Query 033973
Match_columns 107
No_of_seqs 200 out of 1206
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 14:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yat_A FK506 binding protein; 100.0 1.6E-28 5.5E-33 152.1 11.1 97 1-107 6-103 (113)
2 2ppn_A FK506-binding protein 1 100.0 1.1E-28 3.7E-33 151.5 9.8 96 2-107 1-97 (107)
3 3kz7_A FK506-binding protein 3 100.0 4.5E-28 1.5E-32 151.3 11.3 98 2-107 5-109 (119)
4 3o5e_A Peptidyl-prolyl CIS-tra 100.0 5.3E-28 1.8E-32 155.8 10.6 96 2-107 36-132 (144)
5 3o5q_A Peptidyl-prolyl CIS-tra 100.0 4.4E-28 1.5E-32 153.3 9.8 96 2-107 20-116 (128)
6 2y78_A Peptidyl-prolyl CIS-tra 100.0 8.2E-28 2.8E-32 153.1 11.0 97 1-107 28-124 (133)
7 2lgo_A FKBP; infectious diseas 99.9 8.6E-28 2.9E-32 152.5 9.0 97 1-107 22-121 (130)
8 1r9h_A FKB-6, FK506 binding pr 99.9 3.4E-27 1.2E-31 150.5 9.7 97 1-107 14-111 (135)
9 4dip_A Peptidyl-prolyl CIS-tra 99.9 6.7E-27 2.3E-31 147.2 10.6 96 2-107 13-112 (125)
10 3b7x_A FK506-binding protein 6 99.9 8.4E-28 2.9E-32 153.2 6.4 98 1-107 26-123 (134)
11 3uf8_A Ubiquitin-like protein 99.9 6.8E-27 2.3E-31 158.7 10.6 96 2-107 105-200 (209)
12 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.9E-26 6.4E-31 157.3 10.3 91 2-107 118-208 (219)
13 2vn1_A 70 kDa peptidylprolyl i 99.9 3.8E-26 1.3E-30 144.5 10.7 95 3-107 18-116 (129)
14 2f4e_A ATFKBP42; FKBP-like, al 99.9 4.2E-26 1.4E-30 151.7 11.4 99 2-107 50-149 (180)
15 1jvw_A Macrophage infectivity 99.9 7.1E-27 2.4E-31 153.8 7.5 94 2-107 38-132 (167)
16 2lkn_A AH receptor-interacting 99.9 1.1E-26 3.6E-31 152.5 7.9 82 2-89 11-96 (165)
17 1u79_A FKBP-type peptidyl-prol 99.9 9.1E-27 3.1E-31 147.4 6.8 101 1-107 12-119 (129)
18 1fd9_A Protein (macrophage inf 99.9 3.6E-26 1.2E-30 155.5 9.5 94 2-107 107-200 (213)
19 2awg_A 38 kDa FK-506 binding p 99.9 1.1E-25 3.7E-30 140.4 10.3 91 3-107 15-107 (118)
20 2jwx_A FKBP38NTD, FK506-bindin 99.9 1.3E-25 4.3E-30 146.5 9.8 92 2-107 43-138 (157)
21 1q6h_A FKBP-type peptidyl-prol 99.9 2.2E-25 7.7E-30 152.5 10.1 93 2-107 122-214 (224)
22 2d9f_A FK506-binding protein 8 99.9 3.8E-25 1.3E-29 141.0 8.6 91 3-107 19-112 (135)
23 1q1c_A FK506-binding protein 4 99.9 1.9E-24 6.4E-29 152.2 11.9 96 2-107 52-148 (280)
24 2pbc_A FK506-binding protein 2 99.9 2E-24 6.8E-29 131.4 8.8 85 13-107 3-87 (102)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 5.4E-24 1.9E-28 157.1 8.3 97 1-107 31-128 (457)
26 3jxv_A 70 kDa peptidyl-prolyl 99.9 5.9E-25 2E-29 159.0 0.0 97 1-107 11-108 (356)
27 2if4_A ATFKBP42; FKBP-like, al 99.9 3E-23 1E-27 148.0 8.2 99 2-107 50-149 (338)
28 3jxv_A 70 kDa peptidyl-prolyl 99.9 1.7E-22 5.8E-27 146.1 11.4 99 2-107 245-344 (356)
29 1q1c_A FK506-binding protein 4 99.8 6.7E-21 2.3E-25 134.1 10.8 92 1-107 168-263 (280)
30 3pr9_A FKBP-type peptidyl-prol 99.8 1.9E-19 6.4E-24 117.3 8.2 73 16-94 2-86 (157)
31 4dt4_A FKBP-type 16 kDa peptid 99.8 2.9E-19 1E-23 117.6 7.3 73 15-93 24-96 (169)
32 1ix5_A FKBP; ppiase, isomerase 99.8 1.6E-19 5.5E-24 116.9 5.2 74 16-94 2-87 (151)
33 2kr7_A FKBP-type peptidyl-prol 99.8 2E-18 6.8E-23 111.8 10.0 74 14-94 5-79 (151)
34 3prb_A FKBP-type peptidyl-prol 99.8 3.2E-18 1.1E-22 117.4 8.9 73 16-94 2-86 (231)
35 2kfw_A FKBP-type peptidyl-prol 99.8 4.2E-18 1.5E-22 114.4 9.2 73 15-94 2-74 (196)
36 2k8i_A SLYD, peptidyl-prolyl C 99.8 5.1E-18 1.8E-22 111.9 8.9 72 16-94 3-74 (171)
