Query 033957
Match_columns 107
No_of_seqs 54 out of 56
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 13:42:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033957.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/033957hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2as0a1 b.122.1.9 (A:1-72) Hyp 70.3 3.6 0.00026 23.9 4.4 32 3-41 18-49 (72)
2 d1edqa3 d.26.3.1 (A:444-516) C 65.7 3.2 0.00024 24.1 3.4 25 41-65 33-57 (73)
3 d1itxa2 d.26.3.1 (A:338-409) C 53.5 3.8 0.00028 23.8 2.2 25 41-65 32-57 (72)
4 d1vf8a2 d.26.3.1 (A:246-315) C 51.4 6.2 0.00045 23.0 2.9 29 35-65 29-57 (70)
5 d1tdja2 d.58.18.2 (A:336-423) 49.0 4.1 0.0003 25.4 1.9 43 28-71 41-85 (88)
6 d1jb7b_ b.40.4.3 (B:) Core dom 48.6 0.49 3.5E-05 34.9 -3.1 23 34-56 91-113 (216)
7 d1ig4a_ d.10.1.3 (A:) Methylat 48.3 12 0.00087 22.8 4.0 25 28-52 30-54 (75)
8 d1qk9a_ d.10.1.3 (A:) Methyl-C 47.7 10 0.00073 23.9 3.7 28 28-55 43-70 (92)
9 d1goia3 d.26.3.1 (A:292-379) C 43.5 7.3 0.00053 23.8 2.4 25 41-65 48-73 (88)
10 d1ccwa_ c.23.6.1 (A:) Glutamat 31.0 23 0.0017 22.6 3.5 53 27-79 2-60 (137)
11 d2go7a1 c.108.1.6 (A:3-206) Hy 31.0 5.4 0.00039 24.8 0.2 27 31-61 99-125 (204)
12 d1o6wa2 b.72.1.1 (A:30-75) Spl 30.8 35 0.0025 19.0 3.9 30 45-74 5-35 (46)
13 d1x42a1 c.108.1.1 (A:1-230) Hy 30.3 9.4 0.00068 24.2 1.4 28 31-61 116-143 (230)
14 d1nvpc_ b.56.1.1 (C:) Large ch 27.2 17 0.0012 20.9 2.0 25 3-39 18-44 (47)
15 d1sdoa_ c.52.1.21 (A:) Restric 27.1 38 0.0028 23.8 4.4 13 45-57 62-74 (203)
16 d2g9na1 c.37.1.19 (A:21-238) I 25.7 11 0.0008 25.3 1.1 25 36-60 6-36 (218)
17 d1agqa_ g.17.1.2 (A:) Glial ce 25.2 17 0.0012 22.3 1.9 22 51-74 13-35 (97)
18 d1whza_ d.50.3.2 (A:) Hypothet 24.7 26 0.0019 20.4 2.6 15 43-57 6-20 (70)
19 d1npba_ d.32.1.2 (A:) Fosfomyc 24.0 33 0.0024 20.0 3.1 16 42-57 75-90 (140)
20 d2hcfa1 c.108.1.6 (A:2-229) Hy 21.9 26 0.0019 21.8 2.4 28 31-61 109-136 (228)
21 d1xffa_ d.153.1.1 (A:) Glucosa 21.6 28 0.002 23.3 2.6 27 29-58 92-118 (238)
22 d1v5xa_ c.1.2.4 (A:) N-(5'phos 20.9 18 0.0013 24.0 1.5 49 29-89 54-103 (200)
23 d1o70a2 b.118.1.1 (A:468-624) 20.4 3.1 0.00023 26.1 -2.5 16 29-44 34-49 (157)
24 d1nh2c_ b.56.1.1 (C:) Large ch 20.2 27 0.002 20.8 2.0 25 3-39 29-55 (59)
No 1
>d2as0a1 b.122.1.9 (A:1-72) Hypothetical protein PH1915, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=70.35 E-value=3.6 Score=23.95 Aligned_cols=32 Identities=31% Similarity=0.365 Sum_probs=22.3
Q ss_pred eeEEEeCceEEeeCCCccCCCCCCCcceEEEEccCCcee
Q 033957 3 GVWVFKNGVVRLENPGAEACSNSNTRRKVLVHVPTNEVM 41 (107)
Q Consensus 3 GVWvFknGV~rlenp~~~~~~~~~~rrKvLvh~ps~Evi 41 (107)
+-|+|.+||.+++.+.+++ -=|.|+-+.|+.|
T Consensus 18 ~pwi~~~~i~~~~g~~~~G-------d~V~v~d~~g~~l 49 (72)
T d2as0a1 18 AMIVFKKGVVRVEGDIKPG-------DIVEVYTRGGKFL 49 (72)
T ss_dssp CCEEEGGGEEEEESCCCTT-------CEEEEEETTCCEE
T ss_pred CCeECHhhcccccCCcCCC-------cEEEEEeCCCcEE
Confidence 5899999999995433221 1577777888743
No 2
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens [TaxId: 615]}
Probab=65.68 E-value=3.2 Score=24.14 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=21.9
Q ss_pred eehHHHHHHHHhhccceeecCCCce
Q 033957 41 MTSYAVLERKLSSLGWERYYDDPEL 65 (107)
Q Consensus 41 i~Sy~~LE~kL~~LGWeRYy~d~~l 65 (107)
|-+|.+|.+.+..-||+++++|...
