Query 033969
Match_columns 107
No_of_seqs 156 out of 1069
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:56:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 1.2E-44 4.2E-49 232.3 11.7 105 2-106 7-113 (125)
2 2h2y_A Ubiquitin-conjugating e 100.0 7.1E-44 2.4E-48 231.6 12.8 106 1-106 20-127 (136)
3 4gpr_A Ubiquitin-conjugating e 100.0 5.1E-44 1.8E-48 235.8 12.0 106 1-106 4-110 (151)
4 2ayv_A Ubiquitin-conjugating e 100.0 1E-43 3.5E-48 237.5 12.9 106 1-106 21-127 (166)
5 1z2u_A Ubiquitin-conjugating e 100.0 6.7E-44 2.3E-48 235.0 11.0 106 1-106 4-110 (150)
6 1fxt_A Ubiquitin-conjugating e 100.0 5.2E-44 1.8E-48 235.3 10.0 106 1-106 1-109 (149)
7 2c4o_A Ubiquitin-conjugating e 100.0 1.5E-43 5E-48 236.6 12.3 106 1-106 19-125 (165)
8 2r0j_A Ubiquitin carrier prote 100.0 9.2E-44 3.1E-48 234.2 11.0 105 2-106 2-107 (149)
9 2c2v_B Ubiquitin-conjugating e 100.0 1.1E-43 3.7E-48 234.9 10.7 106 1-106 5-111 (154)
10 2a7l_A Hypothetical ubiquitin- 100.0 1.4E-43 4.8E-48 230.2 10.8 104 3-106 24-132 (136)
11 1ayz_A UBC2, ubiquitin-conjuga 100.0 2.1E-43 7.2E-48 236.6 11.6 105 2-106 5-110 (169)
12 2e2c_A Ubiquitin conjugating e 100.0 3.4E-43 1.2E-47 233.0 12.2 106 1-106 9-115 (156)
13 1jat_A Ubiquitin-conjugating e 100.0 2.1E-43 7.3E-48 233.7 10.6 106 1-106 5-111 (155)
14 3h8k_A Ubiquitin-conjugating e 100.0 5.1E-43 1.8E-47 233.7 12.2 106 1-106 3-123 (164)
15 1zdn_A Ubiquitin-conjugating e 100.0 3.8E-43 1.3E-47 233.2 11.4 105 2-106 14-119 (158)
16 2aak_A UBC1, ubiquitin conjuga 100.0 5.8E-43 2E-47 231.0 11.6 105 2-106 5-110 (152)
17 1yh2_A HSPC150 protein similar 100.0 1.1E-42 3.9E-47 233.1 12.8 105 2-106 5-114 (169)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 1.2E-42 3.9E-47 232.2 12.7 105 2-106 5-124 (165)
19 1i7k_A Ubiquitin-conjugating e 100.0 5.8E-43 2E-47 236.2 10.8 106 1-106 30-136 (179)
20 2awf_A Ubiquitin-conjugating e 100.0 3.6E-42 1.2E-46 231.2 12.9 106 1-106 17-137 (172)
21 3rcz_B SUMO-conjugating enzyme 100.0 2E-42 6.9E-47 230.7 11.1 105 2-106 11-123 (163)
22 3bzh_A Ubiquitin-conjugating e 100.0 4.2E-42 1.4E-46 234.6 12.7 105 2-106 49-154 (194)
23 3rz3_A Ubiquitin-conjugating e 100.0 5.7E-42 1.9E-46 232.2 12.7 105 2-106 8-127 (183)
24 2pwq_A Ubiquitin conjugating e 100.0 1.8E-42 6.3E-47 239.6 9.8 106 1-106 23-130 (216)
25 2bep_A Ubiquitin-conjugating e 100.0 4.8E-42 1.6E-46 228.1 11.4 105 2-106 9-118 (159)
26 1yrv_A Ubiquitin-conjugating l 100.0 2.3E-42 7.9E-47 231.6 9.9 105 2-106 24-132 (169)
27 2f4z_A Tgtwinscan_2721 - E2 do 100.0 4.6E-42 1.6E-46 234.1 11.5 106 1-106 32-152 (193)
28 2gjd_A Ubiquitin-conjugating e 100.0 5.9E-42 2E-46 227.2 10.0 105 2-106 5-117 (157)
29 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-41 4.8E-46 233.2 12.2 106 1-106 5-115 (201)
30 1wzv_A Ubiquitin-conjugating e 100.0 1.1E-41 3.8E-46 225.4 10.9 105 1-106 4-111 (155)
31 2a4d_A Ubiquitin-conjugating e 100.0 5.1E-41 1.8E-45 223.1 12.2 105 2-106 26-138 (160)
32 2grr_A Ubiquitin-conjugating e 100.0 3.6E-41 1.2E-45 224.3 10.6 105 2-106 8-120 (161)
33 1tte_A Ubiquitin-conjugating e 100.0 5.9E-42 2E-46 236.9 7.0 106 1-106 2-110 (215)
34 1y8x_A Ubiquitin-conjugating e 100.0 4.6E-41 1.6E-45 223.6 10.5 102 2-106 7-110 (160)
35 3e46_A Ubiquitin-conjugating e 100.0 1.8E-40 6E-45 234.1 11.4 105 2-106 58-167 (253)
36 1c4z_D UBCH7, ubiquitin conjug 100.0 7.2E-41 2.5E-45 221.4 8.5 105 1-106 2-109 (154)
37 2q0v_A Ubiquitin-conjugating e 100.0 2.7E-40 9.4E-45 219.0 11.3 105 1-106 21-133 (156)
38 2nvu_C NEDD8-conjugating enzym 100.0 2E-40 6.8E-45 224.1 10.3 102 2-106 27-130 (180)
39 3fn1_B NEDD8-conjugating enzym 100.0 3.4E-40 1.2E-44 220.6 11.3 104 2-106 15-126 (167)
40 2hlw_A Ubiquitin-conjugating e 100.0 1.8E-40 6.3E-45 222.4 9.7 105 2-106 36-148 (170)
41 1jat_B Ubiquitin-conjugating e 100.0 4.2E-40 1.4E-44 214.3 10.8 104 2-106 7-118 (138)
42 2y9m_A Ubiquitin-conjugating e 100.0 1.3E-39 4.4E-44 218.8 11.6 105 2-106 7-127 (172)
43 2onu_A Ubiquitin-conjugating e 100.0 9.8E-41 3.3E-45 220.4 5.8 101 1-104 2-104 (152)
44 4ddg_A Ubiquitin-conjugating e 100.0 1.1E-39 3.8E-44 242.6 11.0 106 1-106 3-109 (399)
45 4ds2_A Ubiquitin-conjugating e 100.0 5.3E-40 1.8E-44 219.7 7.7 103 1-103 8-124 (167)
46 2z5d_A Ubiquitin-conjugating e 100.0 9.2E-40 3.1E-44 220.5 7.8 101 2-106 26-129 (179)
47 2f4w_A Ubiquitin-conjugating e 100.0 5.5E-39 1.9E-43 218.2 11.2 104 1-106 14-121 (187)
48 3o2u_A NEDD8-conjugating enzym 100.0 7.5E-39 2.6E-43 217.9 10.6 102 2-106 30-139 (190)
49 1zuo_A Hypothetical protein LO 100.0 2.1E-39 7.3E-44 220.0 6.7 105 2-106 28-150 (186)
50 1yf9_A Ubiquitin carrier prote 100.0 5.4E-39 1.9E-43 215.5 8.4 100 2-105 13-114 (171)
51 3ceg_A Baculoviral IAP repeat- 100.0 2.8E-37 9.6E-42 223.5 11.6 105 2-106 77-199 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 4.1E-32 1.4E-36 179.4 1.5 95 3-103 34-143 (172)
53 3kpa_A Probable ubiquitin fold 99.9 4.1E-23 1.4E-27 134.0 0.7 95 3-103 36-145 (168)
54 3r3q_A Suppressor protein STP2 99.8 1.4E-19 4.7E-24 120.0 7.8 102 4-106 31-151 (162)
55 3obq_A Tumor susceptibility ge 99.6 1.6E-15 5.3E-20 99.0 5.1 95 5-105 24-132 (146)
56 2ebm_A RWD domain-containing p 97.4 0.0016 5.3E-08 40.6 8.5 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 97.2 0.0048 1.6E-07 38.3 8.9 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 97.1 0.0078 2.7E-07 37.9 9.7 67 5-72 14-86 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 96.2 0.041 1.4E-06 34.3 8.2 67 4-71 13-86 (137)
60 2ebk_A RWD domain-containing p 96.1 0.014 4.7E-07 36.3 5.4 66 5-71 11-79 (128)
61 3zqs_A E3 ubiquitin-protein li 95.5 0.11 3.7E-06 34.8 8.2 75 4-103 4-79 (186)
62 2daw_A RWD domain containing p 93.2 0.098 3.4E-06 33.6 3.9 24 49-72 76-99 (154)
63 2dax_A Protein C21ORF6; RWD do 93.2 0.072 2.5E-06 34.0 3.1 24 49-72 74-97 (152)
64 3u3c_B Paxillin LD2 peptide; 4 79.2 1.6 5.4E-05 19.1 2.0 19 3-21 7-25 (26)
65 2bum_A Protocatechuate 3,4-dio 58.0 12 0.0004 25.2 3.7 25 46-70 109-138 (209)
66 2bum_B Protocatechuate 3,4-dio 38.9 20 0.00068 24.6 2.5 25 46-70 134-165 (241)
67 3pft_A Flavin reductase; desul 38.8 17 0.00058 22.8 2.0 30 62-91 42-74 (157)
68 3t63_M 3,4-PCD, protocatechuat 38.7 20 0.00069 24.6 2.5 24 47-70 134-164 (238)
69 3t63_A 3,4-PCD, protocatechuat 37.3 24 0.00083 23.5 2.6 23 48-70 102-129 (200)
70 1tmx_A Hydroxyquinol 1,2-dioxy 36.9 22 0.00077 25.1 2.5 25 46-70 183-225 (293)
71 2azq_A Catechol 1,2-dioxygenas 36.9 22 0.00075 25.4 2.5 24 47-70 184-225 (311)
72 2xsu_A Catechol 1,2 dioxygenas 36.6 23 0.00077 25.3 2.5 25 46-70 187-229 (312)
73 3n9t_A PNPC; phospholipid bind 35.8 24 0.00082 24.9 2.5 24 47-70 181-222 (290)
74 3rls_A YAF9, protein AF-9 homo 35.7 91 0.0031 20.3 6.0 43 27-71 29-71 (175)
75 2boy_A 3-chlorocatechol 1,2-di 34.5 26 0.0009 24.2 2.5 24 47-70 154-195 (254)
76 3th1_A Chlorocatechol 1,2-diox 33.8 42 0.0014 23.3 3.5 24 47-70 151-192 (260)
77 1dmh_A 1,2-CTD, catechol 1,2-d 33.3 27 0.00092 24.9 2.5 24 47-70 187-228 (311)
78 3hhy_A 1,2-CTD, catechol 1,2-d 31.2 27 0.00093 24.5 2.2 24 47-70 183-224 (280)
79 3qrl_A Transcription initiatio 28.8 1.1E+02 0.0038 19.2 5.8 43 30-74 32-77 (140)
80 2jrw_A Cyclic extended PEP.1; 27.6 11 0.00038 16.3 -0.2 12 65-76 8-19 (26)
81 1m46_B IQ4, IQ4 motif from MYO 27.6 43 0.0015 14.4 1.7 11 3-13 10-20 (26)
82 2c5k_P Vacuolar protein sortin 27.1 33 0.0011 15.2 1.3 12 4-15 13-24 (26)
83 2ecu_A Flavin reductase (HPAC) 26.9 15 0.0005 22.9 0.2 31 62-92 40-73 (149)
84 1u9d_A Hypothetical protein VC 26.6 1.1E+02 0.0039 18.6 4.5 26 3-28 33-58 (122)
85 3kxt_A Chromatin protein CREN7 26.2 50 0.0017 17.4 2.1 11 52-62 46-56 (56)
86 3o5u_A Chlorocatechol 1,2-diox 24.4 55 0.0019 22.6 2.8 25 46-70 155-198 (257)
87 3g9r_A Fusion complex of HIV-1 24.0 56 0.0019 16.0 2.0 13 3-15 30-42 (42)
88 4hx6_A Oxidoreductase; structu 23.5 21 0.00071 23.1 0.4 31 62-92 57-90 (185)
89 2d37_A Hypothetical NADH-depen 23.1 37 0.0013 21.7 1.6 29 62-90 60-91 (176)
90 3rco_A Tudor domain-containing 22.8 50 0.0017 19.1 1.9 18 2-19 30-47 (89)
91 3abf_A 4-oxalocrotonate tautom 22.8 81 0.0028 15.8 2.7 30 4-33 18-51 (64)
92 1b33_N Phycobilisome 7.8 KD li 22.5 91 0.0031 17.1 2.9 26 3-28 33-58 (67)
93 2qck_A Flavin reductase domain 21.9 24 0.00081 22.4 0.5 31 62-92 48-81 (167)
94 2r0x_A Possible flavin reducta 21.1 19 0.00066 22.4 -0.1 30 63-92 44-76 (158)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-44 Score=232.25 Aligned_cols=105 Identities=38% Similarity=0.706 Sum_probs=100.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccC-ccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i-~Hpnv~~ 80 (107)
|.+||+||+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|+||+++|.++|+|++||++|| |||
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~vl~si~ 113 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISGLVLSII 113 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEchhcCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999998 886
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.1e-44 Score=231.64 Aligned_cols=106 Identities=38% Similarity=0.699 Sum_probs=102.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccC-cccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i-~Hpnv~ 79 (107)
.|.+||++|+++++++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++|.++|+|+++|++|| +|+
T Consensus 100 ~~G~ICl~iL~~~WsP~~ti~~vL~si~ 127 (136)