37 1p5q_A FKBP52, FK506-binding p 99.7 3.6E-17 1.2E-21 116.3 10.9 91 2-107 26-120 (336)
38 1hxv_A Trigger factor; FKBP fo 99.7 1.4E-17 4.9E-22 103.1 7.2 72 13-93 27-98 (113)
39 3cgm_A SLYD, peptidyl-prolyl C 99.7 1.1E-16 3.6E-21 104.4 7.9 66 16-93 3-68 (158)
40 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 1.3E-13 4.3E-18 101.7 10.5 91 2-107 147-241 (457)
41 1w26_A Trigger factor, TF; cha 99.4 3E-13 1E-17 100.0 8.2 73 13-94 155-227 (432)
42 1t11_A Trigger factor, TF; hel 99.3 4.1E-12 1.4E-16 92.9 5.0 72 13-93 158-229 (392)
43 3gty_X Trigger factor, TF; cha 98.1 4.3E-06 1.5E-10 61.8 5.5 56 15-80 154-209 (433)
44 3htx_A HEN1; HEN1, small RNA m 69.0 18 0.00063 29.4 7.1 60 16-80 561-649 (950)
45 3bmb_A Regulator of nucleoside 44.0 20 0.00068 21.8 2.9 25 59-83 90-114 (136)
46 2f23_A Anti-cleavage anti-GREA 41.0 26 0.00089 21.8 3.1 24 60-83 122-145 (156)
47 2lj4_A Peptidyl-prolyl CIS-tra 38.9 17 0.00056 21.5 1.9 23 55-77 78-100 (115)
48 2lkt_A Retinoic acid receptor 36.7 65 0.0022 18.9 4.4 24 14-40 6-35 (125)
49 2pn0_A Prokaryotic transcripti 36.3 20 0.00068 22.0 2.0 24 60-83 94-117 (141)
50 3tb5_A Methionine aminopeptida 33.9 1E+02 0.0035 20.3 6.2 52 14-76 83-143 (264)
51 2rqs_A Parvulin-like peptidyl- 33.3 29 0.001 19.5 2.3 23 55-77 60-82 (97)
52 2p4v_A Transcription elongatio 33.2 28 0.00096 21.8 2.3 26 58-83 119-144 (158)
53 2pv1_A Chaperone SURA; surviVa 29.5 42 0.0014 18.9 2.5 23 55-77 64-86 (103)
54 1xgs_A Methionine aminopeptida 28.8 1.4E+02 0.0047 20.3 5.5 51 14-75 71-127 (295)
55 3gpk_A PPIC-type peptidyl-prol 28.5 29 0.001 20.3 1.7 23 55-77 65-87 (112)
56 1jns_A Peptidyl-prolyl CIS-tra 27.4 33 0.0011 19.0 1.8 22 56-77 54-75 (92)
57 3lvj_C Sulfurtransferase TUSA; 26.3 75 0.0026 17.3 3.1 29 57-85 17-49 (82)
58 1zk6_A Foldase protein PRSA; a 26.3 32 0.0011 19.0 1.6 22 56-77 56-77 (93)
59 1grj_A GREA protein; transcrip 25.9 25 0.00084 22.0 1.1 24 59-82 122-145 (158)
60 2jzv_A Foldase protein PRSA; p 24.7 37 0.0012 19.5 1.7 23 55-77 74-96 (111)
61 4g2p_A Chaperone SURA; structu 23.8 30 0.001 20.1 1.1 23 55-77 69-91 (110)
62 2p5d_A UPF0310 protein mjecl36 23.6 46 0.0016 20.5 2.0 22 61-83 29-50 (147)
63 3ui4_A Peptidyl-prolyl CIS-tra 23.1 41 0.0014 19.2 1.6 21 56-76 57-77 (101)
64 1je3_A EC005, hypothetical 8.6 22.6 86 0.003 17.8 3.0 23 62-84 43-65 (97)
65 1jdq_A TM006 protein, hypothet 22.4 96 0.0033 17.6 3.2 22 63-84 43-64 (98)
66 1o65_A Hypothetical protein YI 22.0 33 0.0011 23.2 1.2 22 2-26 155-176 (246)
67 3tc5_A Peptidyl-prolyl CIS-tra 21.6 37 0.0013 21.4 1.3 23 54-76 128-150 (166)
68 1yw5_A Peptidyl prolyl CIS/tra 21.3 50 0.0017 20.8 1.9 23 55-77 140-162 (177)
69 2hd9_A UPF0310 protein PH1033; 21.2 69 0.0023 19.7 2.5 20 64-83 29-48 (145)
70 1j6y_A Peptidyl-prolyl CIS-tra 20.3 42 0.0014 20.4 1.4 23 55-77 102-124 (139)
71 3i6c_A Peptidyl-prolyl CIS-tra 20.3 36 0.0012 20.3 1.0 22 55-76 86-107 (123)
No 1
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.96 E-value=1.6e-28 Score=152.15 Aligned_cols=97 Identities=41% Similarity=0.667 Sum_probs=90.6
Q ss_pred CCeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEE
Q 033973 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ 79 (107)
+|++|+++++|+|.. ++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|+++++.
