BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033955
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q941L3|BON1_ARATH Protein BONZAI 1 OS=Arabidopsis thaliana GN=BON1 PE=1 SV=2
Length = 578
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 79/99 (79%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M +Y SAL NV+LAGPTLFG VIN AA IA SL+ KY+VLLIITDGV+TDLQETKD
Sbjct: 429 MTSYTSALFNVSLAGPTLFGPVINAAAMIASASLAQGSRKYYVLLIITDGVITDLQETKD 488
Query: 61 ALVRASDLPLSILIVGVGGADFTQMEVRNVFQLEYLLTS 99
ALV ASDLPLSILIVGVGGADF +ME+ + + E L +S
Sbjct: 489 ALVSASDLPLSILIVGVGGADFKEMEILDADKGERLESS 527
>sp|Q5XQC7|BON3_ARATH Protein BONZAI 3 OS=Arabidopsis thaliana GN=BON3 PE=1 SV=1
Length = 584
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 70/87 (80%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AYASAL NV+LAGPTLF V++ AA A QSLS + KYFVLLIITDGVLTD+ T D
Sbjct: 432 MVAYASALRNVSLAGPTLFSNVVDKAAHTASQSLSQNSPKYFVLLIITDGVLTDMAGTVD 491
Query: 61 ALVRASDLPLSILIVGVGGADFTQMEV 87
ALVRASDLPLS+LIVGVG DF QME+
Sbjct: 492 ALVRASDLPLSVLIVGVGNTDFKQMEM 518
>sp|Q5S1W2|BON2_ARATH Protein BONZAI 2 OS=Arabidopsis thaliana GN=BON2 PE=1 SV=2
Length = 586
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 77/99 (77%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AY AL NV+ AGPTLFG VIN AA IA SL+ KY+VLLIITDGV+TDLQET+D
Sbjct: 432 MNAYNGALFNVSFAGPTLFGPVINAAATIASDSLAQSAKKYYVLLIITDGVITDLQETRD 491
Query: 61 ALVRASDLPLSILIVGVGGADFTQMEVRNVFQLEYLLTS 99
++V ASDLPLSILIVGVGGAD+ +MEV + + E L +S
Sbjct: 492 SIVSASDLPLSILIVGVGGADYKEMEVLDGDKGEKLESS 530
>sp|Q99829|CPNE1_HUMAN Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1
Length = 537
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETKDA 61
AY AL V L GPT F +IN AR A Q+ S+YF+LL++TDG +TD++ T++A
Sbjct: 375 AYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREA 434
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+VRAS+LP+S++IVGVGGADF ME
Sbjct: 435 VVRASNLPMSVIIVGVGGADFEAME 459
>sp|O75131|CPNE3_HUMAN Copine-3 OS=Homo sapiens GN=CPNE3 PE=1 SV=1
Length = 537
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETKDA 61
AY S L + L GPT F +IN AR A + S+YFVLLIITDGV+TDL ET+ A
Sbjct: 381 AYRSCLPQIKLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQA 440
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V AS LP+SI+IVGVGGADF+ ME
Sbjct: 441 IVNASRLPMSIIIVGVGGADFSAME 465
>sp|Q96FN4|CPNE2_HUMAN Copine-2 OS=Homo sapiens GN=CPNE2 PE=1 SV=3
Length = 548
Score = 92.0 bits (227), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSY-DRSKYFVLLIITDGVLTDLQETKDA 61
AY++ L ++ GPT F ++N AR A Q+ ++YF+LLIITDGV++D++ET+ A
Sbjct: 397 AYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQRTATQYFILLIITDGVISDMEETRHA 456
