Query 033943
Match_columns 108
No_of_seqs 149 out of 1067
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 13:25:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 6.1E-45 2.1E-49 235.1 12.6 106 2-107 7-113 (125)
2 2h2y_A Ubiquitin-conjugating e 100.0 3.1E-44 1.1E-48 234.7 13.6 106 2-107 21-127 (136)
3 4gpr_A Ubiquitin-conjugating e 100.0 2.3E-44 7.9E-49 238.9 13.0 107 1-107 4-110 (151)
4 2ayv_A Ubiquitin-conjugating e 100.0 5E-44 1.7E-48 240.5 13.8 107 1-107 21-127 (166)
5 1z2u_A Ubiquitin-conjugating e 100.0 3.1E-44 1.1E-48 238.0 12.0 107 1-107 4-110 (150)
6 2r0j_A Ubiquitin carrier prote 100.0 4E-44 1.4E-48 237.3 12.0 106 2-107 2-107 (149)
7 2c4o_A Ubiquitin-conjugating e 100.0 7.1E-44 2.4E-48 239.6 13.2 107 1-107 19-125 (165)
8 1fxt_A Ubiquitin-conjugating e 100.0 2.6E-44 9E-49 238.1 10.9 107 1-107 1-109 (149)
9 2a7l_A Hypothetical ubiquitin- 100.0 5.1E-44 1.8E-48 233.7 11.5 105 3-107 24-132 (136)
10 2c2v_B Ubiquitin-conjugating e 100.0 4.9E-44 1.7E-48 238.0 11.4 107 1-107 5-111 (154)
11 1ayz_A UBC2, ubiquitin-conjuga 100.0 1E-43 3.4E-48 239.6 12.6 106 2-107 5-110 (169)
12 2e2c_A Ubiquitin conjugating e 100.0 1.5E-43 5.1E-48 236.1 13.1 107 1-107 9-115 (156)
13 1jat_A Ubiquitin-conjugating e 100.0 1.1E-43 3.6E-48 236.6 11.7 107 1-107 5-111 (155)
14 1zdn_A Ubiquitin-conjugating e 100.0 1.4E-43 5E-48 236.6 12.3 106 2-107 14-119 (158)
15 3h8k_A Ubiquitin-conjugating e 100.0 3.5E-43 1.2E-47 235.9 13.7 107 1-107 3-123 (164)
16 2aak_A UBC1, ubiquitin conjuga 100.0 2.4E-43 8E-48 234.3 12.6 106 2-107 5-110 (152)
17 1yh2_A HSPC150 protein similar 100.0 4.6E-43 1.6E-47 236.4 13.7 106 2-107 5-114 (169)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 4.9E-43 1.7E-47 235.4 13.6 106 2-107 5-124 (165)
19 1i7k_A Ubiquitin-conjugating e 100.0 2.6E-43 9E-48 239.4 11.8 107 1-107 30-136 (179)
20 3rcz_B SUMO-conjugating enzyme 100.0 8.2E-43 2.8E-47 234.0 12.1 106 2-107 11-123 (163)
21 3bzh_A Ubiquitin-conjugating e 100.0 1.6E-42 5.5E-47 238.1 13.7 106 2-107 49-154 (194)
22 2awf_A Ubiquitin-conjugating e 100.0 2E-42 6.9E-47 233.9 13.8 107 1-107 17-137 (172)
23 3rz3_A Ubiquitin-conjugating e 100.0 2E-42 6.7E-47 235.9 13.6 106 2-107 8-127 (183)
24 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.2E-42 7.6E-47 237.2 12.5 107 1-107 32-152 (193)
25 1yrv_A Ubiquitin-conjugating l 100.0 1.1E-42 3.6E-47 234.6 10.5 106 2-107 24-132 (169)
26 2bep_A Ubiquitin-conjugating e 100.0 3.5E-42 1.2E-46 230.1 12.9 106 2-107 9-118 (159)
27 2pwq_A Ubiquitin conjugating e 100.0 1.6E-42 5.3E-47 241.4 10.9 106 2-107 24-130 (216)
28 2gjd_A Ubiquitin-conjugating e 100.0 2.8E-42 9.5E-47 230.2 10.9 106 2-107 5-117 (157)
29 3k9o_A Ubiquitin-conjugating e 100.0 7.3E-42 2.5E-46 236.0 13.1 107 1-107 5-115 (201)
30 1wzv_A Ubiquitin-conjugating e 100.0 5.2E-42 1.8E-46 228.4 11.8 106 1-107 4-111 (155)
31 2a4d_A Ubiquitin-conjugating e 100.0 2.6E-41 8.8E-46 226.0 12.8 106 2-107 26-138 (160)
32 2grr_A Ubiquitin-conjugating e 100.0 1.6E-41 5.3E-46 227.4 11.6 106 2-107 8-120 (161)
33 1tte_A Ubiquitin-conjugating e 100.0 3.6E-42 1.2E-46 239.5 7.7 107 1-107 2-110 (215)
34 1y8x_A Ubiquitin-conjugating e 100.0 3.5E-41 1.2E-45 225.5 12.1 103 2-107 7-110 (160)
35 3e46_A Ubiquitin-conjugating e 100.0 8.9E-41 3E-45 237.1 12.3 106 2-107 58-167 (253)
36 3fn1_B NEDD8-conjugating enzym 100.0 1.4E-40 4.7E-45 223.9 12.4 105 2-107 15-126 (167)
37 2nvu_C NEDD8-conjugating enzym 100.0 8.2E-41 2.8E-45 227.4 11.3 103 2-107 27-130 (180)
38 1c4z_D UBCH7, ubiquitin conjug 100.0 3.9E-41 1.3E-45 224.0 9.5 106 1-107 2-109 (154)
39 2q0v_A Ubiquitin-conjugating e 100.0 1.6E-40 5.6E-45 221.4 12.1 105 2-107 22-133 (156)
40 2hlw_A Ubiquitin-conjugating e 100.0 9.1E-41 3.1E-45 225.3 10.1 106 2-107 36-148 (170)
41 1jat_B Ubiquitin-conjugating e 100.0 2.2E-40 7.6E-45 216.9 11.4 105 2-107 7-118 (138)
42 2y9m_A Ubiquitin-conjugating e 100.0 4E-40 1.4E-44 222.6 13.0 106 2-107 7-127 (172)
43 2onu_A Ubiquitin-conjugating e 100.0 5E-41 1.7E-45 223.1 6.0 103 2-107 3-107 (152)
44 4ddg_A Ubiquitin-conjugating e 100.0 5.8E-40 2E-44 245.7 12.0 107 1-107 3-109 (399)
45 4ds2_A Ubiquitin-conjugating e 100.0 2.4E-40 8.3E-45 222.7 8.1 105 1-105 8-126 (167)
46 2f4w_A Ubiquitin-conjugating e 100.0 2.6E-39 9E-44 221.1 12.3 105 1-107 14-121 (187)
47 2z5d_A Ubiquitin-conjugating e 100.0 4.8E-40 1.7E-44 223.3 7.4 102 2-107 26-129 (179)
48 3o2u_A NEDD8-conjugating enzym 100.0 3.5E-39 1.2E-43 220.9 11.5 103 2-107 30-139 (190)
49 1zuo_A Hypothetical protein LO 100.0 8.2E-40 2.8E-44 223.4 7.9 106 2-107 28-150 (186)
50 1yf9_A Ubiquitin carrier prote 100.0 2.6E-39 8.9E-44 218.4 8.4 101 2-106 13-114 (171)
51 3ceg_A Baculoviral IAP repeat- 100.0 1.1E-37 3.6E-42 227.2 12.4 106 2-107 77-199 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 3.2E-32 1.1E-36 181.1 1.2 96 3-104 34-144 (172)
53 3kpa_A Probable ubiquitin fold 99.9 7.4E-24 2.5E-28 138.4 0.5 95 3-103 36-145 (168)
54 3r3q_A Suppressor protein STP2 99.8 1.2E-19 4E-24 121.1 8.1 103 4-107 31-151 (162)
55 3obq_A Tumor susceptibility ge 99.6 1.1E-15 3.8E-20 100.3 6.1 75 27-107 50-133 (146)
56 2ebm_A RWD domain-containing p 97.3 0.0021 7E-08 40.3 8.6 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 97.0 0.0071 2.4E-07 37.8 8.8 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 97.0 0.012 4E-07 37.3 9.7 67 5-72 14-86 (138)
59 3zqs_A E3 ubiquitin-protein li 96.2 0.05 1.7E-06 36.6 8.7 80 4-107 4-83 (186)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 96.0 0.066 2.3E-06 33.6 8.3 67 4-71 13-86 (137)
61 2ebk_A RWD domain-containing p 95.6 0.062 2.1E-06 33.4 7.0 66 5-71 11-79 (128)
62 2daw_A RWD domain containing p 93.6 0.073 2.5E-06 34.4 3.6 24 49-72 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 93.3 0.056 1.9E-06 34.7 2.8 24 49-72 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 73.0 2.9 0.0001 18.3 2.0 19 3-21 7-25 (26)
65 2bum_A Protocatechuate 3,4-dio 48.9 20 0.00068 24.2 3.7 25 46-70 109-138 (209)
66 3pft_A Flavin reductase; desul 38.7 15 0.0005 23.2 1.7 30 62-91 42-74 (157)
67 2c5k_P Vacuolar protein sortin 35.0 20 0.00067 16.1 1.3 12 4-15 13-24 (26)
68 2cu9_A Spcia1, histone chapero 32.3 75 0.0026 20.6 4.3 38 29-66 36-86 (161)
69 3rls_A YAF9, protein AF-9 homo 32.0 1.1E+02 0.0037 20.1 6.1 41 28-70 30-70 (175)
70 2bum_B Protocatechuate 3,4-dio 30.2 33 0.0011 23.6 2.5 24 47-70 135-165 (241)
71 3t63_M 3,4-PCD, protocatechuat 29.5 34 0.0012 23.5 2.5 24 47-70 134-164 (238)
72 3rco_A Tudor domain-containing 29.1 33 0.0011 20.0 2.0 18 2-19 30-47 (89)
73 2xsu_A Catechol 1,2 dioxygenas 29.0 35 0.0012 24.5 2.5 24 47-70 188-229 (312)
74 3kxt_A Chromatin protein CREN7 28.6 42 0.0014 17.8 2.2 11 52-62 46-56 (56)
75 1m46_B IQ4, IQ4 motif from MYO 28.1 41 0.0014 14.6 1.7 11 3-13 10-20 (26)
76 3t63_A 3,4-PCD, protocatechuat 27.9 43 0.0015 22.3 2.7 23 48-70 102-129 (200)
77 2azq_A Catechol 1,2-dioxygenas 27.6 38 0.0013 24.3 2.5 24 47-70 184-225 (311)
78 1tmx_A Hydroxyquinol 1,2-dioxy 27.6 39 0.0013 24.0 2.5 25 46-70 183-225 (293)
79 2ecu_A Flavin reductase (HPAC) 27.4 13 0.00046 23.1 0.1 31 62-92 40-73 (149)
80 3n9t_A PNPC; phospholipid bind 26.7 41 0.0014 23.9 2.5 24 47-70 181-222 (290)
81 2jrw_A Cyclic extended PEP.1; 25.6 13 0.00044 16.2 -0.2 9 68-76 11-19 (26)
82 1roc_A Anti-silencing protein 25.3 1.2E+02 0.0042 19.4 4.3 30 29-58 37-79 (155)
83 2boy_A 3-chlorocatechol 1,2-di 25.3 46 0.0016 23.1 2.5 24 47-70 154-195 (254)
84 3qrl_A Transcription initiatio 25.2 1.3E+02 0.0046 18.9 5.8 43 30-74 32-77 (140)
85 4hx6_A Oxidoreductase; structu 24.2 19 0.00064 23.5 0.3 31 62-92 57-90 (185)
86 1dmh_A 1,2-CTD, catechol 1,2-d 24.2 47 0.0016 23.8 2.5 24 47-70 187-228 (311)
87 2d37_A Hypothetical NADH-depen 23.7 33 0.0011 22.1 1.5 30 61-90 59-91 (176)
88 2r0x_A Possible flavin reducta 23.0 16 0.00055 23.0 -0.2 30 63-92 44-76 (158)
89 3hhy_A 1,2-CTD, catechol 1,2-d 22.9 47 0.0016 23.5 2.2 24 47-70 183-224 (280)
90 2qck_A Flavin reductase domain 22.8 20 0.00069 22.9 0.2 30 62-91 48-80 (167)
91 3g9r_A Fusion complex of HIV-1 21.9 66 0.0023 15.8 2.0 12 3-14 30-41 (42)
92 1b33_N Phycobilisome 7.8 KD li 21.8 93 0.0032 17.1 2.8 26 3-28 33-58 (67)
93 3s93_A Tudor domain-containing 21.7 61 0.0021 19.2 2.3 19 2-20 28-46 (102)
94 1yoa_A Putative flavoprotein; 21.5 17 0.00059 22.7 -0.3 31 62-92 41-74 (159)
95 3th1_A Chlorocatechol 1,2-diox 20.8 98 0.0033 21.5 3.5 24 47-70 151-192 (260)
96 2k6w_A Putative uncharacterize 20.0 1.1E+02 0.0038 18.5 3.2 26 33-58 82-107 (120)
97 2idc_A Anti-silencing protein 20.0 1.8E+02 0.006 19.2 4.4 30 29-58 38-80 (179)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=6.1e-45 Score=235.09 Aligned_cols=106 Identities=37% Similarity=0.693 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecC-ccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i-~Hpnv~~ 80 (108)
|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ +||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|+||+|+|.++|+|++||++||++||
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~ 113 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSII 113 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-44 Score=234.73 Aligned_cols=106 Identities=37% Similarity=0.695 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecC-ccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i-~Hpnv~~ 80 (108)
|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ +||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|+||+++|.++|+|+++|++||++||
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~vL~si~ 127 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISGLILSII 127 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEECccccCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.3e-44 Score=238.92 Aligned_cols=107 Identities=65% Similarity=1.252 Sum_probs=105.1
