Query 033951
Match_columns 107
No_of_seqs 115 out of 1037
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 13:35:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hgj_A Chromate reductase; TIM 99.8 1.3E-19 4.3E-24 143.1 5.9 65 40-105 5-71 (349)
2 3l5l_A Xenobiotic reductase A; 99.8 1.1E-19 3.9E-24 144.2 5.6 64 41-105 6-70 (363)
3 3l5a_A NADH/flavin oxidoreduct 99.8 2.3E-19 7.9E-24 145.5 7.1 73 28-105 19-94 (419)
4 3kru_A NADH:flavin oxidoreduct 99.8 1.7E-19 5.8E-24 143.0 5.9 64 41-105 6-71 (343)
5 3gr7_A NADPH dehydrogenase; fl 99.8 1.6E-19 5.5E-24 142.5 5.5 68 33-105 3-73 (340)
6 4gbu_A NADPH dehydrogenase 1; 99.8 2.4E-19 8.3E-24 144.0 6.0 71 30-105 12-86 (400)
7 3tjl_A NADPH dehydrogenase; OL 99.8 4.8E-19 1.7E-23 143.8 6.9 71 29-104 8-80 (407)
8 3gka_A N-ethylmaleimide reduct 99.8 6.3E-19 2.2E-23 140.8 6.0 66 38-105 11-77 (361)
9 4a3u_A NCR, NADH\:flavin oxido 99.8 9.4E-19 3.2E-23 138.8 6.7 66 38-105 3-69 (358)
10 1icp_A OPR1, 12-oxophytodienoa 99.7 2.1E-18 7.1E-23 137.9 6.4 72 29-105 10-81 (376)
11 3aty_A Tcoye, prostaglandin F2 99.7 3.9E-18 1.3E-22 136.7 7.1 67 33-105 5-74 (379)
12 4ab4_A Xenobiotic reductase B; 99.7 2.2E-18 7.6E-23 137.6 5.6 63 41-105 6-69 (362)
13 1z41_A YQJM, probable NADH-dep 99.7 1.1E-17 3.6E-22 131.3 5.8 64 41-105 7-73 (338)
14 2hsa_B 12-oxophytodienoate red 99.7 1.7E-17 5.8E-22 133.8 6.7 64 41-105 20-83 (402)
15 2r14_A Morphinone reductase; H 99.7 1.9E-17 6.5E-22 132.5 5.4 70 30-105 6-75 (377)
16 1vyr_A Pentaerythritol tetrani 99.7 6.3E-17 2.1E-21 128.7 6.7 63 41-105 7-71 (364)
17 2gou_A Oxidoreductase, FMN-bin 99.6 1.6E-16 5.3E-21 126.5 6.2 67 33-105 3-71 (365)
18 1ps9_A 2,4-dienoyl-COA reducta 99.6 2.3E-15 7.9E-20 125.7 5.1 65 40-105 6-71 (671)
19 1o94_A Tmadh, trimethylamine d 99.4 9.9E-14 3.4E-18 117.4 5.4 63 39-104 9-72 (729)
20 3k30_A Histamine dehydrogenase 99.4 1.3E-13 4.6E-18 115.5 5.6 64 38-105 13-78 (690)
21 1vhn_A Putative flavin oxidore 97.2 0.00014 4.7E-09 56.1 2.2 41 49-98 1-42 (318)
22 3b0p_A TRNA-dihydrouridine syn 97.0 0.00039 1.3E-08 54.5 2.9 40 50-96 1-40 (350)
23 1f76_A Dihydroorotate dehydrog 96.8 0.00092 3.1E-08 51.4 3.5 47 41-98 45-92 (336)
24 1tv5_A Dhodehase, dihydroorota 95.7 0.0038 1.3E-07 50.9 1.9 46 42-98 83-129 (443)
25 2e6f_A Dihydroorotate dehydrog 95.4 0.023 7.8E-07 43.0 5.1 47 42-98 5-52 (314)
26 1jub_A Dihydroorotate dehydrog 95.0 0.011 3.6E-07 44.8 2.4 46 42-97 3-49 (311)
27 1ep3_A Dihydroorotate dehydrog 93.2 0.042 1.4E-06 41.1 2.4 46 42-98 8-55 (311)
28 1xm3_A Thiazole biosynthesis p 60.2 3.7 0.00013 30.5 1.7 17 41-58 2-18 (264)
29 3oix_A Putative dihydroorotate 59.3 7.9 0.00027 30.2 3.5 44 44-97 41-85 (345)
30 3i65_A Dihydroorotate dehydrog 40.3 16 0.00055 29.4 2.5 45 42-97 85-130 (415)
31 3zwt_A Dihydroorotate dehydrog 31.6 71 0.0024 24.8 5.0 45 43-98 52-97 (367)
32 3tjx_A Dihydroorotate dehydrog 26.4 34 0.0012 26.0 2.2 43 46-97 41-84 (354)
33 1gte_A Dihydropyrimidine dehyd 26.0 50 0.0017 28.9 3.4 45 43-96 535-579 (1025)
34 4ef8_A Dihydroorotate dehydrog 22.0 1.4E+02 0.0049 23.0 5.1 44 46-97 41-84 (354)
35 1vcf_A Isopentenyl-diphosphate 20.7 1.1E+02 0.0038 22.9 4.1 46 43-93 50-97 (332)
36 1p0k_A Isopentenyl-diphosphate 20.5 37 0.0013 25.6 1.4 21 42-63 46-66 (349)
No 1
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.78 E-value=1.3e-19 Score=143.14 Aligned_cols=65 Identities=22% Similarity=0.238 Sum_probs=61.3
Q ss_pred hccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 40 IQALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 40 fsPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
|+|++ ||+++|||||||+||+++++. ||.+++++++||++||+ |+||||+|++.|+++|++++++
T Consensus 5 f~p~~-ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~ 71 (349)
T 3hgj_A 5 FTPLE-LGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYD 71 (349)
T ss_dssp GSCEE-ETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTS
T ss_pred CCCee-ECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCc
Confidence 38889 999999999999999999886 89999999999999999 8999999999999999988865
No 2
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.78 E-value=1.1e-19 Score=144.20 Aligned_cols=64 Identities=19% Similarity=0.211 Sum_probs=61.0
Q ss_pred ccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||||+||+++.+.||.+++++++||++||+ |+||||+|++.|+++|++++++
T Consensus 6 ~P~~-ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~ 70 (363)
T 3l5l_A 6 EPYT-LKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGC 70 (363)