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V+AS LP+SI+IVGVG ADF ME
Sbjct: 457 VVQASKLPMSIIIVGVGNADFAAME 481
>sp|Q9UBL6|CPNE7_HUMAN Copine-7 OS=Homo sapiens GN=CPNE7 PE=2 SV=1
Length = 633
Score = 92.0 bits (227), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETKDA 61
AY + L V L GPT +I+ AR+A S + S+Y++LLI+TDGV+TD+ +T++A
Sbjct: 472 AYQNCLPRVQLYGPTNVAPIISKVARVAAAEESTGKASQYYILLILTDGVVTDMADTREA 531
Query: 62 LVRASDLPLSILIVGVGGADFTQMEV 87
+VRAS LP+SI+IVGVG ADFT M+V
Sbjct: 532 IVRASRLPMSIIIVGVGNADFTDMQV 557
>sp|Q8BT60|CPNE3_MOUSE Copine-3 OS=Mus musculus GN=Cpne3 PE=1 SV=2
Length = 533
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETKDA 61
AY + L + L GPT F +IN AR A + S+YFVLLIITDGV+TDL ET+ A
Sbjct: 381 AYRTCLPQIRLYGPTNFSPIINHVARFAAAATQQQTASQYFVLLIITDGVITDLDETRQA 440
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V A+ LP+SI+IVGVGGADF+ ME
Sbjct: 441 IVNAAKLPMSIIIVGVGGADFSAME 465
>sp|Q0VE82|CPNE7_MOUSE Copine-7 OS=Mus musculus GN=Cpne7 PE=2 SV=1
Length = 557
Score = 90.5 bits (223), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSY-DRSKYFVLLIITDGVLTDLQETKDA 61
AY + L V L GPT +I+ AR+A S + S+Y++LLI+TDGV+TD+ +T++A
Sbjct: 396 AYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREA 455
Query: 62 LVRASDLPLSILIVGVGGADFTQMEV 87
+VRAS LP+S++IVGVG ADFT M++
Sbjct: 456 IVRASHLPMSVIIVGVGNADFTDMQI 481
>sp|Q86YQ8|CPNE8_HUMAN Copine-8 OS=Homo sapiens GN=CPNE8 PE=1 SV=2
Length = 564
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AY +L +V L GPT F VIN AR A S D S+YFVLLI+TDGV++D+ +TK+
Sbjct: 397 MEAYYRSLKSVQLYGPTNFAPVINHVARYA--SSVKDGSQYFVLLIVTDGVISDMAQTKE 454
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
++V AS LP+SI+IVGVG A+F M
Sbjct: 455 SIVNASKLPMSIIIVGVGPAEFDAM 479
>sp|Q9DC53|CPNE8_MOUSE Copine-8 OS=Mus musculus GN=Cpne8 PE=2 SV=2
Length = 564
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AY +L +V L GPT F VIN AR A S D S+YFVLLI+TDGV++D+ +TK+
Sbjct: 397 MEAYYRSLKSVQLYGPTNFAPVINHVARYA--SSVKDGSQYFVLLIVTDGVISDMAQTKE 454
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
++V AS LP+SI+IVGVG A+F M
Sbjct: 455 SIVNASKLPMSIIIVGVGPAEFDAM 479
>sp|A8WMY4|NRA1_CAEBR Nicotinic receptor-associated protein 1 OS=Caenorhabditis briggsae
GN=nra-1 PE=3 SV=2
Length = 629
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M+AY AL NV L GPT F +I+T A+ A Q++ +D ++Y +LLIITDG+++D+ T
Sbjct: 430 MSAYRHALQNVQLYGPTNFAPIIDTVAQKA-QNMIHDSARYQILLIITDGIISDMHATIR 488
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
+++ AS LPLSI+I+GVG DF +M
Sbjct: 489 SIINASGLPLSIIIIGVGNEDFEKM 513
>sp|Q9XUB9|NRA1_CAEEL Nicotinic receptor-associated protein 1 OS=Caenorhabditis elegans
GN=nra-1 PE=3 SV=1
Length = 634
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AY AL+NV L GPT F +I AR A Q++ +D ++Y +LLIITDG+++D+ T