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSIS 110 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=5e-44 Score=240.54 Aligned_cols=107 Identities=76% Similarity=1.318 Sum_probs=104.9
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~ 127 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSIS 127 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=3.1e-44 Score=238.02 Aligned_cols=107 Identities=75% Similarity=1.349 Sum_probs=104.8
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSIC 110 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999997
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4e-44 Score=237.30 Aligned_cols=106 Identities=46% Similarity=0.897 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|.||+++|.++|+|++||++||++||
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~ 107 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQ 107 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999997
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=7.1e-44 Score=239.59 Aligned_cols=107 Identities=76% Similarity=1.333 Sum_probs=104.7
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~ 125 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSIC 125 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHH
Confidence 999999999999999999999999997
No 8
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.6e-44 Score=238.15 Aligned_cols=107 Identities=49% Similarity=0.954 Sum_probs=104.5
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCC-CcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~-n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
||.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6899999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 80 S-NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
. +|.||+++|.++|+|+++|++||++||
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~ 109 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQ 109 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHH
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHH
Confidence 8 999999999999999999999999997
No 9
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.1e-44 Score=233.66 Aligned_cols=105 Identities=39% Similarity=0.765 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhcCCCCCeEEe--ecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCc--ccee
Q 033943 3 SKRILKELKDLQKDPPTSCSAG--PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVF--HPNI 78 (108)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~--~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~--Hpnv 78 (108)
++||++|++++++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+++ ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999965 88899999999999999999999999999999999999999999999999 9999
Q ss_pred eCCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 79 NSNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+.+|+||+|+|.++|+|+++|++||++||
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 132 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSII 132 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999998
No 10
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-44 Score=238.05 Aligned_cols=107 Identities=42% Similarity=0.803 Sum_probs=104.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 84 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 111 (154)
T 2c2v_B 85 LGRICLDILKDKWSPALQIRTVLLSIQ 111 (154)
T ss_dssp TCBBCCHHHHTSCCTTCCHHHHHHHHH
T ss_pred CCeEEchhccCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 11
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1e-43 Score=239.65 Aligned_cols=106 Identities=39% Similarity=0.914 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|.||+++|.++|+|+++|++||++||
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~ 110 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQ 110 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHH
Confidence 99999999999999999999999997
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-43 Score=236.09 Aligned_cols=107 Identities=39% Similarity=0.788 Sum_probs=104.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si~ 115 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLSLQ 115 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CceEECccccccCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 13
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.1e-43 Score=236.62 Aligned_cols=107 Identities=46% Similarity=0.828 Sum_probs=104.5
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 111 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQ 111 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999997
No 14
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-43 Score=236.62 Aligned_cols=106 Identities=40% Similarity=0.758 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|.||+++|.++|+|+++|++||++||
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~ 119 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIK 119 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHH
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999997
No 15
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=3.5e-43 Score=235.89 Aligned_cols=107 Identities=44% Similarity=0.902 Sum_probs=103.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCC-CcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~-n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
.|++||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 3789999999999999999999998876 999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEecCCC-------------CCCCCcCcHHHHHhhhh
Q 033943 80 SNGSICLDILK-------------EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~iq 107 (108)
.+|+||+++|. ++|+|++||++||++||
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~ 123 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVV 123 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHH
Confidence 99999999997 78999999999999997
No 16
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.4e-43 Score=234.25 Aligned_cols=106 Identities=46% Similarity=0.962 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|.||+++|.++|+|+++|++||++||
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQ 110 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999997
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-43 Score=236.42 Aligned_cols=106 Identities=38% Similarity=0.771 Sum_probs=103.9
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCC----CCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILK----EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~----~~W~p~~~i~~il~~iq 107 (108)
|.||+|+|. ++|+|+++|++||++||
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~ 114 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQ 114 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHH
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHH
Confidence 999999998 89999999999999997
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-43 Score=235.44 Aligned_cols=106 Identities=48% Similarity=0.998 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecC-CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 78999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCC-------------CCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDIL-------------KEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l-------------~~~W~p~~~i~~il~~iq 107 (108)
+|+||+++| .++|+|+++|++||++||
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 124 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVM 124 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHH
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHH
Confidence 999999999 688999999999999997
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-43 Score=239.42 Aligned_cols=107 Identities=36% Similarity=0.671 Sum_probs=104.4
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
.|.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~sI~ 136 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLSIQ 136 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHHHH
Confidence 999999999999999999999999997
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=8.2e-43 Score=234.01 Aligned_cols=106 Identities=37% Similarity=0.840 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCC-----CcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccc
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~-----n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hp 76 (108)
|++||++|+++|++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999999876 999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCeEEecCCCCC--CCCcCcHHHHHhhhh
Q 033943 77 NINSNGSICLDILKEQ--WSPALTISKMTLWCQ 107 (108)
Q Consensus 77 nv~~~G~icl~~l~~~--W~p~~~i~~il~~iq 107 (108)
||+.+|.||+++|.+. |+|+++|++||++||
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~ 123 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQ 123 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHH
Confidence 9999999999999754 999999999999997
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.6e-42 Score=238.09 Aligned_cols=106 Identities=60% Similarity=1.165 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (108)
|.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||.|+|+|.||++||++||+|+|.|++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 82 GSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|.||+++|.++|+|+++|++||++||
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~ 154 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSIC 154 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CceechhhhccCCCcCcHHHHHHHHH
Confidence 99999999999999999999999997
No 22
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=2e-42 Score=233.85 Aligned_cols=107 Identities=39% Similarity=0.899 Sum_probs=102.8
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecC-CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~-~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