T Consensus 33 ~~~Y~~l~~~~~~~g~~~~wD~~a~ 57 (73)
T d1edqa3 33 IVDYRQIAGQFMSGEWQYTYDATAE 57 (73)
T ss_dssp EEEHHHHHHHSSSTTCEEEEETTTT
T ss_pred hhHHHHHHHHhccCCeeEEEecccc
Confidence 6789999999999999999987654
No 3
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans [TaxId: 1397]}
Probab=53.53 E-value=3.8 Score=23.81 Aligned_cols=25 Identities=24% Similarity=0.502 Sum_probs=17.7
Q ss_pred eehHHHHHHH-HhhccceeecCCCce
Q 033957 41 MTSYAVLERK-LSSLGWERYYDDPEL 65 (107)
Q Consensus 41 i~Sy~~LE~k-L~~LGWeRYy~d~~l 65 (107)
+.+|.+|... +..-||+|||++..-
T Consensus 32 ~~~Y~ei~~~~~~~~g~~~~~D~~a~ 57 (72)
T d1itxa2 32 SFDFYDLEANYINKNGYTRYWNDTAK 57 (72)
T ss_dssp EEEHHHHHHHTTTCTTEEEEEETTTT
T ss_pred cChHHHHHHHhccCCCCEEEEcCCCc
Confidence 5667776554 566799999986544
No 4
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.38 E-value=6.2 Score=22.97 Aligned_cols=29 Identities=17% Similarity=0.268 Sum_probs=19.2
Q ss_pred ccCCceeehHHHHHHHHhhccceeecCCCce
Q 033957 35 VPTNEVMTSYAVLERKLSSLGWERYYDDPEL 65 (107)
Q Consensus 35 ~ps~Evi~Sy~~LE~kL~~LGWeRYy~d~~l 65 (107)
+.+.. +-+|.++.+.|.+ ||.|.|++...
T Consensus 29 t~~~G-~l~y~EIc~~~~~-~~~~~~D~~~~ 57 (70)
T d1vf8a2 29 TDESG-LLAYYEVCTFLNE-GATEVWDAPQE 57 (70)
T ss_dssp TCCTT-EEEHHHHHHHHHT-TCEEEEETTTT
T ss_pred cCCCC-eEeHHHHHHHHhC-CCeEEEeCCCC
Confidence 34444 4467777777765 99998875543
No 5
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.01 E-value=4.1 Score=25.42 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=33.6
Q ss_pred cceEEEEccCCceeehHHHHHHHHhhccceeecC--CCceeeeeec
Q 033957 28 RRKVLVHVPTNEVMTSYAVLERKLSSLGWERYYD--DPELLQFHKR 71 (107)
Q Consensus 28 rrKvLvh~ps~Evi~Sy~~LE~kL~~LGWeRYy~--d~~l~QfHkr 71 (107)
.-+|||-+-...-....+.|.+.|.++|.+ |.+ |.++.+.|-|
T Consensus 41 ~a~VlvGi~~~~~~~e~~~l~~~L~~~Gy~-~~Dltdne~aK~HlR 85 (88)
T d1tdja2 41 NACIFVGVRLSRGLEERKEILQMLNDGGYS-VVDLSDDEMAKLHVR 85 (88)
T ss_dssp BCEEEEEEECSSTHHHHHHHHHHHTSSSCE-EETTSSCHHHHHTGG
T ss_pred CeEEEEEEEecCcchhHHHHHHHHHHCCCc-eEECcCCHHHHHHHH
Confidence 458999876654445788999999999988 555 7888888876
No 6
>d1jb7b_ b.40.4.3 (B:) Core domain of telomere end binding protein beta subunit {Oxytricha nova [TaxId: 200597]}
Probab=48.64 E-value=0.49 Score=34.90 Aligned_cols=23 Identities=43% Similarity=0.560 Sum_probs=19.0
Q ss_pred EccCCceeehHHHHHHHHhhccc
Q 033957 34 HVPTNEVMTSYAVLERKLSSLGW 56 (107)
Q Consensus 34 h~ps~Evi~Sy~~LE~kL~~LGW 56 (107)
-+.|.||.|||+-||.||.-..+
T Consensus 91 rvnsaevftsyanlearlivhsf 113 (216)
T d1jb7b_ 91 RVNSAEVFTSYANLEARLIVHSF 113 (216)
T ss_dssp ECCTTTCSSCBTTEEEEEEEEEE
T ss_pred ecchHHHhHhhhchhheeeeecc
Confidence 47899999999999999864433
No 7
