BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033931
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T029|RS254_ARATH 40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2
SV=1
Length = 108
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/108 (89%), Positives = 106/108 (98%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108
ITPSILSDR+RINGSLARRAI++LMA+G IRM++AH+SQQIYTRATNT
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
>sp|Q8GYL5|RS253_ARATH 40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3
SV=2
Length = 108
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/107 (91%), Positives = 106/107 (99%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATN 107
ITPSILSDRLRINGSLARRAI++LMA+G+IRM+SAH+SQQIYTRAT+
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
>sp|Q9SIK2|RS252_ARATH 40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2
SV=1
Length = 108
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/108 (89%), Positives = 105/108 (97%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108
ITPSILSDR+RINGSLARRAI++LMA+G IRM+SAH+SQQIYTRATNT
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
>sp|P46301|RS25_SOLLC 40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3
SV=1
Length = 108
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/108 (89%), Positives = 107/108 (99%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKK +APPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD++TYDKLLSEAPK+KL
Sbjct: 1 MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATNT 108
ITPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+SAHASQQIYTRATNT
Sbjct: 61 ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
>sp|Q9SIW5|RS251_ARATH 40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3
SV=3
Length = 109
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 102/106 (96%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKKDK PPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKL+SEAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
ITPSILSDRLRINGSLAR+AI+DLM +G+IRM+S H+SQQI TRAT
Sbjct: 61 ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106
>sp|Q94G66|RS25_AMACR 40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25 PE=3 SV=1
Length = 114
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 97/107 (90%), Gaps = 1/107 (0%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
MAPKKDKAPPP+SKPAKS GGKQKKKKWSKGKQKEKVNN+VLFD AT+DKLLSEA K K+
Sbjct: 1 MAPKKDKAPPPSSKPAKS-GGKQKKKKWSKGKQKEKVNNLVLFDNATFDKLLSEAGKQKV 59
Query: 61 ITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRATN 107
+T + LS+R RINGSLARRAI++L++RG+I+M+ H+S QIYTR+TN
Sbjct: 60 VTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
>sp|Q03409|RS25_DICDI 40S ribosomal protein S25 OS=Dictyostelium discoideum GN=rps25 PE=3
SV=1
Length = 110
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 4 KKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLITP 63
K+ +A A+K + G G+ KKWSKG+ +EK+NN +LFD+ TY KLL E P K+IT
Sbjct: 11 KQIQASKAAAKGSSGGAGR---KKWSKGRSREKLNNAILFDKETYAKLLKEMPTAKVITT 67
Query: 64 SILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRA 105
+++S+R++ NGSLARRAIK+L+++G I+ I +YT+A
Sbjct: 68 AVVSERMKCNGSLARRAIKELLSKGLIKQIIKGHGNGVYTKA 109
>sp|Q8ISN9|RS25_BRABE 40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2
SV=1
Length = 123
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 84/109 (77%), Gaps = 3/109 (2%)
Query: 1 MAPKKD---KAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK 57
M PKKD + A SGGGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E P
Sbjct: 1 MPPKKDTKGDSKKGQKAKAGSGGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKEVPS 60
Query: 58 FKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
+KLITPS++S+RL+I GSLAR A+K+L ++G I+++S H++Q IYTRAT
Sbjct: 61 YKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRAT 109
>sp|Q9N9V4|RS25_LEIIN 40S ribosomal protein S25 OS=Leishmania infantum GN=RPS25 PE=2 SV=1
Length = 120
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 16 AKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGS 75
A + G K+ KKWSKG+ +E + N V+FD+ TYDKL SE PK+KLITPSI+SDRL+I S
Sbjct: 15 AANKGAKKTTKKWSKGQSREALQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVS 74
Query: 76 LARRAIKDLMARGSIRMISAHASQQIYTR 104
+A +K L IR++S + ++YTR
Sbjct: 75 IAAAGLKQLCREKLIRLVSCSSKTRVYTR 103
>sp|Q6PBI5|RS25_DANRE 40S ribosomal protein S25 OS=Danio rerio GN=rps25 PE=2 SV=1
Length = 124
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPASK------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSE 54
M PK K A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E
Sbjct: 1 MPPKDSKQKKDAGKSKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKE 60