.|.+||+||+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 378999999999999999999999876 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEecCCC-------------CCCCCcCcHHHHHhhhh
Q 033943 80 SNGSICLDILK-------------EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il~~iq 107 (108)
.+|+||+++|. ++|+|+++|++||++||
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~ 137 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVI 137 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHH
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHH
Confidence 99999999996 68999999999999997
No 23
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=2e-42 Score=235.90 Aligned_cols=106 Identities=38% Similarity=0.840 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
|.|||++|+++|++++++|+++. ++++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 68999999999999999999999 67789999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCC-------------CCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILK-------------EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|. ++|+|+++|++||++||
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 127 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 127 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHH
Confidence 9999999996 78999999999999997
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-42 Score=237.19 Aligned_cols=107 Identities=50% Similarity=0.904 Sum_probs=101.0
Q ss_pred ChHHHHHHHHHHHhcCCC-------------CCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeE
Q 033943 1 MASKRILKELKDLQKDPP-------------TSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKV 67 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v 67 (108)
+|.+||++|+++|+++++ .|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 478999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEeecCccceee-CCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 68 AFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 68 ~f~t~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.|+||||||+ .+|.||+++|.++|+|+++|++||++||
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 152 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQ 152 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHH
Confidence 999999999999 5999999999999999999999999997
No 25
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=234.63 Aligned_cols=106 Identities=37% Similarity=0.694 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCcccee-eC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI-NS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv-~~ 80 (108)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCeEEecCCC--CCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILK--EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~--~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|. ++|+|+++|++||++||
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~ 132 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQ 132 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHH
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHH
Confidence 9999999998 89999999999999997
No 26
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.5e-42 Score=230.11 Aligned_cols=106 Identities=44% Similarity=0.851 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCcccee
Q 033943 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (108)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv 78 (108)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 689999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 79 N-SNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+ .+|.||+++|.++|+|+++|++||++||
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~ 118 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQ 118 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHH
Confidence 9 5999999999999999999999999997
No 27
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.6e-42 Score=241.43 Aligned_cols=106 Identities=45% Similarity=0.874 Sum_probs=103.7
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee-C
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (108)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~VL~sI~ 130 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRTALLSIQ 130 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHHHHHHHH
T ss_pred CCEEEchhhcccCCCCCcHHHHHHHHH
Confidence 999999999999999999999999997
No 28
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.8e-42 Score=230.20 Aligned_cols=106 Identities=41% Similarity=0.819 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccc
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-----~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hp 76 (108)
|.+||++|++++++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 78999999999999999999998875 4899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCeEEecCCCC--CCCCcCcHHHHHhhhh
Q 033943 77 NINSNGSICLDILKE--QWSPALTISKMTLWCQ 107 (108)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~iq 107 (108)
||+.+|.||+++|.+ +|+|+++|++||++||
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~ 117 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQ 117 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHH
Confidence 999999999999987 7999999999999997
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=7.3e-42 Score=236.01 Aligned_cols=107 Identities=44% Similarity=0.851 Sum_probs=103.0
Q ss_pred ChHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccce
Q 033943 1 MASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpn 77 (108)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4799999999999987 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 78 IN-SNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 78 v~-~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
|+ .+|.||+++|.++|+|+++|++||++||
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~ 115 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQ 115 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHH
Confidence 99 5999999999999999999999999997
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=5.2e-42 Score=228.40 Aligned_cols=106 Identities=42% Similarity=0.856 Sum_probs=102.6
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEE-eecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~-~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
+|.+||++|+++|++++++|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999999999999 888999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCeEEecCC-CCCCCCcCcHHHHHhhhh
Q 033943 80 SNGSICLDIL-KEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il~~iq 107 (108)
.+|.||+++| .++|+|+++|++||++||
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~ 111 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALN 111 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHH
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHH
Confidence 9999999999 899999999999999997
No 31
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.6e-41 Score=225.98 Aligned_cols=106 Identities=30% Similarity=0.511 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccce
Q 033943 2 ASKRILKELKDLQKDPPTS-CSAGP-VAED--MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-i~~~~-~~~n--~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpn 77 (108)
|.+||++|++++++++++| +++.+ +++| +++|+++|.||++||||||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 6789999999999998888 77876 4454 899999999999999999999999999999999999999999999999
Q ss_pred ee-CCCeEEecCCC--CCCCCcCcHHHHHhhhh
Q 033943 78 IN-SNGSICLDILK--EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~iq 107 (108)
|+ .+|+||+++|. ++|+|+++|++||++||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 138 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 138 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHH
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHH
Confidence 99 69999999998 89999999999999998
No 32
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.6e-41 Score=227.39 Aligned_cols=106 Identities=39% Similarity=0.790 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecC-----CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccc
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~-----~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hp 76 (108)
|.+||++|+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998763 6899999999999999999999999999999999999999999999999
Q ss_pred eeeCCCeEEecCCCC--CCCCcCcHHHHHhhhh
Q 033943 77 NINSNGSICLDILKE--QWSPALTISKMTLWCQ 107 (108)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il~~iq 107 (108)
||+.+|.||+++|.+ +|+|+++|++||++||
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~ 120 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQ 120 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHH
Confidence 999999999999976 7999999999999997
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=3.6e-42 Score=239.45 Aligned_cols=107 Identities=47% Similarity=0.939 Sum_probs=103.0
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCC-cceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n-~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
+|.+||++|++++++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 57899999999999999999999998775 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 80 S-NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
. +|.||+|+|.++|+|++||++||++||
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~ 110 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQ 110 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHH
Confidence 8 999999999999999999999999997
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.5e-41 Score=225.52 Aligned_cols=103 Identities=37% Similarity=0.765 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