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ 81 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLENG---QKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT 81 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 589999999999998 999999999999998777 9999998743 59999999999999999999999999999999
Q ss_pred ECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 80 ITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 80 ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|||++| ||+.+.+ +. ||||++|
T Consensus 82 ip~~~a--yG~~~~~---~~-Ip~~~~l 103 (113)
T 1yat_A 82 IPGPYA--YGPRGFP---GL-IPPNSTL 103 (113)
T ss_dssp ECGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred ECHHHC--cCCCCCC---CC-cCCCCeE
Confidence 999999 9999987 76 9999985
No 2
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.96 E-value=1.1e-28 Score=151.48 Aligned_cols=96 Identities=38% Similarity=0.720 Sum_probs=89.6
Q ss_pred CeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|.. ++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i 76 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG---KKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence 79999999999988 999999999999998877 9999998533 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+.+.+ +. ||||++|
T Consensus 77 p~~~a--yG~~~~~---~~-Ip~~~~l 97 (107)
T 2ppn_A 77 SPDYA--YGATGHP---GI-IPPHATL 97 (107)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred CHHHc--cCCCCCC---CC-cCCCCeE
Confidence 99999 9999987 66 9999985
No 3
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.95 E-value=4.5e-28 Score=151.29 Aligned_cols=98 Identities=31% Similarity=0.504 Sum_probs=89.2
Q ss_pred CeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCC------CCccEEEEeCCCCCcccHHHHhcCCCCCc
Q 033973 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------GQQPFTFQIGKGSVIKGWDEGVMGMQVGE 74 (107)
Q Consensus 2 Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~------~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge 74 (107)
||+++++++|+|.. |+.||.|.+||++++.|| ++|++++.. ...|+.|.+|.+++++||+++|.+|++|+
T Consensus 5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDG---TVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp SEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS---CEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred ccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCC---CEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 79999999999965 999999999999998787 999999852 12699999999999999999999999999
Q ss_pred EEEEEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 75 VARLRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 75 ~~~v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
+++|.|||++| ||++|.+ +..||||++|
T Consensus 82 ~~~v~ip~~~a--YG~~g~~---~~~Ip~~~~l 109 (119)
T 3kz7_A 82 KARLEIEPEWA--YGKKGQP---DAKIPPNTKL 109 (119)
T ss_dssp EEEEEECGGGT--TCTTCBG---GGTBCTTCCE
T ss_pred EEEEEECcHHh--cCCCCCC---CCccCcCCeE
Confidence 99999999999 9999987 5449999986
No 4
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.95 E-value=5.3e-28 Score=155.80 Aligned_cols=96 Identities=39% Similarity=0.632 Sum_probs=89.9
Q ss_pred CeEEEEecccCCC-CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|. .|+.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++|+|
T Consensus 36 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 111 (144)
T 3o5e_A 36 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 111 (144)
T ss_dssp SEEEEEEECCBSSCCCCTTCEEEEEEEEECTTS---CEEEESGGGT-SCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred eEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEeecccC-CCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEE
Confidence 7999999999998 5999999999999998888 9999998744 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||++|.+ +. ||||++|
T Consensus 112 pp~~a--YG~~g~~---~~-Ipp~~~L 132 (144)
T 3o5e_A 112 KPEYA--YGSAGSL---PK-IPSNATL 132 (144)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred ChHHC--cCCCCCC---CC-cCCCCeE
Confidence 99999 9999997 66 9999986
No 5
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.95 E-value=4.4e-28 Score=153.33 Aligned_cols=96 Identities=39% Similarity=0.632 Sum_probs=89.4
Q ss_pred CeEEEEecccCCC-CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|. .|+.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 20 gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 20 GVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEEEECCCCCccCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 7999999999997 4999999999999999888 9999997643 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||++|.+ +. ||||++|
T Consensus 96 p~~~a--YG~~g~~---~~-Ip~~~~l 116 (128)
T 3o5q_A 96 KPEYA--YGSAGSL---PK-IPSNATL 116 (128)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred ChHHc--CCCCCCC---CC-cCCCCEE
Confidence 99999 9999997 66 9999986
No 6
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.95 E-value=8.2e-28 Score=153.12 Aligned_cols=97 Identities=45% Similarity=0.738 Sum_probs=90.4
Q ss_pred CCeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
.||+|+++++|+|..++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++||+++|.|
T Consensus 28 ~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~i 103 (133)
T 2y78_A 28 SGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTI 103 (133)
T ss_dssp TSCEEEEEECCSSCBCCTTSEEEEEEEEEETTS---CEEEETTTTT-CCEEEETTSSSSCHHHHHHSTTCBTTCEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEeccCcCC-CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEE
Confidence 389999999999999999999999999998777 9999998644 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+++.+ +. ||||++|
T Consensus 104 p~~~a--YG~~~~~---~~-Ipp~~~l 124 (133)
T 2y78_A 104 PPQLG--YGARGAG---GV-IPPNATL 124 (133)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred CcHHh--CCCCCCC---CC-CCCCCeE
Confidence 99999 9999987 65 9999985
No 7
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.95 E-value=8.6e-28 Score=152.47 Aligned_cols=97 Identities=40% Similarity=0.724 Sum_probs=89.9
Q ss_pred CCeEEE--EecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEE
Q 033973 1 MGIEKQ--ILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 1 ~Gl~~~--~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
+|++|+ ++++|+|.. ++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 22 ~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 22 MSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG---KQFDSSRSRG-KPFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTS---CEEECTTTTT-CCEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred CceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCC---CEEEccCcCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 478888 999999998 999999999999998777 9999998744 599999999999999999999999999999
Q ss_pred EEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 78 LRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 78 v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|.|||++| ||+.+.+ +. ||||++|
T Consensus 98 v~ip~~~a--YG~~~~~---~~-Ip~~~~l 121 (130)
T 2lgo_A 98 FTIPYQLA--YGERGYP---PV-IPPKATL 121 (130)
T ss_dssp EEECTTTS--TTTTCCS---TT-SCSSCCE
T ss_pred EEECcHHH--CCCCCCC---CC-cCCCCeE
Confidence 99999999 9999987 76 9999985
No 8
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.94 E-value=3.4e-27 Score=150.51 Aligned_cols=97 Identities=39% Similarity=0.615 Sum_probs=89.3
Q ss_pred CCeEEEEecccCCC-CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEE
Q 033973 1 MGIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ 79 (107)
.||+|+++++|+|. .++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++|.
