BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033936
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573441|ref|XP_002527646.1| conserved hypothetical protein [Ricinus communis]
gi|223532951|gb|EEF34717.1| conserved hypothetical protein [Ricinus communis]
Length = 121
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLN 60
MNSTSPA+SS+STT +VGGGS +N + DEF FPSDLISI DRK+EA VL++DLM TLN
Sbjct: 1 MNSTSPAHSSVSTTAIVGGGSVTN-PSFDEFQFPSDLISIHDRKEEAFLVLKADLMVTLN 59
Query: 61 KEVKSLDEDNWMFEGPRSHIHLISTAGGFLNKQLETSKSRNLAPSK 106
KEVKSLDEDNW FEGPRS IHLIS GGF NK++E +KSRNL K
Sbjct: 60 KEVKSLDEDNWKFEGPRSCIHLISRPGGFPNKKMEITKSRNLVQPK 105
>gi|225433788|ref|XP_002272866.1| PREDICTED: uncharacterized protein LOC100244603 [Vitis vinifera]
Length = 106
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 83/102 (81%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLN 60
MNSTSPA+S IS + +VGGGSSS A+++F PSD ISIQDRKDEAL VL+SDLMA LN
Sbjct: 1 MNSTSPAHSVISGSAVVGGGSSSTALASEDFPLPSDPISIQDRKDEALLVLKSDLMAALN 60
Query: 61 KEVKSLDEDNWMFEGPRSHIHLISTAGGFLNKQLETSKSRNL 102
KEVKSLDEDNW F+GPRS IHL+S GG L+K++E++ RN
Sbjct: 61 KEVKSLDEDNWKFDGPRSRIHLLSRPGGVLHKRVESTNHRNF 102
>gi|297745182|emb|CBI39174.3| unnamed protein product [Vitis vinifera]
Length = 99
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 73/88 (82%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLN 60
MNSTSPA+S IS + +VGGGSSS A+++F PSD ISIQDRKDEAL VL+SDLMA LN
Sbjct: 1 MNSTSPAHSVISGSAVVGGGSSSTALASEDFPLPSDPISIQDRKDEALLVLKSDLMAALN 60
Query: 61 KEVKSLDEDNWMFEGPRSHIHLISTAGG 88
KEVKSLDEDNW F+GPRS IHL+S GG
Sbjct: 61 KEVKSLDEDNWKFDGPRSRIHLLSRPGG 88
>gi|449436836|ref|XP_004136198.1| PREDICTED: uncharacterized protein LOC101211880 isoform 2
[Cucumis sativus]
gi|449525812|ref|XP_004169910.1| PREDICTED: uncharacterized LOC101211880 isoform 2 [Cucumis
sativus]
Length = 99
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLN 60
MN+ SPANSS+STT + G S++ + D+F FPS+LIS+ +RKDEA+ L+S++MA LN
Sbjct: 1 MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALN 60
Query: 61 KEVKSLDEDNWMFEGPRSHIHLISTAGG-FLNKQLETSK 98
KEVKSLD+DNWMFEGPRS I+L+S GG FL K E +
Sbjct: 61 KEVKSLDDDNWMFEGPRSRINLMSRQGGAFLKKTEEKRR 99
>gi|224138988|ref|XP_002326740.1| predicted protein [Populus trichocarpa]
gi|222834062|gb|EEE72539.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 MNSTSPANSSISTTPLVGGGSSS-NNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATL 59
MNSTSP NSS+STT ++GGG S +N A D+FHFPSDLISIQDRKDEA+ L++DLMA L
Sbjct: 1 MNSTSPTNSSVSTTAIIGGGGGSVSNAALDDFHFPSDLISIQDRKDEAMLALKTDLMAAL 60
Query: 60 NKEVKSLDEDNWMFEGPRSHIHLIS 84
NKEVKSLDEDNW F GPRS I+LIS
Sbjct: 61 NKEVKSLDEDNWKFGGPRSRINLIS 85
>gi|449436834|ref|XP_004136197.1| PREDICTED: uncharacterized protein LOC101211880 isoform 1
[Cucumis sativus]
gi|449525810|ref|XP_004169909.1| PREDICTED: uncharacterized LOC101211880 isoform 1 [Cucumis
sativus]
Length = 113
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 70/88 (79%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLN 60
MN+ SPANSS+STT + G S++ + D+F FPS+LIS+ +RKDEA+ L+S++MA LN
Sbjct: 1 MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALN 60
