BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033951
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FUP0|OPR3_ARATH 12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3
PE=1 SV=2
Length = 391
Score = 85.9 bits (211), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAPMTRCRALNG+P ALA YY QR+TPGGFLISEGT VSP + G+
Sbjct: 26 RVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGF 74
>sp|Q6Z965|OPR7_ORYSJ 12-oxophytodienoate reductase 7 OS=Oryza sativa subsp. japonica
GN=OPR7 PE=2 SV=1
Length = 394
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAPMTRCRA+ G+PGPALA YY QR+T GG LISEGT VSP PG+
Sbjct: 30 RVVLAPMTRCRAIGGVPGPALAEYYAQRTTQGGLLISEGTVVSPAGPGF 78
>sp|C5H429|DBR2_ARTAN Artemisinic aldehyde Delta(11(13)) reductase OS=Artemisia annua
GN=DBR2 PE=1 SV=1
Length = 387
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAPMTRCRA+N IP AL YY+QRST GGFLI+EGT +SP++ G+
Sbjct: 21 RVVLAPMTRCRAINAIPNEALVEYYRQRSTAGGFLITEGTMISPSSAGF 69
>sp|Q9FEW9|OPR3_SOLLC 12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3
PE=1 SV=1
Length = 396
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAPMTRCRALN IP AL YY+QR+T GGFLI+EGT +SPT+ G+
Sbjct: 26 RVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGF 74
>sp|Q84QK0|OPR1_ORYSJ 12-oxophytodienoate reductase 1 OS=Oryza sativa subsp. japonica
GN=OPR1 PE=2 SV=1
Length = 380
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TRCR+ +P P A YY QR+T GG LI+E T +SPTA GY
Sbjct: 30 RVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISPTAQGY 78
>sp|Q69TH4|OPR2_ORYSJ Putative 12-oxophytodienoate reductase 2 OS=Oryza sativa subsp.
japonica GN=OPR2 PE=3 SV=1
Length = 376
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TRCR+ +P P A YY QR+T GG LI+E T +SPTA GY
Sbjct: 26 RVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLLIAEATVISPTAQGY 74
>sp|Q8LAH7|OPR1_ARATH 12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1
PE=1 SV=2
Length = 372
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/49 (63%), Positives = 36/49 (73%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ +P P A YY QR+TPGGFLI+E T VS TA GY
Sbjct: 26 RVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGY 74
>sp|Q69TI2|OPR6_ORYSJ Putative 12-oxophytodienoate reductase 6 OS=Oryza sativa subsp.
japonica GN=OPR6 PE=2 SV=1
Length = 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RV+LAPMTRCR+ +P P A YY QR+T GG LI+E T VS TA GY
Sbjct: 37 RVLLAPMTRCRSYGNVPQPHAALYYTQRATRGGLLITEATGVSATAQGY 85
>sp|Q69TH6|OPR3_ORYSJ Putative 12-oxophytodienoate reductase 3 OS=Oryza sativa subsp.
japonica GN=OPR3 PE=3 SV=1
Length = 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TRCR+ + +P P A YY QR+T GG LISE T VS T GY
Sbjct: 32 RVVLAPLTRCRSYDHVPQPHAALYYSQRATNGGLLISEATGVSATGEGY 80
>sp|Q69TI0|OPR5_ORYSJ Putative 12-oxophytodienoate reductase 5 OS=Oryza sativa subsp.
japonica GN=OPR5 PE=2 SV=1
Length = 374
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RV+L+PMTRCR+ +P P A YY QR+T GG LI+E T VS TA GY
Sbjct: 25 RVLLSPMTRCRSYGNVPQPHAALYYTQRATSGGLLITEATGVSDTAQGY 73
>sp|Q8GYA3|OPRL1_ARATH Putative 12-oxophytodienoate reductase-like protein 1
OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 34/49 (69%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
R+V+APM R R+ IP P +A YY QR+TPGG LISE T VS TA Y
Sbjct: 9 RIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAY 57
>sp|Q8GYB8|OPR2_ARATH 12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2
PE=2 SV=2
Length = 374
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR ++ +P P YY QR++PGGFLI+E T VS TA GY
Sbjct: 28 RVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQGY 76
>sp|B9FSC8|OPR11_ORYSJ Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp.
japonica GN=OPR11 PE=2 SV=1
Length = 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ +P P YYQQR+T GG LI+E T +S TA GY
Sbjct: 21 RVVLAPLTRQRSYGNVPQPHAILYYQQRTTKGGLLIAEATGISDTAQGY 69
>sp|Q69TH8|OPR4_ORYSJ Putative 12-oxophytodienoate reductase 4 OS=Oryza sativa subsp.