T ss_dssp SCEE-ETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTC
T ss_pred CCee-ECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCc
Confidence 8889 99999999999999999888899999999999999999 8999999999999999998875
No 3
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.78 E-value=2.3e-19 Score=145.55 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=64.9
Q ss_pred CCCC-cHHhhhhhhcccccc-CceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCC
Q 033951 28 PDMT-NLSLILLRIQALSWV-CLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFR 104 (107)
Q Consensus 28 ~~m~-~~~Lf~~pfsPi~~I-g~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~ 104 (107)
+.|+ +++|| +|++ | |+++|||||||+||+++++. ||.+++++++||++||+|+||||+|+++|++.|+++++
T Consensus 19 ~~M~~~~~Lf----~P~~-i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~ 93 (419)
T 3l5a_A 19 SHMYRYKPLL----QSIH-LPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEY 93 (419)
T ss_dssp --CCTTGGGG----SCEE-CTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTT
T ss_pred ccccchhhcC----CCEE-eCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCC
Confidence 3354 45677 8889 9 99999999999999999986 89999999999999999999999999999999999887
Q ss_pred C
Q 033951 105 N 105 (107)
Q Consensus 105 ~ 105 (107)
+
T Consensus 94 ~ 94 (419)
T 3l5a_A 94 G 94 (419)
T ss_dssp C
T ss_pred c
Confidence 5
No 4
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.77 E-value=1.7e-19 Score=143.04 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=61.1
Q ss_pred ccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||||+||+++++. ||.+++++++||++||+ |+||||+|++.|+++|++++++
T Consensus 6 ~P~~-ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~ 71 (343)
T 3kru_A 6 MPLK-IKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHD 71 (343)
T ss_dssp SCEE-ETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTS
T ss_pred ccce-eeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCcccccc
Confidence 8889 999999999999999999996 89999999999999999 8999999999999999988875
No 5
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.77 E-value=1.6e-19 Score=142.53 Aligned_cols=68 Identities=22% Similarity=0.302 Sum_probs=63.0
Q ss_pred HHhhhhhhccccccCceEecCceEeCCCccCccC--CCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 33 LSLILLRIQALSWVCLMVVVGRVVLAPMTRCRAL--NGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 33 ~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~--dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
++|| +|++ ||+++|||||||+||+++++. ||.+++++++||++||+ |+||||+|++.|+++|++++++
T Consensus 3 ~~Lf----~p~~-ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~ 73 (340)
T 3gr7_A 3 TMLF----SPYT-IRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERD 73 (340)
T ss_dssp CSTT----SCEE-ETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTS
T ss_pred hhcC----CCEe-ECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCC
Confidence 4567 8889 999999999999999999985 89999999999999999 8999999999999999988865
No 6
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.77 E-value=2.4e-19 Score=144.01 Aligned_cols=71 Identities=34% Similarity=0.568 Sum_probs=63.9
Q ss_pred CCcHHhhhhhhccccccCceEecCceEeCCCccCccC-CCCCC--HHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 30 MTNLSLILLRIQALSWVCLMVVVGRVVLAPMTRCRAL-NGIPG--PALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 30 m~~~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t--~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
|.+++|| +|++ ||+++|||||||+||+++++. ||.++ |.+++||++||+ |+||||+|++.|++++++++++
T Consensus 12 ~~~s~LF----~P~~-ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~ 86 (400)
T 4gbu_A 12 LGDTNLF----KPIK-IGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNA 86 (400)
T ss_dssp CTTSGGG----SCEE-ETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTS
T ss_pred CCCCCCC----CCee-ECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCC
Confidence 6778899 8889 999999999999999999985 66554 678999999999 8999999999999999999876
No 7
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.76 E-value=4.8e-19 Score=143.77 Aligned_cols=71 Identities=38% Similarity=0.570 Sum_probs=65.6
Q ss_pred CCCcHHhhhhhhccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCC
Q 033951 29 DMTNLSLILLRIQALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFR 104 (107)
Q Consensus 29 ~m~~~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~ 104 (107)
+|+.++|| +|++ ||+++|||||||+||+++++. ||.+++++++||++||+ |+||||+|++.|++.++++++