>d1ig4a_ d.10.1.3 (A:) Methylation-dependent transcriptional repressor MBD1/PCM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.29 E-value=12 Score=22.84 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=22.6
Q ss_pred cceEEEEccCCceeehHHHHHHHHh
Q 033957 28 RRKVLVHVPTNEVMTSYAVLERKLS 52 (107)
Q Consensus 28 rrKvLvh~ps~Evi~Sy~~LE~kL~ 52 (107)
+.-|..+.|+|+-++|..+|++-|.
T Consensus 30 k~DvyY~sP~Gkk~RS~~ev~~yL~ 54 (75)
T d1ig4a_ 30 RSDTYYQSPTGDRIRSKVELTRYLG 54 (75)
T ss_dssp CCEEEEECSSSCEECSHHHHHHHHC
T ss_pred ceeEEEECCCCCEEeCHHHHHHHhc
Confidence 4579999999999999999999984
No 8
>d1qk9a_ d.10.1.3 (A:) Methyl-CpG-binding protein 2, MECP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.74 E-value=10 Score=23.88 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=25.2
Q ss_pred cceEEEEccCCceeehHHHHHHHHhhcc
Q 033957 28 RRKVLVHVPTNEVMTSYAVLERKLSSLG 55 (107)
Q Consensus 28 rrKvLvh~ps~Evi~Sy~~LE~kL~~LG 55 (107)
+.-|..+.|+|.-++|..++++-|.+.|
T Consensus 43 k~Dvyy~sP~Gkk~RS~~eV~~yL~~~~ 70 (92)
T d1qk9a_ 43 KYDVYLINPQGKAFRSKVELIAYFEKVG 70 (92)
T ss_dssp CCCEEEEETTTEEESSHHHHHHHHHHHT
T ss_pred eeeEEEECCCCCeeecHHHHHHHHHHCC
Confidence 5579999999999999999999998765
No 9
>d1goia3 d.26.3.1 (A:292-379) Chitinase B {Serratia marcescens [TaxId: 615]}
Probab=43.52 E-value=7.3 Score=23.78 Aligned_cols=25 Identities=28% Similarity=0.574 Sum_probs=18.9
Q ss_pred eehHHHHHH-HHhhccceeecCCCce
Q 033957 41 MTSYAVLER-KLSSLGWERYYDDPEL 65 (107)
Q Consensus 41 i~Sy~~LE~-kL~~LGWeRYy~d~~l 65 (107)
|-.|-.|+. .+..-||+|||+|..-
T Consensus 48 ~~~y~~l~~~~~~~~Gy~~~~D~~Ak 73 (88)
T d1goia3 48 IASYRQLEQMLQGNYGYQRLWNDKTK 73 (88)
T ss_dssp EEEHHHHHHHHHTTSSEEEEEETTTT
T ss_pred cccHHHHHHhhccCCCcEEEeCcCcc
Confidence 567888866 4566899999987653
No 10
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=31.00 E-value=23 Score=22.59 Aligned_cols=53 Identities=8% Similarity=0.166 Sum_probs=35.2
Q ss_pred CcceEEEEccCCcee-ehHHHHHHHHhhccceeecC--C---CceeeeeecCceeEEec
Q 033957 27 TRRKVLVHVPTNEVM-TSYAVLERKLSSLGWERYYD--D---PELLQFHKRSTVHLISL 79 (107)
Q Consensus 27 ~rrKvLvh~ps~Evi-~Sy~~LE~kL~~LGWeRYy~--d---~~l~QfHkr~sv~LISL 79 (107)
+|+|||+-++.||.= -.-..++.-|+..||+=+|- | .++++.=++...|+|-|
T Consensus 2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~iv~a~~~~~~d~v~l 60 (137)
T d1ccwa_ 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILV 60 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHHHHHHHHhcCCCEEEE
Confidence 367999999988852 23567899999999997763 1 23444444444555433
No 11
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=30.96 E-value=5.4 Score=24.78 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=18.3