T Consensus 14 ~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ 89 (135)
T 1r9h_A 14 GGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG---TKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT 89 (135)
T ss_dssp SSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCBTCEEEEE
T ss_pred CcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCC---CEEEecCcCC-CCEEEEeCCCCccHHHHHHHhcCCCCCEEEEE
Confidence 38999999999997 5999999999999998777 9999998533 59999999999999999999999999999999
Q ss_pred ECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 80 ITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 80 ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|||++| ||+.|.+ +. ||||++|
T Consensus 90 ip~~~a--YG~~g~~---~~-Ip~~~~l 111 (135)
T 1r9h_A 90 IRSDYG--YGDAGSP---PK-IPGGATL 111 (135)
T ss_dssp ECGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred EChHHc--CCCCCCC---CC-cCcCCcE
Confidence 999999 9999987 66 9999985
No 9
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.94 E-value=6.7e-27 Score=147.19 Aligned_cols=96 Identities=31% Similarity=0.498 Sum_probs=87.4
Q ss_pred CeEEEEecccC--CCCCCCCCEEEEEEEEEEe-CCCceeEEecccCC-CCccEEEEeCCCCCcccHHHHhcCCCCCcEEE
Q 033973 2 GIEKQILTPGN--GPKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 2 Gl~~~~~~~G~--g~~~~~gd~V~v~y~~~~~-~gg~~~~~~st~~~-~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
|++|+++++|+ |..++.||.|.+||++++. || ++|+++++. ..+|+.|.+|.+++++||+++|.+|++|++++
T Consensus 13 gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG---~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~ 89 (125)
T 4dip_A 13 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG---SLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRK 89 (125)
T ss_dssp CCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTC---CEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEEE
T ss_pred CeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCC---cEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEEE
Confidence 78999999998 7789999999999999998 67 999999731 12699999999999999999999999999999
Q ss_pred EEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 78 LRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 78 v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|.|||++| ||+.+.+ .|||||+|
T Consensus 90 ~~ip~~~a--YG~~g~~-----~Ip~~~~l 112 (125)
T 4dip_A 90 LIIPPALG--YGKEGKG-----KIPPESTL 112 (125)
T ss_dssp EEECGGGT--TTTTCBT-----TBCTTCCE
T ss_pred EEEChHHh--cCCCCCC-----CCCCCCeE
Confidence 99999999 9999975 49999986
No 10
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.94 E-value=8.4e-28 Score=153.18 Aligned_cols=98 Identities=22% Similarity=0.349 Sum_probs=84.1
Q ss_pred CCeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
.||+|+++++|+|..++.||.|.+||++++.++| ++|++++.++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 26 ~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G--~~fdss~~~~-~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~i 102 (134)
T 3b7x_A 26 RGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMD--RPFDSNYFRK-TPRLMKLGEDITLWGMELGLLSMRRGELARFLF 102 (134)
T ss_dssp SSEEEEEEECCEEEECCTTCEEEEEEEEECTTCS--SCSEEC--------CEEC-CCCCCHHHHHHHHTCEETCEEEEEE
T ss_pred CCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCC--eEEEecCCCC-CCEEEEcCCcchhHHHHHHHhCCCCCCEEEEEE
Confidence 4899999999999999999999999999987433 9999998643 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+.+.+ +. ||||++|
T Consensus 103 p~~~a--YG~~~~~---~~-Ip~~~~l 123 (134)
T 3b7x_A 103 KPNYA--YGTLGCP---PL-IPPNTTV 123 (134)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred CHHHC--cCCCCCC---CC-cCcCCeE
Confidence 99999 9999998 76 9999985
No 11
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.94 E-value=6.8e-27 Score=158.71 Aligned_cols=96 Identities=46% Similarity=0.748 Sum_probs=90.8
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEEC
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRIT 81 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip 81 (107)
|++|+++++|+|..++.||.|.+||++++.|| ++|+++++++ .|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 105 Gl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~~-~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~Ip 180 (209)
T 3uf8_A 105 GLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG---QKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIP 180 (209)
T ss_dssp SCEEEEEECCCSCBCCTTCEEEEEEEEEETTS---CEEEESGGGT-CCEEEETTSSSSCHHHHHHHTTCBTTCEEEEEEC
T ss_pred ceEEEEEEcCCCCcCCCCCEEEEEEEEEECCC---CEEEEccccC-CCEEEEeCCCccchhHHHHHhCCCCCCEEEEEEC
Confidence 89999999999999999999999999999887 9999998744 6999999999999999999999999999999999
Q ss_pred CchhhccccCCCCCCCCccCCCCCCC
Q 033973 82 PMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 82 ~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|++| ||++|.+ +. ||||++|
T Consensus 181 p~~a--YG~~g~~---~~-IP~~s~L 200 (209)
T 3uf8_A 181 PQLG--YGARGAA---GV-IPPNATL 200 (209)
T ss_dssp GGGT--TTTTCBT---TT-BCTTCCE
T ss_pred cHHh--CCCCCCC---CC-cCCCCeE
Confidence 9999 9999998 76 9999986
No 12
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.94 E-value=1.9e-26 Score=157.28 Aligned_cols=91 Identities=33% Similarity=0.470 Sum_probs=86.0
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEEC
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRIT 81 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip 81 (107)