|.+||++|++++ ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 567899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~ 110 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQ 110 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHH
Confidence 999999999999999999999999997
No 35
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=8.9e-41 Score=237.11 Aligned_cols=106 Identities=44% Similarity=0.851 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHhcC---CCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCcccee
Q 033943 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (108)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv 78 (108)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 789999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred e-CCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 79 N-SNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+ .+|.||+++|.++|+|+++|++||++||
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 167 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQ 167 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHH
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHH
Confidence 9 5999999999999999999999999997
No 36
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=1.4e-40 Score=223.89 Aligned_cols=105 Identities=32% Similarity=0.661 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeec-CCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~-~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
|.+||++|+++|++++++|+++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 6799999999999999999999854 57899999999 899999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCC------CCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKE------QWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~------~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.+ +|+|+++|++||++||
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~ 126 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLN 126 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHH
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHH
Confidence 99999999975 7999999999999997
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.2e-41 Score=227.37 Aligned_cols=103 Identities=36% Similarity=0.730 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
|.+||++|+++| ++++|+++. ++++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 789999999999 578899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|+++|++||++||
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~ 130 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQ 130 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999997
No 38
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=3.9e-41 Score=223.96 Aligned_cols=106 Identities=37% Similarity=0.817 Sum_probs=99.3
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEe-ecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee
Q 033943 1 MASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~-~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (108)
+|.+||++|+++|++++++|+.+. +.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 478999999999999999999855 46789999999998 9999999999999999999999999999999999999999
Q ss_pred CCCeEEecCCC-CCCCCcCcHHHHHhhhh
Q 033943 80 SNGSICLDILK-EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il~~iq 107 (108)
.+|.||+++|. ++|+|+++|++||++||
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~ 109 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLI 109 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHH
Confidence 99999999996 88999999999999997
No 39
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.6e-40 Score=221.41 Aligned_cols=105 Identities=30% Similarity=0.538 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccce
Q 033943 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (108)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~i~~~~~~-~--n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpn 77 (108)
|.+||++|+++++++ +++++++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 789999999999998 78899998854 2 5999999999999999999999999999999999999999999999999
Q ss_pred eeCCCeE---EecCCCCCCCCcCcHHHHHhhhh
Q 033943 78 INSNGSI---CLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 78 v~~~G~i---cl~~l~~~W~p~~~i~~il~~iq 107 (108)
|+.+|+| |+++|. +|+|+++|++||++||
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~ 133 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIETILISLR 133 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHH
T ss_pred CccCCeEehhhccccc-CCCCcCcHHHHHHHHH
Confidence 9999999 889886 5999999999999997
No 40
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=225.32 Aligned_cols=106 Identities=30% Similarity=0.511 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHHhcCCCCC-eEEee-cCCC--cceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccce
Q 033943 2 ASKRILKELKDLQKDPPTS-CSAGP-VAED--MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-i~~~~-~~~n--~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpn 77 (108)
|.+||++|++++++++++| +++.+ +++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 6899999999999998888 67776 4454 999999999999999999999999999999999999999999999999
Q ss_pred ee-CCCeEEecCCC--CCCCCcCcHHHHHhhhh
Q 033943 78 IN-SNGSICLDILK--EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il~~iq 107 (108)
|+ .+|.||+++|. ++|+|++||++||++||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 148 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 148 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHH
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHH
Confidence 99 79999999997 89999999999999997
No 41
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=2.2e-40 Score=216.90 Aligned_cols=105 Identities=35% Similarity=0.660 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHHhcC-CCCCeEEeecC-C--CcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccce
Q 033943 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (108)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~i~~~~~~-~--n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpn 77 (108)
+.+||++|+++++++ +++++++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 568999999999998 78999998854 3 4999999999999999999999999999999999999999999999999
Q ss_pred eeCC-CeE--EecCCCCCCCCcCcHHHHHhhhh
Q 033943 78 INSN-GSI--CLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 78 v~~~-G~i--cl~~l~~~W~p~~~i~~il~~iq 107 (108)
|+.+ |.| |+++|. +|+|+++|++||++||
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~ 118 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLR 118 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHH
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHH
Confidence 9985 999 999885 8999999999999997
No 42
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4e-40 Score=222.59 Aligned_cols=106 Identities=37% Similarity=0.712 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHhc-C-C------CC---CeEEee-cCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEE
Q 033943 2 ASKRILKELKDLQK-D-P------PT---SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAF 69 (108)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~i~~~~-~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f 69 (108)
|.+||++|+++|++ + + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 68999999999998 5 3 33 467777 78899999999999999999999999999999999999999999
Q ss_pred ee-cCccceee-CCCeEEecCCC-CCCCCcCcHHHHHhhhh
Q 033943 70 RT-KVFHPNIN-SNGSICLDILK-EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 70 ~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il~~iq 107 (108)
.| ++|||||+ .+|.||+++|. ++|+|+++|++||++||
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~ 127 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVW 127 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHH
Confidence 99 99999996 79999999998 89999999999999997
No 43
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5e-41 Score=223.10 Aligned_cols=103 Identities=25% Similarity=0.608 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee-C
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (108)
|.+||++|+++++++ |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 679999999999874 788999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhh-hh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLW-CQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-iq 107 (108)
+|.||+++|.++|+|+++|++||++ ||
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~ 107 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLP 107 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHH
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999998 55
No 44
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=5.8e-40 Score=245.66 Aligned_cols=107 Identities=75% Similarity=1.297 Sum_probs=105.2
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
+|.|||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++|.++|+|++||++||++||
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~ 109 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSIC 109 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CCeEeCcccccCCCccccHHHHHHHHH
Confidence 999999999999999999999999997
No 45
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=2.4e-40 Score=222.74 Aligned_cols=105 Identities=30% Similarity=0.650 Sum_probs=99.6
Q ss_pred ChHHHHHHHHHHHhcCC------------CCCeEEeecCCCcceEEEEEeCCCCCCCC--CCeEEEEEECCCCCCCCCCe
Q 033943 1 MASKRILKELKDLQKDP------------PTSCSAGPVAEDMFHWQATIMGPPDSPYA--GGVFLVSIHFPPDYPFKPPK 66 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~------------~~~i~~~~~~~n~~~w~~~i~gp~~tpy~--g~~f~~~l~fp~~YP~~pP~ 66 (108)
.|.+||++|+++|++++ ..++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+