Q ss_pred EEEEccCCceeehHHHHHHHHhhccceeecC
Q 033957 31 VLVHVPTNEVMTSYAVLERKLSSLGWERYYD 61 (107)
Q Consensus 31 vLvh~ps~Evi~Sy~~LE~kL~~LGWeRYy~ 61 (107)
+.+.+-||- + ...++.|..+||.+||+
T Consensus 99 ~~~~v~Sn~---~-~~~~~~l~~~gl~~~f~ 125 (204)
T d2go7a1 99 IQQFIYTHK---G-NNAFTILKDLGVESYFT 125 (204)
T ss_dssp CEEEEECSS---C-THHHHHHHHHTCGGGEE
T ss_pred cchhhhccc---c-hhhhhhhhhcccccccc
Confidence 445555663 1 23567899999999964
No 12
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.82 E-value=35 Score=19.04 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=21.9
Q ss_pred HHHHHHHhhccceeecC-CCceeeeeecCce
Q 033957 45 AVLERKLSSLGWERYYD-DPELLQFHKRSTV 74 (107)
Q Consensus 45 ~~LE~kL~~LGWeRYy~-d~~l~QfHkr~sv 74 (107)
..-|+.|.+-||.-+.. |-..+.+|.....
T Consensus 5 t~~E~~l~~~~W~e~~~~~Gr~YYyN~~T~e 35 (46)
T d1o6wa2 5 SQEELLLRENGWKAAKTADGKVYYYNPTTRE 35 (46)
T ss_dssp HHHHHHHHHHTCEEEECTTCCEEEEETTTTE
T ss_pred CHHHHHhccCCCeEEECCCCCEEEEECCCCC
Confidence 35689999999999986 4456667665443
No 13
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=30.35 E-value=9.4 Score=24.16 Aligned_cols=28 Identities=25% Similarity=0.344 Sum_probs=22.4
Q ss_pred EEEEccCCceeehHHHHHHHHhhccceeecC
Q 033957 31 VLVHVPTNEVMTSYAVLERKLSSLGWERYYD 61 (107)
Q Consensus 31 vLvh~ps~Evi~Sy~~LE~kL~~LGWeRYy~ 61 (107)
+-+.+-|| ++.+.++.+|..+|+..||+
T Consensus 116 ~~i~i~Sn---~~~~~~~~~l~~~gl~~~fd 143 (230)
T d1x42a1 116 YHVGMITD---SDTEYLMAHLDALGIKDLFD 143 (230)
T ss_dssp BEEEEEES---SCHHHHHHHHHHHTCGGGCS
T ss_pred Cceeeeec---cccccchhhhcccccccccc
Confidence 45666666 47788999999999999975
No 14
>d1nvpc_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.24 E-value=17 Score=20.93 Aligned_cols=25 Identities=24% Similarity=0.627 Sum_probs=16.9
Q ss_pred eeEEE--eCceEEeeCCCccCCCCCCCcceEEEEccCCc
Q 033957 3 GVWVF--KNGVVRLENPGAEACSNSNTRRKVLVHVPTNE 39 (107)
Q Consensus 3 GVWvF--knGV~rlenp~~~~~~~~~~rrKvLvh~ps~E 39 (107)
+-|.| |||||.+. ++-.+..-++||
T Consensus 18 nKWKc~lKdGim~in------------gkdyvF~ka~gE 44 (47)
T d1nvpc_ 18 NKWKFHLKDGIMNLN------------GRDYIFSKAIGD 44 (47)
T ss_dssp TEEEEEEEEEEEEET------------TEEEEEEEEEEE
T ss_pred ceEEEEEEeeEEEEC------------CcEEEEEeeeee
Confidence 34766 99999883 135666666666
No 15
>d1sdoa_ c.52.1.21 (A:) Restriction endonuclease BstyI {Geobacillus stearothermophilus [TaxId: 1422]}
Probab=27.07 E-value=38 Score=23.84 Aligned_cols=13 Identities=31% Similarity=0.823 Sum_probs=11.2
Q ss_pred HHHHHHHhhccce
Q 033957 45 AVLERKLSSLGWE 57 (107)
Q Consensus 45 ~~LE~kL~~LGWe 57 (107)
..|.+.|.++||+
T Consensus 62 ~~lk~~l~~~GW~ 74 (203)
T d1sdoa_ 62 EAFKEKLEAKGWK 74 (203)
T ss_dssp HHHHHHHHHTTCE