T 2h2y_A 100 SNGDICLSVLGDDYNPSLSISGLILSII 127 (136)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCCEEECccccCCCCCCCcHHHHHHHHH
Confidence 999999999999999999999998 876
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.1e-44 Score=235.82 Aligned_cols=106 Identities=68% Similarity=1.295 Sum_probs=103.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|++||++|| +|+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSRVLLSIS 110 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEcccccCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999998 876
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1e-43 Score=237.54 Aligned_cols=106 Identities=78% Similarity=1.360 Sum_probs=103.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~vL~sI~ 127 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISKVLLSIS 127 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccccccCCCCCcHHHHHHHHH
Confidence 99999999999999999999998 876
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=6.7e-44 Score=235.03 Aligned_cols=106 Identities=77% Similarity=1.391 Sum_probs=103.2
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISKVLLSIC 110 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEeeccccCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999998 876
No 6
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=5.2e-44 Score=235.33 Aligned_cols=106 Identities=49% Similarity=0.983 Sum_probs=102.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCC-CCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
||.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 7899999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 80 S-NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
. +|.||+++|.++|+|++||++|| +|+
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~vl~~i~ 109 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKSALISLQ 109 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHHHHHHHH
T ss_pred CCCCeEeCCcCCCCCCCCCcHHHHHHHHH
Confidence 8 99999999999999999999998 876
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.5e-43 Score=236.60 Aligned_cols=106 Identities=78% Similarity=1.375 Sum_probs=103.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~vL~si~ 125 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISKVLLSIC 125 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEeehhhcCCCCCcCcHHHHHHHHH
Confidence 99999999999999999999998 876
No 8
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=9.2e-44 Score=234.17 Aligned_cols=105 Identities=48% Similarity=0.927 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
+.+||+||++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|.++|+|++||++|| +|+
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~ 107 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQ 107 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999998 876
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-43 Score=234.95 Aligned_cols=106 Identities=43% Similarity=0.833 Sum_probs=102.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 84 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 111 (154)
T 2c2v_B 85 LGRICLDILKDKWSPALQIRTVLLSIQ 111 (154)
T ss_dssp TCBBCCHHHHTSCCTTCCHHHHHHHHH
T ss_pred CCeEEchhccCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999998 876
No 10
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-43 Score=230.18 Aligned_cols=104 Identities=41% Similarity=0.795 Sum_probs=100.1
Q ss_pred HHHHHHHHHHhhcCCCCCeeEe--ecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCc--cccc
Q 033969 3 SKRILKELKDLQKDPPTSCSAG--PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVF--HPNI 78 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~--~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~--Hpnv 78 (107)
++||+||++++++++++|+.+. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999865 78899999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 79 NSNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 79 ~~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+.+|+||+++|.++|+|++||++|| +||
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 132 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQSVCLSII 132 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred CCCCeEEchhcCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999998 886
No 11
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-43 Score=236.62 Aligned_cols=105 Identities=40% Similarity=0.958 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|.++|+|+++|++|| +|+
T Consensus 85 G~ICl~iL~~~WsP~~~i~~vL~si~ 110 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVASILTSIQ 110 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CeEeehhhccCCCCcCcHHHHHHHHH
Confidence 9999999999999999999998 876
No 12
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-43 Score=232.98 Aligned_cols=106 Identities=39% Similarity=0.811 Sum_probs=102.7
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si~ 115 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRTILLSLQ 115 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CceEECccccccCCCCCcHHHHHHHHH
Confidence 99999999999999999999998 875
No 13
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.1e-43 Score=233.72 Aligned_cols=106 Identities=47% Similarity=0.857 Sum_probs=102.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|.+|| +|+
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~vl~~i~ 111 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRTVLLSIQ 111 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCEEEchhhccCCCCCCCHHHHHHHHH
Confidence 99999999999999999999998 876
No 14
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=5.1e-43 Score=233.68 Aligned_cols=106 Identities=44% Similarity=0.927 Sum_probs=101.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCC-CCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~-n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
+|++||+||++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 4789999999999999999999998876 999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCC-------------CcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDILK-------------EQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++|. ++|+|++||++|| +|+
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~ 123 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVV 123 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHH
Confidence 99999999996 7899999999998 886
No 15
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-43 Score=233.20 Aligned_cols=105 Identities=41% Similarity=0.790 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
|.+||+||+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|.++|+|+++|++|| +|+
T Consensus 94 G~iCl~iL~~~W~p~~~i~~vL~~i~ 119 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIRHVLLTIK 119 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHHHHHHHHH
T ss_pred CEEehhhcCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999998 876
No 16
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5.8e-43 Score=230.96 Aligned_cols=105 Identities=48% Similarity=1.006 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|.++|+|+++|++|| +|+
T Consensus 85 G~iCl~iL~~~W~p~~~i~~vl~~i~ 110 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAAILTSIQ 110 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CEEechhhcCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999998 876
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=233.07 Aligned_cols=105 Identities=40% Similarity=0.817 Sum_probs=102.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCC----CcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILK----EQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~----~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|. ++|+|+++|++|| +|+
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~vL~si~ 114 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIATVLTSIQ 114 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHHHHHHHH
T ss_pred CeEecccccCCcccCCCCCCcHHHHHHHHH
Confidence 999999998 8999999999998 886
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-42 Score=232.21 Aligned_cols=105 Identities=49% Similarity=1.022 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-CCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
|.+||+||+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 78999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCC-------------CCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDIL-------------KEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l-------------~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++| .++|+|++||++|| +|+
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 124 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVM 124 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHH
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHH
Confidence 999999999 68899999999998 886
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-43 Score=236.25 Aligned_cols=106 Identities=36% Similarity=0.696 Sum_probs=102.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
.|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~vL~sI~ 136 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRTILLSIQ 136 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccCcCcCCCCCCHHHHHHHHH
Confidence 99999999999999999999998 876
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.6e-42 Score=231.24 Aligned_cols=106 Identities=41% Similarity=0.924 Sum_probs=101.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecC-CCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~-~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
.|.+||+||+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 478999999999999999999999876 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCC-------------CcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDILK-------------EQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l~-------------~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++|. ++|+|+++|++|| +|+
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~ 137 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVI 137 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHH
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHH
Confidence 99999999996 6899999999998 886
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2e-42 Score=230.70 Aligned_cols=105 Identities=36% Similarity=0.854 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCC-----CCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccc
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (107)
|++||+||+++|++++++|+.+.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999998876 999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCC--cCCccCCHhhhh-ccc
Q 033969 77 NINSNGSICLDILKE--QWSPALTISKVW-SIN 106 (107)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il-~i~ 106 (107)
||+.+|.||+++|.+ +|+|++||++|| +|+
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~ 123 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQILLGIQ 123 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHHHHHHHH
Confidence 999999999999975 499999999998 886
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=4.2e-42 Score=234.59 Aligned_cols=105 Identities=63% Similarity=1.207 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~ 81 (107)
|.+||++|+++|++++++++.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 82 GSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 82 G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|.||+++|.++|+|+++|.+|| +|+
T Consensus 129 G~ICL~iL~~~WsP~~ti~~vL~sI~ 154 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTISKVLLSIC 154 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CceechhhhccCCCcCcHHHHHHHHH
Confidence 9999999999999999999998 876
No 23
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.7e-42 Score=232.21 Aligned_cols=105 Identities=38% Similarity=0.863 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
|.|||++|+++|++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 68999999999999999999998 67789999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCC-------------CcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILK-------------EQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~-------------~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|. ++|+|++||++|| +|+
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~ 127 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVI 127 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHHHHHHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHH
Confidence 9999999996 8899999999998 876
No 24
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=1.8e-42 Score=239.57 Aligned_cols=106 Identities=45% Similarity=0.888 Sum_probs=102.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc-
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN- 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~- 79 (107)
+|.+||+||+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 23 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~ 102 (216)
T 2pwq_A 23 KELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISS 102 (216)
T ss_dssp HHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcC
Confidence 3789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++|.++|+|++||++|| +||
T Consensus 103 ~~G~ICL~iL~~~WsP~~ti~~VL~sI~ 130 (216)
T 2pwq_A 103 QTGAICLDVLKNEWSPALTIRTALLSIQ 130 (216)
T ss_dssp TTCBBCCHHHHHHCCTTCCHHHHHHHHH
T ss_pred CCCEEEchhhcccCCCCCcHHHHHHHHH
Confidence 589999999999999999999998 886
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.8e-42 Score=228.05 Aligned_cols=105 Identities=45% Similarity=0.879 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccc
Q 033969 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (107)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 78 (107)
|.+||+||+++|+++ +++++++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 689999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 79 N-SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+ .+|.||+++|.++|+|+++|++|| +|+
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~ 118 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRTVLLSLQ 118 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCEEeChhhhccCCCCCcHHHHHHHHH
Confidence 9 499999999999999999999998 886
No 26
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.3e-42 Score=231.56 Aligned_cols=105 Identities=35% Similarity=0.713 Sum_probs=101.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccc-cC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI-NS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv-~~ 80 (107)
|.+||+||+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999 78
Q ss_pred CCcEeccCCC--CcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILK--EQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~--~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|. ++|+|+++|++|| +|+
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~vL~sI~ 132 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSSILLALQ 132 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHHHHHHHH
T ss_pred CCeEeehhhcCCcCCCCcCCHHHHHHHHH
Confidence 9999999998 8999999999998 886
No 27
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-42 Score=234.15 Aligned_cols=106 Identities=50% Similarity=0.931 Sum_probs=99.4
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeE
Q 033969 1 MASKRILKELKDLQKDPP-------------TSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKV 67 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v 67 (107)
+|.+||+||+++|+++++ .|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 478999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccc-CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 68 AFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 68 ~f~t~i~Hpnv~-~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.|+||||||+ .+|.||+++|.++|+|+++|++|| +|+
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 152 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQ 152 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHH
Confidence 999999999999 599999999999999999999998 886
No 28
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=5.9e-42 Score=227.25 Aligned_cols=105 Identities=39% Similarity=0.825 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccc
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (107)
|.+||++|++++++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999998875 4899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCC--cCCccCCHhhhh-ccc
Q 033969 77 NINSNGSICLDILKE--QWSPALTISKVW-SIN 106 (107)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il-~i~ 106 (107)
||+.+|.||+++|.+ +|+|+++|++|| +|+
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~ 117 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQIVLGVQ 117 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHHHHHHHH
Confidence 999999999999976 799999999998 876
No 29
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.4e-41 Score=233.16 Aligned_cols=106 Identities=44% Similarity=0.879 Sum_probs=101.3
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccc
Q 033969 1 MASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (107)
+|.+||+||+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4799999999999987 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 78 IN-SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 78 v~-~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|+ .+|.||+++|.++|+|+++|++|| +|+
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~ 115 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRTVLLSLQ 115 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CcCCCCeeeCcccccCCCCCCCHHHHHHHHH
Confidence 99 499999999999999999999998 876
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.1e-41 Score=225.44 Aligned_cols=105 Identities=44% Similarity=0.919 Sum_probs=100.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeE-eecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSA-GPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~-~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
+|.+||++|+++|++++++|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEeccCC-CCcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDIL-KEQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l-~~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++| .++|+|+++|++|| +|+