T Consensus 8 ~m~~~~Lf----~P~~-ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~ 80 (407)
T 3tjl_A 8 PLKDSEAF----QSIK-VGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEG 80 (407)
T ss_dssp CCTTSGGG----SCEE-ETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSS
T ss_pred CCCcccCC----CCee-ECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCC
Confidence 36667788 8889 999999999999999999985 79999999999999999 899999999999999999887
No 8
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.75 E-value=6.3e-19 Score=140.76 Aligned_cols=66 Identities=33% Similarity=0.643 Sum_probs=61.6
Q ss_pred hhhccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 38 LRIQALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 38 ~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+.|+|++ ||+++|||||||+||++++++ ||.+++++++||++||+ +||||+|++.|+++|++++++
T Consensus 11 ~~f~P~~-ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~ 77 (361)
T 3gka_A 11 SLFDPLT-IGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYAST 77 (361)
T ss_dssp CTTSCEE-ETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTC
T ss_pred cccCCee-ECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCC
Confidence 4458889 999999999999999999985 89999999999999999 899999999999999998875
No 9
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.75 E-value=9.4e-19 Score=138.85 Aligned_cols=66 Identities=30% Similarity=0.518 Sum_probs=61.1
Q ss_pred hhhccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 38 LRIQALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 38 ~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
++|+|++ ||+++|||||||+||++++++ ||.+++++++||++||+ +||||+|++.|+++++++|++
T Consensus 3 ~LF~P~~-ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~ 69 (358)
T 4a3u_A 3 SLFDPIR-FGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYA 69 (358)
T ss_dssp CTTSCEE-ETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTC
T ss_pred CCCCCce-ECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCC
Confidence 4448999 999999999999999999986 89999999999999998 589999999999999999876
No 10
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.74 E-value=2.1e-18 Score=137.86 Aligned_cols=72 Identities=39% Similarity=0.557 Sum_probs=65.6
Q ss_pred CCCcHHhhhhhhccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 29 DMTNLSLILLRIQALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 29 ~m~~~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++..|| +|++ ||+++|||||||+||++.++.+|.+++++++||++||+|+||||+|++.|++.+++++++
T Consensus 10 ~m~~~~Lf----~P~~-ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~ 81 (376)
T 1icp_A 10 QVDKIPLM----SPCK-MGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDV 81 (376)
T ss_dssp CCCCCGGG----SCEE-ETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTC
T ss_pred cCChhhcC----CCee-ECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCccc
Confidence 46666788 7889 999999999999999999987789999999999999998999999999999999988765
No 11
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.73 E-value=3.9e-18 Score=136.66 Aligned_cols=67 Identities=30% Similarity=0.697 Sum_probs=61.8
Q ss_pred HHhhhhhhccccccCceEecCceEeCCCccCccC--CCCCC-HHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 33 LSLILLRIQALSWVCLMVVVGRVVLAPMTRCRAL--NGIPG-PALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 33 ~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~--dG~~t-~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
..|| +|++ ||+++|||||||+||+++++. ||.++ +++++||++|| |+||||+|++.|+++|++++++
T Consensus 5 ~~Lf----~P~~-ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~ 74 (379)
T 3aty_A 5 PELL----RPLK-LGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTE 74 (379)
T ss_dssp TTTT----SCEE-ETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSC
T ss_pred hhcC----CCee-ECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCC
Confidence 3466 8889 999999999999999999985 89999 99999999999 5999999999999999998875
No 12
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.73 E-value=2.2e-18 Score=137.65 Aligned_cols=63 Identities=37% Similarity=0.717 Sum_probs=60.0
Q ss_pred ccccccCceEecCceEeCCCccCccC-CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRAL-NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~-dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||||+||++++++ ||.+++++++||++||+ +||||+|++.|+++|++++++
T Consensus 6 ~P~~-ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~ 69 (362)