T ss_pred HHHHHHHHHCCCc
Confidence 4588999999997
No 16
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.67 E-value=11 Score=25.28 Aligned_cols=25 Identities=28% Similarity=0.428 Sum_probs=19.5
Q ss_pred cCCceeehHH------HHHHHHhhccceeec
Q 033957 36 PTNEVMTSYA------VLERKLSSLGWERYY 60 (107)
Q Consensus 36 ps~Evi~Sy~------~LE~kL~~LGWeRYy 60 (107)
+-+|.|+|++ .|-+.|.++||++=+
T Consensus 6 ~~~e~i~sF~~l~L~~~l~~~L~~~g~~~pt 36 (218)
T d2g9na1 6 NWNEIVDSFDDMNLSESLLRGIYAYGFEKPS 36 (218)
T ss_dssp CCCCCCCCGGGSCCCHHHHHHHHHHTCCSCC
T ss_pred CCCCccCCHHHCCCCHHHHHHHHHCCCCCCC
Confidence 3468899997 577888999998743
No 17
>d1agqa_ g.17.1.2 (A:) Glial cell-derived neurotrophic factor, GDNF {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.24 E-value=17 Score=22.27 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=15.6
Q ss_pred HhhccceeecCCCceeeeee-cCce
Q 033957 51 LSSLGWERYYDDPELLQFHK-RSTV 74 (107)
Q Consensus 51 L~~LGWeRYy~d~~l~QfHk-r~sv 74 (107)
..+|||. +..|..++|+- +++.
T Consensus 13 f~elGw~--~~~p~~~~~~YC~G~C 35 (97)
T d1agqa_ 13 VTDLGLG--YETKEELIFRYCSGSC 35 (97)
T ss_dssp GGGGCSS--CCCCCEEEEEEEESCC
T ss_pred HHHcCCc--eecCCeeeeeeeccCC
Confidence 5789998 46787777765 3444
No 18
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=24.69 E-value=26 Score=20.37 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.2
Q ss_pred hHHHHHHHHhhccce
Q 033957 43 SYAVLERKLSSLGWE 57 (107)
Q Consensus 43 Sy~~LE~kL~~LGWe 57 (107)
.+..|.+.|..+||+
T Consensus 6 k~kelik~L~~~Gf~ 20 (70)
T d1whza_ 6 RPEEVARKLRRLGFV 20 (70)
T ss_dssp CHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHCCcE
Confidence 457899999999997
No 19
>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}
Probab=23.99 E-value=33 Score=19.98 Aligned_cols=16 Identities=19% Similarity=0.401 Sum_probs=13.5
Q ss_pred ehHHHHHHHHhhccce
Q 033957 42 TSYAVLERKLSSLGWE 57 (107)
Q Consensus 42 ~Sy~~LE~kL~~LGWe 57 (107)
...+.+.++|.+.|++
T Consensus 75 ~d~~~~~~~l~~~Gv~ 90 (140)
T d1npba_ 75 EDFEPLSQRLEQAGVT 90 (140)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCe
Confidence 4578899999999986
No 20
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}
Probab=21.90 E-value=26 Score=21.78 Aligned_cols=28 Identities=29% Similarity=0.320 Sum_probs=21.4
Q ss_pred EEEEccCCceeehHHHHHHHHhhccceeecC
Q 033957 31 VLVHVPTNEVMTSYAVLERKLSSLGWERYYD 61 (107)
Q Consensus 31 vLvh~ps~Evi~Sy~~LE~kL~~LGWeRYy~ 61 (107)
+-+.+-||. +...++..|..+||..||+
T Consensus 109 ~~~~v~t~~---~~~~~~~~l~~~gl~~~fd 136 (228)
T d2hcfa1 109 VLLGLLTGN---FEASGRHKLKLPGIDHYFP 136 (228)
T ss_dssp EEEEEECSS---CHHHHHHHHHTTTCSTTCS
T ss_pred ccccccCCC---cchhhhhhhhhhccccccc