Query: 55 APKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
P +KLITP+++S+RL+I GSLAR A+++L+ +G I+++S H +Q IYTR T
Sbjct: 61 VPNYKLITPAVVSERLKIRGSLARAALQELLGKGLIKLVSKHRAQVIYTRNT 112
>sp|P52821|RS25_CAEEL 40S ribosomal protein S25 OS=Caenorhabditis elegans GN=rps-25 PE=3
SV=1
Length = 117
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 34 KEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMI 93
++K+NNMVLFDQATYDKL E +KLITPS++S+RL++ SLA+ +K+L A+G ++ +
Sbjct: 37 RDKLNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCV 96
Query: 94 SAHASQQIYTRAT 106
H Q +YTRAT
Sbjct: 97 VHHHGQVVYTRAT 109
>sp|Q6Q311|RS25_SHEEP 40S ribosomal protein S25 OS=Ovis aries GN=RPS25 PE=2 SV=1
Length = 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPASK-------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62853|RS25_RAT 40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1
Length = 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPASK-------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62852|RS25_MOUSE 40S ribosomal protein S25 OS=Mus musculus GN=Rps25 PE=2 SV=1
Length = 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPASK-------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62851|RS25_HUMAN 40S ribosomal protein S25 OS=Homo sapiens GN=RPS25 PE=1 SV=1
Length = 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPASK-------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|Q56JX5|RS25_BOVIN 40S ribosomal protein S25 OS=Bos taurus GN=RPS25 PE=2 SV=1
Length = 125
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPASK-------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK A K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
E P +KLITP+++S+RL+I GSLAR A+++L+++G I+++S H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P48588|RS25_DROME 40S ribosomal protein S25 OS=Drosophila melanogaster GN=RpS25 PE=1
SV=3
Length = 117
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQ------KEKVNNMVLFDQATYDKLLSE 54
M PKKD + +K K+ ++K+NN VLFD+ATY+KL E
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 55 APKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
P +KLITPS++S+RL+I GSLA+RA+ +L +G I+ + H SQ IYTRAT
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRAT 112
>sp|Q962Q5|RS25_SPOFR 40S ribosomal protein S25 OS=Spodoptera frugiperda GN=RpS25 PE=3
SV=1
Length = 119
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPASKPAKSGGGKQKKKKWSKGKQ------KEKVNNMVLFDQATYDKLLSE 54
M PKKD + +K K+ ++K+NN VLFD+ TY+KL E
Sbjct: 1 MPPKKDTKASAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKPTYEKLYKE 60
Query: 55 APKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
P++KLITP+++S+RL++ GSLARRA+ +L +G I+ + H Q IYTRAT
Sbjct: 61 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 112
>sp|Q90YP9|RS25_ICTPU 40S ribosomal protein S25 OS=Ictalurus punctatus GN=rps25 PE=2 SV=1
Length = 124
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPASK------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSE 54
M PK K SK P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E
Sbjct: 1 MPPKDSKQKKDTSKAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKE 60
Query: 55 APKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIYTRAT 106
P +KLITP+++S+RL+I GSLAR A+ +L+++G I+++S H +Q IYTR T
Sbjct: 61 VPNYKLITPAVVSERLKIRGSLARAALLELLSKGMIKLVSKHRAQVIYTRNT 112
>sp|O74172|RS25B_SCHPO 40S ribosomal protein S25-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps25b PE=3 SV=1
Length = 88
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMIS 94
+K + +FD++ D++ E P FK I+ S+L DR++INGSLAR AI+DL RG I+ +
Sbjct: 14 DKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVD 73
Query: 95 AHASQQIYTRA 105
H+ Q IYTRA
Sbjct: 74 QHSKQAIYTRA 84
>sp|P79009|RS25A_SCHPO 40S ribosomal protein S25-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps25a PE=3 SV=2
Length = 89
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMIS 94
+K + +FD++ D++ E P FK I+ S+L DR++INGSLAR AI+DL RG I+ +
Sbjct: 14 DKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVD 73
Query: 95 AHASQQIYTRA 105
H+ Q IYTR
Sbjct: 74 QHSKQAIYTRV 84
>sp|Q3E792|RS25A_YEAST 40S ribosomal protein S25-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS25A PE=1 SV=1
Length = 108
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMIS 94
++ + V+ DQ YD++L E P ++ ++ S+L DRL+I GSLAR A++ L G I+ IS
Sbjct: 34 DRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPIS 93
Query: 95 AHASQQIYTRAT 106
H+ Q IYTRAT
Sbjct: 94 KHSKQAIYTRAT 105
>sp|Q7SC06|RS25_NEUCR 40S ribosomal protein S25 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-25
PE=3 SV=1
Length = 97
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 15 PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRING 74