Query: 61 KEVKSLDEDNWMFEGPRSHIHLISTAGG 88
KEVKSLD+DNWMFEGPRS I+L+S G
Sbjct: 61 KEVKSLDDDNWMFEGPRSRINLMSRQGA 88
>gi|18398373|ref|NP_564394.1| uncharacterized protein [Arabidopsis thaliana]
gi|12597860|gb|AAG60169.1|AC084110_2 unknown protein [Arabidopsis thaliana]
gi|21554525|gb|AAM63599.1| unknown [Arabidopsis thaliana]
gi|28393556|gb|AAO42198.1| unknown protein [Arabidopsis thaliana]
gi|28973599|gb|AAO64124.1| unknown protein [Arabidopsis thaliana]
gi|332193341|gb|AEE31462.1| uncharacterized protein [Arabidopsis thaliana]
Length = 100
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTAT-DEFHFPSDLISIQDRKDEALQVLRSDLMATL 59
MN SPA+S +STT + GGG SS A D+FHFP D+ S+Q+RKDEA++VL++DLM L
Sbjct: 1 MNGASPAHSLVSTTAVAGGGGSSGAAAGLDDFHFPPDIPSMQERKDEAMRVLKADLMTEL 60
Query: 60 NKEVKSLDEDNWMFEGPRSHIHLISTAGGFLNK 92
+KEVKSL+ED+WMFEGPRS IHLIS G FL K
Sbjct: 61 DKEVKSLEEDSWMFEGPRSRIHLISRRGNFLKK 93
>gi|356531437|ref|XP_003534284.1| PREDICTED: uncharacterized protein LOC100795957 [Glycine max]
Length = 111
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 21 SSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHI 80
SS+ + D+FH P D IS Q+RKDEA+ VL+SDLMA L+KEVKSL EDNW FEGPRS I
Sbjct: 26 SSNATVSIDDFHLPCDPISSQERKDEAMIVLKSDLMAALDKEVKSLVEDNWKFEGPRSRI 85
Query: 81 HLISTAGGFLNKQLETSKSRNLAPSK 106
HL+S GG L + E SK+ NL P K
Sbjct: 86 HLVSHRGGHLYRPTEISKNWNLTPPK 111
>gi|388491252|gb|AFK33692.1| unknown [Lotus japonicus]
Length = 109
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
Query: 1 MNSTSPANSSISTTPLVGGGSSSNNTAT-DEFHFPSDLISIQDRKDEALQVLRSDLMATL 59
MNS+SPA+SSISTT +V GG +SN + D+ HFP D IS Q+RKDE + VL+SD+MA L
Sbjct: 1 MNSSSPAHSSISTTAVVSGGGASNAAVSFDDLHFPFDPISTQERKDEVMLVLKSDIMAAL 60
Query: 60 NKEVKSLDEDNWMFEGPRSHIHLIST--AGGFLNKQLETSKSRNLAPSK 106
+KEVKSLDEDNW FEGPRS I+L S GG L Q E SK+ NL P K
Sbjct: 61 DKEVKSLDEDNWKFEGPRSRINLTSRRGGGGPLPWQTEISKNWNLPPPK 109
>gi|357485111|ref|XP_003612843.1| hypothetical protein MTR_5g029660 [Medicago truncatula]
gi|355514178|gb|AES95801.1| hypothetical protein MTR_5g029660 [Medicago truncatula]
Length = 110
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 26 TATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLIS- 84
+ D+FHFP D IS ++RKDEA+ VL+SDLMA L+KEVKSLDEDNW FEGPRS IHL+S
Sbjct: 29 VSVDDFHFPYDHISTEERKDEAMLVLKSDLMAALDKEVKSLDEDNWKFEGPRSRIHLVSR 88
Query: 85 TAGGFLNKQLETSKSRNLAPSK 106
GG L++ E SK+ N P K
Sbjct: 89 RGGGHLHRPTEISKNWNFTPPK 110
>gi|224074313|ref|XP_002304350.1| predicted protein [Populus trichocarpa]
gi|222841782|gb|EEE79329.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/63 (77%), Positives = 55/63 (87%)
Query: 22 SSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIH 81
S NN D+FHFPSDLISIQDRKDEA+ L++DLMA LNKEVKSLD+DNW FEGPRSHI+
Sbjct: 23 SVNNVVLDDFHFPSDLISIQDRKDEAMLALKTDLMAALNKEVKSLDDDNWKFEGPRSHIN 82
Query: 82 LIS 84
LIS
Sbjct: 83 LIS 85
>gi|356496285|ref|XP_003516999.1| PREDICTED: uncharacterized protein LOC100812279 [Glycine max]
Length = 112
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 21 SSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHI 80
SS+ + D+FH P D IS Q+RKDEA+ VL+SDLMA LNKEVKSL EDNW FEGPRS I