Sbjct: 426 MTAYRHALSNVQLYGPTNFAPIIENVARKA-QNMIHDSARYQILLIITDGIISDMHATIR 484
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
+++ AS LPLSI+I+GVG DF +M
Sbjct: 485 SIISASGLPLSIIIIGVGNEDFEKM 509
>sp|Q5RAE1|CPNE3_PONAB Copine-3 OS=Pongo abelii GN=CPNE3 PE=2 SV=1
Length = 537
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVIN-TAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKDA 61
AY S L + L GPT F +IN A A + S+YFVLLIITDGV+TDL ET+ A
Sbjct: 381 AYRSCLPQIKLYGPTNFSPIINHVARFAAAAAQQQTASQYFVLLIITDGVITDLDETRQA 440
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V AS LP+SI+IVGVGGADF+ ME
Sbjct: 441 IVNASRLPMSIIIVGVGGADFSAME 465
>sp|Q7YXU4|CPNA_DICDI Copine-A OS=Dictyostelium discoideum GN=cpnA PE=2 SV=1
Length = 600
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 55/84 (65%)
Query: 4 YASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKDALV 63
Y ++ + L GPT F +IN AAR A Q S KY +L+IITDG + D T DA+V
Sbjct: 377 YYDNISKIQLHGPTYFAPLINMAARYASQGQSQSNQKYTILMIITDGEILDADNTIDAIV 436
Query: 64 RASDLPLSILIVGVGGADFTQMEV 87
++S LPLSI+IVGVG A+FT M +
Sbjct: 437 KSSGLPLSIIIVGVGNANFTNMNI 460
>sp|Q1RLL3|CPNE9_MOUSE Copine-9 OS=Mus musculus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ +Y +L V L GPT F VIN AR A + +S D S+Y+VLLIITDGV++D+ +TK+
Sbjct: 387 LESYFQSLRTVQLYGPTYFAPVINQVARAAAK-IS-DGSQYYVLLIITDGVISDMTQTKE 444
Query: 61 ALVRASDLPLSILIVGVGGADFTQME 86
A+V AS LP+SI+IVGVG A F ME
Sbjct: 445 AIVSASSLPMSIIIVGVGPAMFEAME 470
>sp|Q5BJS7|CPNE9_RAT Copine-9 OS=Rattus norvegicus GN=Cpne9 PE=2 SV=1
Length = 553
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ +Y +L V L GPT F VIN AR A + +S D S+Y+VLLIITDGV++D+ +TK+
Sbjct: 387 LESYFQSLRTVQLYGPTYFAPVINQVARAAAK-IS-DGSQYYVLLIITDGVISDMTQTKE 444
Query: 61 ALVRASDLPLSILIVGVGGADFTQME 86
A+V AS LP+SI+IVGVG A F ME
Sbjct: 445 AIVSASSLPMSIIIVGVGPAMFEAME 470
>sp|Q8IYJ1|CPNE9_HUMAN Copine-9 OS=Homo sapiens GN=CPNE9 PE=1 SV=3
Length = 553
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ +Y +L V L GPT F VIN AR A + +S D S+Y+VLLIITDGV++D+ +TK+
Sbjct: 387 LESYFQSLRTVQLYGPTYFAPVINQVARAAAK-IS-DGSQYYVLLIITDGVISDMTQTKE 444
Query: 61 ALVRASDLPLSILIVGVGGADFTQME 86
A+V AS LP+SI+IVGVG A F ME
Sbjct: 445 AIVSASSLPMSIIIVGVGPAMFEAME 470
>sp|Q8BLR2|CPNE4_MOUSE Copine-4 OS=Mus musculus GN=Cpne4 PE=1 SV=1
Length = 557
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSL-SYDRSKYFVLLIITDGVLTDLQETKDA 61
AY S L + L GPT +I A+ A + + + S+YF+LLI+TDGV+TD+ +T++A
Sbjct: 397 AYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGVITDMADTREA 456
Query: 62 LVRASDLPLSILIVGVGGADFTQMEV 87
+V AS LP+S++IVGVG ADF+ M++
Sbjct: 457 IVHASHLPMSVIIVGVGNADFSDMQM 482
>sp|Q96A23|CPNE4_HUMAN Copine-4 OS=Homo sapiens GN=CPNE4 PE=2 SV=1
Length = 557