japonica GN=OPR4 PE=2 SV=1
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ +P P YY QR+T GG L++E T VS TA GY
Sbjct: 31 RVVLAPLTRNRSYGNVPRPHAVLYYTQRATSGGLLVTEATGVSDTAQGY 79
>sp|P0DI09|ORL2B_ARATH Putative 12-oxophytodienoate reductase-like protein 2B
OS=Arabidopsis thaliana GN=At1g18020 PE=3 SV=1
Length = 269
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ IP P YY QR+TPGG LISE VS T+ GY
Sbjct: 23 RVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGY 71
>sp|P0DI08|ORL2A_ARATH Putative 12-oxophytodienoate reductase-like protein 2A
OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1
Length = 269
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ IP P YY QR+TPGG LISE VS T+ GY
Sbjct: 23 RVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGY 71
>sp|Q0E0C6|OPR8_ORYSJ Putative 12-oxophytodienoate reductase 8 OS=Oryza sativa subsp.
japonica GN=OPR8 PE=2 SV=1
Length = 406
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 32/49 (65%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVV AP+TR R N +P + YY QR+T GG LI+E T VS TA GY
Sbjct: 62 RVVHAPLTRSRCYNNLPQEHVQLYYSQRATNGGLLIAEATGVSETAQGY 110
>sp|Q9XG54|OPR1_SOLLC 12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1
PE=1 SV=1
Length = 376
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 31/49 (63%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
RVVLAP+TR R+ IP P +Y QRST GG LI E T +S T GY
Sbjct: 30 RVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGY 78
>sp|B9FFD3|OPR13_ORYSJ Putative 12-oxophytodienoate reductase 13 OS=Oryza sativa subsp.
japonica GN=OPR13 PE=2 SV=1
Length = 376
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAP 100
R+VLAP+TR R+ +P YY QR+T GG LISE T VS AP
Sbjct: 20 RIVLAPLTRARSYGNLPQSHAILYYSQRATKGGLLISEATGVSSDAP 66
>sp|B9FFD2|OPR12_ORYSJ Putative 12-oxophytodienoate reductase 12 OS=Oryza sativa subsp.
japonica GN=OPR12 PE=2 SV=2
Length = 406
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPG 101
RVVLAP+TR R+ + +P YY QR+T GG LI+E T VS A G
Sbjct: 36 RVVLAPLTRSRSYDNLPQSHAMEYYSQRATKGGLLIAEATGVSSDAQG 83
>sp|Q5ZC83|OPR9_ORYSJ Putative 12-oxophytodienoate reductase 9 OS=Oryza sativa subsp.
japonica GN=OPR9 PE=2 SV=1
Length = 412
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPG 101
R+V AP++R R+ +P P YY QR+TPG LI+E +AVS A G
Sbjct: 20 RIVHAPVSRFRSYGSMPQPHNLLYYAQRATPGALLIAEASAVSYAALG 67
>sp|Q4WZ70|OYE3_ASPFU Festuclavine dehydrogenase subunit FgaOx3 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=fgaOx3 PE=3 SV=1
Length = 376
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 54 RVVLAPMTRCRAL-NGIPGPALATYYQQR-STPGGFLISEGTAVSPTAPGY 102
R+++AP TR RA G+P P + YY QR S PG LI+E T ++P A GY
Sbjct: 24 RMIMAPTTRFRADGQGVPLPFVQEYYGQRASVPGTLLITEATDITPKAMGY 74
>sp|P77258|NEMA_ECOLI N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA
PE=1 SV=1
Length = 365
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 49 MVVVGRVVLAPMTRCRALN--GIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGY 102
+ R+ +AP+TR R++ IP P +A YY+QR++ G +ISE T +S A GY
Sbjct: 15 ITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISAQAKGY 69
>sp|Q9FEX0|OPRL_SOLLC 12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum
GN=OPR2 PE=2 SV=1
Length = 355
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 54 RVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVS------PTAPG 101
R+V +TR R+ N P L YY QR+T GG +ISE A S P PG
Sbjct: 25 RIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAAAASDISKECPNLPG 78
>sp|Q02899|OYE1_SACPS NADPH dehydrogenase 1 OS=Saccharomyces pastorianus GN=OYE1 PE=1
SV=3
Length = 400
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 54 RVVLAPMTRCRALN--GIPGPALAT-YYQQRST-PGGFLISEGTAVSPTAPGY 102
R V+ P+TR RAL+ IP A YY QR+ PG +I+EG +SP A GY
Sbjct: 31 RAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGY 83