Sbjct: 26 SSNATVSIDDFHLPCDPISSQERKDEAMLVLKSDLMAALNKEVKSLVEDNWKFEGPRSRI 85
Query: 81 HLIS-TAGGFLNKQLETSKSRNLAPSK 106
HL+S GG L + E SK+ NL P K
Sbjct: 86 HLVSHRGGGHLYRPTEISKNWNLTPPK 112
>gi|8920604|gb|AAF81326.1|AC007767_6 Strong similarity to an unknown protein F19D11.4 gi|7485759 from
Arabidopsis thaliana BAC F19D11 gb|AC005310. EST
gb|AV535485 comes from this gene [Arabidopsis thaliana]
Length = 647
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 56/68 (82%)
Query: 29 DEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAGG 88
D+FHFP D+ S+Q+RKDEA++VL++DLM L+KEVKSL+ED+WMFEGPRS IHLIS G
Sbjct: 577 DDFHFPPDIPSMQERKDEAMRVLKADLMTELDKEVKSLEEDSWMFEGPRSRIHLISRRGN 636
Query: 89 FLNKQLET 96
FL K E
Sbjct: 637 FLKKGGEV 644
>gi|297846198|ref|XP_002890980.1| hypothetical protein ARALYDRAFT_313803 [Arabidopsis lyrata subsp.
lyrata]
gi|297336822|gb|EFH67239.1| hypothetical protein ARALYDRAFT_313803 [Arabidopsis lyrata subsp.
lyrata]
Length = 636
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/59 (69%), Positives = 52/59 (88%)
Query: 29 DEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAG 87
D+FHFP D+ S+Q+RKDEA++VL++DLMA L+KEVKSL+ED+WMFEG RS IHLIS G
Sbjct: 578 DDFHFPPDIPSMQERKDEAMRVLKADLMAELDKEVKSLEEDSWMFEGTRSRIHLISRRG 636
>gi|297727849|ref|NP_001176288.1| Os10g0575950 [Oryza sativa Japonica Group]
gi|18266651|gb|AAL67597.1|AC018929_19 unknown protein [Oryza sativa Japonica Group]
gi|218185071|gb|EEC67498.1| hypothetical protein OsI_34769 [Oryza sativa Indica Group]
gi|222613326|gb|EEE51458.1| hypothetical protein OsJ_32573 [Oryza sativa Japonica Group]
gi|255679668|dbj|BAH95016.1| Os10g0575950 [Oryza sativa Japonica Group]
Length = 99
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 43 RKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAGGFLNKQLE 95
RKDEA+ L+S++M L KEV+SLD+D+WMF PRS I+L+S +GG+L KQ E
Sbjct: 32 RKDEAMAELKSEVMEALQKEVRSLDDDSWMFAAPRSRINLVSMSGGYLRKQQE 84
>gi|226529925|ref|NP_001144606.1| uncharacterized protein LOC100277622 [Zea mays]
gi|195644528|gb|ACG41732.1| hypothetical protein [Zea mays]
gi|195655631|gb|ACG47283.1| hypothetical protein [Zea mays]
gi|414867901|tpg|DAA46458.1| TPA: hypothetical protein ZEAMMB73_394829 [Zea mays]
Length = 91
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 17/90 (18%)
Query: 4 TSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEV 63
+SPA S+IS V +D I RKDEAL L+S++M L +EV
Sbjct: 2 SSPARSTISAAEDV-----------------ADSIDALYRKDEALAELKSEVMEALQREV 44
Query: 64 KSLDEDNWMFEGPRSHIHLISTAGGFLNKQ 93
+SLDEDNWMF PRS I+L+S G +L KQ
Sbjct: 45 RSLDEDNWMFAAPRSRINLVSRPGAYLPKQ 74
>gi|195618228|gb|ACG30944.1| hypothetical protein [Zea mays]
gi|195640436|gb|ACG39686.1| hypothetical protein [Zea mays]
Length = 91
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 17/90 (18%)
Query: 4 TSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEV 63
+SPA S+IS V +D I RKDEA+ L+S++M L +EV
Sbjct: 2 SSPARSTISAAEDV-----------------ADSIDALYRKDEAMAELKSEVMEALQREV 44
Query: 64 KSLDEDNWMFEGPRSHIHLISTAGGFLNKQ 93
+SLDEDNWMF PRS I+L+S G +L KQ
Sbjct: 45 RSLDEDNWMFAAPRSRINLVSRPGAYLPKQ 74
>gi|116778498|gb|ABK20885.1| unknown [Picea sitchensis]
