BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033948
(108 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZCG2|MPC1_BOVIN Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1
Length = 109
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A + D+KK PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83
Query: 76 HASNETVQLYHLSRWARSQ 94
HA+NE QL R R +
Sbjct: 84 HATNEVAQLIQGGRLIRHE 102
>sp|Q9Y5U8|MPC1_HUMAN Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1
Length = 109
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 58/79 (73%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A + D+KK PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83
Query: 76 HASNETVQLYHLSRWARSQ 94
HA+NE QL R + +
Sbjct: 84 HATNEVAQLIQGGRLIKHE 102
>sp|P63031|MPC1_RAT Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1
PE=2 SV=1
Length = 109
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A + D+KK PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83
Query: 76 HASNETVQLYHLSR 89
H +NE QL R
Sbjct: 84 HVTNEVAQLIQGGR 97
>sp|P63030|MPC1_MOUSE Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1
SV=1
Length = 109
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A + D+KK PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83
Query: 76 HASNETVQLYHLSR 89
H +NE QL R
Sbjct: 84 HVTNEVAQLIQGGR 97
>sp|Q21828|MPC2_CAEEL Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans
GN=R07E5.13 PE=3 SV=2
Length = 137
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A L DLKK P+MISG MT+A+ IYS +FMRFAW VQPRN LL AC
Sbjct: 26 STHFWGPVANWGLPLAALGDLKKNPDMISGPMTSALLIYSSVFMRFAWHVQPRNLLLFAC 85
Query: 76 HASNETVQLYHLSRWARSQGYL 97
H +N + Q L R+ + YL
Sbjct: 86 HFANFSAQGAQLGRFV-NHNYL 106
>sp|O74847|MPC2_SCHPO Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1235.11 PE=3 SV=3
Length = 141
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGP++N+G +A ++DLKK P +ISG MT A+ +YS +FMR+AWMV PRNYLLL C
Sbjct: 34 STHFWGPLSNFGIPIAAILDLKKDPRLISGRMTGALILYSSVFMRYAWMVSPRNYLLLGC 93
Query: 76 HASNETVQ 83
HA N TVQ
Sbjct: 94 HAFNTTVQ 101
>sp|Q7KSC4|MPC1_DROME Mitochondrial pyruvate carrier 1 OS=Drosophila melanogaster
GN=Mpc1 PE=3 SV=1
Length = 107
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 53/68 (77%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG VA L D +K P+ ISG MT A+ +YS +FMRFA+ VQPRN+LL AC
Sbjct: 21 STHFWGPVANWGIPVAALADTQKSPKFISGKMTLALTLYSCIFMRFAYKVQPRNWLLFAC 80
Query: 76 HASNETVQ 83
HA+N T Q
Sbjct: 81 HATNATAQ 88
>sp|P53157|MPC1_YEAST Mitochondrial pyruvate carrier 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FMP37 PE=1 SV=1
Length = 130
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
TTHFWGPV+N+G +A + DLKK P +ISG MT A+ YSG+FM++A V P+NYLL C
Sbjct: 28 TTHFWGPVSNFGIPIAAIYDLKKDPTLISGPMTFALVTYSGVFMKYALSVSPKNYLLFGC 87
Query: 76 HASNETVQLYHLSRWARSQGYLSEKKK 102
H NET QL R+ + + ++++K
Sbjct: 88 HLINETAQLAQGYRFLKYTYFTTDEEK 114
>sp|P0DKB6|MPC1L_HUMAN Mitochondrial pyruvate carrier 1-like protein OS=Homo sapiens
GN=MPC1L PE=2 SV=1
Length = 136
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGP +WG +A D+K PE+ISG MTTA+ +YS +FMRFA+ VQPRN LL+AC
Sbjct: 26 STHFWGPAFSWGLPLAAFKDMKASPEIISGRMTTALILYSAIFMRFAYRVQPRNLLLMAC 85