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~ 111 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQVLEALN 111 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHHHHHHHH
T ss_pred CCCeEeecCCCccCCCCCCcHHHHHHHHH
Confidence 9999999999 89999999999998 876
No 31
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=5.1e-41 Score=223.14 Aligned_cols=105 Identities=31% Similarity=0.553 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEee-cCCC--CceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccc
Q 033969 2 ASKRILKELKDLQKDPPTS-CSAGP-VAED--MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~-~~~n--~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (107)
|.+||+||+++++++++++ +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 6789999999999998887 77876 3454 899999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCC--CcCCccCCHhhhh-ccc
Q 033969 78 IN-SNGSICLDILK--EQWSPALTISKVW-SIN 106 (107)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il-~i~ 106 (107)
|+ .+|+||+++|. ++|+|+++|++|| +||
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 138 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 138 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHH
T ss_pred EECCCCEEehhhcCCccCCCccCcHHHHHHHHH
Confidence 99 69999999997 8999999999998 886
No 32
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3.6e-41 Score=224.28 Aligned_cols=105 Identities=38% Similarity=0.813 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecC-----CCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccc
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVA-----EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (107)
|.+||+||+++|++++++|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998763 6899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCC--cCCccCCHhhhh-ccc
Q 033969 77 NINSNGSICLDILKE--QWSPALTISKVW-SIN 106 (107)
Q Consensus 77 nv~~~G~icl~~l~~--~W~p~~~i~~il-~i~ 106 (107)
||+.+|.||+++|.+ +|+|+++|++|| +|+
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~ 120 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQILLGIQ 120 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHH
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHH
Confidence 999999999999975 899999999998 876
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=5.9e-42 Score=236.91 Aligned_cols=106 Identities=47% Similarity=0.968 Sum_probs=101.4
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCC-CceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n-~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
+|.+||++|+++|++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 58899999999999999999999988774 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 80 S-NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~-~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
. +|.||+++|.++|+|++||.+|| +||
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~ 110 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQ 110 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHH
Confidence 8 99999999999999999999998 886
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-41 Score=223.55 Aligned_cols=102 Identities=36% Similarity=0.793 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
|.+||++|++++ ++++++++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 467899998 7889999999998 899999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~vL~~i~ 110 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINSIIYGLQ 110 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred CCeEEcccchhhccCCCCHHHHHHHHH
Confidence 99999999999999999999998 886
No 35
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.8e-40 Score=234.10 Aligned_cols=105 Identities=45% Similarity=0.879 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccc
Q 033969 2 ASKRILKELKDLQKD---PPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (107)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv 78 (107)
|.+||+||+++|+++ ++.++++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 789999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 79 N-SNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 79 ~-~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+ .+|.||+++|.++|+|+++|++|| +|+
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~ 167 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRTVLLSLQ 167 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHHHHHHHH
T ss_pred cCCCCeeecccccCCCCCCCCHHHHHHHHH
Confidence 9 499999999999999999999998 876
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=7.2e-41 Score=221.35 Aligned_cols=105 Identities=39% Similarity=0.860 Sum_probs=97.5
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEe-ecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc
Q 033969 1 MASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~ 79 (107)
+|.+||++|+++|++++++|+.+. +.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 478999999999999999999855 46789999999998 9999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCC-CcCCccCCHhhhh-ccc
Q 033969 80 SNGSICLDILK-EQWSPALTISKVW-SIN 106 (107)
Q Consensus 80 ~~G~icl~~l~-~~W~p~~~i~~il-~i~ 106 (107)
.+|.||+++|. ++|+|++||++|| +|+
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~ 109 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLI 109 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHH
Confidence 99999999996 8999999999998 886
No 37
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=2.7e-40 Score=218.97 Aligned_cols=105 Identities=30% Similarity=0.552 Sum_probs=97.7
Q ss_pred ChHHHHHHHHHHhhcC-CCCCeeEeecC-C--CCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccc
Q 033969 1 MASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hp 76 (107)
.|.+||+||+++++++ +++++++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 21 ~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 100 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMS 100 (156)
T ss_dssp CHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccC
Confidence 3789999999999998 78899998854 3 599999999999999999999999999999999999999999999999
Q ss_pred cccCCCcE---eccCCCCcCCccCCHhhhh-ccc
Q 033969 77 NINSNGSI---CLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 77 nv~~~G~i---cl~~l~~~W~p~~~i~~il-~i~ 106 (107)
||+.+|+| |+++|. +|+|+++|++|| +||
T Consensus 101 NV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~ 133 (156)
T 2q0v_A 101 CVDNCGRVIKNNLHILK-NWNRNYTIETILISLR 133 (156)
T ss_dssp TBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHH
T ss_pred CCccCCeEehhhccccc-CCCCcCcHHHHHHHHH
Confidence 99999999 888886 599999999998 886
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-40 Score=224.10 Aligned_cols=102 Identities=35% Similarity=0.757 Sum_probs=97.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe-ecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
|.+||++|+++| ++++++++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 789999999999 567899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|+++|++|| +|+
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~vL~si~ 130 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINSIIYGLQ 130 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CCcEEcccccccCCCCCCHHHHHHHHH
Confidence 99999999999999999999998 876
No 39
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.4e-40 Score=220.62 Aligned_cols=104 Identities=35% Similarity=0.705 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeec-CCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~-~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
|.+||++|+++|++++++|+++.+. ++|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 6799999999999999999999854 57899999998 899999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCC------cCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKE------QWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~------~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.. +|+|+++|++|| +|+
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~ 126 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKDVVWGLN 126 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHH
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHHHHHHHH
Confidence 99999999975 799999999998 876
No 40
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=222.45 Aligned_cols=105 Identities=31% Similarity=0.553 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEee-cCCC--CceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccc
Q 033969 2 ASKRILKELKDLQKDPPTS-CSAGP-VAED--MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~-~~~n--~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (107)
|.+||+||+++++++++++ +.+.+ .++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 6899999999999998887 67776 4454 999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCC--CcCCccCCHhhhh-ccc
Q 033969 78 IN-SNGSICLDILK--EQWSPALTISKVW-SIN 106 (107)
Q Consensus 78 v~-~~G~icl~~l~--~~W~p~~~i~~il-~i~ 106 (107)
|+ .+|.||+++|. ++|+|++||++|| +||
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~ 148 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKVVLQELR 148 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHH
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHH
Confidence 99 79999999997 8999999999998 886
No 41
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.2e-40 Score=214.32 Aligned_cols=104 Identities=35% Similarity=0.681 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEeecC-C--CCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccc
Q 033969 2 ASKRILKELKDLQKD-PPTSCSAGPVA-E--DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (107)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpn 77 (107)
+.+||+||+++++++ +++++++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 578999999999998 78899998854 3 4999999999999999999999999999999999999999999999999
Q ss_pred ccCC-CcE--eccCCCCcCCccCCHhhhh-ccc
Q 033969 78 INSN-GSI--CLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 78 v~~~-G~i--cl~~l~~~W~p~~~i~~il-~i~ 106 (107)
|+.+ |.| |+++|. +|+|+++|++|| +|+
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~ 118 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLR 118 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHH
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHHHHHHHH
Confidence 9986 999 899885 899999999998 886
No 42
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.3e-39 Score=218.79 Aligned_cols=105 Identities=37% Similarity=0.741 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---CeeEee-cCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEE
Q 033969 2 ASKRILKELKDLQK-D-P------PT---SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAF 69 (107)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f 69 (107)
|.+||+||+++|++ . + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 67999999999998 4 3 33 456777 77899999999999999999999999999999999999999999
Q ss_pred ec-cCcccccc-CCCcEeccCCC-CcCCccCCHhhhh-ccc
Q 033969 70 RT-KVFHPNIN-SNGSICLDILK-EQWSPALTISKVW-SIN 106 (107)
Q Consensus 70 ~t-~i~Hpnv~-~~G~icl~~l~-~~W~p~~~i~~il-~i~ 106 (107)
.| ++|||||+ .+|.||+++|. ++|+|+++|++|| +|+
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~ 127 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVW 127 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHH
Confidence 99 99999996 79999999998 8999999999998 886
No 43
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=9.8e-41 Score=220.37 Aligned_cols=101 Identities=27% Similarity=0.660 Sum_probs=95.7
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
.|.+||+||++++++. |+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 3789999999999874 7888889999999999999999999999999999999999999999999999999999994
Q ss_pred -CCcEeccCCCCcCCccCCHhhhh-c
Q 033969 81 -NGSICLDILKEQWSPALTISKVW-S 104 (107)
Q Consensus 81 -~G~icl~~l~~~W~p~~~i~~il-~ 104 (107)
+|.||+++|.++|+|+++|++|| +
T Consensus 79 ~~G~iCl~il~~~W~p~~~i~~vl~~ 104 (152)
T 2onu_A 79 ASGSVCLDVINQTWTPLYSLVNVFEV 104 (152)
T ss_dssp TTCBBCHHHHHHHCCTTCCHHHHHHT
T ss_pred cCCeEecccccccCCCCCCHHHHHHH
Confidence 99999999999999999999998 7
No 44
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.1e-39 Score=242.61 Aligned_cols=106 Identities=77% Similarity=1.339 Sum_probs=103.5
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
||+|||+||+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++|.++|+|++||++|| +|+
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~vL~~i~ 109 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISKVLLSIC 109 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHHHHHHHH
T ss_pred CCeEeCcccccCCCccccHHHHHHHHH
Confidence 99999999999999999999998 876
No 45
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=5.3e-40 Score=219.72 Aligned_cols=103 Identities=31% Similarity=0.673 Sum_probs=98.1
Q ss_pred ChHHHHHHHHHHhhcCC------------CCCeeEeecCCCCceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCCCCe
Q 033969 1 MASKRILKELKDLQKDP------------PTSCSAGPVAEDMFHWQATIMGPPDSPYA--GGVFLVSIHFPPDYPFKPPK 66 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~------------~~~~~~~~~~~n~~~w~~~i~gp~~t~y~--g~~~~~~i~fp~~YP~~pP~ 66 (107)
+|.+||+||+++|++++ +.++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+
T Consensus 8 ~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~ 87 (167)
T 4ds2_A 8 ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPT 87 (167)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCE
T ss_pred HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCE
Confidence 37899999999999876 67899999999999999999999999999 99999999999999999999
Q ss_pred EEEeccCccccccCCCcEeccCCCCcCCccCCHhhhh
Q 033969 67 VAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVW 103 (107)
Q Consensus 67 v~f~t~i~Hpnv~~~G~icl~~l~~~W~p~~~i~~il 103 (107)
|+|.|++|||||+.+|.||+++|.++|+|+++++++|
T Consensus 88 v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vl 124 (167)
T 4ds2_A 88 VRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVI 124 (167)
T ss_dssp EEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHH
T ss_pred EEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHH
Confidence 9999999999999999999999999999999998853
No 46
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=220.51 Aligned_cols=101 Identities=29% Similarity=0.762 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC-
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~- 80 (107)
|.+||+||+++|++ +++++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 67999999999985 47888876 57899999999999999999999999999999999999999999999999998
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-c-cc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-S-IN 106 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~-i~ 106 (107)
+|.||+++|.++|+|+++|++|| + |+
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~iL~s~I~ 129 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTNIFESFLP 129 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTHHHHTHHH
T ss_pred CCeEeccccccCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999998 8 65
No 47
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.5e-39 Score=218.15 Aligned_cols=104 Identities=29% Similarity=0.702 Sum_probs=93.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccC
Q 033969 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (107)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~ 80 (107)
.|.+||++|+++|++++++++.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCcEeccCC---CCcCCccCCHhhhh-ccc
Q 033969 81 NGSICLDIL---KEQWSPALTISKVW-SIN 106 (107)
Q Consensus 81 ~G~icl~~l---~~~W~p~~~i~~il-~i~ 106 (107)
+|.||+++| .++|+|+++|.+|| +|+
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~vL~si~ 121 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVSTILTGLL 121 (187)
T ss_dssp TSCBC----------CCTTCCHHHHHHHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHHHHHHHH
Confidence 999999999 68999999999998 876
No 48
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=7.5e-39 Score=217.95 Aligned_cols=102 Identities=33% Similarity=0.682 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEe----ecCCCCc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCc
Q 033969 2 ASKRILKELKDLQKDPPTSCSAG----PVAEDMF---HWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~----~~~~n~~---~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~ 74 (107)
|.+||+||+++|+ +++++.+. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 7899999999998 67899998 7889999 9999997 88899999999999999999999999999999999
Q ss_pred cccccCCCcEeccCCCCcCCccCCHhhhh-ccc
Q 033969 75 HPNINSNGSICLDILKEQWSPALTISKVW-SIN 106 (107)
Q Consensus 75 Hpnv~~~G~icl~~l~~~W~p~~~i~~il-~i~ 106 (107)
||||+.+|.||+++|.++|+|+++|++|| +|+
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~ 139 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQSIITGLL 139 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHH
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999998 876
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.1e-39 Score=219.99 Aligned_cols=105 Identities=30% Similarity=0.643 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHhhcCC---CCCeeEeecCCCCceEEEEEeCC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCe
Q 033969 2 ASKRILKELKDLQKDP---PTSCSAGPVAEDMFHWQATIMGP-PDSPYAG-----------GVFLVSIHFPPDYPFKPPK 66 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~~~~~~~~~n~~~w~~~i~gp-~~t~y~g-----------~~~~~~i~fp~~YP~~pP~ 66 (107)
|.+||++|+++|++++ +.++.+.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 7899999999999987 68899999999999999999997 9999998 8999999999999999999
Q ss_pred EEEeccCccc-cccCCCcEeccCCC-CcCCccCCHhhhh-ccc
Q 033969 67 VAFRTKVFHP-NINSNGSICLDILK-EQWSPALTISKVW-SIN 106 (107)
Q Consensus 67 v~f~t~i~Hp-nv~~~G~icl~~l~-~~W~p~~~i~~il-~i~ 106 (107)
|+|.|++||| ||+.+|.||+++|. ++|+|+++|++|| +|+
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~ 150 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQIN 150 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHH
Confidence 9999999999 69999999999996 7899999999998 886
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=5.4e-39 Score=215.52 Aligned_cols=100 Identities=25% Similarity=0.723 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCcccccc-C
Q 033969 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~-~ 80 (107)
|.+||++|+++|++++. ++ ..++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999873 33 3578999999999999999999999999999999999999999999999999999 4
Q ss_pred CCcEeccCCCCcCCccCCHhhhh-cc