T 4ab4_A 6 DPIK-LGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDT 69 (362)
T ss_dssp SCEE-ETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTC
T ss_pred CCee-ECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCC
Confidence 8889 999999999999999999985 89999999999999999 899999999999999998875
No 13
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.70 E-value=1.1e-17 Score=131.34 Aligned_cols=64 Identities=23% Similarity=0.355 Sum_probs=60.1
Q ss_pred ccccccCceEecCceEeCCCccCccC--CCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRAL--NGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~--dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||+|+||++.++. ||.+++.+++||++||+ |+||||+|.+.|++.|+.++++
T Consensus 7 ~p~~-ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~ 73 (338)
T 1z41_A 7 TPIT-IKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQD 73 (338)
T ss_dssp SCEE-ETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTS
T ss_pred CCee-ECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCC
Confidence 8889 999999999999999999984 89999999999999999 8999999999999999888764
No 14
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.70 E-value=1.7e-17 Score=133.81 Aligned_cols=64 Identities=55% Similarity=0.894 Sum_probs=60.6
Q ss_pred ccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||||+||++.++.+|.+++++++||++||+|+||||+|++.|++.|++++++
T Consensus 20 ~P~~-ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~ 83 (402)
T 2hsa_B 20 SPYK-MGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHV 83 (402)
T ss_dssp SCEE-ETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTC
T ss_pred CCee-ECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCC
Confidence 8889 999999999999999999987679999999999999999999999999999999998865
No 15
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.68 E-value=1.9e-17 Score=132.47 Aligned_cols=70 Identities=39% Similarity=0.695 Sum_probs=62.4
Q ss_pred CCcHHhhhhhhccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 30 MTNLSLILLRIQALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 30 m~~~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
|++..|| +|++ ||+++|||||||+||++.++.||.+++.+++||++||. +||||+|++.|++.+++++++
T Consensus 6 m~~~~Lf----~P~~-ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~ 75 (377)
T 2r14_A 6 FSNPGLF----TPLQ-LGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYT 75 (377)
T ss_dssp --CCCTT----SCEE-ETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTC
T ss_pred CChhhcC----CCee-ECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCC
Confidence 4444577 8889 99999999999999999998889999999999999996 899999999999999988765
No 16
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.67 E-value=6.3e-17 Score=128.72 Aligned_cols=63 Identities=40% Similarity=0.671 Sum_probs=59.1
Q ss_pred ccccccCceEecCceEeCCCccCcc-C-CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRA-L-NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a-~-dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
+|++ ||+++|||||||+||++.++ + ||.+++.+++||++|| |+||||+|++.|++.+++++++
T Consensus 7 ~P~~-ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~ 71 (364)
T 1vyr_A 7 TPLK-VGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGA 71 (364)
T ss_dssp SCEE-ETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTC
T ss_pred CCee-ECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCC
Confidence 8889 99999999999999999998 4 8999999999999999 5999999999999999998865
No 17
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.64 E-value=1.6e-16 Score=126.47 Aligned_cols=67 Identities=40% Similarity=0.715 Sum_probs=61.2
Q ss_pred HHhhhhhhccccccCceEecCceEeCCCccCccC--CCCCCHHHHHHHHHhcCCCcEEEecccccCCCCCCCCCC
Q 033951 33 LSLILLRIQALSWVCLMVVVGRVVLAPMTRCRAL--NGIPGPALATYYQQRSTPGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 33 ~~Lf~~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~--dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
..|| +|++ ||+++|||||||+||++.++. ||.+++.+++||++||+ +||||+|++.|++.+++++++
T Consensus 3 ~~Lf----~P~~-ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~ 71 (365)
T 2gou_A 3 QSLF----QPIT-LGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWT 71 (365)
T ss_dssp TGGG----SCEE-ETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTC
T ss_pred cccC----CCee-ECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCC
Confidence 3466 8889 999999999999999999984 89999999999999996 999999999999999988765
