCCCcCC
Confidence 45678999999999999998643
No 83
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=27.87 E-value=74 Score=17.85 Aligned_cols=22 Identities=23% Similarity=0.200 Sum_probs=18.8
Q ss_pred HHHHHhcCCCCCcEEEEEEcCC
Q 033929 72 AWDIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 72 g~~~al~~m~~Ge~~~~~ip~~ 93 (108)
-..++|..|+.|+...+.+.-.
T Consensus 43 ktkkaL~~l~~Ge~L~Vl~dd~ 64 (97)
T 1je3_A 43 ATLEAMPQLKKGEILEVVSDCP 64 (97)
T ss_dssp HHHHHTTTCCSSCEEEEEEBCS
T ss_pred HHHHHHHcCCCCCEEEEEECCc
Confidence 5778999999999999988754
No 84
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=26.82 E-value=23 Score=20.90 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=18.2
Q ss_pred CCchhHHHHHHhcCCCCCcEE
Q 033929 66 KGSVIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 66 ~~~~~~g~~~al~~m~~Ge~~ 86 (108)
.+++.+.|++++..|++|+..
T Consensus 87 ~~~l~~~f~~a~f~l~~GeiS 107 (123)
T 3i6c_A 87 RGQMQKPFEDASFALRTGEMS 107 (123)
T ss_dssp TTTSCHHHHHHHHHSCTTCBC
T ss_pred CCCCCHHHHHHHHhCCCCCcc
Confidence 357899999999999999864
No 85
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=26.81 E-value=57 Score=19.74 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=17.0
Q ss_pred HHHhcCCCCCcEEEEEEcCC
Q 033929 74 DIALRSMKVGEVAKLTCKPE 93 (108)
Q Consensus 74 ~~al~~m~~Ge~~~~~ip~~ 93 (108)
...|..|++||++.|..+..
T Consensus 29 rn~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHHHTTCCTTCEEEEEECCE
T ss_pred HHHHHhCCCCCEEEEEEccc
Confidence 35778999999999998865
No 86
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=26.56 E-value=69 Score=17.98 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=19.0
Q ss_pred HHHHHhcCCCCCcEEEEEEcCCc
Q 033929 72 AWDIALRSMKVGEVAKLTCKPEY 94 (108)
Q Consensus 72 g~~~al~~m~~Ge~~~~~ip~~~ 94 (108)
-..++|..|..|+..++.+.-..
T Consensus 42 ~tkkaL~~l~~Ge~L~Vl~dd~~ 64 (98)
T 1jdq_A 42 ETKRALQNMKPGEILEVWIDYPM 64 (98)
T ss_dssp HHHHHHHTCCTTCEEEEEESSCT
T ss_pred HHHHHHHhCCCCCEEEEEECCcc
Confidence 46789999999999999986543
No 87
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=25.98 E-value=43 Score=18.27 Aligned_cols=28 Identities=11% Similarity=0.279 Sum_probs=19.9
Q ss_pred eeEEEEcCCCchhHHHHHHhcCCCCCcEEEEEEcC
Q 033929 58 TVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKP 92 (108)
Q Consensus 58 ~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~~ip~ 92 (108)
-.+.|.+.+..+ |.++++|++++|.+.-
T Consensus 33 MTM~F~v~~~~~-------l~~lk~Gd~V~F~~~~ 60 (82)
T 2l55_A 33 MTMEFAAPPAGL-------PQGLKAGDRVAFSFRL 60 (82)
T ss_dssp EEEEEECCTTCC-------CSSCSTTCEEEEEEEE
T ss_pred eEEEEEcCChhH-------hhcCCCCCEEEEEEEE
Confidence 356666654332 6899999999998854
No 88
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=25.36 E-value=28 Score=20.86 Aligned_cols=24 Identities=25% Similarity=0.670 Sum_probs=19.5
Q ss_pred cCCCchhHHHHHHhcCCCCCcEEE
Q 033929 64 LGKGSVIRAWDIALRSMKVGEVAK 87 (108)
Q Consensus 64 ~g~~~~~~g~~~al~~m~~Ge~~~ 87 (108)
+..+++.+.|++++..|++|+...