Q 033969 81 NGSICLDILKEQWSPALTISKVW-SI 105 (107)
Q Consensus 81 ~G~icl~~l~~~W~p~~~i~~il-~i 105 (107)
+|.||+++|.++|+|+++|++|| +|
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~vL~si 114 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLENIFDVF 114 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHHHHHTH
T ss_pred CCeEeccccccCCCCCCcHHHHHHHH
Confidence 99999999999999999999998 76
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=223.51 Aligned_cols=105 Identities=35% Similarity=0.676 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHhhcCCCCC----eeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecc-----
Q 033969 2 ASKRILKELKDLQKDPPTS----CSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTK----- 72 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~----- 72 (107)
|.+||++|+++|+++++++ +.+.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 6899999999999987764 4567789999999999999999999999999999999999999999999998
Q ss_pred CccccccCCCcEeccCCC-------CcCCccC-CHhhhh-ccc
Q 033969 73 VFHPNINSNGSICLDILK-------EQWSPAL-TISKVW-SIN 106 (107)
Q Consensus 73 i~Hpnv~~~G~icl~~l~-------~~W~p~~-~i~~il-~i~ 106 (107)
+|||||+.+|.||+++|. ++|+|++ ||.+|| |||
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIq 199 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQ 199 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHH
Confidence 999999999999999997 6899999 899998 886
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.97 E-value=4.1e-32 Score=179.40 Aligned_cols=95 Identities=18% Similarity=0.299 Sum_probs=89.0
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEEecc
Q 033969 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
.+||++|+++|++ ++.+.++|++.|...+.||++|+|+|| .|++++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999998 477788999999999999999999999 999999999999999999999998
Q ss_pred -CccccccCCCcEeccCC-CC---cCCccCCHhhhh
Q 033969 73 -VFHPNINSNGSICLDIL-KE---QWSPALTISKVW 103 (107)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~---~W~p~~~i~~il 103 (107)
++||||+.+|+||||+| .+ .|+|+++|..+|
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL 143 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLM 143 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHHHHH
Confidence 99999999999999999 43 456999999998
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.85 E-value=4.1e-23 Score=134.01 Aligned_cols=95 Identities=23% Similarity=0.405 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEEecc
Q 033969 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
..||.+||+.|.+ +++.++++-..|...+.||++|+|+|+ .|++++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999976 566666777899999999999999999 899999999999999999999995
Q ss_pred -CccccccCCCcEeccCC-CCcC---CccCCHhhhh
Q 033969 73 -VFHPNINSNGSICLDIL-KEQW---SPALTISKVW 103 (107)
Q Consensus 73 -i~Hpnv~~~G~icl~~l-~~~W---~p~~~i~~il 103 (107)
.+|||++.+|+|||+++ ...| .|.++|...|
T Consensus 110 dgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahal 145 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVL 145 (168)
T ss_dssp TTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHH
T ss_pred cCcCccccCCCcEEeccccchhhHhcCCchhHHHHH
Confidence 89999999999999987 1112 3445555544
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.80 E-value=1.4e-19 Score=119.98 Aligned_cols=102 Identities=23% Similarity=0.338 Sum_probs=81.2
Q ss_pred HHHHHHHHHhhcCCC---CCeeEeecCCCCceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCeEEEec------
Q 033969 4 KRILKELKDLQKDPP---TSCSAGPVAEDMFHWQATIMGPPDSPYAGGV---FLVSIHFPPDYPFKPPKVAFRT------ 71 (107)
Q Consensus 4 ~RL~~E~~~l~~~~~---~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~---~~~~i~fp~~YP~~pP~v~f~t------ 71 (107)
+|..+|+.++.+.-+ +...+...++...++-+.+.|.-..+|+|+. |.+.|.||.+||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 567788887765422 2233445566677788888887779999998 8899999999999999998865
Q ss_pred -c---Cc-cccccCCCcEeccCCCCcCCc-cCCHhhhh-ccc
Q 033969 72 -K---VF-HPNINSNGSICLDILKEQWSP-ALTISKVW-SIN 106 (107)
Q Consensus 72 -~---i~-Hpnv~~~G~icl~~l~~~W~p-~~~i~~il-~i~ 106 (107)
+ |+ |||||.+|+||+++| ++|+| +.++.++| +|+
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~~ll~~l~ 151 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLIMVVQELM 151 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHHHHHHHHH
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHHHHHHHHH
Confidence 1 77 999999999999999 56999 68999988 653
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.58 E-value=1.6e-15 Score=98.98 Aligned_cols=95 Identities=19% Similarity=0.376 Sum_probs=71.7
Q ss_pred HHHHHHHHhhcCCCC-CeeEe---ecCCCCceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCeEEEecc------
Q 033969 5 RILKELKDLQKDPPT-SCSAG---PVAEDMFHWQATIMGPPDSPYAGGVFLV--SIHFPPDYPFKPPKVAFRTK------ 72 (107)
Q Consensus 5 RL~~E~~~l~~~~~~-~~~~~---~~~~n~~~w~~~i~gp~~t~y~g~~~~~--~i~fp~~YP~~pP~v~f~t~------ 72 (107)
+..+|..++.+.-+. ..... -...++..|.++|. .+|+|+.|.+ .|.||++||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 345677666554221 11111 22357899999997 5799999985 999999999999999 6655
Q ss_pred CccccccCCCcEeccCCCCcCCc-cCCHhhhh-cc
Q 033969 73 VFHPNINSNGSICLDILKEQWSP-ALTISKVW-SI 105 (107)
Q Consensus 73 i~Hpnv~~~G~icl~~l~~~W~p-~~~i~~il-~i 105 (107)
..|||||.+|+||++.|.+ |++ ..+|.+++ ++
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~-W~~~~snL~~ll~~l 132 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE-WKHPQSDLLGLIQVM 132 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT-CCTTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCEecccccc-cCCCCCCHHHHHHHH
Confidence 5899999999999999955 987 88999887 54
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=0.0016 Score=40.62 Aligned_cols=66 Identities=15% Similarity=0.163 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 033969 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (107)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (107)
.+...|+..|..--+..+.+. +.....+.+.+....+..-+.-.+.+.+.+|++||.+||.+.+.+
T Consensus 13 e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888887655555442 333456666665322222233478999999999999999998865
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=97.16 E-value=0.0048 Score=38.34 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=43.5
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC--CCCceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCCCCeEEEecc
Q 033969 5 RILKELKDLQKDPPTSCSAGPVA--EDMFHWQATIMGPPDSPYA--GGVFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~--~n~~~w~~~i~gp~~t~y~--g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
+...|+..|..--+..+.+.... .+...+.+.+..+.+..-+ .-.+.+.|.+|++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 56788988887665666553222 1234455555422221111 24788999999999999999988764
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.0078 Score=37.87 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=43.0
Q ss_pred HHHHHHHHhhcCCCCCeeEeecC------CCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecc
Q 033969 5 RILKELKDLQKDPPTSCSAGPVA------EDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~------~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
+...|+..|..--+..+.+.-.. .....+.+.+....+ .-..-.+.+.|.+|++||.++|.|.+.+.
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 45668888877654444332111 124667777763222 11234788999999999999999998653
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=96.23 E-value=0.041 Score=34.34 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhcCCCCCeeEeecCC-----CCceEEEEEeCCCC-C-CCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 033969 4 KRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPD-S-PYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (107)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~-----n~~~w~~~i~gp~~-t-~y~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (107)
.+...|+..|..--+..+.+..... ......+.+. +.+ . .-..-.+.+.|.||++||.++|.|.+..
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3566788888776555554422111 1345666665 322 1 0012468999999999999999998843
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.08 E-value=0.014 Score=36.27 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=40.9
Q ss_pred HHHHHHHHhhcCCCC--CeeEee-cCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 033969 5 RILKELKDLQKDPPT--SCSAGP-VAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (107)
Q Consensus 5 RL~~E~~~l~~~~~~--~~~~~~-~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (107)
+...|+..|..--+. .+.+.- ...+...+.+.+.. .+..-..-.+.+.+.+|++||..+|.+.+.+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 456788888765332 343321 11234577777763 2211112478999999999999999987653
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=95.52 E-value=0.11 Score=34.77 Aligned_cols=75 Identities=15% Similarity=0.313 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhcCCCCCee-EeecCCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEeccCccccccCCC
Q 033969 4 KRILKELKDLQKDPPTSCS-AGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNG 82 (107)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~-~~~~~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t~i~Hpnv~~~G 82 (107)
.+|.+|+.++ |.. +.-.+.++....+.+.... |..+.+++.++.+||.++|.+..--+. |.