No 18
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.55 E-value=2.3e-15 Score=125.72 Aligned_cols=65 Identities=20% Similarity=0.250 Sum_probs=58.5
Q ss_pred hccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 40 IQALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 40 fsPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
|+|++ ||+++|||||+|+||+++.++++.+++.+++||++||+ |+||||+|.+.|++.++.++++
T Consensus 6 f~p~~-ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~ 71 (671)
T 1ps9_A 6 FAPLD-LGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGG 71 (671)
T ss_dssp TCCEE-CSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTC
T ss_pred CCCee-ECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCC
Confidence 38889 99999999999999999776555668999999999999 8999999999999999888764
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.42 E-value=9.9e-14 Score=117.41 Aligned_cols=63 Identities=11% Similarity=0.088 Sum_probs=54.8
Q ss_pred hhccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCCCCCCCC
Q 033951 39 RIQALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPTAPGYFR 104 (107)
Q Consensus 39 pfsPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~ 104 (107)
+|+|++ ||+++|||||+|+||+..++ ++.+ +++++||++||+ |+||||+|++.|++.+..+++
T Consensus 9 Lf~p~~-ig~~~l~NRiv~apm~~~~~-~~~~-~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~ 72 (729)
T 1o94_A 9 LFEPIQ-IGPKTLRNRFYQVPHCIGAG-SDKP-GFQSAHRSVKAEGGWAALNTEYCSINPESDDTHR 72 (729)
T ss_dssp GGSCEE-ETTEEESSSEEECCCCCSCT-TTCH-HHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTS
T ss_pred cCCCee-ECCEEECCccEECCCcCCcC-CCCc-HHHHHHHHHHhcCCCCEEEEcceEecCcccCCCC
Confidence 338889 99999999999999998765 3334 499999999999 899999999999999988764
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.41 E-value=1.3e-13 Score=115.55 Aligned_cols=64 Identities=11% Similarity=0.068 Sum_probs=52.1
Q ss_pred hhhccccccCceEecCceEeCCCccCccCCCCCCHH-HHHHHHHhcC-CCcEEEecccccCCCCCCCCCC
Q 033951 38 LRIQALSWVCLMVVVGRVVLAPMTRCRALNGIPGPA-LATYYQQRST-PGGFLISEGTAVSPTAPGYFRN 105 (107)
Q Consensus 38 ~pfsPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~-~~~yy~~RA~-G~gLIIte~~~Vs~~g~~~p~~ 105 (107)
.+|+|++ ||+++|||||+|+||+... +.+++. ...||++||+ |+||||+|.+.|++.++.+++.
T Consensus 13 ~lf~p~~-ig~~~l~NRiv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~ 78 (690)
T 3k30_A 13 VLFEPVQ-IGPFTTKNRFYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFI 78 (690)
T ss_dssp GGGCCCE-ETTEECSSSEEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSC
T ss_pred hcCCCee-ECCEEECCCeEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCc
Confidence 3348889 9999999999999998754 344544 4457788999 8999999999999999888763
No 21
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.18 E-value=0.00014 Score=56.08 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=29.7
Q ss_pred eEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 49 MVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 49 l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
++||||+++|||... + | ..|+..+++ |+||+++|.+.+++.
T Consensus 1 ~~l~nri~~APM~~~-t-~-------~~~r~~~~~~G~gli~te~~~~~~~ 42 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGY-T-D-------SAFRTLAFEWGADFAFSEMVSAKGF 42 (318)
T ss_dssp ----CEEEECCCTTT-C-S-------HHHHHHHHTTTCCCEECSCEEHHHH
T ss_pred CccCCCEEECCCCCC-C-c-------HHHHHHHHHHCcCEEEeCCEEEccc
Confidence 479999999999953 2 2 468888888 899999999877643
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.96 E-value=0.00039 Score=54.52 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=32.5
Q ss_pred EecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccC
Q 033951 50 VVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVS 96 (107)
Q Consensus 50 ~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs 96 (107)
+|||||++|||.. +|+..++|+.++..|.||+++|.+.++
T Consensus 1 ~l~nriv~APM~g-------~td~~~r~~~r~~Gg~gli~te~~~~~ 40 (350)
T 3b0p_A 1 MLDPRLSVAPMVD-------RTDRHFRFLVRQVSLGVRLYTEMTVDQ 40 (350)
T ss_dssp -CCCSEEECCCTT-------TSSHHHHHHHHHHCSSSBEECCCEEHH
T ss_pred CCCCCEEECCCCC-------CCHHHHHHHHHHcCCCCEEEeCCEEec
Confidence 4899999999982 789999997655556799999998764
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=96.76 E-value=0.00092 Score=51.44 Aligned_cols=47 Identities=11% Similarity=0.034 Sum_probs=37.2
Q ss_pred ccccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 41 QALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
-|++ ++++++||||+++++. ..++ +|++.+++ |+|+|++|.+.+.+.
