Query 033956
Match_columns 107
No_of_seqs 112 out of 323
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 13:41:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ga3_A Interferon-induced heli 94.7 0.031 1E-06 39.9 4.0 87 10-100 12-100 (133)
2 3eqt_A ATP-dependent RNA helic 94.5 0.019 6.4E-07 41.6 2.3 93 7-101 10-104 (145)
3 3lrr_A Probable ATP-dependent 93.5 0.035 1.2E-06 38.9 2.2 89 7-99 2-94 (121)
4 2qfd_A Probable ATP-dependent 93.2 0.11 3.9E-06 37.4 4.6 81 7-99 24-116 (145)
5 3e0o_A Peptide methionine sulf 93.1 0.038 1.3E-06 40.0 1.8 67 8-82 40-106 (144)
6 2kv1_A Methionine-R-sulfoxide 92.9 0.06 2E-06 38.1 2.6 64 9-80 19-82 (124)
7 3hcg_A Peptide methionine sulf 92.7 0.064 2.2E-06 38.9 2.6 68 8-82 41-108 (146)
8 4a2v_A RIG-I, retinoic acid in 92.1 0.08 2.7E-06 37.6 2.5 89 7-99 4-97 (131)
9 3cxk_A Methionine-R-sulfoxide 92.0 0.051 1.8E-06 40.1 1.4 66 9-81 72-137 (164)
10 2kao_A Methionine-R-sulfoxide 91.8 0.11 3.7E-06 36.8 2.8 65 8-80 18-82 (124)
11 3mao_A Methionine-R-sulfoxide 90.9 0.061 2.1E-06 37.0 0.8 65 8-80 11-75 (105)
12 2k8d_A Peptide methionine sulf 90.7 0.056 1.9E-06 39.4 0.4 68 8-82 59-126 (151)
13 3hcj_A MSRB, peptide methionin 88.7 0.058 2E-06 39.4 -0.8 66 9-81 49-114 (154)
14 3e0m_A Peptide methionine sulf 88.4 0.17 5.8E-06 40.6 1.7 68 8-82 207-274 (313)
15 2l1u_A MSRB2, methionine-R-sul 86.3 0.21 7E-06 36.1 0.9 68 8-82 35-109 (143)
16 1fv5_A First zinc finger of U- 65.8 0.71 2.4E-05 25.0 -1.0 23 5-27 3-25 (36)
17 4gl2_A Interferon-induced heli 62.8 1.5 5.1E-05 35.9 -0.1 92 4-100 580-674 (699)
18 1srk_A Zinc finger protein ZFP 56.8 1.8 6.3E-05 21.1 -0.4 21 6-26 3-23 (35)
19 2lvu_A Zinc finger and BTB dom 61.0 2.4 8.1E-05 19.2 0.0 19 9-27 1-19 (26)
20 2elm_A Zinc finger protein 406 53.4 2 6.8E-05 21.6 -0.6 21 6-26 5-25 (37)
21 2elx_A Zinc finger protein 406 53.4 2.1 7.1E-05 20.7 -0.5 21 6-26 3-23 (35)
22 2elp_A Zinc finger protein 406 52.2 3.4 0.00011 20.4 0.2 21 6-26 5-26 (37)
23 1x6m_A GFA, glutathione-depend 51.2 19 0.00067 25.8 4.3 36 46-82 79-114 (196)
24 2ykg_A Probable ATP-dependent 51.0 7.9 0.00027 31.6 2.4 86 10-99 578-667 (696)
25 2elv_A Zinc finger protein 406 51.0 2.6 8.8E-05 20.7 -0.4 21 6-26 5-25 (36)
26 2elq_A Zinc finger protein 406 50.8 2.5 8.6E-05 20.7 -0.5 21 6-26 5-25 (36)
27 2elo_A Zinc finger protein 406 49.2 2 6.8E-05 21.2 -1.0 21 6-26 5-25 (37)
28 2m0e_A Zinc finger and BTB dom 48.9 3.5 0.00012 18.6 -0.1 19 9-27 1-19 (29)
29 2drp_A Protein (tramtrack DNA- 48.1 2.7 9.3E-05 23.5 -0.6 26 2-27 2-27 (66)
30 2yu5_A Zinc finger protein 473 48.1 4 0.00014 21.0 0.1 22 6-27 8-29 (44)
31 2elt_A Zinc finger protein 406 48.0 2.9 9.7E-05 20.4 -0.5 21 6-26 5-25 (36)
32 2epc_A Zinc finger protein 32; 47.6 3 0.0001 21.1 -0.5 22 6-27 7-28 (42)
33 2kvh_A Zinc finger and BTB dom 47.4 2.7 9.2E-05 19.2 -0.6 18 9-26 2-19 (27)
34 1p7a_A BF3, BKLF, kruppel-like 47.4 2.2 7.4E-05 21.1 -1.1 21 6-26 7-27 (37)
35 1rik_A E6APC1 peptide; E6-bind 47.1 3.8 0.00013 18.7 -0.1 18 9-26 1-18 (29)
36 2els_A Zinc finger protein 406 45.4 3.3 0.00011 20.3 -0.5 20 7-26 6-25 (36)
37 2lvr_A Zinc finger and BTB dom 51.2 4.5 0.00015 18.5 0.0 19 9-27 2-20 (30)
38 1njq_A Superman protein; zinc- 45.1 3.1 0.00011 20.9 -0.7 21 7-27 3-23 (39)
39 2lvt_A Zinc finger and BTB dom 50.4 4.7 0.00016 18.5 0.0 19 9-27 1-19 (29)
40 2en2_A B-cell lymphoma 6 prote 43.6 3.2 0.00011 21.1 -0.7 21 6-26 7-27 (42)
41 2yu8_A Zinc finger protein 347 42.7 5.5 0.00019 20.6 0.1 22 6-27 8-29 (46)
42 2epw_A Zinc finger protein 268 41.9 5.7 0.00019 20.5 0.1 22 6-27 8-29 (46)
43 2elr_A Zinc finger protein 406 41.9 3 0.0001 20.2 -1.0 21 6-26 5-25 (36)
44 2kvf_A Zinc finger and BTB dom 41.6 3.6 0.00012 18.7 -0.7 18 9-26 2-19 (28)
45 2ept_A Zinc finger protein 32; 41.4 4.5 0.00015 20.4 -0.4 21 6-26 6-26 (41)
46 2en3_A ZFP-95, zinc finger pro 41.1 6 0.0002 20.5 0.1 22 6-27 8-29 (46)
47 2el5_A Zinc finger protein 268 40.9 4.2 0.00014 20.6 -0.6 22 6-27 6-27 (42)
48 2yte_A Zinc finger protein 473 40.2 3.3 0.00011 21.0 -1.1 22 6-27 6-27 (42)
49 2m0d_A Zinc finger and BTB dom 39.7 4 0.00014 18.5 -0.7 18 9-26 2-19 (30)
50 2eox_A Zinc finger protein 473 39.6 5.8 0.0002 20.3 -0.1 22 6-27 8-29 (44)
51 2eos_A B-cell lymphoma 6 prote 39.4 3.8 0.00013 20.8 -0.9 22 6-27 7-28 (42)
52 3fac_A Putative uncharacterize 39.4 20 0.00067 23.4 2.5 33 48-80 49-81 (118)
53 1iz6_A Initiation factor 5A; S 39.1 19 0.00064 25.0 2.4 32 30-61 33-64 (138)
54 1klr_A Zinc finger Y-chromosom 39.0 4.6 0.00016 18.3 -0.5 18 10-27 2-19 (30)
55 2epv_A Zinc finger protein 268 38.9 4.9 0.00017 20.8 -0.5 22 6-27 8-29 (44)
56 2ytf_A Zinc finger protein 268 38.9 4.9 0.00017 20.8 -0.5 22 6-27 8-29 (46)
57 2eoy_A Zinc finger protein 473 38.8 7 0.00024 20.2 0.2 22 6-27 8-29 (46)
58 3iuf_A Zinc finger protein UBI 38.5 4.9 0.00017 21.6 -0.6 22 6-27 3-24 (48)
59 2yts_A Zinc finger protein 484 38.4 4.9 0.00017 20.8 -0.6 22 6-27 8-29 (46)
60 2eow_A Zinc finger protein 347 38.4 5 0.00017 20.7 -0.5 22 6-27 8-29 (46)
61 2eor_A Zinc finger protein 224 38.2 4.7 0.00016 20.8 -0.6 22 6-27 8-29 (46)
62 2eof_A Zinc finger protein 268 38.1 4.9 0.00017 20.5 -0.6 22 6-27 8-29 (44)
63 2kvg_A Zinc finger and BTB dom 37.4 3.5 0.00012 19.0 -1.2 17 9-25 2-18 (27)
64 1nyp_A Pinch protein; LIM doma 37.4 8 0.00027 22.3 0.3 12 11-22 32-43 (66)
65 2ytp_A Zinc finger protein 484 37.1 5.8 0.0002 20.6 -0.4 22 6-27 8-29 (46)
66 2ely_A Zinc finger protein 224 37.0 8.3 0.00028 19.9 0.3 22 6-27 8-29 (46)
67 2ytg_A ZFP-95, zinc finger pro 36.9 6.9 0.00024 20.2 -0.1 22 6-27 8-29 (46)
68 2yto_A Zinc finger protein 484 36.4 5.8 0.0002 20.6 -0.4 22 6-27 8-29 (46)
69 2ep3_A Zinc finger protein 484 36.4 5.6 0.00019 20.6 -0.5 22 6-27 8-29 (46)
70 2yrj_A Zinc finger protein 473 36.3 6 0.00021 20.4 -0.4 21 6-26 8-28 (46)
71 1paa_A Yeast transcription fac 36.2 4.3 0.00015 18.6 -0.9 17 10-26 2-18 (30)
72 2eif_A IF-5A, protein (eukaryo 36.0 23 0.00077 24.4 2.5 30 32-61 39-68 (136)
73 2em4_A Zinc finger protein 28 36.0 5.7 0.00019 20.6 -0.5 22 6-27 8-29 (46)
74 2em2_A Zinc finger protein 28 35.9 5.8 0.0002 20.6 -0.5 22 6-27 8-29 (46)
75 2ep2_A Zinc finger protein 484 35.9 5.8 0.0002 20.5 -0.5 22 6-27 8-29 (46)
76 2eme_A Zinc finger protein 473 35.8 5.8 0.0002 20.4 -0.5 22 6-27 8-29 (46)
77 2enc_A Zinc finger protein 224 35.8 5.8 0.0002 20.5 -0.5 21 6-26 8-28 (46)
78 2emi_A Zinc finger protein 484 35.7 6.1 0.00021 20.4 -0.4 22 6-27 8-29 (46)
79 2m0f_A Zinc finger and BTB dom 35.4 4.7 0.00016 18.1 -0.8 18 9-26 1-18 (29)
80 2ema_A Zinc finger protein 347 35.4 6.1 0.00021 20.4 -0.5 21 6-26 8-28 (46)
81 3uk3_C Zinc finger protein 217 35.4 4 0.00014 22.0 -1.3 21 7-27 1-21 (57)
82 2eoo_A ZFP-95, zinc finger pro 35.3 6.4 0.00022 20.4 -0.4 22 6-27 8-29 (46)
83 2enf_A Zinc finger protein 347 35.3 4.9 0.00017 20.8 -0.9 22 6-27 8-29 (46)
84 2eq0_A Zinc finger protein 347 35.3 6 0.0002 20.5 -0.5 22 6-27 8-29 (46)
85 1vd4_A Transcription initiatio 35.1 14 0.00046 20.8 1.0 19 6-24 10-28 (62)
86 2ytb_A Zinc finger protein 32; 34.9 4.4 0.00015 20.4 -1.1 22 6-27 7-28 (42)
87 2emp_A Zinc finger protein 347 34.9 6.3 0.00022 20.3 -0.5 22 6-27 8-29 (46)
88 2iyb_E Testin, TESS, TES; LIM 34.7 7.7 0.00026 22.6 -0.1 13 9-21 31-43 (65)
89 2em3_A Zinc finger protein 28 34.7 6 0.00021 20.4 -0.6 22 6-27 8-29 (46)
90 1x61_A Thyroid receptor intera 34.7 12 0.0004 21.9 0.7 11 11-21 34-44 (72)
91 2yth_A Zinc finger protein 224 34.7 4.9 0.00017 20.9 -0.9 22 6-27 8-29 (46)
92 2emb_A Zinc finger protein 473 34.6 5.7 0.0002 20.3 -0.7 21 6-26 8-28 (44)
93 2ene_A Zinc finger protein 347 34.6 6.1 0.00021 20.4 -0.5 22 6-27 8-29 (46)
94 2ytk_A Zinc finger protein 347 34.6 5.9 0.0002 20.5 -0.6 22 6-27 8-29 (46)
95 2ytj_A Zinc finger protein 484 34.4 6.2 0.00021 20.4 -0.6 22 6-27 8-29 (46)
96 2emf_A Zinc finger protein 484 34.3 6.6 0.00023 20.3 -0.4 22 6-27 8-29 (46)
97 2yrm_A B-cell lymphoma 6 prote 34.2 5.2 0.00018 20.6 -0.9 22 6-27 6-27 (43)
98 2el6_A Zinc finger protein 268 34.1 6.5 0.00022 20.4 -0.5 22 6-27 8-29 (46)
99 2em6_A Zinc finger protein 224 34.0 5.6 0.00019 20.6 -0.8 22 6-27 8-29 (46)
100 2en1_A Zinc finger protein 224 34.0 5.4 0.00018 20.6 -0.8 21 6-26 8-28 (46)
101 1ogy_B Diheme cytochrome C NAP 33.6 14 0.00047 26.1 1.0 29 8-36 93-121 (130)
102 2emh_A Zinc finger protein 484 33.5 6.2 0.00021 20.4 -0.6 22 6-27 8-29 (46)
103 2eq4_A Zinc finger protein 224 33.3 5.5 0.00019 20.5 -0.9 22 6-27 8-29 (46)
104 2emj_A Zinc finger protein 28 33.1 6.8 0.00023 20.3 -0.5 21 6-26 8-28 (46)
105 2emy_A Zinc finger protein 268 33.1 6.9 0.00024 20.2 -0.5 22 6-27 8-29 (46)
106 2emx_A Zinc finger protein 268 33.0 7.2 0.00024 19.9 -0.4 22 6-27 6-27 (44)
107 2em8_A Zinc finger protein 224 32.5 6.8 0.00023 20.3 -0.6 22 5-26 7-28 (46)
108 2eoz_A Zinc finger protein 473 32.3 5.8 0.0002 20.6 -0.9 22 6-27 8-29 (46)
109 2en6_A Zinc finger protein 268 32.3 6 0.00021 20.4 -0.8 21 6-26 8-28 (46)
110 2ep0_A Zinc finger protein 28 32.3 7 0.00024 20.2 -0.5 21 6-26 8-28 (46)
111 2ytn_A Zinc finger protein 347 32.2 5.5 0.00019 20.6 -1.0 22 6-27 8-29 (46)
112 2eop_A Zinc finger protein 268 32.2 5.5 0.00019 20.5 -1.0 22 6-27 8-29 (46)
113 3cpf_A Eukaryotic translation 32.0 25 0.00084 24.3 2.1 32 30-61 33-64 (138)
114 2eoj_A Zinc finger protein 268 31.9 5.1 0.00017 20.5 -1.2 22 6-27 8-29 (44)
115 2eml_A Zinc finger protein 28 31.8 7.1 0.00024 20.1 -0.6 22 6-27 8-29 (46)
116 2ytq_A Zinc finger protein 268 31.7 6.2 0.00021 20.5 -0.8 22 6-27 8-29 (46)
117 1bkb_A Translation initiation 31.7 31 0.001 23.6 2.6 31 31-61 36-66 (136)
118 2el4_A Zinc finger protein 268 31.6 7.3 0.00025 20.0 -0.6 22 6-27 8-29 (46)
119 2em7_A Zinc finger protein 224 31.5 7.2 0.00025 20.1 -0.6 22 6-27 8-29 (46)
120 2ytd_A Zinc finger protein 473 31.5 7.5 0.00026 20.0 -0.5 21 6-26 8-28 (46)
121 1yui_A GAGA-factor; complex (D 31.5 7.2 0.00025 21.1 -0.6 21 6-26 20-40 (54)
122 2ctu_A Zinc finger protein 483 31.3 22 0.00077 19.5 1.6 23 6-28 14-36 (73)
123 2em5_A ZFP-95, zinc finger pro 31.1 7.5 0.00026 20.1 -0.6 22 6-27 8-29 (46)
124 2elz_A Zinc finger protein 224 31.1 6.3 0.00022 20.4 -0.9 22 6-27 8-29 (46)
125 2emm_A ZFP-95, zinc finger pro 31.0 7.2 0.00025 20.0 -0.7 21 6-26 8-28 (46)
126 2en7_A Zinc finger protein 268 30.9 4.8 0.00016 20.5 -1.4 22 6-27 8-29 (44)
