BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033957
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0E1D7|FLP3_ORYSJ Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp.
japonica GN=Os02g0460200 PE=2 SV=1
Length = 122
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 92/112 (82%), Gaps = 6/112 (5%)
Query: 1 MSGVWVFKNGVVR-LENPGAEACSNSNT-----RRKVLVHVPTNEVMTSYAVLERKLSSL 54
M+GVWVFK+G+VR +ENPG+E S++ RRKVLVHVP+ EV+ SY VLER+L L
Sbjct: 1 MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGGRRKVLVHVPSGEVVASYEVLERRLREL 60
Query: 55 GWERYYDDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRD 106
GWERY DP LLQFH+RSTVHLIS+P+DF+KFK +HMYDIVVK RNVFEVRD
Sbjct: 61 GWERYLTDPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>sp|O24340|FPF1_SINAL Flowering-promoting factor 1 OS=Sinapis alba GN=FPF1 PE=2 SV=1
Length = 110
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 90/109 (82%), Gaps = 4/109 (3%)
Query: 1 MSGVWVFKNGVVRL-ENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERY 59
MSGVWVFKNGV+RL ENP ++ ++N+RRKV+V++PT EV++SY+ LE+ L SLGWERY
Sbjct: 1 MSGVWVFKNGVIRLVENPN-QSGGDTNSRRKVMVYLPTGEVISSYSTLEQILRSLGWERY 59
Query: 60 Y--DDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRD 106
+ D +LLQFHKRS++ LISLPKDF KF S++MYDIVVKN N F VRD
Sbjct: 60 FGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFHVRD 108
>sp|Q9LGE3|FLP1_ORYSJ Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp.
japonica GN=RAA1 PE=1 SV=1
Length = 109
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Query: 1 MSGVWVFKNGVVRL--ENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWER 58
MSGVWVFKNGVVRL + + + RRK LVH P+ +V++SYA LE +L++LGWER
Sbjct: 1 MSGVWVFKNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWER 60
Query: 59 YYDDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRDV 107
YY+DP L QFHKR ++ LISLP DF+ F S+HMYDIVVKNR+ F V D
Sbjct: 61 YYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVDA 109
>sp|O23624|FPF1_ARATH Flowering-promoting factor 1 OS=Arabidopsis thaliana GN=FPF1 PE=2
SV=1
Length = 110
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
Query: 1 MSGVWVFKNGVVRL-ENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERY 59
MSGVWVFKNGV+RL ENP ++ S++ RRKV+V++PT EV++SY+ LE+ L SLGWERY
Sbjct: 1 MSGVWVFKNGVIRLVENPN-QSGSDTQNRRKVMVYLPTGEVVSSYSTLEQILQSLGWERY 59
Query: 60 Y--DDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRD 106
+ D +LLQFHKRS++ LISLP+DF KF S++MYDIVVKN N F VRD
Sbjct: 60 FGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108
>sp|Q0JEF5|FLP4_ORYSJ Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp.
japonica GN=Os04g0282400 PE=2 SV=1
Length = 118
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 85/110 (77%), Gaps = 4/110 (3%)
Query: 1 MSGVWVFKNGVVRLENPGAEACSNSNTRR----KVLVHVPTNEVMTSYAVLERKLSSLGW 56
M+GVWVF++G+VR + A + KVLVHVP++EV+TSY VLER+L LGW
Sbjct: 1 MAGVWVFEDGMVRRADSEAPSRGRGVGGGGGGGKVLVHVPSSEVVTSYEVLERRLRELGW 60
Query: 57 ERYYDDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRD 106
ERY +DP LLQFH+RSTVHLIS+P+DF++ K +HMYD+VVK RNVFEVRD
Sbjct: 61 ERYLNDPCLLQFHQRSTVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110
>sp|Q8LR63|FLP2_ORYSJ Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp.