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~--~~----- 65 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV--PF----- 65 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS--CC-----
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC--Cc-----
Confidence 3678888887 221 3334677888888888433 579999999999999999987654442 11
Q ss_pred cEeccCCCCcCCccCCHhhhh
Q 033969 83 SICLDILKEQWSPALTISKVW 103 (107)
Q Consensus 83 ~icl~~l~~~W~p~~~i~~il 103 (107)
.-.|+|..++.+++
T Consensus 66 -------~~~w~~~ssL~~v~ 79 (186)
T 3zqs_A 66 -------CASWTPQSSLISIY 79 (186)
T ss_dssp -------CCCCCTTCCHHHHH
T ss_pred -------ccccCCCccHHHHH
Confidence 14699888998887
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.25 E-value=0.098 Score=33.59 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=21.9
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc
Q 033969 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 49 ~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987764
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.17 E-value=0.072 Score=34.00 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.4
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc
Q 033969 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (107)
Q Consensus 49 ~~~~~i~fp~~YP~~pP~v~f~t~ 72 (107)
.+.+.|.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 688999999999999999988764
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=79.23 E-value=1.6 Score=19.08 Aligned_cols=19 Identities=37% Similarity=0.704 Sum_probs=15.9
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 033969 3 SKRILKELKDLQKDPPTSC 21 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~ 21 (107)
..||.-|+...+.+++.|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 5789999999999888763
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=58.02 E-value=12 Score=25.21 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.4
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEEe
Q 033969 46 AGGVFLVSIHFPPDYPF-----KPPKVAFR 70 (107)
Q Consensus 46 ~g~~~~~~i~fp~~YP~-----~pP~v~f~ 70 (107)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 89999886
No 66
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=38.91 E-value=20 Score=24.62 Aligned_cols=25 Identities=24% Similarity=0.679 Sum_probs=21.8
Q ss_pred CCCEEEEEEEcCCCCC-------CCCCeEEEe
Q 033969 46 AGGVFLVSIHFPPDYP-------FKPPKVAFR 70 (107)
Q Consensus 46 ~g~~~~~~i~fp~~YP-------~~pP~v~f~ 70 (107)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 3589999999999998 489999986
No 67
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=38.77 E-value=17 Score=22.83 Aligned_cols=30 Identities=30% Similarity=0.566 Sum_probs=23.6
Q ss_pred CCCCeEEEe---ccCccccccCCCcEeccCCCC
Q 033969 62 FKPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (107)
Q Consensus 62 ~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~ 91 (107)
.+||.|.+. +.--|++|..+|..|+++|.+
T Consensus 42 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 74 (157)
T 3pft_A 42 LEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGE 74 (157)
T ss_dssp TTTTEEEEEEETTCSSHHHHTTSSCEEEEECBT
T ss_pred CCCcEEEEEECCCCchHHHHHhCCEEEEEECCH
Confidence 378988774 335688999999999999964
No 68
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=38.66 E-value=20 Score=24.57 Aligned_cols=24 Identities=21% Similarity=0.484 Sum_probs=21.8
Q ss_pred CCEEEEEEEcCCCCCC-------CCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYPF-------KPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP~-------~pP~v~f~ 70 (107)
.|.|.|+-.+|--||. .||.|.|.
T Consensus 134 ~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 134 DGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 5899999999999996 79999986
No 69
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=37.29 E-value=24 Score=23.47 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=21.2
Q ss_pred CEEEEEEEcCCCCCCC-----CCeEEEe
Q 033969 48 GVFLVSIHFPPDYPFK-----PPKVAFR 70 (107)
Q Consensus 48 ~~~~~~i~fp~~YP~~-----pP~v~f~ 70 (107)
|.|.|+-.+|--||.. ||.|.|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 8999886
No 70
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=36.92 E-value=22 Score=25.13 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=21.5
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4689999999999998 459999885
No 71
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=36.87 E-value=22 Score=25.38 Aligned_cols=24 Identities=25% Similarity=0.445 Sum_probs=21.0
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 184 ~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 184 EGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 489999999999998 469999985
No 72
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=36.62 E-value=23 Score=25.34 Aligned_cols=25 Identities=20% Similarity=0.478 Sum_probs=21.3
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
+.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 3588999999999998 579999885
No 73
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=35.75 E-value=24 Score=24.94 Aligned_cols=24 Identities=29% Similarity=0.715 Sum_probs=21.1
Q ss_pred CCEEEEEEEcCCCCCC------------------CCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYPF------------------KPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP~------------------~pP~v~f~ 70 (107)
.|.|.|+-.+|--||. .||.|.|.
T Consensus 181 ~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 181 DGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 4899999999999994 69999885
No 74
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=35.70 E-value=91 Score=20.32 Aligned_cols=43 Identities=21% Similarity=0.346 Sum_probs=30.5
Q ss_pred CCCCceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q 033969 27 AEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (107)
Q Consensus 27 ~~n~~~w~~~i~gp~~t~y~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (107)
++.-.+|.+.+.|+.+.-...-.=++.+.+.+.||. |.-.+..
T Consensus 29 ~~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~ 71 (175)
T 3rls_A 29 AEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEA 71 (175)
T ss_dssp TTCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECS
T ss_pred CCCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeC
Confidence 346789999999987654444567788899999974 4444443
No 75
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=34.54 E-value=26 Score=24.23 Aligned_cols=24 Identities=21% Similarity=0.571 Sum_probs=20.6
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 154 ~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 154 NGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 489999999999887 478999885
No 76
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=33.76 E-value=42 Score=23.29 Aligned_cols=24 Identities=29% Similarity=0.699 Sum_probs=19.7
Q ss_pred CCEEEEEEEcCCCC------------------CCCCCeEEEe
Q 033969 47 GGVFLVSIHFPPDY------------------PFKPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~Y------------------P~~pP~v~f~ 70 (107)
.|.|.|+-.+|--| |..||.|.|.
T Consensus 151 ~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 151 QGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 48899999999666 5578999886
No 77
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=33.27 E-value=27 Score=24.93 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=21.0
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 187 ~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 187 NGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 489999999999997 469999986
No 78
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=31.23 E-value=27 Score=24.54 Aligned_cols=24 Identities=17% Similarity=0.494 Sum_probs=20.4
Q ss_pred CCEEEEEEEcCCCCC------------------CCCCeEEEe
Q 033969 47 GGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (107)
Q Consensus 47 g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (107)
.|.|.|+-.+|--|| ..||.|.|.
T Consensus 183 dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 489999999998887 468999885
No 79
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=28.79 E-value=1.1e+02 Score=19.18 Aligned_cols=43 Identities=16% Similarity=0.336 Sum_probs=31.4
Q ss_pred CceEE--EEEeCCCCCCCC-CCEEEEEEEcCCCCCCCCCeEEEeccCc
Q 033969 30 MFHWQ--ATIMGPPDSPYA-GGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (107)
Q Consensus 30 ~~~w~--~~i~gp~~t~y~-g~~~~~~i~fp~~YP~~pP~v~f~t~i~ 74 (107)
+.+|. +.+.|+++.... .-.=++.+.+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 47998 899998887554 456678888889887 47766665543
No 80
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=27.62 E-value=11 Score=16.32 Aligned_cols=12 Identities=33% Similarity=0.852 Sum_probs=5.8
Q ss_pred CeEEEeccCccc
Q 033969 65 PKVAFRTKVFHP 76 (107)
Q Consensus 65 P~v~f~t~i~Hp 76 (107)
|.-.|..+.|||
T Consensus 8 penyfserpyhp 19 (26)
T 2jrw_A 8 PENYFSERPYHP 19 (26)
T ss_dssp SSSSCCSSSCCS
T ss_pred chhhcccCCCCC
Confidence 333344555565
No 81
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=27.61 E-value=43 Score=14.41 Aligned_cols=11 Identities=55% Similarity=0.625 Sum_probs=7.3
Q ss_pred HHHHHHHHHHh
Q 033969 3 SKRILKELKDL 13 (107)
Q Consensus 3 ~~RL~~E~~~l 13 (107)
++.+.+|+++-
T Consensus 10 qkkirkelkqr 20 (26)
T 1m46_B 10 QKKIRKELKQR 20 (26)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 46677887653
No 82
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=27.12 E-value=33 Score=15.19 Aligned_cols=12 Identities=25% Similarity=0.617 Sum_probs=7.3
Q ss_pred HHHHHHHHHhhc
Q 033969 4 KRILKELKDLQK 15 (107)
Q Consensus 4 ~RL~~E~~~l~~ 15 (107)
|++.+||-.|..