127 2en9_A Zinc finger protein 28 30.9 6 0.0002 20.5 -1.0 22 6-27 8-29 (46)
128 2epu_A Zinc finger protein 32; 30.8 6.4 0.00022 20.3 -0.9 21 6-26 8-28 (45)
129 2yso_A ZFP-95, zinc finger pro 30.6 8.2 0.00028 19.9 -0.5 22 6-27 8-29 (46)
130 2egq_A FHL1 protein; LIM domai 30.5 9.8 0.00034 22.5 -0.2 11 12-22 17-27 (77)
131 3er0_A Eukaryotic translation 30.4 36 0.0012 24.5 2.9 32 30-61 57-88 (167)
132 3izc_U 60S ribosomal protein R 30.2 26 0.00089 25.4 2.1 36 28-63 54-96 (160)
133 2eln_A Zinc finger protein 406 30.1 9 0.00031 20.5 -0.4 21 6-26 5-27 (38)
134 1ard_A Yeast transcription fac 30.0 5 0.00017 18.1 -1.3 18 9-26 1-18 (29)
135 2enh_A Zinc finger protein 28 29.9 8.6 0.00029 19.9 -0.5 22 6-27 8-29 (46)
136 2d8z_A Four and A half LIM dom 29.9 13 0.00043 21.6 0.3 11 11-21 32-42 (70)
137 2emg_A Zinc finger protein 484 29.8 6.1 0.00021 20.4 -1.1 22 6-27 8-29 (46)
138 4a2w_A RIG-I, retinoic acid in 29.6 11 0.00038 32.9 0.0 86 10-99 812-902 (936)
139 2em9_A Zinc finger protein 224 29.6 8.1 0.00028 19.8 -0.6 22 6-27 8-29 (46)
140 2eq3_A Zinc finger protein 347 29.3 5.4 0.00018 20.6 -1.4 22 6-27 8-29 (46)
141 2eq2_A Zinc finger protein 347 29.2 5.4 0.00018 20.6 -1.4 22 6-27 8-29 (46)
142 2eon_A ZFP-95, zinc finger pro 29.1 6.1 0.00021 20.5 -1.2 22 6-27 8-29 (46)
143 2eod_A TNF receptor-associated 28.7 17 0.0006 20.3 0.7 17 7-23 33-50 (66)
144 1x68_A FHL5 protein; four-and- 28.7 14 0.0005 21.9 0.4 11 11-21 36-46 (76)
145 1x4l_A Skeletal muscle LIM-pro 28.6 16 0.00055 21.3 0.6 11 11-21 36-46 (72)
146 1a7i_A QCRP2 (LIM1); LIM domai 28.5 22 0.00074 21.3 1.2 12 11-22 35-46 (81)
147 2eq1_A Zinc finger protein 347 28.5 6.9 0.00024 20.2 -1.0 22 6-27 8-29 (46)
148 2xqn_T Testin, TESS; metal-bin 28.5 17 0.00058 23.5 0.7 27 10-42 30-56 (126)
149 2yti_A Zinc finger protein 347 28.4 5.5 0.00019 20.6 -1.5 22 6-27 8-29 (46)
150 2eoh_A Zinc finger protein 28 28.3 6.7 0.00023 20.3 -1.1 22 6-27 8-29 (46)
151 2eom_A ZFP-95, zinc finger pro 28.3 7.3 0.00025 20.2 -0.9 22 6-27 8-29 (46)
152 2epx_A Zinc finger protein 28 28.3 7.4 0.00025 20.0 -0.9 22 6-27 8-29 (47)
153 2en8_A Zinc finger protein 224 28.2 8.7 0.0003 19.7 -0.6 22 6-27 8-29 (46)
154 2jr6_A UPF0434 protein NMA0874 28.2 19 0.00064 22.4 0.8 37 9-49 7-46 (68)
155 2eoe_A Zinc finger protein 347 28.2 5.8 0.0002 20.4 -1.4 22 6-27 8-29 (46)
156 2epq_A POZ-, at HOOK-, and zin 28.1 5.8 0.0002 20.5 -1.4 22 6-27 6-27 (45)
157 2ysp_A Zinc finger protein 224 28.0 7.8 0.00027 20.0 -0.9 21 6-26 8-28 (46)
158 2cur_A Skeletal muscle LIM-pro 27.7 14 0.00049 21.4 0.2 11 11-21 32-42 (69)
159 1wyh_A SLIM 2, skeletal muscle 27.6 19 0.00066 20.8 0.8 12 11-22 34-45 (72)
160 2emk_A Zinc finger protein 28 27.4 7.7 0.00026 20.1 -1.0 22 6-27 8-29 (46)
161 2ehe_A Four and A half LIM dom 27.4 14 0.00049 22.1 0.2 17 12-28 17-33 (82)
162 2eou_A Zinc finger protein 473 26.8 7.5 0.00026 19.9 -1.0 22 6-27 8-29 (44)
163 4gzn_C ZFP-57, zinc finger pro 26.6 9.9 0.00034 22.2 -0.6 21 6-26 28-48 (60)
164 2emz_A ZFP-95, zinc finger pro 26.6 7.5 0.00026 20.1 -1.1 22 6-27 8-29 (46)
165 2ep1_A Zinc finger protein 484 26.6 6.9 0.00024 20.1 -1.2 22 6-27 8-29 (46)
166 2hf1_A Tetraacyldisaccharide-1 26.5 19 0.00065 22.3 0.7 36 10-49 8-46 (68)
167 2eoq_A Zinc finger protein 224 26.4 7.8 0.00027 20.0 -1.0 22 6-27 8-29 (46)
168 2em0_A Zinc finger protein 224 26.4 8.5 0.00029 19.8 -0.9 22 6-27 8-29 (46)
169 1bbo_A Human enhancer-binding 25.9 11 0.00039 20.0 -0.4 21 6-26 25-45 (57)
170 2eps_A POZ-, at HOOK-, and zin 25.8 11 0.00038 20.4 -0.5 22 6-27 8-29 (54)
171 2d9h_A Zinc finger protein 692 25.8 12 0.00039 21.5 -0.4 21 6-26 3-23 (78)
172 2ytm_A Zinc finger protein 28 25.7 6.4 0.00022 20.5 -1.5 22 6-27 8-29 (46)
173 3jyw_Q 60S ribosomal protein L 25.3 18 0.00063 25.0 0.5 34 29-62 54-94 (116)
174 1rim_A E6APC2 peptide; E6-bind 25.2 7.5 0.00026 18.9 -1.2 18 9-26 1-18 (33)
175 3hks_A EIF-5A-2, eukaryotic tr 25.0 46 0.0016 24.0 2.6 31 31-61 56-86 (167)
176 1ncs_A Peptide M30F, transcrip 24.6 34 0.0012 17.8 1.4 22 6-27 14-37 (47)
177 2ytr_A Zinc finger protein 347 24.6 6.4 0.00022 20.3 -1.6 22 6-27 8-29 (46)
178 2eov_A Zinc finger protein 484 24.4 9.4 0.00032 19.6 -1.0 22 6-27 8-29 (46)
179 2epz_A Zinc finger protein 28 24.1 8.4 0.00029 19.8 -1.2 22 6-27 8-29 (46)
180 1va1_A Transcription factor SP 23.7 14 0.00046 18.2 -0.4 21 6-26 4-26 (37)
181 2ytt_A Zinc finger protein 473 23.7 7.6 0.00026 20.1 -1.5 22 6-27 8-29 (46)
182 1bhi_A CRE-BP1, ATF-2; CRE bin 23.4 14 0.00046 18.0 -0.4 21 6-26 2-24 (38)
183 1twf_J DNA-directed RNA polyme 23.1 8.4 0.00029 24.5 -1.5 18 65-82 3-20 (70)
184 4a17_P RPL21, 60S ribosomal pr 23.1 27 0.00092 25.3 1.0 36 28-63 54-96 (157)
185 2yt9_A Zinc finger-containing 22.8 20 0.00068 21.0 0.2 22 6-27 3-24 (95)
186 1x6o_A Eukaryotic initiation f 22.6 43 0.0015 24.3 2.0 32 30-61 57-88 (174)
187 1x5w_A Zinc finger protein 64, 22.6 14 0.00048 20.7 -0.5 21 6-26 5-25 (70)
188 1zr9_A Zinc finger protein 593 22.4 6.6 0.00023 27.3 -2.3 26 3-28 43-68 (124)
189 2lt7_A Transcriptional regulat 22.3 13 0.00045 24.6 -0.8 23 5-27 17-39 (133)
190 1x3h_A Leupaxin; paxillin fami 22.3 32 0.0011 20.3 1.1 12 11-22 42-53 (80)
191 2pk7_A Uncharacterized protein 22.0 54 0.0018 20.2 2.1 36 10-49 8-46 (69)
192 1jni_A NAPB;, diheme cytochrom 21.9 19 0.00065 25.1 -0.0 28 8-35 92-119 (123)
193 1iml_A CRIP, cysteine rich int 21.8 29 0.00099 20.4 0.8 25 10-40 27-51 (76)
194 1g47_A Pinch protein; LIM doma 21.7 19 0.00066 21.1 -0.0 16 12-27 13-28 (77)
195 1zfd_A SWI5; DNA binding motif 21.7 14 0.00049 17.1 -0.5 18 9-26 2-21 (32)
196 2ct1_A Transcriptional repress 21.6 15 0.0005 21.1 -0.6 22 6-27 11-32 (77)
197 2cu8_A Cysteine-rich protein 2 21.5 21 0.00071 21.1 0.1 11 11-21 37-47 (76)
198 1loi_A Cyclic 3',5'-AMP specif 21.5 13 0.00044 19.2 -0.7 14 65-78 4-19 (26)
199 1wig_A KIAA1808 protein; LIM d 21.5 30 0.001 20.5 0.8 12 11-22 32-43 (73)
200 1znf_A 31ST zinc finger from X 21.3 9.6 0.00033 16.9 -1.2 17 10-26 1-17 (27)
201 1x6e_A Zinc finger protein 24; 21.3 16 0.00055 20.7 -0.4 21 6-26 10-30 (72)
202 3sjl_A Methylamine utilization 21.1 16 0.00056 29.4 -0.6 30 5-34 23-60 (373)
203 4ayb_P DNA-directed RNA polyme 20.9 33 0.0011 20.3 0.9 17 9-25 2-18 (48)
204 2adr_A ADR1; transcription reg 20.9 13 0.00045 20.0 -0.8 20 7-26 27-46 (60)
205 2ab3_A ZNF29; zinc finger prot 20.5 12 0.00041 16.7 -1.0 18 9-26 1-20 (29)
206 1f2i_G Fusion of N-terminal 17 20.4 16 0.00055 20.5 -0.6 7 8-14 17-23 (73)
207 3j21_R 50S ribosomal protein L 20.2 48 0.0016 22.1 1.7 14 29-42 56-69 (97)
208 2epp_A POZ-, at HOOK-, and zin 20.2 14 0.00048 22.2 -0.9 23 6-28 9-31 (66)
No 1
>3ga3_A Interferon-induced helicase C domain-containing protein 1, MDA5; innate immune receptor, RNA biniding, RLR, alternative splicing, antiviral defense; 1.45A {Homo sapiens} PDB: 2rqb_A
Probab=94.74 E-value=0.031 Score=39.92 Aligned_cols=87 Identities=15% Similarity=0.170 Sum_probs=54.0
Q ss_pred eEEeecCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEeecccc
Q 033956 10 LYSCHNCRNHVALHDDIISK--AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYERAFEAS 87 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk--~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~e~s 87 (107)
.+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+..-+...+. ..+...-..|.|. |+..+|-....---+=
T Consensus 12 kllCrkC~~~~C~g~DIR~ie~~HhVnv~p~F--~~~y~~~~~~~~~k~-f~d~~~~g~I~C~-Cgq~WG~~m~yk~~~L 87 (133)
T 3ga3_A 12 TFLCKNCSVLACSGEDIHVIEKMHHVNMTPEF--KELYIVRENKALQKK-CADYQINGEIICK-CGQAWGTMMVHKGLDL 87 (133)
T ss_dssp EEEETTTCCEEEEGGGCEEETTTEEECCCTGG--GGSEEEECCTTTCEE-CSSCEEEEEEEET-TSCEEEEEEEETTEEE
T ss_pred EEEccCCCeeEEeccceEEeccceEEeeChhh--eeeEEecCCCCccch-hccccCCceEEEe-cCChhhhhEEeccccC
Confidence 58999999999999997543 1111112221 234434422222233 4667888899999 9999997765433333
Q ss_pred cccccceEEEEec
Q 033956 88 QKYKEGKFIFEKS 100 (107)
Q Consensus 88 qkYKEGkfILE~~ 100 (107)
=-.|.-.|+||-.
T Consensus 88 P~LkIksFVve~~ 100 (133)
T 3ga3_A 88 PCLKIRNFVVVFK 100 (133)
T ss_dssp EEECGGGEEEEET
T ss_pred ceEEEEEEEEEcC
Confidence 4456677777753
No 2
>3eqt_A ATP-dependent RNA helicase DHX58; innate immunity, RIG-I-like helicases, viral RNA detection, LGP2/dsRNA complex, ATP-binding, coiled coil; 2.00A {Homo sapiens} PDB: 2w4r_A 2rqa_A
Probab=94.46 E-value=0.019 Score=41.59 Aligned_cols=93 Identities=19% Similarity=0.225 Sum_probs=55.1
Q ss_pred CCCeEEeecCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEeec
Q 033956 7 GPRLYSCHNCRNHVALHDDIISK--AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYERAF 84 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liSk--~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~ 84 (107)
..-.+.|++|.+.+++.+||-.- +-+=.-+++ |...+.+..+|..-.....+...-..|.|..|+..+|-....--
T Consensus 10 s~vkllCrkC~~~~C~g~DIr~ie~~HhVnv~p~--F~~~y~~~~~~~~~~k~f~d~~~~g~I~C~~Cgq~WG~~m~yk~ 87 (145)
T 3eqt_A 10 EHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPN--FSNYYNVSRDPVVINKVFKDWKPGGVISCRNCGEVWGLQMIYKS 87 (145)
T ss_dssp GGCEEEETTTCCEEEEGGGEEEETTTEEEECCGG--GGGGEEEEEEECCCSSCCSSEEEEEEEEETTTCCEEEEEEEETT
T ss_pred hheEEECCCCCeeEEeccceEEeccceEEeeChh--heeeEEeccCCCCCCcccccccCCcEEEchhhChhhHhhEEecc
Confidence 34469999999999999997543 111001111 12333332232221111345567788999999999997765443
Q ss_pred ccccccccceEEEEecc
Q 033956 85 EASQKYKEGKFIFEKSK 101 (107)
Q Consensus 85 e~sqkYKEGkfILE~~~ 101 (107)
-+==-.|.-.|++|...
T Consensus 88 ~~LP~LkIksFVve~~~ 104 (145)
T 3eqt_A 88 VKLPVLKVRSMLLETPQ 104 (145)
T ss_dssp EEEEEECGGGEEEEETT
T ss_pred ccCceEeEEEEEEEcCC
Confidence 33445677778887643
No 3
>3lrr_A Probable ATP-dependent RNA helicase DDX58; innate immunity, viral RNA, RIG-I like receptors, antiviral ATP-binding, helicase, hydrolase; HET: ATP; 2.15A {Homo sapiens} PDB: 3lrn_A* 3og8_A 2rmj_A 3ncu_A*
Probab=93.53 E-value=0.035 Score=38.93 Aligned_cols=89 Identities=18% Similarity=0.328 Sum_probs=55.3
Q ss_pred CCCeEEeecCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEe
Q 033956 7 GPRLYSCHNCRNHVALHDDIISK--AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCS--DCREVLGWKYER 82 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liSk--~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 82 (107)
|+..+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+...+. .+. .-+.+.-..|.|. .|+..+|-....