>sp|P41816|OYE3_YEAST NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OYE3 PE=1 SV=2
Length = 400
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 54 RVVLAPMTRCRALN--GIPGPA-LATYYQQRST-PGGFLISEGTAVSPTAPGY 102
R V+ P+TR RA + IP A YY QR+ PG +I+EGT +SP A GY
Sbjct: 31 RAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGY 83
>sp|P40952|KYE1_KLULA Enoate reductase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=KYE1 PE=1 SV=2
Length = 398
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 54 RVVLAPMTRCRALN--GIPGPALAT-YYQQRST-PGGFLISEGTAVSPTAPGY 102
RVV+ +TR RAL+ +P P A YY+QRS PG +I+EG S + GY
Sbjct: 30 RVVMPALTRMRALHPGNVPNPDWAVEYYRQRSQYPGTMIITEGAFPSAQSGGY 82
>sp|Q03558|OYE2_YEAST NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OYE2 PE=1 SV=3
Length = 400
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 54 RVVLAPMTRCRALN--GIPGPALAT-YYQQRST-PGGFLISEGTAVSPTAPGY 102
R V+ P+TR RA + IP A YY QR+ PG +I+EGT SP + GY
Sbjct: 31 RAVIPPLTRMRAQHPGNIPNRDWAVEYYAQRAQRPGTLIITEGTFPSPQSGGY 83
>sp|Q09670|OYEA_SCHPO Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5H10.04 PE=3 SV=1
Length = 382
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 49 MVVVGRVVLAPMTRCRALN-GIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105
M++ R+V APMTR RA + G + YY QRS PG LI++ T V + G+ N
Sbjct: 16 MLLQHRIVHAPMTRLRATDYGKITGLMVEYYSQRSMIPGTLLIADATFVGEKSGGFPNN 74
>sp|Q09671|OYEB_SCHPO Putative NADPH dehydrogenase C5H10.10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC5H10.10 PE=3 SV=1
Length = 392
Score = 33.1 bits (74), Expect = 0.50, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 54 RVVLAPMTRCRAL-NGIPGPALAT-YYQQRST-PGGFLISEGTAVSPTAPGYFRN 105
R+V AP TR R L NG+ L YY+QRS+ PG LI+E + S G F N
Sbjct: 27 RMVHAPATRLRCLDNGLVMTDLVKEYYKQRSSIPGTLLITE-SLFSGAKSGGFSN 80
>sp|B4TMK5|SOPA_SALSV E3 ubiquitin-protein ligase SopA OS=Salmonella schwarzengrund
(strain CVM19633) GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|Q57MS9|SOPA_SALCH E3 ubiquitin-protein ligase SopA OS=Salmonella choleraesuis (strain
SC-B67) GN=sopA PE=3 SV=2
Length = 782
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|Q8ZNR3|SOPA_SALTY E3 ubiquitin-protein ligase SopA OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=sopA PE=1 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|D0ZMG9|SOPA_SALT1 E3 ubiquitin-protein ligase SopA OS=Salmonella typhimurium (strain
14028s / SGSC 2262) GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|B4SX34|SOPA_SALNS E3 ubiquitin-protein ligase SopA OS=Salmonella newport (strain
SL254) GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|B5EX33|SOPA_SALA4 E3 ubiquitin-protein ligase SopA OS=Salmonella agona (strain SL483)
GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|C9X8K0|SOPA_SALTD E3 ubiquitin-protein ligase SopA OS=Salmonella typhimurium (strain
D23580) GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRILP 451
>sp|B4T918|SOPA_SALHS E3 ubiquitin-protein ligase SopA OS=Salmonella heidelberg (strain
SL476) GN=sopA PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 62 RCRALNGIPGPALATYYQQRSTP 84
+C+ N +P PA TYYQQR P
Sbjct: 429 QCQTYNDVPLPAPDTYYQQRLLP 451
>sp|B4MU54|WDR12_DROWI Ribosome biogenesis protein WDR12 homolog OS=Drosophila willistoni
GN=GK23981 PE=3 SV=1
Length = 423
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 6 LLHTIWASSTSLTGQQINTGIYPDMTNL-----SLILL------RIQALSWVCLMVVVGR 54
LLH W S+ ++G+ I TG Y + N+ IL I+A+ W+ L +GR
Sbjct: 104 LLHDDWVSAVKVSGKWILTGCYDNTLNIWTHKGKHILTIPGHTAPIKAVDWISLDNDIGR 163
Query: 55 VV 56
V
Sbjct: 164 FV 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,658,199
Number of Sequences: 539616
Number of extensions: 1326177
Number of successful extensions: 2356
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 41
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)