||+|+++++|+|..|+.||.|.+||++++.|| ++||++ . .|+.|.+| ++|+||+++|.+|++|++++|+||
T Consensus 118 Gl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG---~vfDss-~---~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 118 GILMTELTPGTGPKPDANGRVEVRYVGRLPDG---KIFDQS-T---QPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp GCEEEEEECCCSCCCCTTSEEEEEEEEECTTS---CEEEEC-S---SCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CeEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEeecc-C---CcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 89999999999999999999999999999888 999998 3 69999996 899999999999999999999999
Q ss_pred CchhhccccCCCCCCCCccCCCCCCC
Q 033973 82 PMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 82 ~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|++| ||++|.+ +. ||||++|
T Consensus 189 p~lA--YG~~g~~---~~-IPpnstL 208 (219)
T 3oe2_A 189 SDQA--YGAEGAG---DL-IDPFTPL 208 (219)
T ss_dssp GGGT--TTTTCBT---TT-BCTTCCE
T ss_pred chhc--CCCCCCC---CC-CCCCCeE
Confidence 9999 9999998 65 9999986
No 13
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.94 E-value=3.8e-26 Score=144.47 Aligned_cols=95 Identities=35% Similarity=0.505 Sum_probs=85.3
Q ss_pred eEEEEeccc---CCCCCCCCCEEEEEEEEEE-eCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEE
Q 033973 3 IEKQILTPG---NGPKPVAGQKVTVHCTGYG-KNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (107)
Q Consensus 3 l~~~~~~~G---~g~~~~~gd~V~v~y~~~~-~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v 78 (107)
++++++++| +|..++.||.|.+||++++ .|| ++|+++++++ .|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 18 ~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG---~~fd~s~~~~-~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v 93 (129)
T 2vn1_A 18 VIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTG---KVFDSSFDRN-VPFKFHLEQGEVIKGWDICVSSMRKNEKCLV 93 (129)
T ss_dssp EEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTC---CEEEEGGGTT-CCEEEETTSSSSCHHHHHHHTTCCTTCEEEE
T ss_pred EEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCC---eEEEecCCCC-ccEEEEeCCCCcCHHHHHHHhCCCCCCEEEE
Confidence 456788965 5677999999999999998 677 9999998643 5999999999999999999999999999999
Q ss_pred EECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 79 RITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 79 ~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
.|||++| ||+.+.+ +. ||||++|
T Consensus 94 ~ip~~~a--YG~~~~~---~~-Ip~~~~l 116 (129)
T 2vn1_A 94 RIESMYG--YGDEGCG---ES-IPGNSVL 116 (129)
T ss_dssp EECGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred EEChHHc--CCCCCCC---CC-cCCCCeE
Confidence 9999999 9999987 66 9999985
No 14
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.94 E-value=4.2e-26 Score=151.72 Aligned_cols=99 Identities=25% Similarity=0.316 Sum_probs=88.6
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCC-CCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~-~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|..++.||.|.+||++++.++| ++|++++..+ .|+.|.+|.+ ++++||+++|.+|++|++++|.|
T Consensus 50 gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG--~~fdss~~~~-~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~i 126 (180)
T 2f4e_A 50 KVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVHV 126 (180)
T ss_dssp TEEEEEEECCBSCCBCTTCEEEEEEEEEETTTC--CEEEETTTTT-CCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEEE
T ss_pred ceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCC--cEEeccCccC-CCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999999999999999999999987533 9999998744 6999999998 99999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||..+.+. .+. ||||++|
T Consensus 127 Pp~~a--YG~~g~~~-~~~-Ip~~s~l 149 (180)
T 2f4e_A 127 GWELA--YGKEGNFS-FPN-VPPMADL 149 (180)
T ss_dssp CGGGT--TTTTCBSS-SSC-BCTTCCE
T ss_pred CchHh--CCcCCccc-CCC-cCCCCeE
Confidence 99999 99998720 034 9999985
No 15
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.94 E-value=7.1e-27 Score=153.83 Aligned_cols=94 Identities=32% Similarity=0.452 Sum_probs=87.5
Q ss_pred CeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|.. |+.||.|.+||++++.|| ++|++++.++ .|+.|.+ +++|+||+++|.+|++|++++|+|
T Consensus 38 Gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG---~~fdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~I 111 (167)
T 1jvw_A 38 GLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG---TVFDSSRERG-KPTTFRP--NEVIKGWTEALQLMREGDRWRLFI 111 (167)
T ss_dssp SCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS---CEEEEHHHHT-SCEEECG--GGSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEe--CchhHHHHHHHcCCCCCCEEEEEE
Confidence 89999999999998 999999999999998788 9999998643 5999999 589999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+.|.+ +. ||||++|
T Consensus 112 p~~la--YG~~g~~---~~-Ipp~s~L 132 (167)
T 1jvw_A 112 PYDLA--YGVTGGG---GM-IPPYSPL 132 (167)
T ss_dssp CGGGT--TTTTCSS---SS-SCTTCCE
T ss_pred Cchhh--CCCCCCC---CC-cCCCCeE
Confidence 99999 9999987 66 9999986
No 16
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=152.51 Aligned_cols=82 Identities=26% Similarity=0.417 Sum_probs=77.0
Q ss_pred CeEEEEecccCCCC--CCCCCEEEEEEEEEEeC--CCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEE
Q 033973 2 GIEKQILTPGNGPK--PVAGQKVTVHCTGYGKN--GDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 2 Gl~~~~~~~G~g~~--~~~gd~V~v~y~~~~~~--gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
||+|+++++|+|.. ++.||.|++||++++.| | ++||||++++ +|+.|.+|.+++|+||+++|.+|++||+++