T Consensus 2 ~~~~llC~kC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 77 (121)
T 3lrr_A 2 ENKKLLCRKCKALACYTADVRVIEESHYTVLGDAF--KECFVSRPHPK-PKQ-FSSFEKRAKIFCARQNCSHDWGIHVKY 77 (121)
T ss_dssp CCEEEEETTTCCEEEEGGGEEEETTTEEEECSHHH--HTTEEEEECSS-CCE-ETTEEEEEEEEECSTTTCCEEEEEEEE
T ss_pred CCEEEECCCCCeEEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhheEEe
Confidence 56779999999999999997432 1111111111 22333322222 222 2456788889999 999999977654
Q ss_pred ecccccccccceEEEEe
Q 033956 83 AFEASQKYKEGKFIFEK 99 (107)
Q Consensus 83 A~e~sqkYKEGkfILE~ 99 (107)
---+==-.|.-.|+||.
T Consensus 78 k~~~LP~LkI~sfvve~ 94 (121)
T 3lrr_A 78 KTFEIPVIKIESFVVED 94 (121)
T ss_dssp TTEEEEEECGGGEEEEE
T ss_pred ccccCceEEEEEEEEEe
Confidence 43334456777788876
No 4
>2qfd_A Probable ATP-dependent RNA helicase DDX58; zinc finger, alternative splicing, antiviral defense, ATP- binding, hydrolase, immune response; 2.70A {Homo sapiens} PDB: 2qfb_A
Probab=93.20 E-value=0.11 Score=37.41 Aligned_cols=81 Identities=19% Similarity=0.386 Sum_probs=53.4
Q ss_pred CCCeEEeecCcCCCCCCCCe----------eeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCC
Q 033956 7 GPRLYSCHNCRNHVALHDDI----------ISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCS--DCRE 74 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~l----------iSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~ 74 (107)
+.-.+.|++|.+.+++.+|| +.+.|. ..+.+..-+.+. ..-+...-..|+|. .|+.
T Consensus 24 ~~v~llCrkC~~~~C~g~DIrvie~~HhV~v~p~F~----------~~y~v~~~~~~k--~f~d~~~~g~I~C~~~~Cg~ 91 (145)
T 2qfd_A 24 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK----------ECFVSRPHPKPK--QFSSFEKRAKIFCARQNCSH 91 (145)
T ss_dssp CCCEEEETTTCCEEEEGGGEEEETTTEEEECSTTGG----------GTEEEEECSSCC--CCSSEEEEEEEEECSTTTCC
T ss_pred cceEEEccCCCeeEEcccceeEecCCcEEecCcCce----------eeEEEcCCcccc--hhhceeCCceEEeCCcccCc
Confidence 34459999999999999998 334443 222233111111 14455677899999 9999
Q ss_pred ceeeEEEeecccccccccceEEEEe
Q 033956 75 VLGWKYERAFEASQKYKEGKFIFEK 99 (107)
Q Consensus 75 ~lGWkY~~A~e~sqkYKEGkfILE~ 99 (107)
.+|-....---+-=-.|.-.|+||.
T Consensus 92 ~WG~~m~yk~~~lP~LkIksFVv~~ 116 (145)
T 2qfd_A 92 DWGIHVKYKTFEIPVIKIESFVVED 116 (145)
T ss_dssp EEEEEEEETTEEEEEECGGGEEEEC
T ss_pred chhceEEEccccCceEEEEEEEEEe
Confidence 9997665433334456777888885
No 5
>3e0o_A Peptide methionine sulfoxide reductase MSRB; oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.88.1.3 PDB: 1xm0_A 2kzn_A
Probab=93.06 E-value=0.038 Score=39.99 Aligned_cols=67 Identities=16% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYER 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=++++ -|....|=--.+..+.+ .+...+|++ -|+.. ..|.|..|+..||=-...
T Consensus 40 ~G~Y~C~~Cg~pLF~S~~----KfdSg~GWPSF~~pi~~-~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 106 (144)
T 3e0o_A 40 EGLYVDIVSGKPLFTSKD----KFDSQCGWPSFTKPIEE-EVEEKLDTS--HGMIR-TEVRSRTADSHLGHVFND 106 (144)
T ss_dssp SEEEEETTTCCEEEETTT----BCCCTTSSCEESCCSTT-TEEEEEECC--TTSCE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEeCCCCcccccCcc----cccCCCCCcccCchhcc-ceEEeecCC--CCceE-EEEEcCCCCCccCCccCC
Confidence 347999999999977764 35555665444554444 333344432 24432 479999999999966543
No 6
>2kv1_A Methionine-R-sulfoxide reductase B1; MSRB1, SELR, metal-binding, nucleus, oxidoreductase, seleniu; NMR {Mus musculus}
Probab=92.92 E-value=0.06 Score=38.10 Aligned_cols=64 Identities=13% Similarity=0.292 Sum_probs=38.3
Q ss_pred CeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033956 9 RLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
-+|.|+.|.++|=++++= |....|=.-.++.+-.-.+-..+++ .|+. ...|.|+.|+..||=-.
T Consensus 19 G~Y~C~~Cg~pLF~S~~K----fdSg~GWPSF~~~i~~~~v~~~~d~---~~~~-r~Ev~C~~Cg~HLGHVF 82 (124)
T 2kv1_A 19 GVYVCAKCSYELFSSHSK----YAHSSPWPAFTETIHPDSVTKCPEK---NRPE-ALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp EEEEETTTCCBCCCTTSC----CCCCSSSCCBSCCCCCSSCEEEECS---SSTT-CEEEECTTTTCCCEEEC
T ss_pred EEEEecCCCCcccccCCc----ccCCCCCceeecccccceEEEEecc---CCce-EEEEEEecCCCccCCcc
Confidence 489999999999888753 5545554333333321111112222 1221 35799999999999544
No 7
>3hcg_A Peptide methionine sulfoxide reductase MSRA/MSRB; PILB, methionine sulfoxide reductase B, reduced form, disulfide bond; 1.82A {Neisseria meningitidis serogroup A} SCOP: b.88.1.3 PDB: 3hch_A* 1l1d_A
Probab=92.70 E-value=0.064 Score=38.86 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=43.0
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYER 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=++++ -|....|=--.++.+-.-.+...+|+++ |+. =..|.|..|+..||=-...
T Consensus 41 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~s~--gm~-RtEV~C~~Cg~HLGHVF~D 108 (146)
T 3hcg_A 41 PGIYVDVVSGEPLFSSAD----KYDSGCGWPSFTRPIDAKSVTEHDDFSY--NMR-RTEVRSHAADSHLGHVFPD 108 (146)
T ss_dssp SEEEEETTTCCEEEEGGG----EECCSSSSCEESSCSSGGGEEEEEEEET--TEE-EEEEEETTTCCEEEEEESC
T ss_pred CEEEEecCCCcccccCcc----cccCCCCChhhccccCCCceEEeecCCC--CcE-EEEEEeCCCCCccCceeCC
Confidence 348999999999877653 4665566555455443222222334332 443 3588999999999966643
No 8
>4a2v_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 1.44A {Anas platyrhynchos} PDB: 4a2x_A
Probab=92.15 E-value=0.08 Score=37.61 Aligned_cols=89 Identities=20% Similarity=0.331 Sum_probs=51.9
Q ss_pred CCCeEEeecCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEe
Q 033956 7 GPRLYSCHNCRNHVALHDDIISK--AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCS--DCREVLGWKYER 82 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~liSk--~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 82 (107)
|+..+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+...+. .+. .-+.+.-..|.|. .|+..+|-....
T Consensus 4 ~~~kllCrkC~~~vC~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 79 (131)
T 4a2v_A 4 GQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAF--KERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKY 79 (131)
T ss_dssp -CCEEEETTTCCEEEEGGGEEEETTTEEEECSSGG--GGGEEEEECCC-CCC-TTSEEEEEEEEESCTTTCCEEEEEEEE
T ss_pred cceEEEccCCCeeEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhhhEee
Confidence 56789999999999999997432 1110111111 12222322222 122 3456778889999 999998876543
Q ss_pred eccc-ccccccceEEEEe
Q 033956 83 AFEA-SQKYKEGKFIFEK 99 (107)
Q Consensus 83 A~e~-sqkYKEGkfILE~ 99 (107)
---+ ==-.|.-.|++|.
T Consensus 80 k~~~~LP~LkIksFVve~ 97 (131)
T 4a2v_A 80 LTFDNLPVIKIKSFVMES 97 (131)
T ss_dssp TTEEEEEEECGGGEEECC
T ss_pred cCcccCceEeEEEEEEEe
Confidence 2222 2246677777775
No 9
>3cxk_A Methionine-R-sulfoxide reductase; structural genomics, MSRB, oxidoreductase, MIC labcard, PSI-2, protein structure initiative; 1.70A {Burkholderia pseudomallei strain} PDB: 3cez_A
Probab=92.04 E-value=0.051 Score=40.06 Aligned_cols=66 Identities=21% Similarity=0.452 Sum_probs=42.7
Q ss_pred CeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033956 9 RLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYE 81 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 81 (107)
-+|.|+.|.++|=++++ -|....|=.-.++.+.+-.+...+|+. -|+. -..|.|..|+..||=-..
T Consensus 72 GiY~C~~Cg~pLF~S~~----KFdSGcGWPSF~~pi~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 137 (164)
T 3cxk_A 72 GIYHCVVCGTALFESGA----KYHSGCGWPSYFKPIDGEVIDEKMDYT--HGMT-RVEVRCNQCGAHLGHVFE 137 (164)
T ss_dssp EEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSTTSEEEEEECG--GGCC-EEEEEETTTCCEEEEEES
T ss_pred eEEEccCCCccccCCch----hccCCCCCcccCcccCCCceEEeECCC--CCcE-EEEEEeCCCCCccCcccC
Confidence 48999999999977764 365556655555554332222333332 2443 457999999999996553
No 10
>2kao_A Methionine-R-sulfoxide reductase B1; mouse reduced methionine sulfoxide reductase B1 (MSRB1) (SEC95Cys mutant, selenocysteine; NMR {Mus musculus} PDB: 2kv1_A
Probab=91.83 E-value=0.11 Score=36.79 Aligned_cols=65 Identities=14% Similarity=0.342 Sum_probs=38.6
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
+-+|.|+.|.++|=++++ -|....|=.-.++.+..-.+...+|.. + +.-..|.|..|+..||=-.
T Consensus 18 ~GiY~C~~Cg~pLF~S~~----KFdSG~GWPSF~~pi~~~~v~~~~D~~---~-~~RtEV~C~~Cg~HLGHVF 82 (124)
T 2kao_A 18 PGVYVCAKCSYELFSSHS----KYAHSSPWPAFTETIHPDSVTKCPEKN---R-PEALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp CCEEEESSSCCCCCCTTT----SCCCCCSSCCBSCCCCCSSCEEEECSS---C-TTCEEEECTTTTCCCEEEC
T ss_pred CEEEEeCCCCCccccCcc----cccCCCCChhhCccCCccceEEEecCC---C-CCEEEEEeCCCCCcCCccC
Confidence 458999999999988875 344444544334433211111111211 1 1236899999999999655
No 11
>3mao_A Methionine-R-sulfoxide reductase B1; oxidoreductase, structural genomics consortium, SGC, cytoplasm, metal-binding, nucleus, selenocysteine, zinc; HET: MLI; 1.42A {Homo sapiens}
Probab=90.92 E-value=0.061 Score=37.02 Aligned_cols=65 Identities=14% Similarity=0.355 Sum_probs=39.6
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
+-+|.|+.|.++|=++++ -|....|=.-.++.+..-.+...+|. .++ .-..|.|..|+..||=-.
T Consensus 11 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~---~~~-~RtEV~C~~C~~HLGHVF 75 (105)
T 3mao_A 11 PGVYVCAKCGYELFSSRS----KYAHSSPWPAFTETIHADSVAKRPEH---NRS-EALKVSCGKCGNGLGHEF 75 (105)
T ss_dssp SEEEEETTTCCEEEEGGG----EECCSSSSCEESCCSSTTSEEEEECT---TST-TEEEEEETTTCCEEEEEE
T ss_pred CEEEEcCCCCCccccCCc----ccCCCCCChhhccccCCCceEEEecC---CCC-CEEEEEeCCCCCccCccc
Confidence 347999999999877664 35555565444544421111111221 121 236899999999999665
No 12
>2k8d_A Peptide methionine sulfoxide reductase MSRB; thermophilic, Zn binding, metal-binding, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=90.69 E-value=0.056 Score=39.38 Aligned_cols=68 Identities=19% Similarity=0.496 Sum_probs=43.3
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYER 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
.-+|.|+.|.++|=++++ -|....|=--.++.+..-.+...+|+. -|+.. ..|.|..|+..||--...
T Consensus 59 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~V~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 126 (151)
T 2k8d_A 59 DGIYRCICCGTDLFDSET----KFDSGTGWPSFYDVVSEHNIKLREDRS--LGMVR-CEVLCARCDAHLGHVFDD 126 (151)
T ss_dssp CSEEEETTTTEEEEEGGG----SCCSTTCCSEESCCSCTTSEECCCCBT--TSSCE-EEEEETTEEEEEEEEEEC
T ss_pred CEEEEecCCCCcccCCcc----cccCCCCCcccCcccCCCceEEeeCCC--CCceE-EEEEeCCCCCcCCcccCC
Confidence 348999999999877763 466566654445554322222333332 23332 479999999999966644
No 13
>3hcj_A MSRB, peptide methionine sulfoxide reductase; methionine sulfoxide reductase B, oxidized form, oxidoreductase; 1.66A {Xanthomonas campestris PV} PDB: 3hci_A*
Probab=88.68 E-value=0.058 Score=39.44 Aligned_cols=66 Identities=21% Similarity=0.425 Sum_probs=39.1
Q ss_pred CeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033956 9 RLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYE 81 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 81 (107)
-+|.|+.|.++|=++++ -|....|=--.++.+..-.+...+|.. -|+. =..|.|..|+..||=-..
T Consensus 49 G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 114 (154)
T 3hcj_A 49 GVYTCRLCGLPLFRSNA----KFDSGTGWPSFFAPYDPAHVREIRDTS--YGMI-RTEIVCARCDSHLGHVFP 114 (154)
T ss_dssp EEEEETTTCCEEEEECT----TCCCCTTSSTTEEESCGGGEEEECCTT--TTTS-CEEEEETTTCCEEEEEES
T ss_pred EEEEccCCCCccccCcc----cccCCCCCcccccccCccceEEeecCC--CCce-EEEEEeCCCCCccCCccC
Confidence 48999999999977664 355445543334433211111122221 1333 257999999999996554
No 14
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=88.44 E-value=0.17 Score=40.56 Aligned_cols=68 Identities=12% Similarity=0.139 Sum_probs=42.3
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYER 82 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
+-+|.|+.|.++|=++++ -|....|=--.++.+-.-.+...+|+++ |+. =..|.|..|+..||=-...
T Consensus 207 ~G~Y~c~~cg~pLF~S~~----KfdSg~GWPSF~~~i~~~~v~~~~D~s~--gm~-RtEv~c~~c~~HLGHVF~D 274 (313)
T 3e0m_A 207 EGIYVDITTGEPLFFAKD----KFASGCGWPSFSRPLSKELIHYYKDLSH--GME-RIEVRSRSGSAHLGHVFTD 274 (313)
T ss_dssp SEEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSGGGEEEEEECCT--TCC-EEEEEESSSCCEEEEEESC
T ss_pred CeEEEecCCCccccCCCc----cccCCCCCcccCcccCCCceEEeecCCC--CcE-EEEEECCCCCCccCcccCC
Confidence 348999999999877653 4665566544444442212222233321 443 3589999999999966543
No 15
>2l1u_A MSRB2, methionine-R-sulfoxide reductase B2, mitochondria; methionine sulfoxide reductase, oxidoreductase; NMR {Mus musculus}
Probab=86.28 E-value=0.21 Score=36.07 Aligned_cols=68 Identities=15% Similarity=0.314 Sum_probs=39.9
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCceEEEeeccc-------ccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNGRAFLFSHAM-------NVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~~v~-------Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
.-+|.|+.|.++|=++++ -|....|=.-.++.+. .-.+...+|+ .-|+. =..|.|..|+..||=-.
T Consensus 35 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~~~~~~~~V~~~~D~--s~gm~-RtEV~C~~Cg~HLGHVF 107 (143)
T 2l1u_A 35 TGMYHCVCCDSPLFSSEK----KYCSGTGWPSFSEAYGSKGSDESHTGILRRLDT--SLGCP-RMEVVCKQCEAHLGHVF 107 (143)
T ss_dssp CEEEEESSSSCEEEEGGG----BCTTTTCCSBBSSCCSCCTTHHHHTCEEEEEEC--TTSSC-EEEEEESSSCCCCEEEE
T ss_pred CeEEEeCCCCCeeecCcc----cccCCCCChhhchhhccccccCCCCceEEeecc--cCCce-EEEEEECCCCCcCCccc
Confidence 347999999999877754 3554455433333331 0011112222 12333 34799999999999666
Q ss_pred Ee
Q 033956 81 ER 82 (107)
Q Consensus 81 ~~ 82 (107)
..