T Consensus 8 ~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~ 87 (167)
T 4ds2_A 8 ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPT 87 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCE
Confidence 36899999999999877 77899999999999999999999999999 99999999999999999999
Q ss_pred EEEeecCccceeeCCCeEEecCCCCCCCCcCcHHHHHhh
Q 033943 67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMTLW 105 (108)
Q Consensus 67 v~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~ 105 (108)
|+|.|++|||||+.+|.||+++|.++|+|+++++++|++
T Consensus 88 v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~ 126 (167)
T 4ds2_A 88 VRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKL 126 (167)
T ss_dssp EEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHH
T ss_pred EEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHH
Confidence 999999999999999999999999999999999987543
No 46
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-39 Score=221.08 Aligned_cols=105 Identities=29% Similarity=0.665 Sum_probs=95.5
Q ss_pred ChHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC
Q 033943 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (108)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (108)
.|.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCeEEecCC---CCCCCCcCcHHHHHhhhh
Q 033943 81 NGSICLDIL---KEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il~~iq 107 (108)
+|.||+++| .++|+|+++|++||++||
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~ 121 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLL 121 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHH
Confidence 999999999 689999999999999997
No 47
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=223.25 Aligned_cols=102 Identities=27% Similarity=0.695 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeC-
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~- 80 (108)
|.+||++|+++|++ +|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 67999999999985 57888887 67899999999999999999999999999999999999999999999999998
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhh-hh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLW-CQ 107 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~-iq 107 (108)
+|.||+++|.++|+|+++|++||++ ||
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~ 129 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLP 129 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHH
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999 86
No 48
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=3.5e-39 Score=220.92 Aligned_cols=103 Identities=33% Similarity=0.649 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEe----ecCCCcc---eEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCc
Q 033943 2 ASKRILKELKDLQKDPPTSCSAG----PVAEDMF---HWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~----~~~~n~~---~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~ 74 (108)
|.+||++|+++|+ +++++++. ++++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 7899999999998 77899998 8889999 9999997 88899999999999999999999999999999999
Q ss_pred cceeeCCCeEEecCCCCCCCCcCcHHHHHhhhh
Q 033943 75 HPNINSNGSICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 75 Hpnv~~~G~icl~~l~~~W~p~~~i~~il~~iq 107 (108)
||||+.+|.||+++|.++|+|+++|++||++||
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~ 139 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLL 139 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999997
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=8.2e-40 Score=223.39 Aligned_cols=106 Identities=26% Similarity=0.609 Sum_probs=101.7
Q ss_pred hHHHHHHHHHHHhcCC---CCCeEEeecCCCcceEEEEEeCC-CCCCCCC-----------CeEEEEEECCCCCCCCCCe
Q 033943 2 ASKRILKELKDLQKDP---PTSCSAGPVAEDMFHWQATIMGP-PDSPYAG-----------GVFLVSIHFPPDYPFKPPK 66 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~i~~~~~~~n~~~w~~~i~gp-~~tpy~g-----------~~f~~~l~fp~~YP~~pP~ 66 (108)
|.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 7899999999999988 68899999999999999999997 9999998 8999999999999999999
Q ss_pred EEEeecCccc-eeeCCCeEEecCCC-CCCCCcCcHHHHHhhhh
Q 033943 67 VAFRTKVFHP-NINSNGSICLDILK-EQWSPALTISKMTLWCQ 107 (108)
Q Consensus 67 v~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il~~iq 107 (108)
|+|.++++|| ||+.+|+||+|+|. ++|+|+++|++||++||
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~ 150 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQIN 150 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHH
Confidence 9999999999 69999999999997 78999999999999997
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-39 Score=218.43 Aligned_cols=101 Identities=25% Similarity=0.670 Sum_probs=94.7
Q ss_pred hHHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceee-C
Q 033943 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (108)
|.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 56999999999999873 33 3578999999999999999999999999999999999999999999999999999 5
Q ss_pred CCeEEecCCCCCCCCcCcHHHHHhhh
Q 033943 81 NGSICLDILKEQWSPALTISKMTLWC 106 (108)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il~~i 106 (108)
+|.||+|+|.++|+|+++|++||++|
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si 114 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVF 114 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTH
T ss_pred CCeEeccccccCCCCCCcHHHHHHHH
Confidence 99999999999999999999999987
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=227.15 Aligned_cols=106 Identities=34% Similarity=0.647 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHhcCCCCC----eEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeec-----
Q 033943 2 ASKRILKELKDLQKDPPTS----CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTK----- 72 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~----- 72 (108)
|.+||++|+++|+++++++ +.+.+.++|++.|+++|.||++|||+||.|+|+|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 6899999999999987764 5577889999999999999999999999999999999999999999999998
Q ss_pred CccceeeCCCeEEecCCC-------CCCCCcC-cHHHHHhhhh
Q 033943 73 VFHPNINSNGSICLDILK-------EQWSPAL-TISKMTLWCQ 107 (108)
Q Consensus 73 i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il~~iq 107 (108)
+|||||+.+|+||+|+|. ++|+|++ +|++||++||
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIq 199 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQ 199 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHH
Confidence 999999999999999997 6899999 8999999998
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.97 E-value=3.2e-32 Score=181.07 Aligned_cols=96 Identities=18% Similarity=0.297 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCC----------eEEEEEECCCCCCCCCCeEEEeec
Q 033943 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~----------~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
.+||++|++.|++ ++.+.++|++.|.+.+.||++|+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999999 577888999999999999999999999 999999999999999999999998
Q ss_pred -CccceeeCCCeEEecCC-CC---CCCCcCcHHHHHh
Q 033943 73 -VFHPNINSNGSICLDIL-KE---QWSPALTISKMTL 104 (108)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~---~W~p~~~i~~il~ 104 (108)
++|||||.+|+||+|+| .+ .|+|+++|.++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 99999999999999999 43 4569999999983
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.87 E-value=7.4e-24 Score=138.41 Aligned_cols=95 Identities=22% Similarity=0.396 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCC----------eEEEEEECCCCCCCCCCeEEEeec
Q 033943 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~----------~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
.+||..||+.|.+ +++.++++-..|...+.|+++|+|+|+ .|++++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999987 777778888999999999999999999 899999999999999999999995
Q ss_pred -CccceeeCCCeEEecCCC-CCC---CCcCcHHHHH
Q 033943 73 -VFHPNINSNGSICLDILK-EQW---SPALTISKMT 103 (108)
Q Consensus 73 -i~Hpnv~~~G~icl~~l~-~~W---~p~~~i~~il 103 (108)
.+|||++.+|+||+|++. .-| .|.++|.+.|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 899999999999999981 112 4556666654
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.80 E-value=1.2e-19 Score=121.09 Aligned_cols=103 Identities=21% Similarity=0.318 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhcCCC---CCeEEeecCCCcceEEEEEeCCCCCCCCCCe---EEEEEECCCCCCCCCCeEEEeec-----
Q 033943 4 KRILKELKDLQKDPP---TSCSAGPVAEDMFHWQATIMGPPDSPYAGGV---FLVSIHFPPDYPFKPPKVAFRTK----- 72 (108)
Q Consensus 4 ~RL~~E~~~l~~~~~---~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~---f~~~l~fp~~YP~~pP~v~f~t~----- 72 (108)
+|..+|+.++.+.-+ +...+...++...++-+.+.|.-..+|+|+. |.+.|-||++||++||.|.|.++
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567788877755322 2334445566667777777777778999999 88999999999999999988651
Q ss_pred -----Cc-cceeeCCCeEEecCCCCCCCC-cCcHHHHHhhhh
Q 033943 73 -----VF-HPNINSNGSICLDILKEQWSP-ALTISKMTLWCQ 107 (108)
Q Consensus 73 -----i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il~~iq 107 (108)
|+ ||||+.+|+||+++| ++|+| +.++.++|.+|+
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~ 151 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELM 151 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHH
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHH
Confidence 77 999999999999999 56999 689999999886
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.60 E-value=1.1e-15 Score=100.30 Aligned_cols=75 Identities=23% Similarity=0.498 Sum_probs=65.8
Q ss_pred CCCcceEEEEEeCCCCCCCCCCeEEE--EEECCCCCCCCCCeEEEeec------CccceeeCCCeEEecCCCCCCCC-cC
Q 033943 27 AEDMFHWQATIMGPPDSPYAGGVFLV--SIHFPPDYPFKPPKVAFRTK------VFHPNINSNGSICLDILKEQWSP-AL 97 (108)
Q Consensus 27 ~~n~~~w~~~i~gp~~tpy~g~~f~~--~l~fp~~YP~~pP~v~f~t~------i~Hpnv~~~G~icl~~l~~~W~p-~~ 97 (108)
..++..|.++|. .+|+|+.|.+ .|-||++||++||.| |.++ ..||||+.+|+||++.|.+ |++ ..