japonica GN=Os01g0933500 PE=2 SV=1
Length = 127
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 88/127 (69%), Gaps = 20/127 (15%)
Query: 1 MSGVWVFKNGVVRL-ENPGAEACSNSN-----------TRRKVLVHVPTNEVMTSYAVLE 48
MSGVWVF+NGVV+L ENP A A S RRK L+H+PT EV+TSYA LE
Sbjct: 1 MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLE 60
Query: 49 RKLSSLGWERYYDDPE--------LLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRN 100
RKL++LGWERYY +LQFHKRS+V LISLPKDF++F S+HMYDIVVKNR+
Sbjct: 61 RKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRD 120
Query: 101 VFEVRDV 107
F V DV
Sbjct: 121 AFRVIDV 127
>sp|Q9LXB5|FLP2_ARATH Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana
GN=FLP2 PE=2 SV=1
Length = 112
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 85/110 (77%), Gaps = 4/110 (3%)
Query: 1 MSGVWVFKNGVVRL-ENPGAEA--CSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWE 57
MSGVWVF NGV+RL ENP + S+ RR VLV++PT E ++SY+ LE+ L SLGWE
Sbjct: 1 MSGVWVFNNGVIRLVENPNQSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQILRSLGWE 60
Query: 58 RYYD-DPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRD 106
RY+ D +L+Q+HKRS++ LISLP+DF+KF S++MYDIVVKN N F VRD
Sbjct: 61 RYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110
>sp|Q5Q0B3|FLP1_ARATH Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana
GN=FLP1 PE=2 SV=2
Length = 124
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 88/124 (70%), Gaps = 17/124 (13%)
Query: 1 MSGVWVF-KNGVVRL-ENPGAEAC------------SNSNTRRKVLVHVPTNEVMTSYAV 46
MSGVWVF KNGV+RL ENP ++ RRK+LVH+P++EV++SY
Sbjct: 1 MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60
Query: 47 LERKLSSLGWERYY---DDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFE 103
LE+ L +LGWERYY + LLQFHKR+++ LISLP+DF+KF S+HMYDIVVKN NVF
Sbjct: 61 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 120
Query: 104 VRDV 107
VRD+
Sbjct: 121 VRDM 124
>sp|A3BNA1|FLP5_ORYSJ Flowering-promoting factor 1-like protein 5 OS=Oryza sativa subsp.
japonica GN=Os07g0671000 PE=3 SV=1
Length = 105
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 10/108 (9%)
Query: 2 SGVWVFKN-GVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYY 60
GVWVF+N GV+ LE T RK LVHV T+EV+ S LER+L +LGWERYY
Sbjct: 4 GGVWVFRNNGVMELEEQA--------TSRKALVHVATSEVIRSTEALERRLGALGWERYY 55
Query: 61 DDPELLQFHKR-STVHLISLPKDFNKFKSMHMYDIVVKNRNVFEVRDV 107
+D LQ H+R + LIS+P+DF++F+S HMYD+VVKNR+ F+V D+
Sbjct: 56 EDRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKVVDL 103
>sp|Q5HUV1|SYE1_CAMJR Glutamate--tRNA ligase 1 OS=Campylobacter jejuni (strain RM1221)
GN=gltX1 PE=3 SV=1
Length = 431
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 51 LSSLGWERYYDDPELLQFHKRSTVHLISLPKDFNKF 86
L S+ W+ YY E L+FH++ + L+S K F F
Sbjct: 60 LFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACF 95
>sp|Q9PP78|SYE1_CAMJE Glutamate--tRNA ligase 1 OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=gltX1 PE=3 SV=1