PA SG K++KKKWSKGK K+K + V+ D++T DKL + ++L+T + L DRL+ING
Sbjct: 3 PAASGA-KKQKKKWSKGKVKDKAQHAVILDKSTSDKLYKDVQSYRLVTVATLVDRLKING 61
Query: 75 SLARRAIKDLMARGSIRMISAHASQQIYTRA 105
SLARR +KDL +G I+ + H+ +IYTRA
Sbjct: 62 SLARRCLKDLEEKGQIKQVVGHSKMKIYTRA 92
>sp|P0C0T4|RS25B_YEAST 40S ribosomal protein S25-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS25B PE=1 SV=1
Length = 108
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMIS 94
++ + V+ DQ YD++L E P ++ ++ S+L DRL+I GSLAR A++ L G I+ IS
Sbjct: 34 DRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPIS 93
Query: 95 AHASQQIYTRA 105
H+ Q IYTRA
Sbjct: 94 KHSKQAIYTRA 104
>sp|Q6FPX5|RS25_CANGA 40S ribosomal protein S25 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS25
PE=3 SV=1
Length = 107
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 38 NNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHA 97
+ V+ DQ +D++L E P ++ ++ S+L DRL+I GS+AR A++ L G I+ IS H+
Sbjct: 37 QHAVILDQEKFDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLEREGIIKPISKHS 96
Query: 98 SQQIYTRAT 106
Q IYTRA+
Sbjct: 97 KQAIYTRAS 105
>sp|Q75DJ1|RS25_ASHGO 40S ribosomal protein S25 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS25 PE=3 SV=1
Length = 108
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 38 NNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHA 97
+ V+ DQ D++L E P ++ ++ S+L DRL+I GS+AR A++ L G I+ IS H+
Sbjct: 37 QHAVILDQDKLDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLETEGIIKPISKHS 96
Query: 98 SQQIYTRAT 106
Q IYTRAT
Sbjct: 97 KQAIYTRAT 105
>sp|Q97ZZ6|RS25_SULSO 30S ribosomal protein S25e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps25e PE=3 SV=1
Length = 110
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 34 KEKVNNMVLFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMI 93
KE ++ V D+ T K+L E K +ITP L+ + I+ S+AR+ +K+L + +++
Sbjct: 38 KEIISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISVARKILKELENQNVVKLY 97
Query: 94 SAHASQQIYTRAT 106
S + +IY A+
Sbjct: 98 SKNRRLEIYIAAS 110
>sp|Q8STD9|RS25_ENCCU 40S ribosomal protein S25 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS25-1 PE=3 SV=1
Length = 109
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 3 PKKDKAPPPASKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKLIT 62
K+ KA AS G ++ KKKW G++KE+V V + K+ + + ++T
Sbjct: 8 SKEKKALKAAS------GTRKDKKKWGDGRKKEEVRRAVTVSEELLAKVRKDVGRASVVT 61
Query: 63 PSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQIY 102
++ R +N +A ++ L G ++ + + IY
Sbjct: 62 RYMIGSRYNLNLGVAENVLRHLSNEGVVQQVLGNRRMTIY 101
>sp|Q8ZVP1|RS25_PYRAE 30S ribosomal protein S25e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps25e PE=3 SV=1
Length = 110
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 33/64 (51%)
Query: 42 LFDQATYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIKDLMARGSIRMISAHASQQI 101
+ D+ + + E ++ITP ++ + I S+A + +++L RG + +++ +I
Sbjct: 44 VLDEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRTEI 103
Query: 102 YTRA 105
Y A
Sbjct: 104 YVPA 107
>sp|Q6NUQ4|TM214_HUMAN Transmembrane protein 214 OS=Homo sapiens GN=TMEM214 PE=1 SV=2
Length = 689
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 5 KDKAPPPASKPAKSGGGKQKKKKWSKGKQKEK 36
K++ PPPA +P K G KQ KK + Q +K
Sbjct: 73 KEQVPPPAVEPKKPGNKKQPKKVATPPNQNQK 104
>sp|A4FV45|TM214_BOVIN Transmembrane protein 214 OS=Bos taurus GN=TMEM214 PE=2 SV=1
Length = 687
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 5 KDKAPPPASKPAKSGGGKQKKKKWSKGKQKEK 36
K++ PPPA +P K G KQ KK + Q +K
Sbjct: 71 KEQVPPPAVEPKKPGNKKQAKKVATLTNQNQK 102
>sp|P31399|ATP5H_RAT ATP synthase subunit d, mitochondrial OS=Rattus norvegicus GN=Atp5h
PE=1 SV=3
Length = 161
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 32 KQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
KQ EK+ NM+ FDQ T D L P+ KL
Sbjct: 117 KQLEKIKNMIPFDQMTIDDLNEVFPETKL 145
>sp|Q9Y914|RS25_AERPE 30S ribosomal protein S25e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps25e
PE=3 SV=1
Length = 103
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 19 GGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKF----KLITPSILSDRLRING 74
GG KKK K+ EK +KL+ +A K + +TP L+ ++ +
Sbjct: 2 GGEDMAKKKAPSAKEGEKQQGFKEIIPEVTEKLVEQARKEVARERWVTPHKLAQKMGVKV 61
Query: 75 SLARRAIKDLMARGSIRMISAHASQQIY 102
S+ARR ++ L G + + + + +Y
Sbjct: 62 SIARRVLRILEEEGVLVLFTRNRRSPLY 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,397,013
Number of Sequences: 539616
Number of extensions: 1415292
Number of successful extensions: 5813
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5684
Number of HSP's gapped (non-prelim): 127
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)