T Consensus 108 ~D 109 (143)
T 2l1u_A 108 PD 109 (143)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 16
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=65.83 E-value=0.71 Score=25.02 Aligned_cols=23 Identities=17% Similarity=0.398 Sum_probs=18.7
Q ss_pred ecCCCeEEeecCcCCCCCCCCee
Q 033956 5 LVGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~li 27 (107)
|.|.++|.|..|..-++..+.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~ 25 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLE 25 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHcc
Confidence 56889999999998887766654
No 17
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=62.83 E-value=1.5 Score=35.93 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=42.7
Q ss_pred eecCCCeEEeecCcCCCCCCCCeee--eeecCCCceEEEeecccccccCCc-cceeeceecEEEeeeecccCCCceeeEE
Q 033956 4 ELVGPRLYSCHNCRNHVALHDDIIS--KAFQGRNGRAFLFSHAMNVVVGPK-EDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 4 ~l~g~~~y~C~~C~thLa~~~~liS--k~F~G~~G~AyLf~~v~Nv~~g~~-~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
|........|.+|.+.++..+||-. .+-+=.-.++ |.....+. .+. ..+ ..-+......|.|. |+..+|-.+
T Consensus 580 ~~~~~~~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~-~~~~~~~~~~~~c~-~~~~~g~~~ 654 (699)
T 4gl2_A 580 NNPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPE--FKELYIVR-ENKTLQK-KCADYQINGEIICK-CGQAWGTMM 654 (699)
T ss_dssp --CCSEEEEESSSCCEEEEGGGCEEETTTEEECCCHH--HHHHCEEC-----------------CEEECS-SSCEEEEEC
T ss_pred cCcceeEEECCCCCcEEEehhheeeeccCceEeeCcc--hhhheeec-CCCccch-hhhccccCCcEEee-cCchhhHHe
Confidence 3344445789999999999998743 1111001111 12333332 222 122 24566778889999 999999665
Q ss_pred EeecccccccccceEEEEec
Q 033956 81 ERAFEASQKYKEGKFIFEKS 100 (107)
Q Consensus 81 ~~A~e~sqkYKEGkfILE~~ 100 (107)
..---+==-.|.=.|++|..
T Consensus 655 ~~~~~~~p~~~~~~~~~~~~ 674 (699)
T 4gl2_A 655 VHKGLDLPCLKIRNFVVVFK 674 (699)
T ss_dssp CCC---CEEECGGGEEEEET
T ss_pred eEcccccceeEEEEEEEEcC
Confidence 33222222344555666653
No 18
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=56.84 E-value=1.8 Score=21.06 Aligned_cols=21 Identities=19% Similarity=0.493 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-+...+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~l 23 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTTKANC 23 (35)
T ss_dssp SCCSCEECSSSCCEESSHHHH
T ss_pred CCCcCeeCCCCCcccCCHHHH
Confidence 356889999998877665544
No 19
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=60.99 E-value=2.4 Score=19.21 Aligned_cols=19 Identities=16% Similarity=0.581 Sum_probs=14.4
Q ss_pred CeEEeecCcCCCCCCCCee
Q 033956 9 RLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|..-.+..+.|.
T Consensus 1 kp~~C~~C~k~f~~~~~l~ 19 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLA 19 (26)
Confidence 4689999998777766654
No 20
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.43 E-value=2 Score=21.58 Aligned_cols=21 Identities=19% Similarity=0.479 Sum_probs=15.2
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-++..+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~L 25 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSITKNCL 25 (37)
T ss_dssp SSSCEEECSSSSCEEECHHHH
T ss_pred CCCcCeECCCCCcccCCHHHH
Confidence 567899999998766554443
No 21
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=53.39 E-value=2.1 Score=20.70 Aligned_cols=21 Identities=19% Similarity=0.370 Sum_probs=15.4
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRL 23 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCcchhCCHHHH
Confidence 356789999998776665544
No 22
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.22 E-value=3.4 Score=20.36 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=15.5
Q ss_pred cCCCeEEeecCcCCCCCC-CCe
Q 033956 6 VGPRLYSCHNCRNHVALH-DDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~-~~l 26 (107)
.+.++|.|..|..-+... +.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L 26 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDL 26 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHH
T ss_pred CCCCCeECCCCChhhccCHHHH
Confidence 456889999998777665 444
No 23
>1x6m_A GFA, glutathione-dependent formaldehyde-activating ENZ; Zn-enzyme, 3_10 helix, lyase; 2.35A {Paracoccus denitrificans} SCOP: b.88.1.4 PDB: 1xa8_A*
Probab=51.23 E-value=19 Score=25.84 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=21.9
Q ss_pred ccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033956 46 NVVVGPKEDRHLLTGLHTVADIYCSDCREVLGWKYER 82 (107)
Q Consensus 46 Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 82 (107)
.+..|+..-+...+|. .+.--||..|++.|-|..+.
T Consensus 79 ~~~~G~~~l~~y~ss~-~~~r~FC~~CGs~l~~~~~~ 114 (196)
T 1x6m_A 79 EVLEGAEKLEIVNAEA-PIQRHRCRDCGVHMYGRIEN 114 (196)
T ss_dssp EEEECGGGEEESCTTS-SEEEEEETTTCCEEEEEECC
T ss_pred EEecCCCceEEEeCCC-CeeeEECCCCCCcCCccccc
Confidence 3334554333333333 36677999999999877643
No 24
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=51.03 E-value=7.9 Score=31.56 Aligned_cols=86 Identities=17% Similarity=0.334 Sum_probs=50.2
Q ss_pred eEEeecCcCCCCCCCCe--eeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEeecc
Q 033956 10 LYSCHNCRNHVALHDDI--ISKAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCS--DCREVLGWKYERAFE 85 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l--iSk~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~A~e 85 (107)
...|.+|..+++..++| +..+.+=.-.+| |.+-+.+..- +..+. .-.......|+|. .|+..+|-.+..-.-
T Consensus 578 ~~~c~~c~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~~ 653 (696)
T 2ykg_A 578 KLLCRKCKALACYTADVRVIEDCHYTVLGDA--FKECFVSRPH-PKPKQ-FSSFEKRAKIFCARQNCSHDWGIHVKYKTF 653 (696)
T ss_dssp EEEESSSCCEEEEGGGEEEETTTEEEECSTT--GGGTEEEEEE-EEEEE-CSSCEEEEEEEESSTTTCCEEEEEEEETTE
T ss_pred hhhccCCCceeeecchhhhhcCCCeeecCHH--hHhHeeeccC-Ccccc-ccccccCCceEeCCCCCCccccceEEEcce
Confidence 47899999999999885 322222112222 1111222211 11222 2345566788999 999999988744333
Q ss_pred cccccccceEEEEe
Q 033956 86 ASQKYKEGKFIFEK 99 (107)
Q Consensus 86 ~sqkYKEGkfILE~ 99 (107)
+==.+|...|++|.
T Consensus 654 ~lp~~~~~~~~~~~ 667 (696)
T 2ykg_A 654 EIPVIKIESFVVED 667 (696)
T ss_dssp EEEEECGGGEEEEE
T ss_pred ecceeeeeeEEEEe
Confidence 33445688888874
No 25
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.02 E-value=2.6 Score=20.70 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=14.8
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elv_A 5 SSGLLYDCHICERKFKNELDR 25 (36)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 356789999998766554443
No 26
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.78 E-value=2.5 Score=20.74 Aligned_cols=21 Identities=10% Similarity=0.395 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elq_A 5 SSGKPFKCSLCEYATRSKSNL 25 (36)
T ss_dssp CCCCSEECSSSSCEESCHHHH
T ss_pred CCCCCccCCCCCchhCCHHHH
Confidence 456889999998877665544
No 27
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.16 E-value=2 Score=21.20 Aligned_cols=21 Identities=29% Similarity=0.471 Sum_probs=15.9
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-++..+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (37)
T 2elo_A 5 SSGRSYSCPVCEKSFSEDRLI 25 (37)
T ss_dssp CCCCCCEETTTTEECSSHHHH
T ss_pred CCCCCcCCCCCCCccCCHHHH
Confidence 567889999998777665544
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=48.91 E-value=3.5 Score=18.57 Aligned_cols=19 Identities=11% Similarity=0.373 Sum_probs=13.9
Q ss_pred CeEEeecCcCCCCCCCCee
Q 033956 9 RLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|...+.....|.
T Consensus 1 k~~~C~~C~~~f~~~~~l~ 19 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLK 19 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHH
T ss_pred CCCcCCCCCcccCCHHHHH
Confidence 3688999988777766553
No 29
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=48.15 E-value=2.7 Score=23.50 Aligned_cols=26 Identities=15% Similarity=0.310 Sum_probs=17.9
Q ss_pred eeeecCCCeEEeecCcCCCCCCCCee
Q 033956 2 AAELVGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 2 ~~~l~g~~~y~C~~C~thLa~~~~li 27 (107)
+.--.|.++|.|..|..-+...+.|.
T Consensus 2 ~~~h~~~k~~~C~~C~k~f~~~~~l~ 27 (66)
T 2drp_A 2 EFTKEGEHTYRCKVCSRVYTHISNFC 27 (66)
T ss_dssp -CEEEETTEEECTTTCCEESSHHHHH
T ss_pred ccccCCCcceECCCCcchhCCHHHHH
Confidence 44446778999999987766655543
No 30
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.06 E-value=4 Score=20.95 Aligned_cols=22 Identities=14% Similarity=0.546 Sum_probs=16.8
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQRNYLV 29 (44)
T ss_dssp SCCCSEECSSSSCEESSSHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999988777666554
No 31
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.01 E-value=2.9 Score=20.36 Aligned_cols=21 Identities=19% Similarity=0.569 Sum_probs=15.0
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 5 SSGKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHH
Confidence 356789999998766654443
No 32
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=47.58 E-value=3 Score=21.13 Aligned_cols=22 Identities=18% Similarity=0.459 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 7 ~~~~~~~C~~C~k~f~~~~~l~ 28 (42)
T 2epc_A 7 GGETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999987776655543
No 33
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=47.45 E-value=2.7 Score=19.18 Aligned_cols=18 Identities=17% Similarity=0.462 Sum_probs=13.0
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-+...+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSAM 19 (27)
T ss_dssp CCEECSSSSCEESSHHHH
T ss_pred cCccCCCcChhhCCHHHH
Confidence 579999998776655443
No 34
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=47.39 E-value=2.2 Score=21.06 Aligned_cols=21 Identities=19% Similarity=0.640 Sum_probs=15.5
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-+...+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~l 27 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSDHL 27 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHHHH
T ss_pred CCCCCccCCCCCcccCcHHHH
Confidence 466889999998877665443
No 35
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=47.07 E-value=3.8 Score=18.68 Aligned_cols=18 Identities=17% Similarity=0.565 Sum_probs=13.0
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|...++..+.|
T Consensus 1 k~~~C~~C~k~f~~~~~l 18 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHL 18 (29)
T ss_dssp CCEECSSSSCEESCSHHH
T ss_pred CCccCCCCCchhCCHHHH
Confidence 468999998776665544
No 36
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.45 E-value=3.3 Score=20.26 Aligned_cols=20 Identities=10% Similarity=0.634 Sum_probs=14.7
Q ss_pred CCCeEEeecCcCCCCCCCCe
Q 033956 7 GPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~l 26 (107)
+.++|.|..|..-+.....|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp CCCCEECTTTCCEESSHHHH
T ss_pred CCCCEECCCCCceeCCHHHH
Confidence 56789999998876655443
No 37
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=51.20 E-value=4.5 Score=18.48 Aligned_cols=19 Identities=21% Similarity=0.532 Sum_probs=14.3
Q ss_pred CeEEeecCcCCCCCCCCee
Q 033956 9 RLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|...+.....|.
T Consensus 2 k~~~C~~C~k~f~~~~~l~ 20 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQ 20 (30)
Confidence 5789999988777666554
No 38
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=45.12 E-value=3.1 Score=20.92 Aligned_cols=21 Identities=24% Similarity=0.580 Sum_probs=15.6
Q ss_pred CCCeEEeecCcCCCCCCCCee
Q 033956 7 GPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~li 27 (107)
+.++|.|..|..-+...+.|.
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHH
T ss_pred CCCceECCCCCcccCCHHHHH
Confidence 567899999987776655543
No 39
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=50.38 E-value=4.7 Score=18.47 Aligned_cols=19 Identities=16% Similarity=0.422 Sum_probs=13.9
Q ss_pred CeEEeecCcCCCCCCCCee
Q 033956 9 RLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~li 27 (107)
++|.|..|..-++..+.|.
T Consensus 1 k~~~C~~C~k~f~~~~~l~ 19 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLI 19 (29)
Confidence 3688999988777666654
No 40
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.65 E-value=3.2 Score=21.05 Aligned_cols=21 Identities=19% Similarity=0.537 Sum_probs=15.8
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-++..+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L 27 (42)
T 2en2_A 7 GGEKPYKCETCGARFVQVAHL 27 (42)
T ss_dssp CSSCSEECTTTCCEESSHHHH
T ss_pred CCCCCEeCCCcChhhCCHHHH
Confidence 467889999998776665544
No 41
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.65 E-value=5.5 Score=20.60 Aligned_cols=22 Identities=18% Similarity=0.614 Sum_probs=16.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yu8_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCSSEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCcCCchhCCHHHHH
Confidence 5678899999988777666553
No 42
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.90 E-value=5.7 Score=20.46 Aligned_cols=22 Identities=18% Similarity=0.567 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCWKSQLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCCCCCCccCCHHHHH
Confidence 4678899999987777666554
No 43
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.88 E-value=3 Score=20.25 Aligned_cols=21 Identities=10% Similarity=0.281 Sum_probs=15.9
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~l 25 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSKGTL 25 (36)
T ss_dssp CCCSSCBCTTTCCBCSSHHHH
T ss_pred CCCCCeecCcCCCCcCchHHH
Confidence 456789999999877765554
No 44
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=41.61 E-value=3.6 Score=18.74 Aligned_cols=18 Identities=33% Similarity=0.796 Sum_probs=13.0
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|...++..+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQM 19 (28)
T ss_dssp CSEECSSSCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998776655443
No 45
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.37 E-value=4.5 Score=20.42 Aligned_cols=21 Identities=24% Similarity=0.738 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-+...+.|
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L 26 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQKGSL 26 (41)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCCcCCHHHH
Confidence 467889999998776665544
No 46
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.08 E-value=6 Score=20.45 Aligned_cols=22 Identities=14% Similarity=0.542 Sum_probs=17.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCcccChhhCCHHHHH
Confidence 4678899999988777766554
No 47
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=40.93 E-value=4.2 Score=20.59 Aligned_cols=22 Identities=27% Similarity=0.673 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCccCCCcChhhCCHHHHH
Confidence 4678899999987776655543
No 48
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.21 E-value=3.3 Score=20.96 Aligned_cols=22 Identities=23% Similarity=0.729 Sum_probs=16.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLV 27 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4678899999988777665543
No 49
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=39.68 E-value=4 Score=18.50 Aligned_cols=18 Identities=17% Similarity=0.445 Sum_probs=12.8
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-+.....|
T Consensus 2 k~~~C~~C~~~f~~~~~l 19 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSK 19 (30)
T ss_dssp CCEECTTTCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998766655443
No 50
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.56 E-value=5.8 Score=20.29 Aligned_cols=22 Identities=14% Similarity=0.430 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (44)
T 2eox_A 8 TDSKSYNCNECGKAFTRIFHLT 29 (44)
T ss_dssp CCCCCEEETTTTEEESSSHHHH
T ss_pred CCCCCeECcccCcccCCHHHHH
Confidence 4678899999987666655543
No 51
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.43 E-value=3.8 Score=20.83 Aligned_cols=22 Identities=18% Similarity=0.446 Sum_probs=16.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQTLK 28 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCccCCHHHHH
Confidence 4678899999988777665543
No 52
>3fac_A Putative uncharacterized protein; complete proteome, structural genomics, PSI-2, protein structure initiative; 2.50A {Rhodobacter sphaeroides 2}
Probab=39.36 E-value=20 Score=23.42 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=20.0
Q ss_pred ccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033956 48 VVGPKEDRHLLTGLHTVADIYCSDCREVLGWKY 80 (107)
Q Consensus 48 ~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 80 (107)
..|+..-+....+...+.--||..|++.|-|..