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSL-SYDRSKYFVLLIITDGVLTDLQETKDA 61
AY S L + L GPT +I A+ A + + + S+YF+LLI+TDGV+TD+ +T++A
Sbjct: 397 AYQSCLPKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGVITDMADTREA 456
Query: 62 LVRASDLPLSILIVGVGGADFTQMEV 87
+V AS LP+S++IVGVG ADF+ M++
Sbjct: 457 IVHASHLPMSVIIVGVGNADFSDMQM 482
>sp|P59108|CPNE2_MOUSE Copine-2 OS=Mus musculus GN=Cpne2 PE=2 SV=1
Length = 548
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSK-YFVLLIITDGVLTDLQETKDA 61
AY++ L ++ GPT F ++N AR A Q+ + YF+LLIITDGV++D++ET+ A
Sbjct: 397 AYSACLPHIRFYGPTNFSPIVNHVARFAAQATQQQTATQYFILLIITDGVISDMEETRHA 456
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V+AS LP+SI+IVGVG ADF ME
Sbjct: 457 VVQASKLPMSIIIVGVGNADFAAME 481
>sp|Q8JZW4|CPNE5_MOUSE Copine-5 OS=Mus musculus GN=Cpne5 PE=2 SV=1
Length = 593
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ AY S+L V L GPT F V+ AR A + D S+Y VLLIITDGV++D+ +TK+
Sbjct: 416 LEAYHSSLRTVQLYGPTNFAPVVTHVARNA--AAVQDGSQYSVLLIITDGVISDMAQTKE 473
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
A+V A+ LP+SI+IVGVG A+F M
Sbjct: 474 AIVNAAKLPMSIIIVGVGQAEFDAM 498
>sp|Q5R4W6|CPNE6_PONAB Copine-6 OS=Pongo abelii GN=CPNE6 PE=2 SV=1
Length = 557
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETK 59
+A+Y L + L GPT +IN A A + S + +KY VLL++TDGV++D+ ET+
Sbjct: 394 IASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAETR 453
Query: 60 DALVRASDLPLSILIVGVGGADFTQMEV 87
A+VRAS LP+SI+IVGVG ADF+ M +
Sbjct: 454 TAIVRASRLPMSIIIVGVGNADFSDMRL 481
>sp|Q9Z140|CPNE6_MOUSE Copine-6 OS=Mus musculus GN=Cpne6 PE=1 SV=1
Length = 557
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETK 59
+A+Y L + L GPT +IN A A + S + +KY VLL++TDGV++D+ ET+
Sbjct: 394 IASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAETR 453
Query: 60 DALVRASDLPLSILIVGVGGADFTQMEV 87
A+VRAS LP+SI+IVGVG ADF+ M +
Sbjct: 454 TAIVRASRLPMSIIIVGVGNADFSDMRL 481
>sp|O95741|CPNE6_HUMAN Copine-6 OS=Homo sapiens GN=CPNE6 PE=1 SV=3
Length = 557
Score = 82.4 bits (202), Expect = 7e-16, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETK 59
+A+Y L + L GPT +IN A A + S + +KY VLL++TDGV++D+ ET+
Sbjct: 394 IASYRRCLPQIQLYGPTNVAPIINRVAEPAQREQSTGQATKYSVLLVLTDGVVSDMAETR 453
Query: 60 DALVRASDLPLSILIVGVGGADFTQMEV 87
A+VRAS LP+SI+IVGVG ADF+ M +
Sbjct: 454 TAIVRASRLPMSIIIVGVGNADFSDMRL 481
>sp|Q2KHY1|CPNE6_BOVIN Copine-6 OS=Bos taurus GN=CPNE6 PE=2 SV=1
Length = 557
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDR-SKYFVLLIITDGVLTDLQETK 59
+A+Y L + L GPT +IN A A + S + +KY VLL++TDGV++D+ ET+
Sbjct: 394 IASYRRCLPQIQLYGPTNVAPIINRVAGPAQREQSTGQATKYSVLLVLTDGVVSDMAETR 453
Query: 60 DALVRASDLPLSILIVGVGGADFTQMEV 87
A+VRAS LP+SI+IVGVG ADF+ M +
Sbjct: 454 TAIVRASRLPMSIIIVGVGNADFSDMRL 481
