BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033932
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIK2|RS252_ARATH 40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2
SV=1
Length = 108
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/108 (92%), Positives = 106/108 (98%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+EAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 108
ITPSILSDR+RINGSLAR+AIRELMA+GLIRMVSAH+SQQIYTRATNT
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
>sp|Q9T029|RS254_ARATH 40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2
SV=1
Length = 108
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/108 (91%), Positives = 107/108 (99%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+EAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 108
ITPSILSDR+RINGSLAR+AIRELMA+G+IRMV+AH+SQQIYTRATNT
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
>sp|Q8GYL5|RS253_ARATH 40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3
SV=2
Length = 108
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/107 (93%), Positives = 105/107 (98%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 107
ITPSILSDRLRINGSLAR+AIRELMA+G IRMVSAH+SQQIYTRAT+
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
>sp|P46301|RS25_SOLLC 40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3
SV=1
Length = 108
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/108 (92%), Positives = 106/108 (98%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD++TYDKLLSEAPKYKL
Sbjct: 1 MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATNT 108
ITPS+LSDRLRI+GSLARKAIR+LMARG IRMVSAHASQQIYTRATNT
Sbjct: 61 ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
>sp|Q9SIW5|RS251_ARATH 40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3
SV=3
Length = 109
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 101/106 (95%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKL+SEAPK+KL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
ITPSILSDRLRINGSLARKAIR+LM +G IRMVS H+SQQI TRAT
Sbjct: 61 ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106
>sp|Q94G66|RS25_AMACR 40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25 PE=3 SV=1
Length = 114
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 96/107 (89%), Gaps = 1/107 (0%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
MAPKKDKAPPPSSKPAKS GGKQKKKKWSKGKQKEKVNN+VLFD AT+DKLLSEA K K+
Sbjct: 1 MAPKKDKAPPPSSKPAKS-GGKQKKKKWSKGKQKEKVNNLVLFDNATFDKLLSEAGKQKV 59
Query: 61 ITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRATN 107
+T + LS+R RINGSLAR+AIREL++RG I+MV H+S QIYTR+TN
Sbjct: 60 VTAATLSERFRINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
>sp|Q8ISN9|RS25_BRABE 40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2
SV=1
Length = 123
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 85/109 (77%), Gaps = 3/109 (2%)
Query: 1 MAPKKD---KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPK 57
M PKKD + A SGGGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E P
Sbjct: 1 MPPKKDTKGDSKKGQKAKAGSGGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKEVPS 60
Query: 58 YKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
YKLITPS++S+RL+I GSLAR A++EL ++G+I++VS H++Q IYTRAT
Sbjct: 61 YKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRAT 109
>sp|Q9N9V4|RS25_LEIIN 40S ribosomal protein S25 OS=Leishmania infantum GN=RPS25 PE=2 SV=1
Length = 120
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 64/89 (71%)
Query: 16 AKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGS 75
A + G K+ KKWSKG+ +E + N V+FD+ TYDKL SE PKYKLITPSI+SDRL+I S
Sbjct: 15 AANKGAKKTTKKWSKGQSREALQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVS 74
Query: 76 LARKAIRELMARGLIRMVSAHASQQIYTR 104
+A +++L LIR+VS + ++YTR
Sbjct: 75 IAAAGLKQLCREKLIRLVSCSSKTRVYTR 103
>sp|Q03409|RS25_DICDI 40S ribosomal protein S25 OS=Dictyostelium discoideum GN=rps25 PE=3
SV=1
Length = 110
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 70/104 (67%)
Query: 2 APKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLI 61
A K K S AK G +KKWSKG+ +EK+NN +LFD+ TY KLL E P K+I
Sbjct: 6 AGGKSKQIQASKAAAKGSSGGAGRKKWSKGRSREKLNNAILFDKETYAKLLKEMPTAKVI 65
Query: 62 TPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRA 105
T +++S+R++ NGSLAR+AI+EL+++GLI+ + +YT+A
Sbjct: 66 TTAVVSERMKCNGSLARRAIKELLSKGLIKQIIKGHGNGVYTKA 109
>sp|Q6PBI5|RS25_DANRE 40S ribosomal protein S25 OS=Danio rerio GN=rps25 PE=2 SV=1
Length = 124
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 4 KKDKAPPPSSK-PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLIT 62
KKD K P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E P YKLIT
Sbjct: 9 KKDAGKSKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKEVPNYKLIT 68
Query: 63 PSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
P+++S+RL+I GSLAR A++EL+ +GLI++VS H +Q IYTR T