T Consensus 49 ~~g~~~l~~y~~s~~~~~r~FC~~CGs~l~~~~ 81 (118)
T 3fac_A 49 VRGAENLTLYQFGTRTAKHWFCRTCGIYTHHQR 81 (118)
T ss_dssp EECGGGEEEECCTTSCSEEEEETTTCCEEEEEC
T ss_pred cCChhHceEEecCCCCEeeEECCCCCccccCcc
Confidence 345433333332333456679999999998764
No 53
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=39.10 E-value=19 Score=24.96 Aligned_cols=32 Identities=19% Similarity=0.118 Sum_probs=26.9
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033956 30 AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 30 ~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
.=.|+||.|+.=-++.|+..|...++..-+|-
T Consensus 33 ~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 64 (138)
T 1iz6_A 33 SSPGKHGSAKARIEAVGIFDGKVRSIVKPTSA 64 (138)
T ss_dssp CCCCTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ecCCCCCceEEEEEEEECCCCCEEEEEecCCC
Confidence 34699999998889999999999887777664
No 54
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=39.05 E-value=4.6 Score=18.28 Aligned_cols=18 Identities=22% Similarity=0.519 Sum_probs=13.4
Q ss_pred eEEeecCcCCCCCCCCee
Q 033956 10 LYSCHNCRNHVALHDDII 27 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~li 27 (107)
+|.|..|..-+...+.|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLK 19 (30)
T ss_dssp CCCCSSSSCCCSCSHHHH
T ss_pred CccCCCCCCccCCHHHHH
Confidence 588999988877766553
No 55
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.86 E-value=4.9 Score=20.76 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (44)
T 2epv_A 8 SGEKPYECNECGKAFIWKSLLI 29 (44)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCchHHHH
Confidence 4678899999987776655543
No 56
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.86 E-value=4.9 Score=20.75 Aligned_cols=22 Identities=18% Similarity=0.691 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytf_A 8 TGEKPFECSECQKAFNTKSNLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCcCCCCCCcccCCHHHHH
Confidence 4678899999987776655543
No 57
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.83 E-value=7 Score=20.23 Aligned_cols=22 Identities=9% Similarity=0.434 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoy_A 8 QKEKCFKCNKCEKTFSCSKYLT 29 (46)
T ss_dssp CCSCCEECSSSCCEESSSHHHH
T ss_pred CCCCCEECcCCCCcCCCHHHHH
Confidence 4678899999987766655543
No 58
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=38.50 E-value=4.9 Score=21.59 Aligned_cols=22 Identities=14% Similarity=0.338 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|..-+.....|.
T Consensus 3 t~~kp~~C~~C~k~F~~~~~L~ 24 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp TTTSCEECTTTCCEESSHHHHH
T ss_pred CCCcCEECCCcCcccCCHHHHH
Confidence 4678999999987766655543
No 59
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.39 E-value=4.9 Score=20.76 Aligned_cols=22 Identities=18% Similarity=0.552 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yts_A 8 TGEKPYICNECGKSFIQKSHLN 29 (46)
T ss_dssp CSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCEECCCCChhhCChHHHH
Confidence 4678899999987776655543
No 60
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.38 E-value=5 Score=20.69 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRARSSLA 29 (46)
T ss_dssp CCCCCEECTTSCCEESSHHHHH
T ss_pred CCCCCeeccccCChhcCHHHHH
Confidence 4678899999987766655543
No 61
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.18 E-value=4.7 Score=20.80 Aligned_cols=22 Identities=18% Similarity=0.585 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eor_A 8 TGEKPYNCEECGKAFIHDSQLQ 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCcCccCCCCCCCcCCHHHHH
Confidence 4678899999987776655543
No 62
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.13 E-value=4.9 Score=20.47 Aligned_cols=22 Identities=18% Similarity=0.730 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eof_A 8 TGEKPYECNECQKAFNTKSNLM 29 (44)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCCCcccCCHhHHH
Confidence 4677899999987776655543
No 63
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=37.45 E-value=3.5 Score=18.98 Aligned_cols=17 Identities=24% Similarity=0.454 Sum_probs=11.9
Q ss_pred CeEEeecCcCCCCCCCC
Q 033956 9 RLYSCHNCRNHVALHDD 25 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~ 25 (107)
++|.|..|..-++..+.
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLAS 18 (27)
T ss_dssp CTEEETTTTEEESCHHH
T ss_pred cCcCCCCCCcccCCHHH
Confidence 57999999876655443
No 64
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=37.35 E-value=8 Score=22.32 Aligned_cols=12 Identities=17% Similarity=0.603 Sum_probs=8.1
Q ss_pred EEeecCcCCCCC
Q 033956 11 YSCHNCRNHVAL 22 (107)
Q Consensus 11 y~C~~C~thLa~ 22 (107)
|.|..|+.+|..
T Consensus 32 F~C~~C~~~L~~ 43 (66)
T 1nyp_A 32 FVCAKCEKPFLG 43 (66)
T ss_dssp CBCTTTCCBCSS
T ss_pred CEECCCCCCCCC
Confidence 667777777753
No 65
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.10 E-value=5.8 Score=20.59 Aligned_cols=22 Identities=32% Similarity=0.724 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytp_A 8 TGERHYECSECGKAFARKSTLI 29 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCcccCCHHHHH
Confidence 4678899999987766655543
No 66
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=36.96 E-value=8.3 Score=19.93 Aligned_cols=22 Identities=14% Similarity=0.483 Sum_probs=17.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ely_A 8 TGEKPFKCVECGKGFSRRSALN 29 (46)
T ss_dssp CCCCSBCCSSSCCCBSSTTHHH
T ss_pred CCCCCcccCccCcccCCHHHHH
Confidence 5678899999998887776654
No 67
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.87 E-value=6.9 Score=20.18 Aligned_cols=22 Identities=14% Similarity=0.472 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQRVHLT 29 (46)
T ss_dssp SSCCSEECTTTCCEESSSHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999987766665554
No 68
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.44 E-value=5.8 Score=20.57 Aligned_cols=22 Identities=18% Similarity=0.587 Sum_probs=16.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTRKSGLH 29 (46)
T ss_dssp CSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEECcccCCccCCHhHHH
Confidence 4678899999988776665554
No 69
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.35 E-value=5.6 Score=20.56 Aligned_cols=22 Identities=18% Similarity=0.607 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTDRSNLF 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999987766655543
No 70
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.29 E-value=6 Score=20.36 Aligned_cols=21 Identities=24% Similarity=0.664 Sum_probs=15.6
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQKANL 28 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 467889999998776665544
No 71
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=36.24 E-value=4.3 Score=18.61 Aligned_cols=17 Identities=24% Similarity=0.563 Sum_probs=12.1
Q ss_pred eEEeecCcCCCCCCCCe
Q 033956 10 LYSCHNCRNHVALHDDI 26 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l 26 (107)
+|.|..|.......+.|
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLL 18 (30)
T ss_dssp CSBCTTTCCBCSSSHHH
T ss_pred CcCCcccCcccCChHHH
Confidence 57898898776665544
No 72
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=36.00 E-value=23 Score=24.42 Aligned_cols=30 Identities=17% Similarity=0.098 Sum_probs=25.4
Q ss_pred cCCCceEEEeecccccccCCccceeeceec
Q 033956 32 QGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 32 ~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
.|+||.|+.=-++.|+..|...++..-+|.
T Consensus 39 pGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 68 (136)
T 2eif_A 39 PGKHGGAKARVVGIGIFEKVKKEFVAPTSS 68 (136)
T ss_dssp CCSSSCCEEEEEEEESSSCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEEcCCCCeEEEEecCCC
Confidence 699999998889999999998887766664
No 73
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.95 E-value=5.7 Score=20.62 Aligned_cols=22 Identities=27% Similarity=0.671 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em4_A 8 TGQRPYECIECGKAFKTKSSLI 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4678899999987776655543
No 74
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.92 E-value=5.8 Score=20.59 Aligned_cols=22 Identities=14% Similarity=0.484 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em2_A 8 SGEKPFKCKECGKAFRQNIHLA 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEECCcCCchhCCHHHHH
Confidence 4678899999987766655543
No 75
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.91 E-value=5.8 Score=20.51 Aligned_cols=22 Identities=18% Similarity=0.536 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTKKSQLH 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCCHHHHH
Confidence 4678899999987776655544
No 76
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.77 E-value=5.8 Score=20.43 Aligned_cols=22 Identities=23% Similarity=0.697 Sum_probs=15.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eme_A 8 SGEKPYVCDYCGKAFGLSAELV 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4678899999987666655443
No 77
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.75 E-value=5.8 Score=20.50 Aligned_cols=21 Identities=14% Similarity=0.501 Sum_probs=15.6
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2enc_A 8 SGEKPFKCEECGKGFYTNSQC 28 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCcCCCCCCCcCCChHHH
Confidence 567889999998766665554
No 78
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.75 E-value=6.1 Score=20.42 Aligned_cols=22 Identities=23% Similarity=0.598 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emi_A 8 TGERHYECSECGKAFIQKSTLS 29 (46)
T ss_dssp SSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHHH
Confidence 4678899999987766655543
No 79
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=35.36 E-value=4.7 Score=18.14 Aligned_cols=18 Identities=11% Similarity=0.493 Sum_probs=12.1
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-+.....|
T Consensus 1 ~~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CCEECTTTSCEESCHHHH
T ss_pred CCccCCCCCCccCChhHH
Confidence 368899998766554443
No 80
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=35.35 E-value=6.1 Score=20.42 Aligned_cols=21 Identities=19% Similarity=0.664 Sum_probs=15.4
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ema_A 8 TGEKRYKCNECGKVFSRNSQL 28 (46)
T ss_dssp TTSCCEECSSSCCEESSHHHH
T ss_pred CCCcCcCCCCCcchhCCHHHH
Confidence 467889999998766655544
No 81
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=35.35 E-value=4 Score=21.97 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=12.7
Q ss_pred CCCeEEeecCcCCCCCCCCee
Q 033956 7 GPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~li 27 (107)
|.++|.|..|..-+.....|.
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~ 21 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLN 21 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHH
T ss_pred CCCCccCCCCcchhCChHHHH
Confidence 457888999987777666554
No 82
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.29 E-value=6.4 Score=20.40 Aligned_cols=22 Identities=32% Similarity=0.816 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoo_A 8 SGERPYGCNECGKNFGRHSHLI 29 (46)
T ss_dssp SCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEEccccCcccCCHHHHH
Confidence 5678899999987776655543
No 83
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.28 E-value=4.9 Score=20.83 Aligned_cols=22 Identities=18% Similarity=0.673 Sum_probs=16.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enf_A 8 TGEKPYKCNECGKVFTQNSHLV 29 (46)
T ss_dssp CCCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4678899999988777766554
No 84
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.28 E-value=6 Score=20.46 Aligned_cols=22 Identities=23% Similarity=0.659 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFRRNSHLA 29 (46)
T ss_dssp TCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999987666655543
No 85
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=35.13 E-value=14 Score=20.81 Aligned_cols=19 Identities=11% Similarity=0.345 Sum_probs=11.4
Q ss_pred cCCCeEEeecCcCCCCCCC
Q 033956 6 VGPRLYSCHNCRNHVALHD 24 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~ 24 (107)
.|.++|.|..|..-++..+
T Consensus 10 ~~~k~~~C~~C~k~F~~~~ 28 (62)
T 1vd4_A 10 TNRASFKCPVCSSTFTDLE 28 (62)
T ss_dssp CSSSEEECSSSCCEEEHHH
T ss_pred CCCCCccCCCCCchhccHH
Confidence 3556777777776544333
No 86
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.93 E-value=4.4 Score=20.43 Aligned_cols=22 Identities=23% Similarity=0.629 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQKGSLI 28 (42)
T ss_dssp CSCCSBCCTTTTCCBSSHHHHH
T ss_pred CCCCCeeCCCccchhCCHHHHH
Confidence 4678899999988777655543
No 87
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.92 E-value=6.3 Score=20.35 Aligned_cols=22 Identities=18% Similarity=0.602 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emp_A 8 TGVKPYMCNECGKAFSVYSSLT 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCeECCCCCchhCCHHHHH
Confidence 4678899999987766655543
No 88
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=34.71 E-value=7.7 Score=22.57 Aligned_cols=13 Identities=15% Similarity=0.595 Sum_probs=9.2
Q ss_pred CeEEeecCcCCCC
Q 033956 9 RLYSCHNCRNHVA 21 (107)
Q Consensus 9 ~~y~C~~C~thLa 21 (107)
.-|.|..|+.+|.
T Consensus 31 ~CF~C~~C~~~L~ 43 (65)
T 2iyb_E 31 ECFLCSCCSKCLI 43 (65)
T ss_dssp TTSBCTTTCCBCT
T ss_pred CCEECCCCCCcCC
Confidence 3467888887775
No 89
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.70 E-value=6 Score=20.43 Aligned_cols=22 Identities=18% Similarity=0.569 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQKAHLA 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4678899999987766655543
No 90
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.67 E-value=12 Score=21.89 Aligned_cols=11 Identities=27% Similarity=1.035 Sum_probs=7.0
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1x61_A 34 FVCSTCRAQLR 44 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CcccccCCcCC
Confidence 56666666663
No 91
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.66 E-value=4.9 Score=20.87 Aligned_cols=22 Identities=14% Similarity=0.566 Sum_probs=16.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yth_A 8 SGEKPFQCEECGKRFTQNSHLH 29 (46)
T ss_dssp CCSSSBCCSSSCCCBSSHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHH
Confidence 4678899999988777766554
No 92
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.64 E-value=5.7 Score=20.32 Aligned_cols=21 Identities=19% Similarity=0.589 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2emb_A 8 HTRKRYECSKCQATFNLRKHL 28 (44)
T ss_dssp CCCSSEECTTTCCEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 467889999998776665544
No 93
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.63 E-value=6.1 Score=20.41 Aligned_cols=22 Identities=18% Similarity=0.528 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ene_A 8 TGEKPYKCNECGKVFRHNSYLS 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCChHHHH
Confidence 4678899999987766655543
No 94
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.58 E-value=5.9 Score=20.47 Aligned_cols=22 Identities=18% Similarity=0.602 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFTQNSHLT 29 (46)
T ss_dssp SSSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEeCCcCCCccCCHHHHH
Confidence 4678899999987776655543
No 95
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.41 E-value=6.2 Score=20.40 Aligned_cols=22 Identities=23% Similarity=0.730 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTIRSNLI 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCChhhCCHHHHH
Confidence 4678899999987766655543
No 96
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.26 E-value=6.6 Score=20.33 Aligned_cols=22 Identities=14% Similarity=0.520 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emf_A 8 TGGKHFECTECGKAFTRKSTLS 29 (46)
T ss_dssp SSSCCEECSSSCCEESCHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999987766655543
No 97
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.24 E-value=5.2 Score=20.60 Aligned_cols=22 Identities=14% Similarity=0.427 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFSEEASLK 27 (43)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCeeCChHHHH
Confidence 4567899999988877765553
No 98
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=34.08 E-value=6.5 Score=20.38 Aligned_cols=22 Identities=18% Similarity=0.516 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFSGKLRLL 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999987766655443
No 99
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.99 E-value=5.6 Score=20.64 Aligned_cols=22 Identities=18% Similarity=0.597 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em6_A 8 MGEKCYKCDVCGKEFSQSSHLQ 29 (46)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999988777665554
No 100
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.98 E-value=5.4 Score=20.64 Aligned_cols=21 Identities=14% Similarity=0.634 Sum_probs=15.1
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en1_A 8 SGEKPFKCEECGKRFTQNSQL 28 (46)
T ss_dssp CCCCSEEETTTTEEESSHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHH
Confidence 467889999997666555444
No 101
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=33.58 E-value=14 Score=26.09 Aligned_cols=29 Identities=21% Similarity=0.476 Sum_probs=25.3
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCCc
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRNG 36 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~G 36 (107)
++.|-|..|+++=+...-|+.-.|....+
T Consensus 93 p~RYfCtQCHVpQada~PlV~N~F~~~~~ 121 (130)
T 1ogy_B 93 PRRYFCTACHVPQTNAQPLVTNEFRDMLT 121 (130)
T ss_dssp STTCCGGGTCCBCBCCCCSSCBCCBCSSS
T ss_pred ccceecccccCccccCccccccccccchh
Confidence 67899999999999999999988876554
No 102
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.48 E-value=6.2 Score=20.37 Aligned_cols=22 Identities=27% Similarity=0.619 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emh_A 8 TGERPYICTVCGKAFTDRSNLI 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4678899999987776665543
No 103
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.26 E-value=5.5 Score=20.53 Aligned_cols=22 Identities=23% Similarity=0.689 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAPCLL 29 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHHHHH
T ss_pred CCCCCeECCCCCCccCchHHHH
Confidence 4678899999988777665553
No 104
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=33.07 E-value=6.8 Score=20.28 Aligned_cols=21 Identities=14% Similarity=0.675 Sum_probs=15.6
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2emj_A 8 TGEKPFECAECGKSFSISSQL 28 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCEECCCCCcccCCHHHH
Confidence 467889999998776665544
No 105
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.06 E-value=6.9 Score=20.18 Aligned_cols=22 Identities=27% Similarity=0.690 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emy_A 8 TGENPYECHECGKAFSRKYQLI 29 (46)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCcHHHHH
Confidence 4678899999987766655543
No 106
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.96 E-value=7.2 Score=19.92 Aligned_cols=22 Identities=14% Similarity=0.537 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSSKSYLL 27 (44)
T ss_dssp SSCCCEECSSSSCEESSHHHHH
T ss_pred CCCcCccCCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 107
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.53 E-value=6.8 Score=20.28 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=15.8
Q ss_pred ecCCCeEEeecCcCCCCCCCCe
Q 033956 5 LVGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~l 26 (107)
-.+.++|.|..|..-+...+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDL 28 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHH
T ss_pred CCCCCCeECcccCchhCCHHHH
Confidence 3567889999998766655444
No 108
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.32 E-value=5.8 Score=20.57 Aligned_cols=22 Identities=27% Similarity=0.631 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVLSAHLN 29 (46)
T ss_dssp SSCCSEEETTTTEEESSHHHHH
T ss_pred CCCCCeECcccChhhCCHHHHH
Confidence 4667899999987766655543
No 109
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.31 E-value=6 Score=20.43 Aligned_cols=21 Identities=19% Similarity=0.604 Sum_probs=15.5
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en6_A 8 SGEKPYGCNECGKTFSQKSIL 28 (46)
T ss_dssp CSSCCEEETTTTEEESSHHHH
T ss_pred CCCcCeECCCCCcccCchHHH
Confidence 567889999998766665544
No 110
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.29 E-value=7 Score=20.15 Aligned_cols=21 Identities=19% Similarity=0.615 Sum_probs=15.2
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2ep0_A 8 TGEKPYKCDVCHKSFRYGSSL 28 (46)
T ss_dssp TTCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCcccCcccCChHHH
Confidence 467789999998766655444
No 111
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.21 E-value=5.5 Score=20.59 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytn_A 8 TGKKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCSSCBCTTTCCBCSSHHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHHH
Confidence 4678899999988777765553
No 112
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.18 E-value=5.5 Score=20.54 Aligned_cols=22 Identities=18% Similarity=0.625 Sum_probs=16.8
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eop_A 8 TGEKPHECRECGKSFSFNSQLI 29 (46)
T ss_dssp CCCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeeCCCCCchhCCHHHHH
Confidence 5678899999988777666554
No 113
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=32.00 E-value=25 Score=24.30 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=22.8
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033956 30 AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 30 ~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
.=.|++|.|+.--++.|+..|...++..-+|.