Query: 76 HASNETVQLYHLSR 89
H +N Q SR
Sbjct: 86 HCTNVMAQSVQASR 99
>sp|Q2M2T3|MPCX_BOVIN Mitochondrial pyruvate carrier-like protein OS=Bos taurus PE=2 SV=1
Length = 181
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%)
Query: 16 TTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLAC 75
+THFWGPVANWG +A D++ P++ISG MTTA+ YS FMRFA+ VQPRN LL+AC
Sbjct: 26 STHFWGPVANWGLPLAAFRDMRASPDIISGRMTTALIFYSMAFMRFAYRVQPRNLLLMAC 85
Query: 76 HASNETVQLYHLSRW 90
H +N Q R+
Sbjct: 86 HGTNIVAQSMQAGRY 100
>sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=FMP43 PE=1 SV=1
Length = 146
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 3 SVRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFA 62
+ R FWNS GPKT HFW P WG V AGL D+K+P E +SG ++ + ++ R++
Sbjct: 9 AFRRFWNSETGPKTVHFWAPTLKWGLVFAGLNDIKRPVEKVSGAQNLSLLATALIWTRWS 68
Query: 63 WMVQPRNYLLLACHASNETVQLYHLSRWA 91
++++P+NYLL + + YHL+R A
Sbjct: 69 FVIKPKNYLLASVNFFLGCTAGYHLTRIA 97
>sp|Q55GU4|MPC1_DICDI Probable mitochondrial pyruvate carrier 1 OS=Dictyostelium
discoideum GN=DDB_G0267508 PE=3 SV=2
Length = 97
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 15 KTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLLLA 74
K F G ANW +A ++LK PE + MTT + +YS +FMR+A + P NY LL
Sbjct: 7 KMVGFLGAAANWTIPIASFMNLKNDPEKVDPIMTTTLAVYSAVFMRWAIAIYPPNYWLLG 66
Query: 75 CHASNETVQLYHLSRWARSQGYLSEKKKDE 104
CH +NE QL L R+ + + + S+++ D+
Sbjct: 67 CHVANEVAQLTQLGRYGKWKVFDSKQESDK 96
>sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR162W PE=1 SV=1
Length = 129
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 5 RAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWM 64
R FW S GPKT HFW P WG V AG D+K+P E ISG ++ + ++ R++++
Sbjct: 11 RRFWQSETGPKTVHFWAPTLKWGLVFAGFSDMKRPVEKISGAQNLSLLSTALIWTRWSFV 70
Query: 65 VQPRNYLLLACHASNETVQLYHLSRWA 91
++PRN LL + ++ Y L R A
Sbjct: 71 IKPRNILLASVNSFLCLTAGYQLGRIA 97
>sp|Q09896|MPC1_SCHPO Probable mitochondrial pyruvate carrier 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC24B11.09 PE=3
SV=1
Length = 118
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 2 ASVRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRF 61
A + FWN P GPKT HFW P W V++G+ D + PE +S A+C ++ R+
Sbjct: 4 AGFKRFWNHPAGPKTVHFWAPAMKWTLVLSGIGDYARSPEYLSIRQYAALCATGAIWTRW 63
Query: 62 AWMVQPRNYL 71
+ +V+P+NY
Sbjct: 64 SLIVRPKNYF 73
>sp|Q9D023|MPC2_MOUSE Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1
Length = 127
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 8 WNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQP 67
+N P GP+T FW P+ WG V AGL D+ +P E +S +T + ++ R++ ++ P
Sbjct: 32 YNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIP 91
Query: 68 RNYLLLACH---ASNETVQLYHLSRW 90
+N+ L A + S QL+ + R+
Sbjct: 92 KNWSLFAVNFFVGSAGASQLFRIWRY 117
>sp|O95563|MPC2_HUMAN Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1
Length = 127
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 4 VRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAW 63
+R +N P GP+T FW P+ WG V AGL D+ +P E +S + + ++ R++
Sbjct: 28 LRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSL 87
Query: 64 MVQPRNYLLLACH 76
++ P+N+ L A +
Sbjct: 88 VIIPKNWSLFAVN 100