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCTTTC
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCCCCC
Confidence 357999999998 4899999985 999999999999999 6554 4899999999999999955 987 88
Q ss_pred cHHHHHhhhh
Q 033943 98 TISKMTLWCQ 107 (108)
Q Consensus 98 ~i~~il~~iq 107 (108)
++.+++..++
T Consensus 124 nL~~ll~~l~ 133 (146)
T 3obq_A 124 DLLGLIQVMI 133 (146)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999998876
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.33 E-value=0.0021 Score=40.29 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEee
Q 033943 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (108)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t 71 (108)
.+...|+..|+.--++.+.+. .+....+.+.+....+..-+.-.+.+.+.+|++||.+||.+.+.+
T Consensus 13 e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888876544555442 222355666665322222234578999999999999999998765
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=97.03 E-value=0.0071 Score=37.75 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=42.4
Q ss_pred HHHHHHHHHhcCCCCCeEEeecC--CCcceEEEEEeCCCCCCC--CCCeEEEEEECCCCCCCCCCeEEEeec
Q 033943 5 RILKELKDLQKDPPTSCSAGPVA--EDMFHWQATIMGPPDSPY--AGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 5 RL~~E~~~l~~~~~~~i~~~~~~--~n~~~w~~~i~gp~~tpy--~g~~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
+...|+..|+.--...+.+.... .+...+.+.+..+.+..- ..-.+.+.+.+|++||.++|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 46778888887655555543221 123444555542222111 124788999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.012 Score=37.26 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=42.1
Q ss_pred HHHHHHHHHhcCCCCCeEEeecC------CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeec
Q 033943 5 RILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 5 RL~~E~~~l~~~~~~~i~~~~~~------~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
+...|+..|+.--+..+.+.... .....+.+.+....+ .-..-.+.+.+.+|++||.+||.|.+.+.
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 44567777776544444332110 124567777773222 21234788999999999999999998653
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=96.17 E-value=0.05 Score=36.62 Aligned_cols=80 Identities=15% Similarity=0.241 Sum_probs=57.1
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEeecCccceeeCCCe
Q 033943 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS 83 (108)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t~i~Hpnv~~~G~ 83 (108)
.+|.+|+.++-=+ .+.-.+.++....+.+... .|..+.+++.++.+||.++|.+...-|. |.
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~------ 65 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV--PF------ 65 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS--CC------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC--Cc------
Confidence 3677887777211 2222356788888888732 3578999999999999999987665553 11
Q ss_pred EEecCCCCCCCCcCcHHHHHhhhh
Q 033943 84 ICLDILKEQWSPALTISKMTLWCQ 107 (108)
Q Consensus 84 icl~~l~~~W~p~~~i~~il~~iq 107 (108)
.-.|+|..++.+++.+.+
T Consensus 66 ------~~~w~~~ssL~~v~~qF~ 83 (186)
T 3zqs_A 66 ------CASWTPQSSLISIYSQFL 83 (186)
T ss_dssp ------CCCCCTTCCHHHHHHHHH
T ss_pred ------ccccCCCccHHHHHHHHH
Confidence 136999999999988765
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.97 E-value=0.066 Score=33.57 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhcCCCCCeEEeecCC-----CcceEEEEEeCCCC-C-CCCCCeEEEEEECCCCCCCCCCeEEEee
Q 033943 4 KRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPD-S-PYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (108)
Q Consensus 4 ~RL~~E~~~l~~~~~~~i~~~~~~~-----n~~~w~~~i~gp~~-t-py~g~~f~~~l~fp~~YP~~pP~v~f~t 71 (108)
.+...|+..|+.--.+.+.+..... ......+.+. +.+ . .-..-.+.+.+.||++||.++|.|.+.+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3456788888765444444321111 1345566665 222 1 0012468999999999999999998843
No 61
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.63 E-value=0.062 Score=33.43 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcCCCC--CeEE-eecCCCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEee
Q 033943 5 RILKELKDLQKDPPT--SCSA-GPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (108)
Q Consensus 5 RL~~E~~~l~~~~~~--~i~~-~~~~~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~t 71 (108)
+...|+..|+.--.. .+.+ .....+...+.+.+.. .+..=..-.+.+.+.+|.+||..+|.+.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456688777754222 3332 1112234577777763 2211112478999999999999999987653
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.56 E-value=0.073 Score=34.41 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=21.8
Q ss_pred eEEEEEECCCCCCCCCCeEEEeec
Q 033943 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 49 ~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987764
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.34 E-value=0.056 Score=34.75 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.4
Q ss_pred eEEEEEECCCCCCCCCCeEEEeec
Q 033943 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (108)
Q Consensus 49 ~f~~~l~fp~~YP~~pP~v~f~t~ 72 (108)
.+.+.+.+|.+||.+||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 688999999999999999987764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=73.00 E-value=2.9 Score=18.34 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHhcCCCCCe
Q 033943 3 SKRILKELKDLQKDPPTSC 21 (108)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i 21 (108)
..||+-|+...+.+|+.|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 4689999999999888764
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=48.90 E-value=20 Score=24.16 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.0
Q ss_pred CCCeEEEEEECCCCCCC-----CCCeEEEe
Q 033943 46 AGGVFLVSIHFPPDYPF-----KPPKVAFR 70 (108)
Q Consensus 46 ~g~~f~~~l~fp~~YP~-----~pP~v~f~ 70 (108)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 35889999999999998 89998875
No 66
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=38.67 E-value=15 Score=23.25 Aligned_cols=30 Identities=30% Similarity=0.550 Sum_probs=23.7
Q ss_pred CCCCeEEEee---cCccceeeCCCeEEecCCCC
Q 033943 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKE 91 (108)
Q Consensus 62 ~~pP~v~f~t---~i~Hpnv~~~G~icl~~l~~ 91 (108)
.+||.|.+.- .--|++|..+|..|+++|.+
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 3689888752 34688999999999999964
No 67
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=34.98 E-value=20 Score=16.06 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=7.7
Q ss_pred HHHHHHHHHHhc
Q 033943 4 KRILKELKDLQK 15 (108)
Q Consensus 4 ~RL~~E~~~l~~ 15 (108)
|++++|+..|+.