T Consensus 33 ~KpGKgG~A~vr~k~knl~TG~~~e~tf~s~~ 64 (138)
T 3cpf_A 33 SKTGKHGHAKVHLVGIDIFTGKKYEDICPSTH 64 (138)
T ss_dssp ECC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ccCCCCccEEEEEEEEECCCCCEEEEEeCCCC
Confidence 33699999988889999999999887776654
No 114
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.93 E-value=5.1 Score=20.47 Aligned_cols=22 Identities=23% Similarity=0.661 Sum_probs=15.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eoj_A 8 TGENPYECCECGKVFSRKDQLV 29 (44)
T ss_dssp SSCCSCEETTTTEECSSHHHHH
T ss_pred CCCcCeeCCCCCCccCCHHHHH
Confidence 4678899999987666655543
No 115
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.82 E-value=7.1 Score=20.13 Aligned_cols=22 Identities=18% Similarity=0.552 Sum_probs=15.8
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eml_A 8 TGEKPYECSVCGKAFSHRQSLS 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCCCcCCccCCHHHHH
Confidence 4678899999987666555443
No 116
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.73 E-value=6.2 Score=20.45 Aligned_cols=22 Identities=23% Similarity=0.632 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSSKSYLI 29 (46)
T ss_dssp SCCCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCCcCCCccChhhCChHHHH
Confidence 4678899999988777665554
No 117
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=31.73 E-value=31 Score=23.65 Aligned_cols=31 Identities=26% Similarity=0.177 Sum_probs=26.4
Q ss_pred ecCCCceEEEeecccccccCCccceeeceec
Q 033956 31 FQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 31 F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
=.|++|.|+.=-++.|+..|...++..-+|.
T Consensus 36 KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~ 66 (136)
T 1bkb_A 36 KTGKHGSAKARIVAVGVFDGGKRTLSLPVDA 66 (136)
T ss_dssp CCSTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCCceEEEEEEEECCCCCeEEEEEcCCC
Confidence 3699999988889999999999887777664
No 118
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=31.57 E-value=7.3 Score=20.02 Aligned_cols=22 Identities=27% Similarity=0.770 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFSLKSQLI 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 5678899999987776655543
No 119
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.50 E-value=7.2 Score=20.11 Aligned_cols=22 Identities=23% Similarity=0.637 Sum_probs=15.8
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em7_A 8 TGEKPYKCEECGKGFICRRDLY 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCccCCCccchhCCHHHHH
Confidence 4678899999987666555443
No 120
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.50 E-value=7.5 Score=20.03 Aligned_cols=21 Identities=24% Similarity=0.673 Sum_probs=15.3
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHRHTHL 28 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCChHHH
Confidence 466789999998766655544
No 121
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=31.46 E-value=7.2 Score=21.15 Aligned_cols=21 Identities=10% Similarity=0.276 Sum_probs=15.4
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+...+.|
T Consensus 20 ~~~k~~~C~~C~k~f~~~~~L 40 (54)
T 1yui_A 20 QSEQPATCPICYAVIRQSRNL 40 (54)
T ss_dssp TSSCCEECTTTCCEESSHHHH
T ss_pred CCCCCccCCCCCcccCCHHHH
Confidence 456789999998776655544
No 122
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.33 E-value=22 Score=19.50 Aligned_cols=23 Identities=17% Similarity=0.368 Sum_probs=18.5
Q ss_pred cCCCeEEeecCcCCCCCCCCeee
Q 033956 6 VGPRLYSCHNCRNHVALHDDIIS 28 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~liS 28 (107)
.|.++|.|..|..-+...+.|..
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~ 36 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc
Confidence 46789999999988887777665
No 123
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.10 E-value=7.5 Score=20.12 Aligned_cols=22 Identities=18% Similarity=0.487 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CCSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCCccCCHHHHH
Confidence 4677899999987776655543
No 124
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.08 E-value=6.3 Score=20.41 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2elz_A 8 SVEKPYKCEDCGKGYNRRLNLD 29 (46)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeeCcccCchhCCHHHHH
Confidence 4678899999988777665543
No 125
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.96 E-value=7.2 Score=20.04 Aligned_cols=21 Identities=19% Similarity=0.501 Sum_probs=15.5
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQSAHL 28 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCCCCChhhCCHHHH
Confidence 467889999998776665544
No 126
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.94 E-value=4.8 Score=20.50 Aligned_cols=22 Identities=23% Similarity=0.576 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRSKSYLI 29 (44)
T ss_dssp SSSSSSCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHH
Confidence 4677899999988777665553
No 127
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.93 E-value=6 Score=20.53 Aligned_cols=22 Identities=18% Similarity=0.733 Sum_probs=16.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en9_A 8 AGKKLFKCNECKKTFTQSSSLT 29 (46)
T ss_dssp CSSCCCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 4678899999988777665543
No 128
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.82 E-value=6.4 Score=20.31 Aligned_cols=21 Identities=14% Similarity=0.629 Sum_probs=15.0
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (45)
T 2epu_A 8 TGQKPFECTHCGKSFRAKGNL 28 (45)
T ss_dssp CSCCSEEETTTTEEESSHHHH
T ss_pred CCCcCccCCCCCCccCChHHH
Confidence 456789999998766655444
No 129
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.57 E-value=8.2 Score=19.87 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yso_A 8 SREKSHQCRECGEIFFQYVSLI 29 (46)
T ss_dssp SCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCEEccccChhhCCHHHHH
Confidence 5678899999987766655543
No 130
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=30.47 E-value=9.8 Score=22.55 Aligned_cols=11 Identities=27% Similarity=0.830 Sum_probs=5.8
Q ss_pred EeecCcCCCCC
Q 033956 12 SCHNCRNHVAL 22 (107)
Q Consensus 12 ~C~~C~thLa~ 22 (107)
.|..|+.++..
T Consensus 17 ~C~~C~~~I~~ 27 (77)
T 2egq_A 17 KCAGCKNPITG 27 (77)
T ss_dssp CCSSSCCCCCC
T ss_pred cCcccCCcccC
Confidence 35555555553
No 131
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=30.35 E-value=36 Score=24.48 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=26.7
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033956 30 AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 30 ~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
.=.|+||.|+.=-++.|+..|...++..-+|-
T Consensus 57 ~KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~ 88 (167)
T 3er0_A 57 SKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTH 88 (167)
T ss_dssp ECCSSSSCCEEEEEEEESSSCCCEEEEEESSS
T ss_pred eCCCCcCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 33799999998889999999999888776653
No 132
>3izc_U 60S ribosomal protein RPL21 (L21E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_U 3o58_T 3o5h_T 3u5e_T 3u5i_T 4b6a_T
Probab=30.24 E-value=26 Score=25.42 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=24.9
Q ss_pred eeeecCCCceEEEeec-----ccccccCCc--cceeeceecEE
Q 033956 28 SKAFQGRNGRAFLFSH-----AMNVVVGPK--EDRHLLTGLHT 63 (107)
Q Consensus 28 Sk~F~G~~G~AyLf~~-----v~Nv~~g~~--~~r~m~TG~h~ 63 (107)
-+.|+|++|+.|=+.+ ++|...|.. .-|.-+.-.|+
T Consensus 54 Hk~YHGkTGrV~nvtq~AvgiiVnk~v~gkil~KrI~VriEHi 96 (160)
T 3izc_U 54 HKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHI 96 (160)
T ss_dssp CGGGTTCEEEEEEECSSSEEEEECCCSSSSCCCEEEEECTTSE
T ss_pred CcccCCCCeEEEeeCCcEEEEEEEEEECCEeeeeEEEEeHHHc
Confidence 3689999999997663 578777766 45554444453
No 133
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.13 E-value=9 Score=20.46 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=15.8
Q ss_pred cCCCeEEeec--CcCCCCCCCCe
Q 033956 6 VGPRLYSCHN--CRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~--C~thLa~~~~l 26 (107)
.|.++|.|.. |..-++..+.|
T Consensus 5 ~gekp~~C~~~~C~k~F~~~~~L 27 (38)
T 2eln_A 5 SSGILLKCPTDGCDYSTPDKYKL 27 (38)
T ss_dssp SCCCCEECSSSSCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 4678999986 98877766554
No 134
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=30.02 E-value=5 Score=18.12 Aligned_cols=18 Identities=22% Similarity=0.641 Sum_probs=12.1
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-++..+.|
T Consensus 1 k~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCCBCTTTCCBCSSHHHH
T ss_pred CCeECCCCCcccCCHHHH
Confidence 357888888776655443
No 135
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.94 E-value=8.6 Score=19.87 Aligned_cols=22 Identities=27% Similarity=0.729 Sum_probs=17.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enh_A 8 TGEKPYECDVCRKAFSHHASLT 29 (46)
T ss_dssp CCSSSCBCTTTCCBCSSSHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4678899999988777766654
No 136
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.92 E-value=13 Score=21.61 Aligned_cols=11 Identities=27% Similarity=1.093 Sum_probs=6.7
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (70)
T 2d8z_A 32 FVCTACRKQLS 42 (70)
T ss_dssp SBCSSSCCBCT
T ss_pred CccCCCCCcCC
Confidence 55666666664
No 137
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.79 E-value=6.1 Score=20.41 Aligned_cols=22 Identities=18% Similarity=0.566 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emg_A 8 TGENPFICSECGKVFTHKTNLI 29 (46)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 4677899999988777665554
No 138
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=29.59 E-value=11 Score=32.90 Aligned_cols=86 Identities=21% Similarity=0.370 Sum_probs=0.0
Q ss_pred eEEeecCcCCCCCCCCeee--eeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEee-c
Q 033956 10 LYSCHNCRNHVALHDDIIS--KAFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGLHTVADIYCS--DCREVLGWKYERA-F 84 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liS--k~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~A-~ 84 (107)
.+.|++|...++..+||-. .+-+=.-+++|- ..+++...+. .+. .-..+....|+|. .|+..+|-....- .
T Consensus 812 ~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~f~--~~~~~~~~~~-~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~~ 887 (936)
T 4a2w_A 812 NLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFK--ERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKYLTF 887 (936)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCCCCceeechhhheeecCCCeEecChhhh--hheeccCCCC-cch-hhcccCCceEEeCccccChHhhhheEeccc
Confidence 4899999999999999732 222222233332 2223322222 122 3445667889999 9999999765321 1
Q ss_pred ccccccccceEEEEe
Q 033956 85 EASQKYKEGKFIFEK 99 (107)
Q Consensus 85 e~sqkYKEGkfILE~ 99 (107)
+.==-.|.-.|++|.
T Consensus 888 ~~~p~~~~~~~~~~~ 902 (936)
T 4a2w_A 888 DNLPVIKIKSFVMES 902 (936)
T ss_dssp ---------------
T ss_pred ccCceeeeeeEEEEe
Confidence 101123444566654
No 139
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=29.58 E-value=8.1 Score=19.83 Aligned_cols=22 Identities=18% Similarity=0.609 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em9_A 8 TGEKPYNCKECGKSFRWASCLL 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCccccccCChHHHH
Confidence 4678899999987666555443
No 140
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.33 E-value=5.4 Score=20.57 Aligned_cols=22 Identities=18% Similarity=0.685 Sum_probs=16.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSVRSSLT 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4677899999987766655543
No 141
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.20 E-value=5.4 Score=20.64 Aligned_cols=22 Identities=18% Similarity=0.603 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSSCSSSCCSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4677899999988777666554
No 142
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.09 E-value=6.1 Score=20.55 Aligned_cols=22 Identities=18% Similarity=0.656 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eon_A 8 TGEKPYKCQVCGKAFRVSSHLV 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcccCCCCCCcccCcHHHHH
Confidence 4678899999988777665543
No 143
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.71 E-value=17 Score=20.26 Aligned_cols=17 Identities=12% Similarity=0.208 Sum_probs=8.4
Q ss_pred CCCeEEee-cCcCCCCCC
Q 033956 7 GPRLYSCH-NCRNHVALH 23 (107)
Q Consensus 7 g~~~y~C~-~C~thLa~~ 23 (107)
|.++|.|. .|..-+...
T Consensus 33 ~~~p~~C~~~C~k~f~~~ 50 (66)
T 2eod_A 33 PRLPVACPNQCGVGTVAR 50 (66)
T ss_dssp SSSEEECTTCCSCCEEET
T ss_pred CCcCccCCcccCcccccH
Confidence 44555665 555443333
No 144
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.68 E-value=14 Score=21.89 Aligned_cols=11 Identities=18% Similarity=0.839 Sum_probs=5.4
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (76)
T 1x68_A 36 FNCGKCSVSLV 46 (76)
T ss_dssp CBCTTTCCBCS
T ss_pred CChhhCCCcCC
Confidence 44555555543
No 145
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.56 E-value=16 Score=21.33 Aligned_cols=11 Identities=18% Similarity=0.875 Sum_probs=7.1
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (72)
T 1x4l_A 36 FNCKKCSLSLV 46 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CEeccCCCcCC
Confidence 56666666665
No 146
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=28.52 E-value=22 Score=21.28 Aligned_cols=12 Identities=25% Similarity=0.794 Sum_probs=6.3
Q ss_pred EEeecCcCCCCC
Q 033956 11 YSCHNCRNHVAL 22 (107)
Q Consensus 11 y~C~~C~thLa~ 22 (107)
|.|..|+.+|..