>sp|P38718|MPC2_RAT Mitochondrial pyruvate carrier 2 OS=Rattus norvegicus GN=Mpc2 PE=2
SV=1
Length = 127
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 8 WNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAWMVQP 67
+N P GP+T FW P+ WG V AGL D+ +P E +S +T + ++ R++ ++ P
Sbjct: 32 YNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSTVLMATGFIWSRYSLVIIP 91
Query: 68 RNYLLLACH 76
+N+ L A +
Sbjct: 92 KNWSLFAVN 100
>sp|Q5R4Z3|MPC2_PONAB Mitochondrial pyruvate carrier 2 OS=Pongo abelii GN=MPC2 PE=2 SV=1
Length = 127
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 4 VRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRFAW 63
+R +N P GP+T FW P+ G V AGL D+ +P E +S + + ++ R++
Sbjct: 28 LRPLYNHPAGPRTVFFWAPIMKRGLVCAGLADMARPAEKLSTAQSAVLMATGFIWSRYSL 87
Query: 64 MVQPRNYLLLACH 76
++ P+N+ L A +
Sbjct: 88 VIIPKNWSLFAVN 100
>sp|O01578|MPC1_CAEEL Probable mitochondrial pyruvate carrier 1 OS=Caenorhabditis
elegans GN=F53F10.3 PE=3 SV=2
Length = 133
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 2 ASVRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMRF 61
A + WN GPKT FW P W + AGL DL +P + +S +A+ ++ R+
Sbjct: 25 AFAKPAWNHAAGPKTVFFWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIWTRY 84
Query: 62 AWMVQPRNYLL 72
++ P NY L
Sbjct: 85 CLVITPINYYL 95
>sp|P55101|INHA_HORSE Inhibin alpha chain OS=Equus caballus GN=INHA PE=2 SV=1
Length = 367
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 1 MASVRAFWNSPVGPKTTHFWGPVANWGFVVAGLVDLKKPPEMISGNMTTAMCIYSGLFMR 60
+A RA P G + T P W + A L L++PPE + + A C + L +
Sbjct: 217 VAHTRA--RPPSGGERTRRSTPPLPWPWSPAALRLLQRPPEEPAAH---ANCHRAALNIS 271
Query: 61 FA------WMVQPRNYLLLACHA 77
F W+V PR+++ CH
Sbjct: 272 FQELGWDRWIVHPRSFIFHYCHG 294
>sp|Q5W770|TAF1B_ORYSJ TATA box-binding protein-associated factor RNA polymerase I subunit
B OS=Oryza sativa subsp. japonica GN=Os05g0352700 PE=3
SV=2
Length = 634
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 37 KKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLL----LACHASNETVQLYHLSRWA 91
K + G+ + Y LF+R M+ P L LACH + ET+ + RWA
Sbjct: 199 KDKQSELEGDAQKSQSSYEFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWA 257
>sp|B8AX23|TAF1B_ORYSI TATA box-binding protein-associated factor RNA polymerase I subunit
B OS=Oryza sativa subsp. indica GN=OsI_19584 PE=3 SV=1
Length = 634
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 37 KKPPEMISGNMTTAMCIYSGLFMRFAWMVQPRNYLL----LACHASNETVQLYHLSRWA 91
K + G+ + Y LF+R M+ P L LACH + ET+ + RWA
Sbjct: 199 KDKQSELEGDAQKSQSSYEFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWA 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.131 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,613,663
Number of Sequences: 539616
Number of extensions: 1416027
Number of successful extensions: 2351
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2331
Number of HSP's gapped (non-prelim): 24
length of query: 108
length of database: 191,569,459
effective HSP length: 76
effective length of query: 32
effective length of database: 150,558,643
effective search space: 4817876576
effective search space used: 4817876576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)