>sp|Q9HCH3|CPNE5_HUMAN Copine-5 OS=Homo sapiens GN=CPNE5 PE=1 SV=2
Length = 593
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ AY +L V L GPT F V+ AR A + D S+Y VLLIITDGV++D+ +TK+
Sbjct: 416 LEAYHRSLRTVQLYGPTNFAPVVTHVARNA--AAVQDGSQYSVLLIITDGVISDMAQTKE 473
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
A+V A+ LP+SI+IVGVG A+F M
Sbjct: 474 AIVNAAKLPMSIIIVGVGQAEFDAM 498
>sp|Q8C166|CPNE1_MOUSE Copine-1 OS=Mus musculus GN=Cpne1 PE=1 SV=1
Length = 536
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 3 AYASALNNVALAGPTLFGQVIN-TAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKDA 61
AY AL V L GPT F +IN A A + S+YFVLL++TDG +TD++ T A
Sbjct: 374 AYRQALPQVRLYGPTNFAPIINHVARFAAQAAQQRSASQYFVLLLLTDGAVTDVEATCKA 433
Query: 62 LVRASDLPLSILIVGVGGADFTQME 86
+V AS LP+S++IVGVGGADF ME
Sbjct: 434 VVDASKLPMSVIIVGVGGADFEVME 458
>sp|Q54P51|CPNC_DICDI Copine-C OS=Dictyostelium discoideum GN=cpnC PE=2 SV=1
Length = 539
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTA-ARIAGQSLSYDRSKYFVLLIITDGVLTDLQETK 59
+ Y ++ + +GPT F VI A AR + L Y + KY VLLIITDG + D+ ET
Sbjct: 377 LEMYNRNISKIPFSGPTNFASVIQEAIARASESRLPY-QQKYTVLLIITDGEICDMDETI 435
Query: 60 DALVRASDLPLSILIVGVGGADFTQMEV 87
LV+AS+LPLS++IVGVG + F M +
Sbjct: 436 KCLVQASNLPLSVVIVGVGLSSFENMNL 463
>sp|Q54FY7|CPNE_DICDI Copine-E OS=Dictyostelium discoideum GN=cpnE PE=2 SV=1
Length = 579
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
++ Y + + L+ PT F ++I A + + + + KY +LLI+TDG +TD++ET +
Sbjct: 429 LSTYNKVIPTIKLSYPTNFQEIIKHAHKKSIKGVDSKNQKYTILLILTDGEITDMEETIE 488
Query: 61 ALVRASD-LPLSILIVGVGGADFTQME 86
+V+AS PLSI+IVGVG A F M+
Sbjct: 489 EIVKASSKAPLSIVIVGVGIASFELMK 515
>sp|Q86K21|CPNB_DICDI Copine-B OS=Dictyostelium discoideum GN=cpnB-1 PE=2 SV=1
Length = 530
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ Y + +++L+ PT F +I+ AA+ + ++ KY +LLI+TDG ++D+ ET
Sbjct: 377 LLTYGEVIPSMSLSYPTNFKDIISYAAKKSLDGVTSKSQKYTILLILTDGEISDMNETVH 436
Query: 61 ALVRAS-DLPLSILIVGVGGADFTQM 85
+V+AS PLSI+I+G+G A F M
Sbjct: 437 EIVKASKQSPLSIVIIGIGEATFDNM 462
>sp|Q55GG1|CPND_DICDI Copine-D OS=Dictyostelium discoideum GN=cpnD PE=2 SV=1
Length = 530
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 4 YASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKDALV 63
Y + + + + PT F VI+ A + A +S ++ KY VLLIITDG ++D Q+T D LV
Sbjct: 381 YYNNVLKIPFSYPTNFENVIHHAIKRASKSTQSNQ-KYTVLLIITDGDISDTQKTIDELV 439
Query: 64 RASDLPLSILIVGVGGADFTQMEV 87
AS LS++I+GVG F M++
Sbjct: 440 SASKSALSVVIIGVGNYHFEAMKI 463
>sp|Q9SS90|RGLG1_ARATH E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1
PE=1 SV=1
Length = 489
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLT------- 53
+A Y + + LAGPT F +I A + QS +Y VL+II DG +T
Sbjct: 242 LARYREIVPQLKLAGPTSFAPIIEMAMTVVEQS----SGQYHVLVIIADGQVTRSVDTEH 297