T Consensus 45 l~~~-i~g~~l~npi~~aag~---~~~~-------~~~~~~a~~G~g~i~~~~~~~~~~ 92 (336)
T 1f76_A 45 KPVN-CMGLTFKNPLGLAAGL---DKDG-------ECIDALGAMGFGSIEIGTVTPRPQ 92 (336)
T ss_dssp CCEE-ETTEEESSSEEECTTS---STTC-------CCHHHHHHTTCSEEEEEEECSSCB
T ss_pred CCeE-ECCEEcCCCcEeCccc---CCcH-------HHHHHHHHcCccEEEeCCCCCCCC
Confidence 3567 9999999999999652 2233 28888889 999999999988754
No 24
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.68 E-value=0.0038 Score=50.91 Aligned_cols=46 Identities=4% Similarity=-0.125 Sum_probs=35.6
Q ss_pred cccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 42 ALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
|++ +++++|+|+|++|+... ...++|+++++ |+|+|+++.+.+.|.
T Consensus 83 ~~~-i~Gl~~~NPvglAAG~d----------k~~~~~~~l~~~GfG~v~~gtvT~~pq 129 (443)
T 1tv5_A 83 CTN-IKHLDFINPFGVAAGFD----------KNGVCIDSILKLGFSFIEIGTITPRGQ 129 (443)
T ss_dssp CEE-ETTEEESSSEEECTTTT----------TTCSSHHHHHTTTCSEEEEEEECSSCB
T ss_pred CeE-ECCEEeCCCcEECCccc----------CccHHHHHHHhcCCCEEEEeeeecCCC
Confidence 557 99999999999997652 12235666788 999999999988654
No 25
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.35 E-value=0.023 Score=43.00 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=33.7
Q ss_pred cccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 42 ALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
|++ +++++|||++++|++.. ..| .++++..++ |+|+|+++.+.+.+.
T Consensus 5 ~~~-i~g~~l~nPi~~Aag~~--~~~-------~~~~~~~~~~G~g~v~~~~v~~~~~ 52 (314)
T 2e6f_A 5 KLN-LLDHVFANPFMNAAGVL--CST-------EEDLRCMTASSSGALVSKSCTSAPR 52 (314)
T ss_dssp CEE-ETTEEESSSEEECTTSS--CSS-------HHHHHHHHHSSCSCEECCCBCSSCB
T ss_pred ceE-ECCEecCCCcEECCCCC--CCC-------HHHHHHHHHCCCCEEEeCccCCccc
Confidence 456 99999999999997552 112 233444455 899999999888763
No 26
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.05 E-value=0.011 Score=44.83 Aligned_cols=46 Identities=7% Similarity=0.079 Sum_probs=33.8
Q ss_pred cccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCC
Q 033951 42 ALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSP 97 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~ 97 (107)
|++ +++++||||+++||... ..| .++++..++ |+|+|+++.+.+.+
T Consensus 3 ~~~-i~g~~l~npv~~Aag~~--~~~-------~~~~~~~~~~G~g~i~~~~v~~~~ 49 (311)
T 1jub_A 3 NTT-FANAKFANPFMNASGVH--CMT-------IEDLEELKASQAGAYITKSSTLEK 49 (311)
T ss_dssp CEE-ETTEEESSSEEECTTSS--CSS-------HHHHHHHHHSSCSCCBCCCBCSSC
T ss_pred ceE-ECCEEcCCCcEECCCCC--CCC-------HHHHHHHHHCCCCEEEeCccCCcc
Confidence 456 99999999999997431 112 344555566 89999999998876
No 27
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=93.24 E-value=0.042 Score=41.10 Aligned_cols=46 Identities=13% Similarity=0.162 Sum_probs=30.6
Q ss_pred cccccCceEecCceEeCC-CccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 42 ALSWVCLMVVVGRVVLAP-MTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aP-m~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
|++ +++++||||++++| |.. .+ ++ +.+..+. |.|+++++.+.+.|.