T Consensus 101 ~~~~~l~~~f~~a~~~l~~GeiS~ 124 (139)
T 1j6y_A 101 FGRGQMQKPFEEATYALKVGDISD 124 (139)
T ss_dssp CSSSSSCTHHHHHHHHCCSSSCCS
T ss_pred ecccccCHHHHHHHHcCCCCCccc
Confidence 345678999999999999998643
No 89
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=25.20 E-value=1.7e+02 Score=20.07 Aligned_cols=51 Identities=18% Similarity=0.207 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 204 ~~l~~gd~v~iD~g~~~--~gy~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 263 (356)
T 1wn1_A 204 RKIRKGDIIILDYGARW--KGYCSD------ITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIK 263 (356)
T ss_dssp CBCCTTCEEEEEECEEE--TTEECC------EEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBTTSB
T ss_pred CeecCCCEEEEEEEEEE--CCEEec------cEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45667899999998877 453333 45677777522 45677778888888864
No 90
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=25.17 E-value=1.4e+02 Score=22.25 Aligned_cols=67 Identities=13% Similarity=0.188 Sum_probs=40.5
Q ss_pred CCCCEEEEEEEcCCCCCCCCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCCCCcEEEE
Q 033929 9 GDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKL 88 (108)
Q Consensus 9 ~~~gi~~~il~~G~g~~~~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~~Ge~~~~ 88 (108)
...|++..-+.+|+... +..+.||.++ .. ||+.+.+. ..+.+...+ ...|...|...++|+++.+
T Consensus 275 ~~~Gv~V~~V~~~spA~-~al~~GDvI~-----~i--dg~~V~~~----g~~~~~~~~---~~~l~~~v~~~~~Gd~v~l 339 (539)
T 4fln_A 275 TNEGVLVRRVEPTSDAS-KVLKEGDVIV-----SF--DDLHVGCE----GTVPFRSSE---RIAFRYLISQKFAGDIAEI 339 (539)
T ss_dssp SSBCEEEEEECTTSGGG-GTCCTTCEEE-----EE--TTEECBSS----SEEECSTTC---EEETHHHHHTSCTTCEEEE
T ss_pred CcCceeeecccCCChHH-hCccCCCEEE-----EE--CCEEeCcC----Ceeccccch---hHHHHHHHHcCCCCCEEEE
Confidence 45789888888888654 3477788763 23 77777653 122221111 1135566777788888776
Q ss_pred EE
Q 033929 89 TC 90 (108)
Q Consensus 89 ~i 90 (108)
.|
T Consensus 340 ~v 341 (539)
T 4fln_A 340 GI 341 (539)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 91
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=24.66 E-value=1.7e+02 Score=19.86 Aligned_cols=51 Identities=20% Similarity=0.238 Sum_probs=34.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 207 ~~l~~gd~v~iD~g~~~--~gy~~D------~tRt~~~G~~~~~~~~~~~~v~~~~~~~~~~~~pG~~ 266 (359)
T 2zsg_A 207 KVVERGDVIVIDFGATY--ENYCAD------ITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVT 266 (359)
T ss_dssp CBCCTTCEEEEEECEEE--TTEECC------EEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cccCCCCEEEEEEeEEE--CCEEEe------eeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 45666899999998877 553222 45677777422 45677778888888864
No 92
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=23.90 E-value=1.8e+02 Score=19.90 Aligned_cols=51 Identities=22% Similarity=0.124 Sum_probs=34.7