Sbjct: 69 PAVVSERLKIRGSLARAALQELLGKGLIKLVSKHRAQVIYTRNT 112
>sp|P52821|RS25_CAEEL 40S ribosomal protein S25 OS=Caenorhabditis elegans GN=rps-25 PE=3
SV=1
Length = 117
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 34 KEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMV 93
++K+NNMVLFDQATYDKL E YKLITPS++S+RL++ SLA+ ++EL A+GL++ V
Sbjct: 37 RDKLNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAKGLVKCV 96
Query: 94 SAHASQQIYTRAT 106
H Q +YTRAT
Sbjct: 97 VHHHGQVVYTRAT 109
>sp|Q6Q311|RS25_SHEEP 40S ribosomal protein S25 OS=Ovis aries GN=RPS25 PE=2 SV=1
Length = 125
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPSS-------KPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK + P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62853|RS25_RAT 40S ribosomal protein S25 OS=Rattus norvegicus GN=Rps25 PE=2 SV=1
Length = 125
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPSS-------KPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK + P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62852|RS25_MOUSE 40S ribosomal protein S25 OS=Mus musculus GN=Rps25 PE=2 SV=1
Length = 125
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPSS-------KPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK + P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P62851|RS25_HUMAN 40S ribosomal protein S25 OS=Homo sapiens GN=RPS25 PE=1 SV=1
Length = 125
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPSS-------KPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK + P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|Q56JX5|RS25_BOVIN 40S ribosomal protein S25 OS=Bos taurus GN=RPS25 PE=2 SV=1
Length = 125
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 82/113 (72%), Gaps = 7/113 (6%)
Query: 1 MAPKKDKAPPPSS-------KPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLS 53
M PK DK + P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL
Sbjct: 1 MPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCK 60
Query: 54 EAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
E P YKLITP+++S+RL+I GSLAR A++EL+++GLI++VS H +Q IYTR T
Sbjct: 61 EVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNT 113
>sp|P48588|RS25_DROME 40S ribosomal protein S25 OS=Drosophila melanogaster GN=RpS25 PE=1
SV=3
Length = 117
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQ------KEKVNNMVLFDQATYDKLLSE 54
M PKKD + +K K+ ++K+NN VLFD+ATY+KL E
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 55 APKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
P YKLITPS++S+RL+I GSLA++A+ EL +GLI+ V H SQ IYTRAT
Sbjct: 61 VPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRAT 112
>sp|Q962Q5|RS25_SPOFR 40S ribosomal protein S25 OS=Spodoptera frugiperda GN=RpS25 PE=3
SV=1
Length = 119
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQ------KEKVNNMVLFDQATYDKLLSE 54
M PKKD + +K K+ ++K+NN VLFD+ TY+KL E
Sbjct: 1 MPPKKDTKASAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKPTYEKLYKE 60
Query: 55 APKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
P+YKLITP+++S+RL++ GSLAR+A+ EL +GLI+ V H Q IYTRAT
Sbjct: 61 VPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 112
>sp|Q90YP9|RS25_ICTPU 40S ribosomal protein S25 OS=Ictalurus punctatus GN=rps25 PE=2 SV=1
Length = 124
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 82/112 (73%), Gaps = 6/112 (5%)
Query: 1 MAPKKDKAPPPSSK------PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSE 54
M PK K +SK P GGK KKKKWSKGK ++K+NN+VLFD+ATYDKL E
Sbjct: 1 MPPKDSKQKKDTSKAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLYKE 60
Query: 55 APKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQIYTRAT 106
P YKLITP+++S+RL+I GSLAR A+ EL+++G+I++VS H +Q IYTR T
Sbjct: 61 VPNYKLITPAVVSERLKIRGSLARAALLELLSKGMIKLVSKHRAQVIYTRNT 112
>sp|Q3E792|RS25A_YEAST 40S ribosomal protein S25-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS25A PE=1 SV=1
Length = 108
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVS 94
++ + V+ DQ YD++L E P Y+ ++ S+L DRL+I GSLAR A+R L G+I+ +S
Sbjct: 34 DRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPIS 93
Query: 95 AHASQQIYTRAT 106
H+ Q IYTRAT
Sbjct: 94 KHSKQAIYTRAT 105
>sp|O74172|RS25B_SCHPO 40S ribosomal protein S25-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps25b PE=3 SV=1
Length = 88
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVS 94
+K + +FD++ D++ E P +K I+ S+L DR++INGSLAR AIR+L RG+I+ V
Sbjct: 14 DKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVD 73
Query: 95 AHASQQIYTRA 105
H+ Q IYTRA
Sbjct: 74 QHSKQAIYTRA 84
>sp|P0C0T4|RS25B_YEAST 40S ribosomal protein S25-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS25B PE=1 SV=1
Length = 108
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVS 94
++ + V+ DQ YD++L E P Y+ ++ S+L DRL+I GSLAR A+R L G+I+ +S
Sbjct: 34 DRAQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPIS 93
Query: 95 AHASQQIYTRATNT 108