Length = 431
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 51 LSSLGWERYYDDPELLQFHKRSTVHLISLPKDFNKF 86
L S+ W+ YY E L+FH++ + L+S K F F
Sbjct: 60 LFSISWQHYYIQSENLKFHRQMALKLVSEKKAFACF 95
>sp|A6ZVI6|UTP25_YEAS7 U3 small nucleolar RNA-associated protein 25 OS=Saccharomyces
cerevisiae (strain YJM789) GN=UTP25 PE=3 SV=1
Length = 721
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 6 VFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65
+ KN +NP E TR KVL+ VPT EV +Y V+++ +S G ++ +
Sbjct: 297 ILKNNQRLQDNPDTEHLDQGFTRPKVLIVVPTREV--AYRVVDKIISKSGIDQVDKKGKF 354
Query: 66 LQFHKRSTVHLISLPKDF 83
+ ++ S PK F
Sbjct: 355 YDQFRDDSLPPKSKPKSF 372
>sp|C7GKL8|UTP25_YEAS2 U3 small nucleolar RNA-associated protein 25 OS=Saccharomyces
cerevisiae (strain JAY291) GN=UTP25 PE=3 SV=1
Length = 721
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 6 VFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65
+ KN +NP E TR KVL+ VPT EV +Y V+++ +S G ++ +
Sbjct: 297 ILKNNQRLQDNPDTEHLDQGFTRPKVLIVVPTREV--AYRVVDKIISKSGIDQVDKKGKF 354
Query: 66 LQFHKRSTVHLISLPKDF 83
+ ++ S PK F
Sbjct: 355 YDQFRDDSLPPKSKPKSF 372
>sp|B3LTT8|UTP25_YEAS1 U3 small nucleolar RNA-associated protein 25 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=UTP25 PE=3 SV=1
Length = 721
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 6 VFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65
+ KN +NP E TR KVL+ VPT EV +Y V+++ +S G ++ +
Sbjct: 297 ILKNNQRLQDNPDTEHLDQGFTRPKVLIVVPTREV--AYRVVDKIISKSGIDQVDKKGKF 354
Query: 66 LQFHKRSTVHLISLPKDF 83
+ ++ S PK F
Sbjct: 355 YDQFRDDSLPPKSKPKSF 372
>sp|P40498|UTP25_YEAST U3 small nucleolar RNA-associated protein 25 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP25 PE=1
SV=1
Length = 721
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 6 VFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65
+ KN +NP E TR KVL+ VPT EV +Y V+++ +S G ++ +
Sbjct: 297 ILKNNQRLQDNPDTEHLDQGFTRPKVLIVVPTREV--AYRVVDKIISKSGIDQVDKKGKF 354
Query: 66 LQFHKRSTVHLISLPKDF 83
+ ++ S PK F
Sbjct: 355 YDQFRDDSLPPKSKPKSF 372
>sp|C8ZAF8|UTP25_YEAS8 U3 small nucleolar RNA-associated protein 25 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=UTP25 PE=3 SV=1
Length = 721
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 6 VFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65
+ KN +NP E TR KVL+ VPT EV +Y V+++ +S G ++ +
Sbjct: 297 ILKNNQRLQDNPDTEHLDQGFTRPKVLIVVPTREV--AYRVVDKIISKSGIDQVDKKGKF 354
Query: 66 LQFHKRSTVHLISLPKDF 83
+ ++ S PK F
Sbjct: 355 YDQFRDDSLPPKSKPKSF 372
>sp|A1B8C2|CTAA_PARDP Heme A synthase OS=Paracoccus denitrificans (strain Pd 1222)
GN=ctaA PE=3 SV=2
Length = 381
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 21/28 (75%)
Query: 52 SSLGWERYYDDPELLQFHKRSTVHLISL 79
++LGW ++++P L+QF R T +L+++
Sbjct: 272 ATLGWRNFFENPALVQFIHRMTGYLLAV 299
>sp|A8FLQ4|SYE1_CAMJ8 Glutamate--tRNA ligase 1 OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=gltX1 PE=3
SV=1