Confidence 445555554 5678999999999999976
No 21
>d1xffa_ d.153.1.1 (A:) Glucosamine 6-phosphate synthase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.57 E-value=28 Score=23.29 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=22.4
Q ss_pred ceEEEEccCCceeehHHHHHHHHhhcccee
Q 033957 29 RKVLVHVPTNEVMTSYAVLERKLSSLGWER 58 (107)
Q Consensus 29 rKvLvh~ps~Evi~Sy~~LE~kL~~LGWeR 58 (107)
.-+||| |-.|++|.+|-++|.+.|+.-
T Consensus 92 ~~~~vh---NG~I~N~~~L~~~L~~~g~~f 118 (238)
T d1xffa_ 92 HIVVVH---NGIIENHEPLREELKARGYTF 118 (238)
T ss_dssp TEEEEE---EEEETTHHHHHHHHHHTTCCC
T ss_pred cEEEEE---cCcccCHHHHHHHHHHcCCCc
Confidence 356776 777899999999999999773
No 22
>d1v5xa_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermus thermophilus [TaxId: 274]}
Probab=20.91 E-value=18 Score=23.99 Aligned_cols=49 Identities=12% Similarity=0.093 Sum_probs=30.8
Q ss_pred ceEEEEccCCceeehHHHHHHHHhhccceeecCCCceeeeeecCceeEE-ecccccccccee
Q 033957 29 RKVLVHVPTNEVMTSYAVLERKLSSLGWERYYDDPELLQFHKRSTVHLI-SLPKDFNKFKSM 89 (107)
Q Consensus 29 rKvLvh~ps~Evi~Sy~~LE~kL~~LGWeRYy~d~~l~QfHkr~sv~LI-SLPrdF~~fks~ 89 (107)
.+|.|.+... .+.++..+..+| ++.+|+|-.-+.+.+ .|.+.|..++.+
T Consensus 54 ~~V~Vf~~~~-----~~~i~~~~~~~~-------~d~vQlHg~e~~~~~~~l~~~~~iik~~ 103 (200)
T d1v5xa_ 54 VRVGVFRDQP-----PEEVLRLMEEAR-------LQVAQLHGEEPPEWAEAVGRFYPVIKAF 103 (200)
T ss_dssp EEEEEESSCC-----HHHHHHHHHHTT-------CSEEEECSCCCHHHHHHHTTTSCEEEEE
T ss_pred eeeeeeeech-----hhhhhhhhcccc-------cccccccccCCHHHHHHHhhccccceee
Confidence 5788887654 477777777665 789999987554433 334444444433
No 23
>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.43 E-value=3.1 Score=26.12 Aligned_cols=16 Identities=19% Similarity=0.275 Sum_probs=13.8
Q ss_pred ceEEEEccCCceeehH
Q 033957 29 RKVLVHVPTNEVMTSY 44 (107)
Q Consensus 29 rKvLvh~ps~Evi~Sy 44 (107)
..+=|+.|+||...++
T Consensus 34 ~~~TvFaPtn~Af~~l 49 (157)
T d1o70a2 34 RRFTYFVPRDKGWQKT 49 (157)
T ss_dssp SEEEEEEECHHHHHHH
T ss_pred CceEEEecCHHHHHHh
Confidence 4788999999998876
No 24
>d1nh2c_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.19 E-value=27 Score=20.81 Aligned_cols=25 Identities=28% Similarity=0.493 Sum_probs=17.3
Q ss_pred eeEEE--eCceEEeeCCCccCCCCCCCcceEEEEccCCc
Q 033957 3 GVWVF--KNGVVRLENPGAEACSNSNTRRKVLVHVPTNE 39 (107)
Q Consensus 3 GVWvF--knGV~rlenp~~~~~~~~~~rrKvLvh~ps~E 39 (107)
+-|.| |+|||.+. .+-.+.+.++||
T Consensus 29 nKWK~~LKdGim~in------------gkdy~F~ka~GE 55 (59)
T d1nh2c_ 29 ARWKCSLKDGVVTIN------------RNDYTFQKAQVE 55 (59)
T ss_dssp TEEEEEEEEEEEEET------------TEEEEEEEEEEE
T ss_pred ceEEEEEeeeEEEEC------------CeEEEEeeceEE
Confidence 45876 89999883 135666666666
Done!