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 457788888765
No 68
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=32.33 E-value=75 Score=20.59 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=26.0
Q ss_pred CcceEEEEEeCCCCC-------------CCCCCeEEEEEECCCCCCCCCCe
Q 033943 29 DMFHWQATIMGPPDS-------------PYAGGVFLVSIHFPPDYPFKPPK 66 (108)
Q Consensus 29 n~~~w~~~i~gp~~t-------------py~g~~f~~~l~fp~~YP~~pP~ 66 (108)
+-.+|+++..|..++ |..-|.++|.+.-+.=-|..-|.
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~IP~ 86 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQ 86 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGSSC
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHCCC
Confidence 445999999985544 66678899888875444444443
No 69
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=31.98 E-value=1.1e+02 Score=20.07 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=29.1
Q ss_pred CCcceEEEEEeCCCCCCCCCCeEEEEEECCCCCCCCCCeEEEe
Q 033943 28 EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFR 70 (108)
Q Consensus 28 ~n~~~w~~~i~gp~~tpy~g~~f~~~l~fp~~YP~~pP~v~f~ 70 (108)
+.-..|.+.+.|+.+.-...-.=++.+.+.+.||. |.-.+.
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~ 70 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIE 70 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEEC
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEe
Confidence 45789999999976654444566788888999975 444443
No 70
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=30.16 E-value=33 Score=23.65 Aligned_cols=24 Identities=25% Similarity=0.711 Sum_probs=21.1
Q ss_pred CCeEEEEEECCCCCC-------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP-------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP-------~~pP~v~f~ 70 (108)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 135 ~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 135 NGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 588999999999998 479999885
No 71
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=29.53 E-value=34 Score=23.55 Aligned_cols=24 Identities=21% Similarity=0.484 Sum_probs=21.5
Q ss_pred CCeEEEEEECCCCCCC-------CCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYPF-------KPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP~-------~pP~v~f~ 70 (108)
.|.|.|+-.+|--||. .||.|.|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 4889999999999996 79999886
No 72
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=29.08 E-value=33 Score=20.03 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=14.9
Q ss_pred hHHHHHHHHHHHhcCCCC
Q 033943 2 ASKRILKELKDLQKDPPT 19 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~ 19 (108)
..++|++||+.+..++.|
T Consensus 30 tl~~L~~DYr~l~G~~iP 47 (89)
T 3rco_A 30 ALPRLQGEYRSLTGDWIP 47 (89)
T ss_dssp EHHHHHHHHHHHHSSCCC
T ss_pred CHHHHHHHHHHHhCCcCC
Confidence 467999999999887665
No 73
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=28.97 E-value=35 Score=24.47 Aligned_cols=24 Identities=21% Similarity=0.497 Sum_probs=20.6
Q ss_pred CCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 188 ~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 188 NGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 488999999999998 568998875
No 74
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=28.64 E-value=42 Score=17.77 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=8.6
Q ss_pred EEEECCCCCCC
Q 033943 52 VSIHFPPDYPF 62 (108)
Q Consensus 52 ~~l~fp~~YP~ 62 (108)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46678999984
No 75
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=28.12 E-value=41 Score=14.57 Aligned_cols=11 Identities=55% Similarity=0.625 Sum_probs=7.5
Q ss_pred HHHHHHHHHHH
Q 033943 3 SKRILKELKDL 13 (108)
Q Consensus 3 ~~RL~~E~~~l 13 (108)
++.+.+|+++-
T Consensus 10 qkkirkelkqr 20 (26)
T 1m46_B 10 QKKIRKELKQR 20 (26)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 46677888654
No 76
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=27.95 E-value=43 Score=22.35 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=20.7
Q ss_pred CeEEEEEECCCCCCCC-----CCeEEEe
Q 033943 48 GVFLVSIHFPPDYPFK-----PPKVAFR 70 (108)
Q Consensus 48 ~~f~~~l~fp~~YP~~-----pP~v~f~ 70 (108)
|.|.|+-.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 8888775
No 77
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=27.63 E-value=38 Score=24.28 Aligned_cols=24 Identities=25% Similarity=0.445 Sum_probs=20.7
Q ss_pred CCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 488999999999998 459999885
No 78
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=27.57 E-value=39 Score=24.02 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=21.1
Q ss_pred CCCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 46 ~g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 3588999999999998 459998875
No 79
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=27.39 E-value=13 Score=23.15 Aligned_cols=31 Identities=26% Similarity=0.574 Sum_probs=24.2
Q ss_pred CCCCeEEEee---cCccceeeCCCeEEecCCCCC
Q 033943 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKEQ 92 (108)
Q Consensus 62 ~~pP~v~f~t---~i~Hpnv~~~G~icl~~l~~~ 92 (108)
.+||.|.+.- .--|++|..+|..|+++|.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 4789988762 345889999999999999654
No 80
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=26.68 E-value=41 Score=23.85 Aligned_cols=24 Identities=29% Similarity=0.715 Sum_probs=20.7
Q ss_pred CCeEEEEEECCCCCCC------------------CCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYPF------------------KPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP~------------------~pP~v~f~ 70 (108)
.|.|.|+-.+|--||. .||.|.|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 4889999999999994 68998875
No 81
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=25.65 E-value=13 Score=16.22 Aligned_cols=9 Identities=33% Similarity=0.892 Sum_probs=4.2
Q ss_pred EEeecCccc
Q 033943 68 AFRTKVFHP 76 (108)
Q Consensus 68 ~f~t~i~Hp 76 (108)
.|..+.|||
T Consensus 11 yfserpyhp 19 (26)
T 2jrw_A 11 YFSERPYHP 19 (26)
T ss_dssp SCCSSSCCS
T ss_pred hcccCCCCC
Confidence 344444554
No 82
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=25.33 E-value=1.2e+02 Score=19.44 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=22.1
Q ss_pred CcceEEEEEeCCCCC-------------CCCCCeEEEEEECCC
Q 033943 29 DMFHWQATIMGPPDS-------------PYAGGVFLVSIHFPP 58 (108)
Q Consensus 29 n~~~w~~~i~gp~~t-------------py~g~~f~~~l~fp~ 58 (108)
+-.+|+++..|..++ |-.-|.++|.+.-+.
T Consensus 37 ~dlewkliYVgSa~s~~~DQ~Ld~v~vGPi~~G~~kFv~~adp 79 (155)
T 1roc_A 37 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADP 79 (155)
T ss_dssp SCEEEEEEECCCTTSSCTTEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCCcccCceEeeEEEeccccceeEEEEEEcCC
Confidence 458999999885544 556688888888744
No 83
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=25.26 E-value=46 Score=23.10 Aligned_cols=24 Identities=21% Similarity=0.571 Sum_probs=20.2
Q ss_pred CCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
.|.|.|+-.+|-.|| ..||.|.|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 488999999999987 468998875
No 84
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=25.15 E-value=1.3e+02 Score=18.91 Aligned_cols=43 Identities=16% Similarity=0.336 Sum_probs=31.1
Q ss_pred cceEE--EEEeCCCCCCCC-CCeEEEEEECCCCCCCCCCeEEEeecCc
Q 033943 30 MFHWQ--ATIMGPPDSPYA-GGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (108)
Q Consensus 30 ~~~w~--~~i~gp~~tpy~-g~~f~~~l~fp~~YP~~pP~v~f~t~i~ 74 (108)
+..|. +.+.|+++.... .-.=++.+.+-+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 57998 889998887654 455668888888887 47766665533
No 85
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=24.23 E-value=19 Score=23.46 Aligned_cols=31 Identities=19% Similarity=0.424 Sum_probs=24.0
Q ss_pred CCCCeEEEee---cCccceeeCCCeEEecCCCCC
Q 033943 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKEQ 92 (108)
Q Consensus 62 ~~pP~v~f~t---~i~Hpnv~~~G~icl~~l~~~ 92 (108)
.+||.|.+.- .--|.+|..+|..|+++|.++
T Consensus 57 ~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 57 LSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp TTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred CCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 4789988863 235789999999999999643
No 86
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=24.23 E-value=47 Score=23.79 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=20.6
Q ss_pred CCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 488999999999997 468998875
No 87
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=23.69 E-value=33 Score=22.08 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=24.0
Q ss_pred CCCCCeEEEe---ecCccceeeCCCeEEecCCC
Q 033943 61 PFKPPKVAFR---TKVFHPNINSNGSICLDILK 90 (108)
Q Consensus 61 P~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~ 90 (108)
-.+||.|.+. +.--|++|..+|..|+++|.