H+ Q IYTRA +
Sbjct: 94 KHSKQAIYTRAAAS 107
>sp|P79009|RS25A_SCHPO 40S ribosomal protein S25-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps25a PE=3 SV=2
Length = 89
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 35 EKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVS 94
+K + +FD++ D++ E P +K I+ S+L DR++INGSLAR AIR+L RG+I+ V
Sbjct: 14 DKAQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVD 73
Query: 95 AHASQQIYTRA 105
H+ Q IYTR
Sbjct: 74 QHSKQAIYTRV 84
>sp|Q6FPX5|RS25_CANGA 40S ribosomal protein S25 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS25
PE=3 SV=1
Length = 107
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 38 NNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHA 97
+ V+ DQ +D++L E P Y+ ++ S+L DRL+I GS+AR A+R L G+I+ +S H+
Sbjct: 37 QHAVILDQEKFDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLEREGIIKPISKHS 96
Query: 98 SQQIYTRAT 106
Q IYTRA+
Sbjct: 97 KQAIYTRAS 105
>sp|Q75DJ1|RS25_ASHGO 40S ribosomal protein S25 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS25 PE=3 SV=1
Length = 108
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 38 NNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHA 97
+ V+ DQ D++L E P Y+ ++ S+L DRL+I GS+AR A+R L G+I+ +S H+
Sbjct: 37 QHAVILDQDKLDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLETEGIIKPISKHS 96
Query: 98 SQQIYTRAT 106
Q IYTRAT
Sbjct: 97 KQAIYTRAT 105
>sp|Q7SC06|RS25_NEUCR 40S ribosomal protein S25 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-25
PE=3 SV=1
Length = 97
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 15 PAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRING 74
PA SG K++KKKWSKGK K+K + V+ D++T DKL + Y+L+T + L DRL+ING
Sbjct: 3 PAASGA-KKQKKKWSKGKVKDKAQHAVILDKSTSDKLYKDVQSYRLVTVATLVDRLKING 61
Query: 75 SLARKAIRELMARGLIRMVSAHASQQIYTRA 105
SLAR+ +++L +G I+ V H+ +IYTRA
Sbjct: 62 SLARRCLKDLEEKGQIKQVVGHSKMKIYTRA 92
>sp|Q97ZZ6|RS25_SULSO 30S ribosomal protein S25e OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps25e PE=3 SV=1
Length = 110
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 34 KEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMV 93
KE ++ V D+ T K+L E K +ITP L+ + I+ S+ARK ++EL + ++++
Sbjct: 38 KEIISRAVTIDEETKKKVLDEIKKESIITPYALATKSGISISVARKILKELENQNVVKLY 97
Query: 94 SAHASQQIYTRAT 106
S + +IY A+
Sbjct: 98 SKNRRLEIYIAAS 110
>sp|Q8STD9|RS25_ENCCU 40S ribosomal protein S25 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS25-1 PE=3 SV=1
Length = 109
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%)
Query: 20 GGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARK 79
G ++ KKKW G++KE+V V + K+ + + ++T ++ R +N +A
Sbjct: 19 GTRKDKKKWGDGRKKEEVRRAVTVSEELLAKVRKDVGRASVVTRYMIGSRYNLNLGVAEN 78
Query: 80 AIRELMARGLIRMVSAHASQQIY 102
+R L G+++ V + IY
Sbjct: 79 VLRHLSNEGVVQQVLGNRRMTIY 101
>sp|Q975P8|RS25_SULTO 30S ribosomal protein S25e OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps25e PE=3 SV=1
Length = 109
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 22 KQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAI 81
K+++K+ + KE + V+ D T K+ E K ++TP LS +L + S+A+K +
Sbjct: 25 KKQQKRATTKTGKELTSKNVVIDNETLKKVQEELKKETIVTPYTLSTKLNVTISVAKKIL 84
Query: 82 RELMARGLIRMVSAHASQQIYTRAT 106
EL +G++++ + +Y A+
Sbjct: 85 EELERQGVVKIGTKDRRTAVYIAAS 109
>sp|Q8ZVP1|RS25_PYRAE 30S ribosomal protein S25e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps25e PE=3 SV=1
Length = 110
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 42 LFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGLIRMVSAHASQQI 101
+ D+ + + E ++ITP ++ + I S+A K +R L RG + +V+ +I
Sbjct: 44 VLDEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRTEI 103
Query: 102 YTRA 105
Y A
Sbjct: 104 YVPA 107
>sp|P31399|ATP5H_RAT ATP synthase subunit d, mitochondrial OS=Rattus norvegicus GN=Atp5h
PE=1 SV=3
Length = 161
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 32 KQKEKVNNMVLFDQATYDKLLSEAPKYKL 60
KQ EK+ NM+ FDQ T D L P+ KL
Sbjct: 117 KQLEKIKNMIPFDQMTIDDLNEVFPETKL 145
>sp|Q9Y914|RS25_AERPE 30S ribosomal protein S25e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps25e
PE=3 SV=1
Length = 103
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 19 GGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKY----KLITPSILSDRLRING 74
GG KKK K+ EK +KL+ +A K + +TP L+ ++ +
Sbjct: 2 GGEDMAKKKAPSAKEGEKQQGFKEIIPEVTEKLVEQARKEVARERWVTPHKLAQKMGVKV 61
Query: 75 SLARKAIRELMARGLIRMVSAHASQQIY 102
S+AR+ +R L G++ + + + +Y
Sbjct: 62 SIARRVLRILEEEGVLVLFTRNRRSPLY 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.126 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,902,543
Number of Sequences: 539616
Number of extensions: 1449471
Number of successful extensions: 6196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 6072
Number of HSP's gapped (non-prelim): 128
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)