BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033949
MFFFFVGGVNQQVSRVLKSGAGRCINCGSTADLVEYEKVLKAFFVPVWKWPAKEPALFCN
NCNLLFPSSLPPPPPPPPLVSDVSKCRFCDRLVEPDFSFCPYCGSAL

High Scoring Gene Products

Symbol, full name Information P value
AT1G44414 protein from Arabidopsis thaliana 3.9e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033949
        (107 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2823681 - symbol:AT1G44414 "AT1G44414" species...   314  3.9e-28   1


>TAIR|locus:2823681 [details] [associations]
            symbol:AT1G44414 "AT1G44414" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006457 "protein folding" evidence=RCA]
            [GO:0009408 "response to heat" evidence=RCA] [GO:0009644 "response
            to high light intensity" evidence=RCA] [GO:0042542 "response to
            hydrogen peroxide" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC084807 EMBL:BT011711
            IPI:IPI00518768 RefSeq:NP_175087.1 UniGene:At.49952 IntAct:Q94LA6
            EnsemblPlants:AT1G44414.1 GeneID:841028 KEGG:ath:AT1G44414
            TAIR:At1g44414 eggNOG:NOG269148 HOGENOM:HOG000239075
            InParanoid:Q94LA6 OMA:MFFFFVG PhylomeDB:Q94LA6
            ProtClustDB:CLSN2679844 Genevestigator:Q94LA6 Uniprot:Q94LA6
        Length = 101

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 58/97 (59%), Positives = 71/97 (73%)

Query:    11 QQVSRVLKSGAGRCINCGSTADLVEYEKVLKAFFVPVWKWPAKEPALFCNNCNLLFXXXX 70
             QQV +VLKSGAG CI CGS ADLVEY+KV+K FFVPVW+WP K+P L C +C+L F    
Sbjct:    11 QQVRQVLKSGAGTCIRCGSQADLVEYDKVIKLFFVPVWRWPGKDPLLHCRDCDLFFPQSL 70

Query:    71 XXXXXXXXXVSDVSKCRFCDRLVEPDFSFCPYCGSAL 107
                      VS ++ CRFCDR+VEP+F FCP+CGS+L
Sbjct:    71 SPPP-----VS-LATCRFCDRVVEPEFRFCPFCGSSL 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.140   0.481    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      107        86   0.00091  102 3  11 22  0.39    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  554 (59 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.24u 0.14s 8.38t   Elapsed:  00:00:01
  Total cpu time:  8.24u 0.14s 8.38t   Elapsed:  00:00:01
  Start:  Fri May 10 09:17:33 2013   End:  Fri May 10 09:17:34 2013

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