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 457788877754
No 83
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=26.86 E-value=15 Score=22.86 Aligned_cols=31 Identities=26% Similarity=0.572 Sum_probs=24.3
Q ss_pred CCCCeEEEe---ccCccccccCCCcEeccCCCCc
Q 033969 62 FKPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (107)
Q Consensus 62 ~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~~ 92 (107)
.+||.|.+. +.--|++|..+|..|+++|.++
T Consensus 40 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 40 LEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 378998875 3345889999999999999654
No 84
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=26.62 E-value=1.1e+02 Score=18.56 Aligned_cols=26 Identities=15% Similarity=0.201 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCC
Q 033969 3 SKRILKELKDLQKDPPTSCSAGPVAE 28 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~ 28 (107)
++.|..||.++.+.+.+.+++.....
T Consensus 33 S~~Lid~La~i~~~~~e~fTle~i~s 58 (122)
T 1u9d_A 33 VPTLLNELSSLLSTARNAFTFELINT 58 (122)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEEECCC
T ss_pred hHHHHHHHHHHHCCCcccEEEEEeee
Confidence 46788999999999999888875543
No 85
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=26.16 E-value=50 Score=17.37 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=8.7
Q ss_pred EEEEcCCCCCC
Q 033969 52 VSIHFPPDYPF 62 (107)
Q Consensus 52 ~~i~fp~~YP~ 62 (107)
|+-.+|+|||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 56678999984
No 86
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=24.45 E-value=55 Score=22.64 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=20.7
Q ss_pred CCCEEEEEEEcCCCCCC-------------------CCCeEEEe
Q 033969 46 AGGVFLVSIHFPPDYPF-------------------KPPKVAFR 70 (107)
Q Consensus 46 ~g~~~~~~i~fp~~YP~-------------------~pP~v~f~ 70 (107)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 155 ~~G~y~F~TI~Pg~Yp~p~dgp~G~ll~a~~grh~~RpaHIHf~ 198 (257)
T 3o5u_A 155 EDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIR 198 (257)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHTTTSSCCEECCCEEEE
T ss_pred CCceEEEEEECCCCcCCCCCCchhhhhhhhccCCCCCCceEEEE
Confidence 35899999999999963 67898885
No 87
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=24.02 E-value=56 Score=15.96 Aligned_cols=13 Identities=46% Similarity=0.639 Sum_probs=10.1
Q ss_pred HHHHHHHHHHhhc
Q 033969 3 SKRILKELKDLQK 15 (107)
Q Consensus 3 ~~RL~~E~~~l~~ 15 (107)
.+|+..|++.+.+
T Consensus 30 ~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 30 IKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 5789999988753
No 88
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=23.48 E-value=21 Score=23.12 Aligned_cols=31 Identities=19% Similarity=0.424 Sum_probs=23.9
Q ss_pred CCCCeEEEe---ccCccccccCCCcEeccCCCCc
Q 033969 62 FKPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (107)
Q Consensus 62 ~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~~ 92 (107)
.+||.|.+. +.--|.+|..+|.+|+++|.++
T Consensus 57 ~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 57 LSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp TTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred CCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 478998875 2345889999999999999643
No 89
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=23.15 E-value=37 Score=21.70 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=23.6
Q ss_pred CCCCeEEEe---ccCccccccCCCcEeccCCC
Q 033969 62 FKPPKVAFR---TKVFHPNINSNGSICLDILK 90 (107)
Q Consensus 62 ~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~ 90 (107)
.+||.|.+. +.--|++|..+|.+|+++|.
T Consensus 60 ~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 60 LNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp TTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred CCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 478998875 34568999999999999986
No 90
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=22.79 E-value=50 Score=19.11 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHhhcCCCC
Q 033969 2 ASKRILKELKDLQKDPPT 19 (107)
Q Consensus 2 a~~RL~~E~~~l~~~~~~ 19 (107)
..++|++||+++...+-|
T Consensus 30 tl~~L~~DYr~l~G~~iP 47 (89)
T 3rco_A 30 ALPRLQGEYRSLTGDWIP 47 (89)
T ss_dssp EHHHHHHHHHHHHSSCCC
T ss_pred CHHHHHHHHHHHhCCcCC
Confidence 467899999999877544
No 91
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.75 E-value=81 Score=15.81 Aligned_cols=30 Identities=10% Similarity=0.268 Sum_probs=17.7
Q ss_pred HHHHHHHHHh----hcCCCCCeeEeecCCCCceE
Q 033969 4 KRILKELKDL----QKDPPTSCSAGPVAEDMFHW 33 (107)
Q Consensus 4 ~RL~~E~~~l----~~~~~~~~~~~~~~~n~~~w 33 (107)
++|.+++.++ ...++..+.+...+.....|
T Consensus 18 ~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~~~~w 51 (64)
T 3abf_A 18 RELVRRLTEMASRLLGEPYEEVRVILYEVRRDQW 51 (64)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGE
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHe
Confidence 3455555444 33456677777766665555
No 92
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=22.49 E-value=91 Score=17.07 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhcCCCCCeeEeecCC
Q 033969 3 SKRILKELKDLQKDPPTSCSAGPVAE 28 (107)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~ 28 (107)
-.|+..|++++++....-+++.+..+
T Consensus 33 y~rms~emQrI~r~GGkIvSItp~~~ 58 (67)
T 1b33_N 33 YENWFREQQRIQKMGGKIVKVELATG 58 (67)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred HHHHhHHHHHHHHcCCeEEEEEECCC
Confidence 36899999999998766677776653
No 93
>2qck_A Flavin reductase domain protein; YP_831077.1, flavin reducta domain, structural genomics, joint center for structural GE JCSG; 1.90A {Arthrobacter SP}
Probab=21.93 E-value=24 Score=22.40 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=24.0
Q ss_pred CCCCeEEEe---ccCccccccCCCcEeccCCCCc
Q 033969 62 FKPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (107)
Q Consensus 62 ~~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~~ 92 (107)
.+||.|.+. +.--|++|..+|.+|+++|.++
T Consensus 48 ~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 81 (167)
T 2qck_A 48 AQPPRFTFNMARSSSSWPAIANTTHIGVHMLGLD 81 (167)
T ss_dssp ETTEEEEEEEETTSTTHHHHHHCCEEEEEECBGG
T ss_pred cCCCEEEEEECCCCchHHHHHhCCeEEEEECcHH
Confidence 378988775 3456889999999999999543
No 94
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=21.10 E-value=19 Score=22.45 Aligned_cols=30 Identities=13% Similarity=0.224 Sum_probs=23.4
Q ss_pred CCCeEEEe---ccCccccccCCCcEeccCCCCc
Q 033969 63 KPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (107)
Q Consensus 63 ~pP~v~f~---t~i~Hpnv~~~G~icl~~l~~~ 92 (107)
+||.|.+. +.--|++|..+|..|+++|.++
T Consensus 44 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 76 (158)
T 2r0x_A 44 SPPTLLVCINSNARAYEHFVKNRVLMVNTLTAE 76 (158)
T ss_dssp TTEEEEEEEETTSTTHHHHHHHCEEEEEECBTT
T ss_pred CCCEEEEEeCCCChHHHHHHhCCEEEEEeCCHH
Confidence 68888764 2345889999999999999643
Done!