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 201 ~~l~~gd~v~iD~G~~~--~gy~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 260 (351)
T 1wy2_A 201 KRIERGDLVVIDLGALY--QHYNSD------ITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGIT 260 (351)
T ss_dssp CBCCTTCEEEEEECEEE--TTEECC------EEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred cccCCCCEEEEEEEEEE--CCEEec------ceEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 45666899999988876 453322 45667777522 45677788888888854
No 93
>1cmx_A Protein (ubiquitin YUH1-UBAL); ubiquitin hydrolase, deubiquitinating enzyme, cysteine protease, enzyme specificity; 2.25A {Synthetic} SCOP: d.3.1.6
Probab=23.25 E-value=69 Score=21.24 Aligned_cols=24 Identities=25% Similarity=0.577 Sum_probs=17.9
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEe
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFD 51 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~ 51 (108)
.|... +.+.+||.++...+|.+++
T Consensus 156 ~p~~~-~~~~~HFI~fV~~~G~LyE 179 (235)
T 1cmx_A 156 APEAT-ADTNLHYITYVEENGGIFE 179 (235)
T ss_dssp CCCTT-SCCSEEEEEEEECSSEEEE
T ss_pred CCCCC-CCCCeEEEEEEeeCCEEEE
Confidence 34444 6789999999887888765
No 94
>1xd3_A Ubiquitin carboxyl-terminal esterase L3; enzyme-ligand complex, active site crossover loop, hydrolase; HET: GVE; 1.45A {Homo sapiens} SCOP: d.3.1.6 PDB: 1uch_A*
Probab=21.84 E-value=68 Score=21.11 Aligned_cols=24 Identities=25% Similarity=0.584 Sum_probs=17.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEe
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFD 51 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~ 51 (108)
.|... +.+.+||.++...+|.+++
T Consensus 159 ~p~~~-~~~~~HFI~fV~~~G~LyE 182 (230)
T 1xd3_A 159 APSID-EKVDLHFIALVHVDGHLYE 182 (230)
T ss_dssp CCCTT-SCCCEEEEEEEEETTEEEE
T ss_pred CCCCC-CCcCeEEEEEEeeCCEEEE
Confidence 34444 6789999999876888765
No 95
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=21.19 E-value=2.1e+02 Score=19.84 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcEE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEVA 86 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~~ 86 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+.
T Consensus 237 ~~l~~gd~v~iD~G~~~--~gY~sD------~tRT~~~G~~~~~~~~~y~~v~~a~~~~i~~~~pG~~~ 297 (401)
T 1chm_A 237 RKVNKGDILSLNCFPMI--AGYYTA------LERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARC 297 (401)
T ss_dssp CBCCTTCEEEEEEECEE--TTEECC------EEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBH
T ss_pred CccCCCCEEEEEEEEee--CCEeec------ceEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 45667899999997766 553322 45666677522 456777788888887653
No 96
>3chb_D Cholera toxin; toxin/receptor complex, pentasaccharide; HET: GAL NGA SIA BGC MES; 1.25A {Vibrio cholerae} SCOP: b.40.2.1 PDB: 2chb_D* 1jr0_D* 1fgb_D 1eei_D* 1llr_D* 1md2_D* 1pzj_D* 1pzk_D* 1rcv_D* 1rd9_D* 1rdp_D* 1rf2_D* 1s5b_D 1s5c_D 1s5d_D* 1s5e_D* 1s5f_D* 1chp_D 1chq_D 1ct1_D* ...