T Consensus 8 ~~~-~~g~~l~npi~~aag~~~----~~---~~---~~~~~~~~g~G~~~~~si~~~p~ 55 (311)
T 1ep3_A 8 SVK-LPGLDLKNPIIPASGCFG----FG---EE---YAKYYDLNKLGSIMVKATTLHPR 55 (311)
T ss_dssp CEE-ETTEEESSSEEECTTSST----TS---TT---GGGTSCGGGSSCEEEEEECSSCB
T ss_pred ceE-ECCEECCCCcEECCCCCC----CC---HH---HHHHHHhcCCCEEEeCeeccCcc
Confidence 456 99999999999999 321 11 11 1122334 788999998876654
No 28
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=60.21 E-value=3.7 Score=30.45 Aligned_cols=17 Identities=18% Similarity=0.219 Sum_probs=14.6
Q ss_pred ccccccCceEecCceEeC
Q 033951 41 QALSWVCLMVVVGRVVLA 58 (107)
Q Consensus 41 sPi~~Ig~l~LkNRiv~a 58 (107)
.|++ |++++||||++++
T Consensus 2 ~~~~-i~~~~~~~~~~~~ 18 (264)
T 1xm3_A 2 SMLT-IGGKSFQSRLLLG 18 (264)
T ss_dssp CCEE-ETTEEESCCEEEE
T ss_pred CCeE-ECCEEecCCCEEE
Confidence 3567 9999999999986
No 29
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=59.32 E-value=7.9 Score=30.15 Aligned_cols=44 Identities=5% Similarity=-0.068 Sum_probs=29.1
Q ss_pred cccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCC
Q 033951 44 SWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSP 97 (107)
Q Consensus 44 ~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~ 97 (107)
+ +.+++|||-++.|+-.. + -+.+.++++ .. |+|.|+++.+...|
T Consensus 41 ~-~~Gl~~~NPv~lAaG~~-----~-~~~e~~~~~---~~~G~G~v~~ktvt~~p 85 (345)
T 3oix_A 41 T-IGSFDFDNCLMNAAGVY-----C-MTREELAAI---DHSEAGSFVTXTGTLEE 85 (345)
T ss_dssp E-ETTEEESCSEEECTTSS-----C-SSHHHHHHH---HTSSCSBCBCCCBCSSC
T ss_pred E-ECCEECCCCCEEcCCCC-----C-CCHHHHHHH---HHcCCCeEEeeeecCCC
Confidence 5 89999999999973211 1 123444443 34 78889998887664
No 30
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=40.33 E-value=16 Score=29.38 Aligned_cols=45 Identities=9% Similarity=-0.041 Sum_probs=31.0
Q ss_pred cccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCC
Q 033951 42 ALSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSP 97 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~ 97 (107)
+.+ +.+++++|-|+.|+-.- .++.. +....+ |+|.|.++.+...|
T Consensus 85 ~v~-~~Gl~f~NPvglAAG~d---k~~~~-------~~~l~~lGfG~vevgtvT~~p 130 (415)
T 3i65_A 85 CTN-IKHLDFINPFGVAAGFD---KNGVC-------IDSILKLGFSFIEIGTITPRG 130 (415)
T ss_dssp CEE-ETTEEESSSEEECTTSS---TTCSS-------HHHHHTTTCSEEEEEEECSSC
T ss_pred cEE-ECCEECCCCCEECCCCC---CCHHH-------HHHHHHcCCCeEEeCcccCCc
Confidence 456 89999999999985442 13322 234456 89999999876654
No 31
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=31.65 E-value=71 Score=24.81 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=30.1
Q ss_pred ccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCCC
Q 033951 43 LSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSPT 98 (107)
Q Consensus 43 i~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~~ 98 (107)
.+ +.+++++|-++.|+-.. .++.. +.+... |.|.|+++.+...|.