T Consensus 11 Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G---~~FDsS~~rg-~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~ 86 (165)
T 2lkn_A 11 GIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEG---TVLDDSRARG-KPMELIIGKKFKLPVWETIVCTMREGEIAQ 86 (165)
T ss_dssp SCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSC---CEEEESTTTT-CCEEEESSSSCSCSHHHHHHTTCCTTCEEE
T ss_pred CeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCc---cEEEecccCC-CCEEEEecCCCccHHHHHHHhcCccCceEE
Confidence 89999999999976 46899999999999865 5 9999999976 699999999999999999999999999999
Q ss_pred EEECCchhhccc
Q 033973 78 LRITPMVLVDFH 89 (107)
Q Consensus 78 v~ip~~~a~~yG 89 (107)
|+|||++| ||
T Consensus 87 ~~ipp~la--YG 96 (165)
T 2lkn_A 87 FLCDIKHV--VL 96 (165)
T ss_dssp EECCHHHH--SS
T ss_pred EEECHHHh--cC
Confidence 99999999 99
No 17
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.93 E-value=9.1e-27 Score=147.45 Aligned_cols=101 Identities=37% Similarity=0.612 Sum_probs=88.4
Q ss_pred CCeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcC------CCCCc
Q 033973 1 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMG------MQVGE 74 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~------m~~Ge 74 (107)
.||+|+++++|+|..++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+ |++|+
T Consensus 12 ~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 12 SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG---KVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp TSCEEEEEECCSSCBCCTTCEEEEEEEEECTTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred CCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 489999999999999999999999999998777 9999998533 5999999999999999999998 99999
Q ss_pred EEEEEECCchhhccccCCCCC-CCCccCCCCCCC
Q 033973 75 VARLRITPMVLVDFHNGGFNL-TQSWILRYKSCR 107 (107)
Q Consensus 75 ~~~v~ip~~~a~~yG~~g~~~-~~~~~ipp~s~l 107 (107)
++++.|||++| ||+++.++ ..+..||||++|
T Consensus 88 ~~~v~ip~~~a--YG~~~~~~~~~~~~Ip~~~~l 119 (129)
T 1u79_A 88 KRTLRIPPELA--YGDRGAGCKGGSCLIPPASVL 119 (129)
T ss_dssp EEEEEECGGGT--TGGGCEEEETTEEEECTTCCE
T ss_pred EEEEEEChHHc--cCCCCCCccccCCcCCCCCeE
Confidence 99999999999 99988620 001139999985
No 18
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.93 E-value=3.6e-26 Score=155.50 Aligned_cols=94 Identities=29% Similarity=0.456 Sum_probs=87.5
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEEC
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRIT 81 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip 81 (107)
||+|+++++|+|..|+.||.|.+||++++.|| ++||+++.++ .|+.|.+ +++|+||+++|.+|++|++++|+||
T Consensus 107 Gl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 180 (213)
T 1fd9_A 107 GLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG---TVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPAGSTWEIYVP 180 (213)
T ss_dssp SCEEEEEECCCSCCCCTTCEEEEEEEEEETTS---CEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred ccEEEEEecCCCccCCCCCEEEEEEEEEECCC---CEEeeccccC-CCEEEEc--CchhhHHHHHHcCCCCCCEEEEEEC
Confidence 89999999999999999999999999999888 9999998644 5999999 5899999999999999999999999
Q ss_pred CchhhccccCCCCCCCCccCCCCCCC
Q 033973 82 PMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 82 ~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|+++ ||+.|.+ +. ||||++|
T Consensus 181 ~~la--YG~~g~~---~~-Ipp~stL 200 (213)
T 1fd9_A 181 SGLA--YGPRSVG---GP-IGPNETL 200 (213)
T ss_dssp GGGT--TTTCCCS---SS-CCTTCCE
T ss_pred chhc--cCccCCC---CC-CCCCCeE
Confidence 9999 9999987 65 9999986
No 19
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.93 E-value=1.1e-25 Score=140.44 Aligned_cols=91 Identities=29% Similarity=0.407 Sum_probs=84.9
Q ss_pred eEEEEecccCCC--CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 3 l~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
++|+++++|+|. .++.||.|.+||++++.|| ++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|
T Consensus 15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG---~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i 86 (118)
T 2awg_A 15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 86 (118)
T ss_dssp EEEEEEECCCTTCCCCCTTSEEEEEEEEECTTS---CEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEECC-----CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 6999999999999998777 899973 599999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+.+.+ +. ||||++|
T Consensus 87 p~~~a--yG~~~~~---~~-Ip~~~~l 107 (118)
T 2awg_A 87 DSKYC--YGPQGRS---PY-IPPHAAL 107 (118)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred ChHHc--cCCCCCC---Cc-cCCCCeE
Confidence 99999 9999987 66 9999985
No 20
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=146.53 Aligned_cols=92 Identities=29% Similarity=0.427 Sum_probs=84.8
Q ss_pred Ce-EEEEecccCCC--CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEE
Q 033973 2 GI-EKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARL 78 (107)
Q Consensus 2 Gl-~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v 78 (107)
|+ +|+++++|+|. .++.||.|.+||++++.|| ++||++ +|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 43 G~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG---~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v 114 (157)
T 2jwx_A 43 GLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMV 114 (157)
T ss_dssp SSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTS---CEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCTTCEEEE
T ss_pred CCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCC---CEeecC-----CCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 54 89999999997 7999999999999998787 999983 5999999999999999999999999999999
Q ss_pred EECCchhhccccCC-CCCCCCccCCCCCCC
Q 033973 79 RITPMVLVDFHNGG-FNLTQSWILRYKSCR 107 (107)
Q Consensus 79 ~ip~~~a~~yG~~g-~~~~~~~~ipp~s~l 107 (107)
+||+++| ||+++ .+ +. ||||++|
T Consensus 115 ~IP~~~a--YG~~g~~~---~~-IPp~stL 138 (157)
T 2jwx_A 115 TADSKYC--YGPQGSRS---PY-IPPHAAL 138 (157)
T ss_dssp EECGGGT--TTTTCCSS---SC-CCTTCCE
T ss_pred EECchhc--CCcccccC---CC-cCCCCeE
Confidence 9999999 99999 65 55 9999986
No 21
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.93 E-value=2.2e-25 Score=152.54 Aligned_cols=93 Identities=27% Similarity=0.530 Sum_probs=86.8
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEEC
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRIT 81 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip 81 (107)
||+|+++++|+|..|+.||.|.+||++++.|| ++||+++.++ .|+.|.+ +++|+||+++|.+|++|++++|+||
T Consensus 122 Gl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG---~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 122 GLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG---KEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp SCEEEEEECCSSCCCCTTCEEEEEEEEEETTS---CEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred ceEEEEEecccCccccCCCEEEEEEEEEeCCC---CEEeeccccC-CCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence 89999999999999999999999999998888 9999998754 5999999 5899999999999999999999999
Q ss_pred CchhhccccCCCCCCCCccCCCCCCC
Q 033973 82 PMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 82 ~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|+++ ||+.+.+ .||||++|
T Consensus 196 ~~la--YG~~g~~-----~IPp~stL 214 (224)
T 1q6h_A 196 PELA--YGKAGVP-----GIPPNSTL 214 (224)
T ss_dssp GGGT--TTTTCBT-----TBCTTCCE
T ss_pred chhh--cCcCCCC-----CCCCCCEE
Confidence 9999 9999986 39999985
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=3.8e-25 Score=141.03 Aligned_cols=91 Identities=29% Similarity=0.407 Sum_probs=84.3
Q ss_pred eEEEEecccCCC--CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 3 IEKQILTPGNGP--KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 3 l~~~~~~~G~g~--~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
|+|+++++|+|. .++.||.|.+||++++.|| ++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG---~~fds~-----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~i 90 (135)
T 2d9f_A 19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG---TRVQEE-----PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 90 (135)
T ss_dssp SEEEEEECCCSSCCCCCTTSEEEEEEEEEESSS---CEEEEE-----EEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC---CEEecC-----CCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 899999999997 7999999999999998777 899972 599999999999999999999999999999999
Q ss_pred CCchhhccccCC-CCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGG-FNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g-~~~~~~~~ipp~s~l 107 (107)
||++| ||+.+ .+ +. ||||++|
T Consensus 91 p~~~a--YG~~~~~~---~~-Ip~~~~l 112 (135)
T 2d9f_A 91 DSKYC--YGPQGSRS---PY-IPPHAAL 112 (135)
T ss_dssp CHHHH--TCTTCCSS---SC-CCTTCCE
T ss_pred ChhHc--cCcCCcCC---Cc-cCCCCeE
Confidence 99999 99999 65 55 9999985
No 23
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.92 E-value=1.9e-24 Score=152.23 Aligned_cols=96 Identities=35% Similarity=0.609 Sum_probs=89.9
Q ss_pred CeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+|+++++|+|.. ++.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 52 gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~i 127 (280)
T 1q1c_A 52 GVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG---TKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKVGEVCHITC 127 (280)
T ss_dssp SEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS---CEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred ceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCC---CEEEecccCC-CCEEEEECCcChhHHHHHHHhcCCCCCEEEEEE
Confidence 89999999999988 999999999999998777 9999998643 699999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+.|.+ +. ||||++|
T Consensus 128 pp~~a--YG~~g~~---~~-Ip~~~~l 148 (280)
T 1q1c_A 128 KPEYA--YGSAGSP---PK-IPPNATL 148 (280)
T ss_dssp CGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred CcHHh--CCCcCcc---CC-CCCCCcE
Confidence 99999 9999987 65 9999975
No 24
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=131.42 Aligned_cols=85 Identities=33% Similarity=0.535 Sum_probs=78.0
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCC
Q 033973 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGG 92 (107)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g 92 (107)
|..++.||.|++||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|+++++.|||++| ||+.+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG---~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~a--yG~~~ 76 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDG---TEFDSSLPQN-QPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELG--YGERG 76 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTS---CEEEESTTTT-CCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGT--TTTTC
T ss_pred CCcCCCCCEEEEEEEEEECCC---CEEEeCCCCC-CCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHC--cCCCC