Length = 99
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 32 HFPSDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAGGFLN 91
H ++L QDRK+E L L+ D+ A L KEVK+LD D W F PRS IHLIS AG +
Sbjct: 15 HMAAELTFTQDRKEETLNALKEDVEAALEKEVKALDADAWKFAAPRSQIHLISRAGSQSS 74
Query: 92 KQLETSKSRNLAPSKF 107
LE+++ + F
Sbjct: 75 GWLESTRQELMEAENF 90
>gi|242034967|ref|XP_002464878.1| hypothetical protein SORBIDRAFT_01g028110 [Sorghum bicolor]
gi|241918732|gb|EER91876.1| hypothetical protein SORBIDRAFT_01g028110 [Sorghum bicolor]
Length = 99
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 35 SDLISIQDRKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAGGFLNKQ 93
+D I RKDEA+ L+S++M L +EV+SLD+D+WMF PRS I+L+S G +L KQ
Sbjct: 24 ADFIDALYRKDEAMAELKSEVMEALQREVRSLDDDSWMFAAPRSRINLVSRPGAYLPKQ 82
>gi|357147557|ref|XP_003574392.1| PREDICTED: uncharacterized protein LOC100839840 [Brachypodium
distachyon]
Length = 102
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 43 RKDEALQVLRSDLMATLNKEVKSLDEDNWMFEGPRSHIHLISTAGGFLNKQ 93
RKDEA+ LRS+++ L KEVKSLD+D+WMF PR+ I+L+S G +L KQ
Sbjct: 35 RKDEAMAELRSEVIEALRKEVKSLDDDSWMFAAPRTRINLVSRPGAYLPKQ 85
>gi|242078971|ref|XP_002444254.1| hypothetical protein SORBIDRAFT_07g019070 [Sorghum bicolor]
gi|241940604|gb|EES13749.1| hypothetical protein SORBIDRAFT_07g019070 [Sorghum bicolor]
Length = 126
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 4 TSPANSSISTTPLVGGGSSSNNTATDEFHFPSDLISIQDRKDEALQVLRSDLMATLNKEV 63
+SP S++S GG+ S AT++ +D I RKDE + L+S++M L +EV
Sbjct: 2 SSPTRSTVSAA---SGGAVS---ATEDI---ADSIDALYRKDEVMAELKSEVMEVLLREV 52
Query: 64 KSLDEDNWMFEGPRSHIHLISTAGGFLNKQ 93
+SLD+D+WMF PRS I+L+S+ G +L KQ
Sbjct: 53 RSLDDDSWMFATPRSRINLVSSPGAYLPKQ 82
>gi|66826021|ref|XP_646365.1| hypothetical protein DDB_G0270982 [Dictyostelium discoideum AX4]
gi|60474904|gb|EAL72841.1| hypothetical protein DDB_G0270982 [Dictyostelium discoideum AX4]
Length = 70
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 45 DEALQVLRSDL----MATLNKEVKSLDEDNWMFEGPRSH 79
D A+Q L+ +L M L +VK LD+DNWMFE SH
Sbjct: 28 DGAIQQLKPELSNEIMDDLRAKVKDLDKDNWMFETNHSH 66
>gi|407922724|gb|EKG15819.1| hypothetical protein MPH_06958 [Macrophomina phaseolina MS6]
Length = 120
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 20 GSSSNNTATDEFHFPSDLISIQDRKDEALQV--LRSDLMATLNKEVKSLDEDNWMFEG 75
G + A +E S LI + + ++ L++ L A+L +V+SL+ED WMFEG
Sbjct: 57 GPLPRDDAREEREADSRLIETYRKHQQHIEPNELKATLQASLQAKVESLEEDKWMFEG 114
>gi|429857930|gb|ELA32767.1| ars binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 640
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 3/36 (8%)
Query: 36 DLISIQDRKDEALQVLRSDLMATLN---KEVKSLDE 68
DL+++ +R+D+ LQ LRS L++TL+ K+ K LDE
Sbjct: 599 DLLAVSERRDKELQDLRSGLVSTLSKTFKDAKELDE 634
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.125 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,616,439,055
Number of Sequences: 23463169
Number of extensions: 55259477
Number of successful extensions: 146416
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 146377
Number of HSP's gapped (non-prelim): 33
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 69 (31.2 bits)