T Consensus 35 F~C~~C~~~L~~ 46 (81)
T 1a7i_A 35 FLCMVCRKNLDS 46 (81)
T ss_dssp EECSSSCCEECS
T ss_pred CccCCCCCCCCC
Confidence 555555555543
No 147
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.51 E-value=6.9 Score=20.19 Aligned_cols=22 Identities=23% Similarity=0.723 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRAHSNLT 29 (46)
T ss_dssp CCSCCCCCTTTTCCCSSHHHHH
T ss_pred CCCCCeECCcCChhhCCHHHHH
Confidence 4678899999988776655543
No 148
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=28.46 E-value=17 Score=23.55 Aligned_cols=27 Identities=15% Similarity=0.333 Sum_probs=18.1
Q ss_pred eEEeecCcCCCCCCCCeeeeeecCCCceEEEee
Q 033956 10 LYSCHNCRNHVALHDDIISKAFQGRNGRAFLFS 42 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk~F~G~~G~AyLf~ 42 (107)
-|.|..|+.+|+.. .|.-+.|+.|--.
T Consensus 30 CF~C~~C~~~L~~~------~f~~~~g~~yC~~ 56 (126)
T 2xqn_T 30 HFCCFDCDSILAGE------IYVMVNDKPVCKP 56 (126)
T ss_dssp GSBCTTTCCBCTTS------EEEEETTEEEEHH
T ss_pred CCCcCCCCCCCCcC------EEEeECCEEechH
Confidence 37899999988742 3444567777643
No 149
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.42 E-value=5.5 Score=20.61 Aligned_cols=22 Identities=18% Similarity=0.614 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2yti_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCChhHHH
Confidence 4667899999988777766553
No 150
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.33 E-value=6.7 Score=20.31 Aligned_cols=22 Identities=23% Similarity=0.593 Sum_probs=16.8
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoh_A 8 SGKKPYECKECRKTFIQIGHLN 29 (46)
T ss_dssp CCSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4667899999998877766554
No 151
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.29 E-value=7.3 Score=20.22 Aligned_cols=22 Identities=23% Similarity=0.469 Sum_probs=17.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eom_A 8 HGERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCCeeCChHHHH
Confidence 5678899999998877766554
No 152
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.26 E-value=7.4 Score=20.01 Aligned_cols=22 Identities=23% Similarity=0.626 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (47)
T 2epx_A 8 TGKKPYECIECGKAFIQNTSLI 29 (47)
T ss_dssp CCCCSBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCccCchhCChHHHH
Confidence 5678899999988777666554
No 153
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.21 E-value=8.7 Score=19.70 Aligned_cols=22 Identities=14% Similarity=0.445 Sum_probs=15.9
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en8_A 8 SGEKSHTCDECGKNFCYISALR 29 (46)
T ss_dssp CCCSSEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCcCcccCCHHHHH
Confidence 4678899999987666655543
No 154
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.18 E-value=19 Score=22.36 Aligned_cols=37 Identities=11% Similarity=0.354 Sum_probs=27.6
Q ss_pred CeEEeecCcCCCCCC---CCeeeeeecCCCceEEEeeccccccc
Q 033956 9 RLYSCHNCRNHVALH---DDIISKAFQGRNGRAFLFSHAMNVVV 49 (107)
Q Consensus 9 ~~y~C~~C~thLa~~---~~liSk~F~G~~G~AyLf~~v~Nv~~ 49 (107)
.+..|..|+.+|... ..|+++ +-|+||-+..-+-+-.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSR----QAKLAYPIKDGIPYML 46 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEET----TTTEEEEEETTEECCC
T ss_pred hheECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeeeC
Confidence 368899999999765 457776 3689999987654443
No 155
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.15 E-value=5.8 Score=20.43 Aligned_cols=22 Identities=18% Similarity=0.614 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoe_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCcChhhCCHHHHH
Confidence 4677899999987776655543
No 156
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=28.13 E-value=5.8 Score=20.46 Aligned_cols=22 Identities=27% Similarity=0.531 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~ 27 (45)
T 2epq_A 6 SGEKPYSCPVCGLRFKRKDRMS 27 (45)
T ss_dssp SSCCSSEETTTTEECSCHHHHH
T ss_pred CCCCCCcCCCCCcccCCHHHHH
Confidence 4567899999987766655443
No 157
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.02 E-value=7.8 Score=19.96 Aligned_cols=21 Identities=19% Similarity=0.550 Sum_probs=15.2
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYNSKFNL 28 (46)
T ss_dssp SSCCSEEETTTTEEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 467889999998766655544
No 158
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.72 E-value=14 Score=21.37 Aligned_cols=11 Identities=27% Similarity=0.939 Sum_probs=5.8
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (69)
T 2cur_A 32 FVCVTCSKKLA 42 (69)
T ss_dssp TBCTTTCCBCT
T ss_pred CEECCCCCCCC
Confidence 45555555554
No 159
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.62 E-value=19 Score=20.82 Aligned_cols=12 Identities=17% Similarity=0.733 Sum_probs=6.3
Q ss_pred EEeecCcCCCCC
Q 033956 11 YSCHNCRNHVAL 22 (107)
Q Consensus 11 y~C~~C~thLa~ 22 (107)
|.|..|+.+|..
T Consensus 34 F~C~~C~~~L~~ 45 (72)
T 1wyh_A 34 FLCSGCEQPLGS 45 (72)
T ss_dssp CBCTTTCCBTTT
T ss_pred CeECCCCCcCCC
Confidence 455555555543
No 160
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=27.38 E-value=7.7 Score=20.06 Aligned_cols=22 Identities=23% Similarity=0.674 Sum_probs=16.6
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQTTHLI 29 (46)
T ss_dssp SSSCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 4677899999988777666553
No 161
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.36 E-value=14 Score=22.11 Aligned_cols=17 Identities=12% Similarity=0.481 Sum_probs=10.4
Q ss_pred EeecCcCCCCCCCCeee
Q 033956 12 SCHNCRNHVALHDDIIS 28 (107)
Q Consensus 12 ~C~~C~thLa~~~~liS 28 (107)
.|..|+.++...+.+|+
T Consensus 17 ~C~~C~~~I~~~~~~~~ 33 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELF 33 (82)
T ss_dssp BCTTTCCBCCSSCCBCC
T ss_pred cCccCCCccccCcEEEE
Confidence 57777777765444443
No 162
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.83 E-value=7.5 Score=19.89 Aligned_cols=22 Identities=14% Similarity=0.308 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eou_A 8 AAKTTSECQECGKIFRHSSLLI 29 (44)
T ss_dssp SSSCCCCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4567899999988777665543
No 163
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=26.65 E-value=9.9 Score=22.18 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=13.0
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.++|.|..|..-+...+.|
T Consensus 28 t~ekp~~C~~C~k~F~~~~~L 48 (60)
T 4gzn_C 28 LGYRPRSCPECGKCFRDQSEV 48 (60)
T ss_dssp HTCCCEECTTTCCEESSHHHH
T ss_pred CCCcCeECCCCCCCcCCHHHH
Confidence 356677777777655554443
No 164
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.62 E-value=7.5 Score=20.10 Aligned_cols=22 Identities=18% Similarity=0.578 Sum_probs=16.5
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emz_A 8 SGERPFKCNECGKGFGRRSHLA 29 (46)
T ss_dssp SCCCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999988777665543
No 165
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.56 E-value=6.9 Score=20.11 Aligned_cols=22 Identities=18% Similarity=0.590 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFIKKSQLH 29 (46)
T ss_dssp SSCCSSCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4677899999988777666554
No 166
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=26.54 E-value=19 Score=22.31 Aligned_cols=36 Identities=19% Similarity=0.540 Sum_probs=27.0
Q ss_pred eEEeecCcCCCCCC---CCeeeeeecCCCceEEEeeccccccc
Q 033956 10 LYSCHNCRNHVALH---DDIISKAFQGRNGRAFLFSHAMNVVV 49 (107)
Q Consensus 10 ~y~C~~C~thLa~~---~~liSk~F~G~~G~AyLf~~v~Nv~~ 49 (107)
+..|..|+.+|... ..|+++ +-|.||-+..-+-+-.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICK----GDRLAFPIKDGIPMML 46 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEET----TTTEEEEEETTEECCC
T ss_pred heECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeeeC
Confidence 67899999999765 457776 3689999987654443
No 167
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.45 E-value=7.8 Score=19.97 Aligned_cols=22 Identities=14% Similarity=0.439 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCGRSRLN 29 (46)
T ss_dssp SSSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCcCCchhCCHHHHH
Confidence 4667899999988777665543
No 168
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=26.44 E-value=8.5 Score=19.80 Aligned_cols=22 Identities=14% Similarity=0.519 Sum_probs=16.3
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQASSLR 29 (46)
T ss_dssp CCCCCCCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4678899999988777655543
No 169
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=25.88 E-value=11 Score=20.01 Aligned_cols=21 Identities=19% Similarity=0.488 Sum_probs=14.6
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|.......+.|
T Consensus 25 ~~~~~~~C~~C~~~f~~~~~l 45 (57)
T 1bbo_A 25 TDVRPYHCTYCNFSFKTKGNL 45 (57)
T ss_dssp SSCCCEECSSSSCEESSHHHH
T ss_pred CCCCCccCCCCCchhcCHHHH
Confidence 356789999998766655444
No 170
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.85 E-value=11 Score=20.39 Aligned_cols=22 Identities=18% Similarity=0.410 Sum_probs=15.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLN 29 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 3567899999987666554443
No 171
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.85 E-value=12 Score=21.53 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=14.5
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.|.+.|.|..|..-+.....|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (78)
T 2d9h_A 3 SGSSGLQCEICGFTCRQKASL 23 (78)
T ss_dssp CSCCCEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHH
Confidence 356789999997766555444
No 172
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.75 E-value=6.4 Score=20.48 Aligned_cols=22 Identities=18% Similarity=0.502 Sum_probs=16.4
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytm_A 8 TGEKPYKCMECGKAFGDNSSCT 29 (46)
T ss_dssp SSCCSSSBTTTTBCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4677899999988777665553
No 173
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q
Probab=25.29 E-value=18 Score=24.96 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=22.9
Q ss_pred eeecCCCceEEEeec-----ccccccCCc--cceeeceecE
Q 033956 29 KAFQGRNGRAFLFSH-----AMNVVVGPK--EDRHLLTGLH 62 (107)
Q Consensus 29 k~F~G~~G~AyLf~~-----v~Nv~~g~~--~~r~m~TG~h 62 (107)
|.|+|++|+.|=... ++|...+.. +.|.-+.-.|
T Consensus 54 k~YHGKTGrV~nvt~~AvgivVnkqv~gKil~KrInVriEH 94 (116)
T 3jyw_Q 54 KFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEH 94 (116)
T ss_dssp STTSSCCCBCCCCCSSSSSEEEECCCSSSSCCCEEEECGGG
T ss_pred cccCCCCeEEEeecCcEEEEEEEEEECCeeeeeEEEECHhH
Confidence 689999999886663 577777665 4454444344
No 174
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=25.19 E-value=7.5 Score=18.86 Aligned_cols=18 Identities=17% Similarity=0.565 Sum_probs=12.5
Q ss_pred CeEEeecCcCCCCCCCCe
Q 033956 9 RLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~l 26 (107)
++|.|..|..-++..+.|
T Consensus 1 kp~~C~~C~k~F~~~~~L 18 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHL 18 (33)
T ss_dssp CCCCCSSSCCCCSSHHHH
T ss_pred CcccCCCCCchhCCHHHH
Confidence 368898898776665544
No 175
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=24.96 E-value=46 Score=23.99 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=26.4
Q ss_pred ecCCCceEEEeecccccccCCccceeeceec
Q 033956 31 FQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 31 F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
=.|++|.|+.=-++.|+..|...++..-+|-
T Consensus 56 KpGKhG~A~vr~k~knl~TGk~~E~tf~s~~ 86 (167)
T 3hks_A 56 KTGKHGHAKCHFVAIDIFTAKKLEDIVPSSH 86 (167)
T ss_dssp CSSTTCCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 3699999999999999999999887777664
No 176
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.64 E-value=34 Score=17.76 Aligned_cols=22 Identities=14% Similarity=0.409 Sum_probs=16.5
Q ss_pred cCCCeEEee--cCcCCCCCCCCee
Q 033956 6 VGPRLYSCH--NCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~--~C~thLa~~~~li 27 (107)
.|.++|.|. .|..-++..+.|.
T Consensus 14 ~~~k~~~C~~~~C~k~F~~~~~L~ 37 (47)
T 1ncs_A 14 MPDKTFECLFPGCTKTFKRRYNIR 37 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSHH
T ss_pred CCCCCeECCCCCCCCccCCHHHHH
Confidence 467899995 7988777766654
No 177
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.61 E-value=6.4 Score=20.26 Aligned_cols=22 Identities=18% Similarity=0.619 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytr_A 8 TGEKPYKCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSCCTTCCTTTCCCCSSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4677899999988776655543
No 178
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.44 E-value=9.4 Score=19.56 Aligned_cols=22 Identities=18% Similarity=0.610 Sum_probs=16.2
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTWKSRLR 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCccCCccChhhCCHHHHH
Confidence 4567899999988777665543
No 179
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.13 E-value=8.4 Score=19.84 Aligned_cols=22 Identities=18% Similarity=0.510 Sum_probs=16.1
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2epz_A 8 TGEKPFDCIDCGKAFSDHIGLN 29 (46)
T ss_dssp CCCCSBCCTTTCCCBSSHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHH
Confidence 4667899999987776655543
No 180
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=23.71 E-value=14 Score=18.20 Aligned_cols=21 Identities=14% Similarity=0.319 Sum_probs=14.9
Q ss_pred cCCCeEEee--cCcCCCCCCCCe
Q 033956 6 VGPRLYSCH--NCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~--~C~thLa~~~~l 26 (107)
.|.++|.|. .|..-++..+.|
T Consensus 4 ~~~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp SSCCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 467889998 598766655443
No 181
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.66 E-value=7.6 Score=20.09 Aligned_cols=22 Identities=18% Similarity=0.480 Sum_probs=16.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytt_A 8 EGEKPYQCSECGKSFSGSYRLT 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHHH
Confidence 5677899999998777766554
No 182
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.45 E-value=14 Score=18.05 Aligned_cols=21 Identities=14% Similarity=0.496 Sum_probs=14.5
Q ss_pred cCCCeEEee--cCcCCCCCCCCe
Q 033956 6 VGPRLYSCH--NCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~--~C~thLa~~~~l 26 (107)
.|.+.|.|. .|..-++..+.|
T Consensus 2 ~~~k~~~C~~~~C~k~f~~~~~L 24 (38)
T 1bhi_A 2 SDDKPFLCTAPGCGQRFTNEDHL 24 (38)
T ss_dssp TTCCCEECCCTTTCCEESSHHHH
T ss_pred CCCcceECCCCCCCcccCCHHHH
Confidence 356889999 598766655444
No 183
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=23.14 E-value=8.4 Score=24.52 Aligned_cols=18 Identities=33% Similarity=0.721 Sum_probs=15.0
Q ss_pred eeeecccCCCceeeEEEe
Q 033956 65 ADIYCSDCREVLGWKYER 82 (107)
Q Consensus 65 ~DI~C~~C~~~lGWkY~~ 82 (107)
=+|.|-+|+..+|=+|++
T Consensus 3 iPVRCFTCGkvi~~~we~ 20 (70)
T 1twf_J 3 VPVRCFSCGKVVGDKWES 20 (70)
T ss_dssp CCSBCTTTCCBCTTCHHH
T ss_pred CCeecCCCCCChHHHHHH
Confidence 468999999999987754
No 184
>4a17_P RPL21, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_P 4a1c_P 4a1e_P
Probab=23.13 E-value=27 Score=25.26 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=24.3
Q ss_pred eeeecCCCceEEEeec-----ccccccCCc--cceeeceecEE
Q 033956 28 SKAFQGRNGRAFLFSH-----AMNVVVGPK--EDRHLLTGLHT 63 (107)
Q Consensus 28 Sk~F~G~~G~AyLf~~-----v~Nv~~g~~--~~r~m~TG~h~ 63 (107)
-+.|+|++|+.|=+.+ ++|...|.. .-|.-+.-.|+
T Consensus 54 Hk~YHGkTGrV~nvtq~AvgiiVnk~v~gkil~KrI~VriEHi 96 (157)
T 4a17_P 54 YKLYHGRTGKVFNVNPRSIGVIVHRIVNGRYIEKRLHVKIEHV 96 (157)
T ss_dssp CGGGTTEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEGGGE
T ss_pred CccccCCcccEeeecCeEEEEEEEEeECCEeeeeEEEEeHHHc
Confidence 3689999999996553 567777766 44554444453
No 185
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=22.85 E-value=20 Score=20.99 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=17.0
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.|.+.|.|..|...+.....|.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~ 24 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLN 24 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCCCCCccCChHHHH
Confidence 4667899999988887776654
No 186
>1x6o_A Eukaryotic initiation factor 5A; SGPP, structural genomics, PSI; 1.60A {Leishmania braziliensis} SCOP: b.34.5.2 b.40.4.5 PDB: 1xtd_A
Probab=22.57 E-value=43 Score=24.26 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=22.8
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033956 30 AFQGRNGRAFLFSHAMNVVVGPKEDRHLLTGL 61 (107)
Q Consensus 30 ~F~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 61 (107)
.=.|++|.|+.--++.|+..|...++..-+|-
T Consensus 57 ~KpGKgG~A~vr~k~kni~TG~k~E~tf~s~~ 88 (174)
T 1x6o_A 57 SKTGKHGHAKVSIVATDIFTGNRLEDQAPSTH 88 (174)
T ss_dssp CCC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCCCceEEEEEEEECCCCCEEEEEeCCCC
Confidence 34699999998889999999999887776663
No 187
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.56 E-value=14 Score=20.74 Aligned_cols=21 Identities=10% Similarity=0.275 Sum_probs=14.8
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.+.|.|..|..-++....|
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L 25 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAAL 25 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCeECCCCCcccCCHHHH
Confidence 356789999998766655544
No 188
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=22.39 E-value=6.6 Score=27.27 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=21.9
Q ss_pred eeecCCCeEEeecCcCCCCCCCCeee
Q 033956 3 AELVGPRLYSCHNCRNHVALHDDIIS 28 (107)
Q Consensus 3 ~~l~g~~~y~C~~C~thLa~~~~liS 28 (107)
+++.|.+.|.|..|...+++.+.|.+
T Consensus 43 ed~tGekpfyC~~C~K~F~~~~~L~~ 68 (124)
T 1zr9_A 43 PDLPGGGLHRCLACARYFIDSTNLKT 68 (124)
T ss_dssp SSSGGGGCSEETTTTEECSSHHHHHH
T ss_pred ccCCCCcceEcccCcchhCCHHHHHH
Confidence 45678889999999999999888764
No 189
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=22.34 E-value=13 Score=24.65 Aligned_cols=23 Identities=17% Similarity=0.385 Sum_probs=18.9
Q ss_pred ecCCCeEEeecCcCCCCCCCCee
Q 033956 5 LVGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 5 l~g~~~y~C~~C~thLa~~~~li 27 (107)
.+|.++|.|..|..-++....|.