Probab=21.10 E-value=1.2e+02 Score=16.84 Aligned_cols=44 Identities=27% Similarity=0.311 Sum_probs=23.6
Q ss_pred EEEEEEcCCCcEEeccCCCCeeEEEEcCCCchhHHHHHHhcCCC
Q 033929 38 HYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMK 81 (108)
Q Consensus 38 ~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~~~~g~~~al~~m~ 81 (108)
.|+-.+....+.+--++..+..|++.+...+.+..-..+|..||
T Consensus 27 syteslagkremviisf~ngatfqvevpgsqh~~sqk~~~ermk 70 (104)
T 3chb_D 27 SYTESLAGKREMAIITFKNGATFQVEVPGSQHIDSQKKAIERMK 70 (104)
T ss_dssp EEEEECSTTCCEEEEECTTCCEEEECCCCTTSCHHHHHHHHHHH
T ss_pred HHHHhhcCceeEEEEEecCCcEEEEecCcchhhhhhhhHHHHHH
Confidence 34444432233444455556667776666666655555555544
No 97
>2jk8_A BEPA, putative cell filamentation protein (BEPA protein; T4SS, OB fold, FIC domain, substrate protein, protein transl cell adhesion; 2.80A {Bartonella henselae} PDB: 2vy3_A 2vza_A*
Probab=20.98 E-value=1.8e+02 Score=19.72 Aligned_cols=17 Identities=24% Similarity=0.344 Sum_probs=15.6
Q ss_pred HHhcCCCCCcEEEEEEc
Q 033929 75 IALRSMKVGEVAKLTCK 91 (108)
Q Consensus 75 ~al~~m~~Ge~~~~~ip 91 (108)
+-|+.++.|+++.|++|
T Consensus 285 e~~~~l~~~~~~~~~~~ 301 (302)
T 2jk8_A 285 EQLKILKPGDKITFTAP 301 (302)
T ss_dssp HHHHTCCTTCEEEEECC
T ss_pred HHHhccCCCCEEEEEeC
Confidence 78899999999999987
No 98
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=20.80 E-value=2.2e+02 Score=19.76 Aligned_cols=52 Identities=21% Similarity=0.265 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+... +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 223 ~~l~~Gd~v~iD~G~~~~-~GY~sD------~tRT~~vG~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 283 (378)
T 4ege_A 223 RKLQVGDIVVVDIGGTYE-PGYYSD------STRTYSIGDPSPDVAQQYSALQRAQRAAVDAVRPGVT 283 (378)
T ss_dssp CBCCTTCEEEEEEEEEET-TTEECC------EEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCB
T ss_pred CCcCCCCEEEEEEEEEEC-CeEEEc------cEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 456678999999887763 453322 45667777522 45677788888888864
No 99
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=20.67 E-value=2.1e+02 Score=19.58 Aligned_cols=51 Identities=20% Similarity=0.159 Sum_probs=34.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCcEEeccCCCCeeEEEEcCCCc---------hhHHHHHHhcCCCCCcE
Q 033929 27 SPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGS---------VIRAWDIALRSMKVGEV 85 (108)
Q Consensus 27 ~p~~~gd~V~v~y~~~~~~~g~~~~st~~~~~~~~~~~g~~~---------~~~g~~~al~~m~~Ge~ 85 (108)
++.+.||.|.+++-+.. +|-.-| -..+|.+|.-. +..+.+.++..+++|-+
T Consensus 225 ~~l~~gd~v~iD~g~~~--~gy~sD------~tRT~~~G~~~~~~~~~~~~v~~a~~~~~~~~~pG~~ 284 (377)
T 4fkc_A 225 RKIRKGDVVIFDYGAKY--LGYCSD------VTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAEGIP 284 (377)
T ss_dssp CBCCTTCEEEEEECEEE--TTEECC------EEEEEESSSCCTHHHHHHHHHHHHHHHHHHHCBTTCB
T ss_pred ccccccccccccccccc--cCcccc------cceeEEEecCCHHHHHhhhhhHHHHHHHHHhhcCCcc
Confidence 45666899999988776 453322 44566777432 45677778888888854
No 100
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=20.09 E-value=99 Score=21.56 Aligned_cols=25 Identities=20% Similarity=0.126 Sum_probs=21.5
Q ss_pred hHHHHHHhcCCCCCcEEEEEEcCCc
Q 033929 70 IRAWDIALRSMKVGEVAKLTCKPEY 94 (108)
Q Consensus 70 ~~g~~~al~~m~~Ge~~~~~ip~~~ 94 (108)
+..+.+++..|+.|++.++..++.-
T Consensus 335 ~~~~~~~~~~~~~g~~~~v~~~~~~ 359 (373)
T 1okg_A 335 DAEVQSAATHLHAGEAATVYFKSGR 359 (373)
T ss_dssp CHHHHHHHTTCBTTCEEEEEETTSC
T ss_pred HHHHHHHHHhcCCCCcEEEEEccCc
Confidence 4579999999999999999988753
Done!