T Consensus 52 ~~-~~Gl~~~NPvglAaG~~---~~~~~-------~~~~~~~g~G~v~~ktvt~~pq 97 (367)
T 3zwt_A 52 VR-VLGHKFRNPVGIAAGFD---KHGEA-------VDGLYKMGFGFVEIGSVTPKPQ 97 (367)
T ss_dssp EE-ETTEEESSSEEECTTSS---TTSSS-------HHHHHHTTCSEEEEEEECSSCB
T ss_pred EE-ECCEEcCCCCEeCCCcC---CCHHH-------HHHHHhcCcCeEEeCCccCCCC
Confidence 45 89999999999984321 23322 223333 799999998877653
No 32
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=26.39 E-value=34 Score=26.01 Aligned_cols=43 Identities=9% Similarity=-0.010 Sum_probs=27.1
Q ss_pred cCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC-CCcEEEecccccCC
Q 033951 46 VCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST-PGGFLISEGTAVSP 97 (107)
Q Consensus 46 Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~-G~gLIIte~~~Vs~ 97 (107)
+.+++|||-|+.|+-.. . -+.+ +...... |+|.|+++.+...+
T Consensus 41 ~~Gl~f~NPvglAaG~~--~----~~~e---~~~~l~~~G~G~v~~~tvt~~p 84 (354)
T 3tjx_A 41 LLNNTFANPFMNAAGVM--C----TTTE---ELVAMTESASGSLVSKSCTPAL 84 (354)
T ss_dssp ETTEEESSSEEECTTSS--C----SSHH---HHHHHHHSSCSCEEEEEECSSC
T ss_pred ECCEEcCCCcEEccCCC--C----CCHH---HHHHHHHcCCCEEEeCCcCccc
Confidence 78999999999984211 1 1223 3344444 77888888765443
No 33
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=26.01 E-value=50 Score=28.86 Aligned_cols=45 Identities=9% Similarity=0.121 Sum_probs=29.3
Q ss_pred ccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccC
Q 033951 43 LSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVS 96 (107)
Q Consensus 43 i~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs 96 (107)
++ +.+++++|.++.+||.... +......+.+. |.|+++++.+..+
T Consensus 535 ~~-~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~--g~G~vv~~t~~~~ 579 (1025)
T 1gte_A 535 VE-MAGLKFINPFGLASAAPTT------SSSMIRRAFEA--GWGFALTKTFSLD 579 (1025)
T ss_dssp EE-ETTEEESSSEEECSSGGGS------SHHHHHHHHHH--TCSEEECCCBCCG
T ss_pred ee-eccccccCcccccCCCCCC------CHHHHHHHHHC--CcCeEEeceeccc
Confidence 45 6799999999999987632 12222222111 7889988776553
No 34
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=22.02 E-value=1.4e+02 Score=23.04 Aligned_cols=44 Identities=11% Similarity=0.072 Sum_probs=28.7
Q ss_pred cCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcCCCcEEEecccccCC
Q 033951 46 VCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRSTPGGFLISEGTAVSP 97 (107)
Q Consensus 46 Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~G~gLIIte~~~Vs~ 97 (107)
+.+++|||-++.|+-.-. -+.+.++++.+. |+|.|+++.+...+
T Consensus 41 ~~Gl~~~NPv~lAAG~~~------~~~e~~~~l~~~--G~G~v~~ktvt~~p 84 (354)
T 4ef8_A 41 LLNNTFANPFMNAAGVMC------TTTEELVAMTES--ASGSLVSKSCTPAL 84 (354)
T ss_dssp ETTEEESSSEEECTTSSC------SSHHHHHHHHHS--SCSCEEEEEECSSC
T ss_pred ECCEECCCCCEeccCCCC------CCHHHHHHHHHc--CCCeEEeCcccCcc
Confidence 889999999998742221 124444444332 68888888876654
No 35
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=20.74 E-value=1.1e+02 Score=22.87 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=27.1
Q ss_pred ccccCceEecCceEeCCCccCccCCCCCCHHHHHHHHHhcC--CCcEEEeccc
Q 033951 43 LSWVCLMVVVGRVVLAPMTRCRALNGIPGPALATYYQQRST--PGGFLISEGT 93 (107)
Q Consensus 43 i~~Ig~l~LkNRiv~aPm~~~~a~dG~~t~~~~~yy~~RA~--G~gLIIte~~ 93 (107)
.+ +++.++++.++.+||... ..++ ++...-+.+-|+ |.++++.+..
T Consensus 50 ~~-i~g~~l~~P~~iapm~g~-~~~~---~~~~~~la~~a~~~G~~~~~~~~~ 97 (332)
T 1vcf_A 50 TP-FLGKTLKAPFLIGAMTGG-EENG---ERINLALAEAAEALGVGMMLGSGR 97 (332)
T ss_dssp EE-ETTEEESSSEEECCCC----CCH---HHHHHHHHHHHHHHTCEEEEEECH
T ss_pred eE-ECCcccCCceEEeccccC-Ccch---hHHHHHHHHHHHHcCCCEEeCCch
Confidence 45 789999999999999742 1111 221122233333 7888887664
No 36
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=20.49 E-value=37 Score=25.63 Aligned_cols=21 Identities=10% Similarity=0.118 Sum_probs=17.2
Q ss_pred cccccCceEecCceEeCCCccC
Q 033951 42 ALSWVCLMVVVGRVVLAPMTRC 63 (107)
Q Consensus 42 Pi~~Ig~l~LkNRiv~aPm~~~ 63 (107)
..+ +++.+++|.++.+||...
T Consensus 46 ~~~-i~g~~~~~P~~iApm~g~ 66 (349)
T 1p0k_A 46 STK-IGELSSSSPIFINAMTGG 66 (349)
T ss_dssp CEE-ETTEEESCSEEEECCCCS
T ss_pred eeE-ECCcccCCceEEcCcccc
Confidence 345 789999999999998653
Done!