T Consensus 17 h~Gek~y~C~~C~k~F~~~~~L~ 39 (133)
T 2lt7_A 17 VDGRVYYICIVCKRSYVCLTSLR 39 (133)
T ss_dssp ETTEEEEEETTTCCEESCHHHHH
T ss_pred cCCCcCeECCCCCCCcCCHHHHH
Confidence 47888899999998888777766
No 190
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.26 E-value=32 Score=20.34 Aligned_cols=12 Identities=17% Similarity=0.692 Sum_probs=6.5
Q ss_pred EEeecCcCCCCC
Q 033956 11 YSCHNCRNHVAL 22 (107)
Q Consensus 11 y~C~~C~thLa~ 22 (107)
|.|..|+.+|..
T Consensus 42 F~C~~C~~~L~~ 53 (80)
T 1x3h_A 42 FVCGDCFTSFST 53 (80)
T ss_dssp CBCSSSCCBSCS
T ss_pred CChhhCCCCCCC
Confidence 555555555543
No 191
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=22.05 E-value=54 Score=20.25 Aligned_cols=36 Identities=25% Similarity=0.588 Sum_probs=26.6
Q ss_pred eEEeecCcCCCCCC---CCeeeeeecCCCceEEEeeccccccc
Q 033956 10 LYSCHNCRNHVALH---DDIISKAFQGRNGRAFLFSHAMNVVV 49 (107)
Q Consensus 10 ~y~C~~C~thLa~~---~~liSk~F~G~~G~AyLf~~v~Nv~~ 49 (107)
+..|..|+.+|... ..|+++ .-|.||-+..-+-+-.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (69)
T 2pk7_A 8 ILACPICKGPLKLSADKTELISK----GAGLAYPIRDGIPVML 46 (69)
T ss_dssp TCCCTTTCCCCEECTTSSEEEET----TTTEEEEEETTEECCC
T ss_pred heeCCCCCCcCeEeCCCCEEEcC----CCCcEecCcCCeeeeC
Confidence 57899999999854 457776 3789999887554443
No 192
>1jni_A NAPB;, diheme cytochrome C NAPB; dihaem cytochrome C, proteolytic fragment, nitrate reductase subunit, oxidoreductase; HET: HEM; 1.25A {Haemophilus influenzae} SCOP: a.138.1.3
Probab=21.87 E-value=19 Score=25.10 Aligned_cols=28 Identities=32% Similarity=0.584 Sum_probs=10.9
Q ss_pred CCeEEeecCcCCCCCCCCeeeeeecCCC
Q 033956 8 PRLYSCHNCRNHVALHDDIISKAFQGRN 35 (107)
Q Consensus 8 ~~~y~C~~C~thLa~~~~liSk~F~G~~ 35 (107)
++.|.|..|+++=+...-|+.-.|....
T Consensus 92 p~Ry~CtqCHVPQ~~~~PlV~N~F~~~~ 119 (123)
T 1jni_A 92 PRRYFCLQCHVSQANVDPIVPNDFKPMK 119 (123)
T ss_dssp CCSCCGGGTCCC----------------
T ss_pred ccceecccccCCcccccccccCccccch
Confidence 5779999999999999999988887654
No 193
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=21.79 E-value=29 Score=20.41 Aligned_cols=25 Identities=12% Similarity=0.466 Sum_probs=16.0
Q ss_pred eEEeecCcCCCCCCCCeeeeeecCCCceEEE
Q 033956 10 LYSCHNCRNHVALHDDIISKAFQGRNGRAFL 40 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~liSk~F~G~~G~AyL 40 (107)
-|.|..|+.+|.... |..+.|+.|-
T Consensus 27 CF~C~~C~~~L~~~~------~~~~~g~~yC 51 (76)
T 1iml_A 27 CLKCEKCGKTLTSGG------HAEHEGKPYC 51 (76)
T ss_dssp TCBCTTTCCBCCTTT------EEEETTEEEE
T ss_pred CCCccccCccCCCCc------eECcCCeEee
Confidence 378888888887653 3334556554
No 194
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.73 E-value=19 Score=21.13 Aligned_cols=16 Identities=25% Similarity=0.762 Sum_probs=8.5
Q ss_pred EeecCcCCCCCCCCee
Q 033956 12 SCHNCRNHVALHDDII 27 (107)
Q Consensus 12 ~C~~C~thLa~~~~li 27 (107)
.|..|+.++...+.++
T Consensus 13 ~C~~C~~~I~~~~~~~ 28 (77)
T 1g47_A 13 TCERCKGGFAPAEKIV 28 (77)
T ss_dssp BCSSSCCBCCSTTTCE
T ss_pred CchhcCCccCCCceEE
Confidence 4666666665444443
No 195
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=21.73 E-value=14 Score=17.12 Aligned_cols=18 Identities=33% Similarity=0.796 Sum_probs=13.2
Q ss_pred CeEEee--cCcCCCCCCCCe
Q 033956 9 RLYSCH--NCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~--~C~thLa~~~~l 26 (107)
++|.|. .|..-++..+.|
T Consensus 2 k~~~C~~~~C~k~f~~~~~L 21 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDL 21 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHH
T ss_pred CCCcCcCCCCCCccCCHHHH
Confidence 568898 898777766554
No 196
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.56 E-value=15 Score=21.09 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=15.7
Q ss_pred cCCCeEEeecCcCCCCCCCCee
Q 033956 6 VGPRLYSCHNCRNHVALHDDII 27 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~li 27 (107)
.+.++|.|..|..-+.....|.
T Consensus 11 ~~~k~~~C~~C~k~f~~~~~L~ 32 (77)
T 2ct1_A 11 SGEKPYECYICHARFTQSGTMK 32 (77)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCcCchhCCHHHHH
Confidence 4667899999987666655543
No 197
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.51 E-value=21 Score=21.10 Aligned_cols=11 Identities=18% Similarity=0.803 Sum_probs=6.1
Q ss_pred EEeecCcCCCC
Q 033956 11 YSCHNCRNHVA 21 (107)
Q Consensus 11 y~C~~C~thLa 21 (107)
|.|..|+.+|.
T Consensus 37 F~C~~C~~~L~ 47 (76)
T 2cu8_A 37 LKCERCSKTLT 47 (76)
T ss_dssp CBCSSSCCBCC
T ss_pred CCCCCCCCccC
Confidence 45555555554
No 198
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=21.50 E-value=13 Score=19.23 Aligned_cols=14 Identities=36% Similarity=1.329 Sum_probs=10.6
Q ss_pred eeeecccCCCc--eee
Q 033956 65 ADIYCSDCREV--LGW 78 (107)
Q Consensus 65 ~DI~C~~C~~~--lGW 78 (107)
.|.+|..|..+ +||
T Consensus 4 vdffcetcskpwlvgw 19 (26)
T 1loi_A 4 VDFFCETCSKPWLVGW 19 (26)
T ss_dssp HHHHHHTSSCTTGGGG
T ss_pred HHHHHHhcCCchhhhh
Confidence 47789999875 566
No 199
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.50 E-value=30 Score=20.49 Aligned_cols=12 Identities=25% Similarity=0.420 Sum_probs=8.0
Q ss_pred EEeecCcCCCCC
Q 033956 11 YSCHNCRNHVAL 22 (107)
Q Consensus 11 y~C~~C~thLa~ 22 (107)
|.|..|+.+|+.
T Consensus 32 F~C~~C~~~L~~ 43 (73)
T 1wig_A 32 ALCVRCGQMFAE 43 (73)
T ss_dssp SCCSSSCCCCCS
T ss_pred CEeCCCCCCCCC
Confidence 667777777653
No 200
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=21.32 E-value=9.6 Score=16.87 Aligned_cols=17 Identities=18% Similarity=0.542 Sum_probs=10.7
Q ss_pred eEEeecCcCCCCCCCCe
Q 033956 10 LYSCHNCRNHVALHDDI 26 (107)
Q Consensus 10 ~y~C~~C~thLa~~~~l 26 (107)
+|.|..|..-+...+.|
T Consensus 1 ~~~C~~C~k~f~~~~~l 17 (27)
T 1znf_A 1 XYKCGLCERSFVEKSAL 17 (27)
T ss_dssp -CBCSSSCCBCSSHHHH
T ss_pred CccCCCCCCcCCCHHHH
Confidence 36788888766655443
No 201
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.30 E-value=16 Score=20.66 Aligned_cols=21 Identities=19% Similarity=0.523 Sum_probs=14.8
Q ss_pred cCCCeEEeecCcCCCCCCCCe
Q 033956 6 VGPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~l 26 (107)
.+.++|.|..|..-+.....|
T Consensus 10 ~~~k~~~C~~C~k~f~~~~~L 30 (72)
T 1x6e_A 10 SGEKPYGCVECGKAFSRSSIL 30 (72)
T ss_dssp TTCCCEECSSSCCEESSHHHH
T ss_pred CCCCCccCCCCCCccCCHHHH
Confidence 456789999998766555444
No 202
>3sjl_A Methylamine utilization protein MAUG; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 3sle_A* 3svw_A* 3sxt_A* 3l4o_A* 3pxs_A* 3pxt_A* 3pxw_A* 3l4m_A* 3sws_A* 3orv_A* 3rmz_A* 3rlm_A* 3rn0_A* 3rn1_A*
Probab=21.08 E-value=16 Score=29.37 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=16.1
Q ss_pred ecCCCeEEeecCcCCC-CCCCCe-------eeeeecCC
Q 033956 5 LVGPRLYSCHNCRNHV-ALHDDI-------ISKAFQGR 34 (107)
Q Consensus 5 l~g~~~y~C~~C~thL-a~~~~l-------iSk~F~G~ 34 (107)
|.++...+|+.|+.+- +..|.+ +|.+..|.
T Consensus 23 LS~~~~iSCaSCH~p~~g~~D~~~~~~~~~~s~G~~g~ 60 (373)
T 3sjl_A 23 LSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQ 60 (373)
T ss_dssp GSTTSCCCHHHHSBGGGTTBCCC---------------
T ss_pred cCCCCCcCchhhCCccccCCCCcccccccccccCCCCC
Confidence 6788899999999874 444433 66666663
No 203
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=20.94 E-value=33 Score=20.33 Aligned_cols=17 Identities=18% Similarity=0.474 Sum_probs=11.8
Q ss_pred CeEEeecCcCCCCCCCC
Q 033956 9 RLYSCHNCRNHVALHDD 25 (107)
Q Consensus 9 ~~y~C~~C~thLa~~~~ 25 (107)
.+|.|..|.+.+++.+.
T Consensus 2 ~iY~C~rCg~~fs~~el 18 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQL 18 (48)
T ss_dssp ---CCCCTTTTCCCCCS
T ss_pred cEEEeeccCCCccHHHH
Confidence 37999999998887665
No 204
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=20.91 E-value=13 Score=20.04 Aligned_cols=20 Identities=20% Similarity=0.492 Sum_probs=13.7
Q ss_pred CCCeEEeecCcCCCCCCCCe
Q 033956 7 GPRLYSCHNCRNHVALHDDI 26 (107)
Q Consensus 7 g~~~y~C~~C~thLa~~~~l 26 (107)
+.++|.|..|....+..+.|
T Consensus 27 ~~~~~~C~~C~~~f~~~~~l 46 (60)
T 2adr_A 27 NEKPYPCGLCNRAFTRRDLL 46 (60)
T ss_dssp SSCSEECTTTCCEESSHHHH
T ss_pred CCCCccCCCCCCccCCHHHH
Confidence 45678888888766655444
No 205
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=20.52 E-value=12 Score=16.69 Aligned_cols=18 Identities=28% Similarity=0.708 Sum_probs=11.9
Q ss_pred CeEEee--cCcCCCCCCCCe
Q 033956 9 RLYSCH--NCRNHVALHDDI 26 (107)
Q Consensus 9 ~~y~C~--~C~thLa~~~~l 26 (107)
++|.|. .|...+...+.|
T Consensus 1 k~~~C~~~~C~k~f~~~~~l 20 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKL 20 (29)
T ss_dssp CCEEECSTTTCEEESSHHHH
T ss_pred CCCCCcCCcCcCccCCHHHH
Confidence 368898 887766554443
No 206
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=20.37 E-value=16 Score=20.51 Aligned_cols=7 Identities=43% Similarity=0.918 Sum_probs=3.2
Q ss_pred CCeEEee
Q 033956 8 PRLYSCH 14 (107)
Q Consensus 8 ~~~y~C~ 14 (107)
.+.|.|.
T Consensus 17 ~~~~~C~ 23 (73)
T 1f2i_G 17 MRPYACP 23 (73)
T ss_dssp CCCEECS
T ss_pred CCccCCc
Confidence 3445553
No 207
>3j21_R 50S ribosomal protein L21E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.17 E-value=48 Score=22.05 Aligned_cols=14 Identities=29% Similarity=0.418 Sum_probs=11.9
Q ss_pred eeecCCCceEEEee
Q 033956 29 KAFQGRNGRAFLFS 42 (107)
Q Consensus 29 k~F~G~~G~AyLf~ 42 (107)
|.|+|++|+.|=..
T Consensus 56 k~yHGkTG~V~~vt 69 (97)
T 3j21_R 56 PRFHGRTGTVVGKR 69 (97)
T ss_dssp GGGTTCEEEEEEEE
T ss_pred cccCCCCeEEEeec
Confidence 68999999988665
No 208
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.16 E-value=14 Score=22.21 Aligned_cols=23 Identities=9% Similarity=0.212 Sum_probs=18.8
Q ss_pred cCCCeEEeecCcCCCCCCCCeee
Q 033956 6 VGPRLYSCHNCRNHVALHDDIIS 28 (107)
Q Consensus 6 ~g~~~y~C~~C~thLa~~~~liS 28 (107)
.+.++|.|..|..-+...+.|..
T Consensus 9 ~~ekpy~C~~CgK~F~~~s~L~~ 31 (66)
T 2epp_A 9 REAGILPCGLCGKVFTDANRLRQ 31 (66)
T ss_dssp CCCCCCCCTTTCCCCSCHHHHHH
T ss_pred CCccCcCCCCCCCccCCHHHHHh
Confidence 45688999999998888777764
Done!