Query: 54 -----DLQETKDALVRASDLPLSILIVGVGGADFTQME 86
Q+T DA+V+AS LPLSI++VGVG + M+
Sbjct: 298 GRLSPQEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQ 335
>sp|Q9LY87|RGLG2_ARATH E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2
PE=1 SV=1
Length = 468
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLT------- 53
++ Y + + LAGPT F +I+ A I QS +Y VL+II DG +T
Sbjct: 208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQS----GGQYHVLVIIADGQVTRSVDTEN 263
Query: 54 -----DLQETKDALVRASDLPLSILIVGVGGADFTQM 85
Q+T DA+V+AS LPLSI++VGVG + M
Sbjct: 264 GQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMM 300
>sp|Q1ZXB3|CPNF_DICDI Copine-F OS=Dictyostelium discoideum GN=cpnF PE=2 SV=1
Length = 550
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 4 YASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKDALV 63
Y A+ + PT +I A R + Q + KY +LLI+ D +TD + T D +V
Sbjct: 391 YDKAIPKIQFTSPTKISSIIEDATRYSLQDFHSTQLKYSILLILIDSDITDYESTVDEIV 450
Query: 64 RASDLPLSILIVGVGGADFTQMEVRNVFQLE 94
AS PLSI+ +GVG F +N+ QL+
Sbjct: 451 EASKAPLSIIFIGVGEYSF-----QNIPQLD 476
>sp|Q09219|CPNA5_CAEEL Copine family protein 5 OS=Caenorhabditis elegans GN=cpna-5 PE=2
SV=2
Length = 717
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
M AY V + VIN R++ +S + Y VL + T G +TDL+E +
Sbjct: 443 MEAYRKTQTMVTPLKESKLSPVINYVTRMSHRS-GFRGLHYHVLALFTRGEVTDLKEIQQ 501
Query: 61 ALVRASDLPLSILIVGVGGADFTQME 86
AL ASD PLSILI+G+G DF+ ++
Sbjct: 502 ALNSASDAPLSILIIGMGDFDFSSLQ 527
>sp|Q09221|CPNA2_CAEEL Copine family protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=4
Length = 7705
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 1 MAAYASALNNVALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETKD 60
+ Y + ++GPT F +I+ A I + + Y +L+I+ DG +T+ + +
Sbjct: 7565 LRVYNEVTPTIEMSGPTNFVPLIDRAIEICKE-----KHSYHILVIVADGQVTNEKINQK 7619
Query: 61 ALVRASDLPLSILIVGVGGADFTQM 85
A+ AS PLSI++VGVG + M
Sbjct: 7620 AIAAASHYPLSIIMVGVGDGPWNMM 7644
>sp|Q7VY73|LEU3_BORPE 3-isopropylmalate dehydrogenase OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=leuB PE=3 SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 41 YFVLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQME 86
+ + ++ DG+ ++ E + +++A DLPL + VGGA F Q E
Sbjct: 3 HQIAVLPGDGIGPEIVEQAERVLKALDLPLELRQAPVGGAAFDQFE 48
>sp|Q7W929|LEU3_BORPA 3-isopropylmalate dehydrogenase OS=Bordetella parapertussis
(strain 12822 / ATCC BAA-587 / NCTC 13253) GN=leuB PE=3
SV=2
Length = 358
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 41 YFVLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQME 86
+ + ++ DG+ ++ E + +++A DLPL + VGGA F Q E
Sbjct: 3 HQIAVLPGDGIGPEIVEQAERVLKALDLPLELRQAPVGGAAFDQFE 48