T Consensus 59 S~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 59 SLNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp ETTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred cCCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 3478998876 23568999999999999985
No 88
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=22.99 E-value=16 Score=22.96 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=23.4
Q ss_pred CCCeEEEe---ecCccceeeCCCeEEecCCCCC
Q 033943 63 KPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (108)
Q Consensus 63 ~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~~ 92 (108)
+||.|.+. +.--|++|..+|..|+++|.++
T Consensus 44 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 76 (158)
T 2r0x_A 44 SPPTLLVCINSNARAYEHFVKNRVLMVNTLTAE 76 (158)
T ss_dssp TTEEEEEEEETTSTTHHHHHHHCEEEEEECBTT
T ss_pred CCCEEEEEeCCCChHHHHHHhCCEEEEEeCCHH
Confidence 67888775 2345889999999999999643
No 89
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=22.92 E-value=47 Score=23.48 Aligned_cols=24 Identities=17% Similarity=0.494 Sum_probs=20.0
Q ss_pred CCeEEEEEECCCCCC------------------CCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~YP------------------~~pP~v~f~ 70 (108)
.|.|.|+-.+|-.|| ..||.|.|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 488999999998887 468888875
No 90
>2qck_A Flavin reductase domain protein; YP_831077.1, flavin reducta domain, structural genomics, joint center for structural GE JCSG; 1.90A {Arthrobacter SP}
Probab=22.76 E-value=20 Score=22.87 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=23.7
Q ss_pred CCCCeEEEee---cCccceeeCCCeEEecCCCC
Q 033943 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKE 91 (108)
Q Consensus 62 ~~pP~v~f~t---~i~Hpnv~~~G~icl~~l~~ 91 (108)
.+||.|.+.- .--|++|..+|..|+++|.+
T Consensus 48 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 80 (167)
T 2qck_A 48 AQPPRFTFNMARSSSSWPAIANTTHIGVHMLGL 80 (167)
T ss_dssp ETTEEEEEEEETTSTTHHHHHHCCEEEEEECBG
T ss_pred cCCCEEEEEECCCCchHHHHHhCCeEEEEECcH
Confidence 4789988762 34688999999999999954
No 91
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=21.86 E-value=66 Score=15.81 Aligned_cols=12 Identities=42% Similarity=0.603 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHh
Q 033943 3 SKRILKELKDLQ 14 (108)
Q Consensus 3 ~~RL~~E~~~l~ 14 (108)
.+|+.+|++.+.
T Consensus 30 ~~~~~~~~~~~~ 41 (42)
T 3g9r_A 30 IKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 578889988775
No 92
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=21.80 E-value=93 Score=17.12 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhcCCCCCeEEeecCC
Q 033943 3 SKRILKELKDLQKDPPTSCSAGPVAE 28 (108)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~i~~~~~~~ 28 (108)
..|+..|++++++....-+++.|..+
T Consensus 33 y~rms~emQrI~r~GGkIvSItp~~~ 58 (67)
T 1b33_N 33 YENWFREQQRIQKMGGKIVKVELATG 58 (67)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred HHHHhHHHHHHHHcCCeEEEEEECCC
Confidence 46899999999998777777777654
No 93
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=21.75 E-value=61 Score=19.18 Aligned_cols=19 Identities=11% Similarity=0.022 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHhcCCCCC
Q 033943 2 ASKRILKELKDLQKDPPTS 20 (108)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~ 20 (108)
..++|++||+++..++.|.
T Consensus 28 tl~~L~~dYr~~~G~~iP~ 46 (102)
T 3s93_A 28 SPQELEKEYLLMVGNHLPL 46 (102)
T ss_dssp CHHHHHHHHHHHHSSCCCT
T ss_pred CHHHHHHHHHHHcCCcCCc
Confidence 4678999999998876653
No 94
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=21.54 E-value=17 Score=22.72 Aligned_cols=31 Identities=29% Similarity=0.519 Sum_probs=23.3
Q ss_pred CCCCeEEEee---cCccceeeCCCeEEecCCCCC
Q 033943 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKEQ 92 (108)
Q Consensus 62 ~~pP~v~f~t---~i~Hpnv~~~G~icl~~l~~~ 92 (108)
.+||.|.+.- .--|+||..+|..|++++.++
T Consensus 41 ~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (159)
T 1yoa_A 41 FQPPLVAVGLKRDSHLHALVERTGKLALMTLAHD 74 (159)
T ss_dssp TTTTEEEEEEESSSHHHHHHHHHCEEEEEECBTT
T ss_pred cCCCEEEEEECCCCchHHHHHhCCeEEEEECchh
Confidence 3678887752 345789999999999999643
No 95
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=20.83 E-value=98 Score=21.54 Aligned_cols=24 Identities=29% Similarity=0.699 Sum_probs=19.2
Q ss_pred CCeEEEEEECCCCC------------------CCCCCeEEEe
Q 033943 47 GGVFLVSIHFPPDY------------------PFKPPKVAFR 70 (108)
Q Consensus 47 g~~f~~~l~fp~~Y------------------P~~pP~v~f~ 70 (108)
.|.|.|+=.+|--| |..||.|.|.
T Consensus 151 ~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 151 QGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 37899999999766 4567888875
No 96
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=20.04 E-value=1.1e+02 Score=18.50 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=21.9
Q ss_pred EEEEEeCCCCCCCCCCeEEEEEECCC
Q 033943 33 WQATIMGPPDSPYAGGVFLVSIHFPP 58 (108)
Q Consensus 33 w~~~i~gp~~tpy~g~~f~~~l~fp~ 58 (108)
.|+.+.|.+...=+|..+.++|.|-+
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 68888888887888999999999954
No 97
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=20.03 E-value=1.8e+02 Score=19.16 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=22.3
Q ss_pred CcceEEEEEeCCCCC-------------CCCCCeEEEEEECCC
Q 033943 29 DMFHWQATIMGPPDS-------------PYAGGVFLVSIHFPP 58 (108)
Q Consensus 29 n~~~w~~~i~gp~~t-------------py~g~~f~~~l~fp~ 58 (108)
+-.+|+++..|..++ |..-|.++|.+.-+.
T Consensus 38 ~dleWkliYVgSa~s~~~DQ~Ldsv~VGPi~~G~~kFv~~adp 80 (179)
T 2idc_A 38 HDLEWKLTYVGSSRSLDHDQELDSILVGPVPVGVNKFVFSADP 80 (179)
T ss_dssp SCEEEEEEECSCTTCGGGCEEEEEEEECSCCSEEEEEEEEECC
T ss_pred CCcEEEEEEEcCCCcccCCeEeeEEEECCccceeEEEEEEcCC
Confidence 458999999985554 666788888888743
Done!