Length = 431
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 51 LSSLGWERYYDDPELLQFHKRSTVHLISLPKDFNKF 86
L + W+ YY E L+FH++ + LIS K F F
Sbjct: 60 LFGISWQHYYIQSENLKFHRQMALKLISEKKAFACF 95
>sp|Q00805|GIL_DROME Protein giant-lens OS=Drosophila melanogaster GN=aos PE=1 SV=2
Length = 444
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 22 CSNSNTRRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPELLQFHKRSTVHLISLPK 81
C SN +P N ++ ++ + SL + YY+ +++Q HKR L+ +
Sbjct: 164 CPESN-------RMPNNVIIHHHSHSSGSVDSLKYRNYYEREKMMQ-HKRM---LLGEFQ 212
Query: 82 DFNKFKSMHMYDIVVKNRNVFE 103
D KF+S+HM ++ K V+E
Sbjct: 213 D-KKFESLHMKKLMQKLGAVYE 233
>sp|Q8RXN5|TYW1_ARATH tRNA wybutosine-synthesizing protein 1 homolog OS=Arabidopsis
thaliana GN=TYW1 PE=2 SV=1
Length = 647
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 23 SNSNTRRKVLVHVPTNEVMTS--------YAVLERKLSSLGWERYYDDPELLQFHKRSTV 74
+N+ K+L+ P ++ S ++R L + WER+ D + LQ ++ TV
Sbjct: 428 TNAQFPEKILMMKPITQLYVSVDAATKESLKAIDRPLFADFWERFIDSLKALQEKQQRTV 487
Query: 75 HLISLPKDFN 84
+ ++L K +N
Sbjct: 488 YRLTLVKGWN 497
>sp|A1VZI8|SYE1_CAMJJ Glutamate--tRNA ligase 1 OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=gltX1 PE=3 SV=1
Length = 431
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 51 LSSLGWERYYDDPELLQFHKRSTVHLISLPKDFNKF 86
L + W+ YY E L+FH++ + L+S K F F
Sbjct: 60 LFGISWQHYYIQSENLKFHRQMALKLVSEKKAFACF 95
>sp|A7H3M3|SYE2_CAMJD Glutamate--tRNA ligase 2 OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=gltX2 PE=3
SV=1
Length = 431
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 51 LSSLGWERYYDDPELLQFHKRSTVHLISLPKDFNKF 86
L + W+ YY E L+FH++ + L+S K F F
Sbjct: 60 LFGISWQHYYIQSENLKFHRQMALKLVSEKKAFACF 95
>sp|Q9QZZ4|MYO15_MOUSE Unconventional myosin-XV OS=Mus musculus GN=Myo15a PE=1 SV=2
Length = 3511
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 61 DDPELLQFHKRSTVHLISL 79
+DPELL FHK +HL SL
Sbjct: 2862 EDPELLSFHKGDIIHLQSL 2880
>sp|Q1CTQ6|KAD_HELPH Adenylate kinase OS=Helicobacter pylori (strain HPAG1) GN=adk PE=3
SV=1
Length = 191
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 54 LGWERYYDDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEV 104
LG R DD E + FH R V L L + N +K+ H++ ++ R++ E+
Sbjct: 129 LGRSRGADDNEKV-FHNRMRVFLDPLAEIQNFYKAKHLHKVINGERSIEEI 178
>sp|Q9ZLL8|KAD_HELPJ Adenylate kinase OS=Helicobacter pylori (strain J99) GN=adk PE=3
SV=1
Length = 191
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 54 LGWERYYDDPELLQFHKRSTVHLISLPKDFNKFKSMHMYDIVVKNRNVFEV 104
LG R DD E + FH R V L L + N +K+ H++ I+ R++ E+
Sbjct: 129 LGRSRGADDNERV-FHNRMRVFLDPLVEIQNFYKAKHLHKIINGERSIEEI 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,578,623
Number of Sequences: 539616
Number of extensions: 1439714
Number of successful extensions: 3290
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3253
Number of HSP's gapped (non-prelim): 33
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)