>sp|Q7WKH4|LEU32_BORBR 3-isopropylmalate dehydrogenase 2 OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=leuB2 PE=3
SV=1
Length = 358
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 41 YFVLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQME 86
+ + ++ DG+ ++ E + +++A DLPL + VGGA F Q E
Sbjct: 3 HQIAVLPGDGIGPEIVEQAERVLKALDLPLELRQAPVGGAAFDQFE 48
>sp|O13302|IDH1_AJECA Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial
OS=Ajellomyces capsulatus GN=IDH1 PE=2 SV=1
Length = 388
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 40 KYFVLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQMEVRNVFQ 92
KY V LI DG+ T++ E+ + +A ++P+ V V G D ++F+
Sbjct: 51 KYTVTLIPGDGIGTEVAESVKTIFKADNVPIEWEQVDVSGLDAGNKHSEDLFK 103
>sp|A1TJA3|CAAL_ACIAC Carboxylate-amine ligase Aave_0434 OS=Acidovorax citrulli (strain
AAC00-1) GN=Aave_0434 PE=3 SV=1
Length = 374
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 51 VLTDLQETKDALVRASDLPLSILIVGVGGADFTQMEVRNVF 91
VL L + +DALVR++D L+I +VG G F Q R ++
Sbjct: 72 VLGQLTQIRDALVRSAD-KLNIAVVGGGTHPFQQWHERRIY 111
>sp|A6H584|CO6A5_MOUSE Collagen alpha-5(VI) chain OS=Mus musculus GN=Col6a5 PE=1 SV=2
Length = 2640
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 43 VLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQME 86
++++ITDGV D + +A D ++I VGVG A+ ++E
Sbjct: 951 LMIVITDGVSHDRDKLDEAARELRDKGITIFAVGVGNANQDELE 994
>sp|Q80YF9|RHG33_MOUSE Rho GTPase-activating protein 33 OS=Mus musculus GN=Arhgap33 PE=1
SV=1
Length = 1305
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 53 TDLQETKDALVRASDLPLSILI--VGVGGAD-FTQMEVRNVFQLEYLLTSIELLFS 105
T + A+V A +L S+ + VG+GGA F ++ V++V +E+LLT +E+LFS
Sbjct: 481 TSMHARNLAIVWAPNLLRSMELESVGLGGAAAFREVRVQSVV-VEFLLTHVEVLFS 535
>sp|A8TX70|CO6A5_HUMAN Collagen alpha-5(VI) chain OS=Homo sapiens GN=COL6A5 PE=1 SV=1
Length = 2615
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 43 VLLIITDGVLTDLQETKDALVRASDLPLSILIVGVGGADFTQME 86
+L++ITDG D + D + + ++I VGVG A+ ++E
Sbjct: 919 MLIVITDGESHDHDQLNDTALELRNKGITIFAVGVGKANQKELE 962
>sp|P44793|COAA_HAEIN Pantothenate kinase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=coaA PE=3 SV=1
Length = 311
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 11 VALAGPTLFGQVINTAARIAGQSLSYDRSKYFVLLIITDGVLTDLQETK-DALVRASDLP 69
+++AG G+ +T+ARI LS+ ++ V LI TDG L L + K D L++ P
Sbjct: 89 ISIAGSVAVGK--STSARILQSLLSHWPTERKVDLITTDGFLYPLNKLKQDNLLQKKGFP 146
Query: 70 LS 71
+S
Sbjct: 147 VS 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,682,108
Number of Sequences: 539616
Number of extensions: 1056533
Number of successful extensions: 2928
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2862
Number of HSP's gapped (non-prelim): 48
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)