Confidence 566999999999999998777 9999998643 69999999999999999999999999999999999999 99999
Q ss_pred CCCCCCccCCCCCCC
Q 033973 93 FNLTQSWILRYKSCR 107 (107)
Q Consensus 93 ~~~~~~~~ipp~s~l 107 (107)
.+ +. ||||++|
T Consensus 77 ~~---~~-Ip~~~~l 87 (102)
T 2pbc_A 77 AP---PK-IPGGATL 87 (102)
T ss_dssp BT---TT-BCTTCCE
T ss_pred CC---CC-cCcCCeE
Confidence 87 65 9999985
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.90 E-value=5.4e-24 Score=157.13 Aligned_cols=97 Identities=38% Similarity=0.623 Sum_probs=73.3
Q ss_pred CCeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEE
Q 033973 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ 79 (107)
.||+|+++++|+|.. ++.||.|.+||++++.|| ++|++|+.++ .|+.|.+|.+.+++||+++|.+|++|++++|+
T Consensus 31 ~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g---~~~dss~~~~-~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~ 106 (457)
T 1kt0_A 31 RGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKRGEICHLL 106 (457)
T ss_dssp --CEEEC--------CCCBTCEEEEEEEEEC--------CBC-------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEE
T ss_pred CcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCC---CEEeccCCCC-CCeEEEeCCcchhhHHHHHHhhCCCCCEEEEE
Confidence 389999999999998 999999999999998777 9999998754 59999999999999999999999999999999
Q ss_pred ECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 80 ITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 80 ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|||+++ ||..|.+ +. ||||++|
T Consensus 107 i~~~~~--yg~~g~~---~~-i~~~~~l 128 (457)
T 1kt0_A 107 CKPEYA--YGSAGSL---PK-IPSNATL 128 (457)
T ss_dssp ECGGGT--TTTTCBT---TT-BCTTCCE
T ss_pred EChHHh--ccccCCC---CC-CCCCCcE
Confidence 999999 9999997 76 9999975
No 26
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.89 E-value=5.9e-25 Score=158.96 Aligned_cols=97 Identities=36% Similarity=0.669 Sum_probs=0.0
Q ss_pred CCeEEEEecccCC-CCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEE
Q 033973 1 MGIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLR 79 (107)
Q Consensus 1 ~Gl~~~~~~~G~g-~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ 79 (107)
.||+|+++++|+| ..|+.||.|.+||++++.|| ++|+++++++ +|+.|.+|.+++++||+++|.+|++|++++++
T Consensus 11 ~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG---~~fdss~~~~-~p~~~~lG~g~~i~g~e~~l~gm~~Ge~~~~~ 86 (356)
T 3jxv_A 11 QGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDRD-DTFKFKLGQGQVIKGWDQGIKTMKKGENALFT 86 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEEEEEEeecCCccCCCCCEEEEEEEEEECCC---CEEEEcccCC-CcEEEEeCCCccchHHHHHHhcCCCCCEEEEE
Confidence 4899999999999 45999999999999999888 9999999754 59999999999999999999999999999999
Q ss_pred ECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 80 ITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 80 ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|||++| ||++|.+ +. ||||++|
T Consensus 87 ip~~~a--YG~~g~~---~~-Ip~~~~l 108 (356)
T 3jxv_A 87 IPPELA--YGESGSP---PT-IPANATL 108 (356)
T ss_dssp ----------------------------
T ss_pred EChHHh--CCCCCCC---CC-cCCCCEE
Confidence 999999 9999998 76 9999986
No 27
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.89 E-value=3e-23 Score=147.98 Aligned_cols=99 Identities=25% Similarity=0.316 Sum_probs=87.9
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCC-CCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG-SVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~-~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
||+++++++|+|..|+.||.|+|||++++.++| ++|++++..+ .|+.|.+|.+ ++|+||+++|.+|++||+++|.|
T Consensus 50 ~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g--~~fd~~~~~~-~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i 126 (338)
T 2if4_A 50 KVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQ--HKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKSGERALVHV 126 (338)
T ss_dssp TEEEEEEECCBSCCCCTTCEEEEEEEEEETTTC--CCCEEHHHHT-CCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEEE
T ss_pred CeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCC--cEeecccCCC-CCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEEE
Confidence 799999999999999999999999999997634 9999997643 5999999998 89999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||+++ ||..|... .+. ||++++|
T Consensus 127 ~~~~~--yg~~~~~~-~~~-ip~~~~l 149 (338)
T 2if4_A 127 GWELA--YGKEGNFS-FPN-VPPMADL 149 (338)
T ss_dssp CGGGS--SCSSCCCS-SSC-CCTTCCE
T ss_pred CHHHh--cCCCCCCC-CCC-CCCCCcE
Confidence 99999 99998720 033 9999874
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.88 E-value=1.7e-22 Score=146.09 Aligned_cols=99 Identities=31% Similarity=0.473 Sum_probs=87.0
Q ss_pred CeEEEEecccCC-CCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 2 GIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 2 Gl~~~~~~~G~g-~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
+++++++++|+| ..++.||.|++||++++.|| ++|+++.....+|+.|.+|.+++|+||+++|.+|++||+++|+|
T Consensus 245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG---~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~i 321 (356)
T 3jxv_A 245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQDG---TVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTI 321 (356)
T ss_dssp CEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS---CEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEE
T ss_pred ceeEEeeecccccCCCCCCCEEEEEEEEEECCC---CEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEE
Confidence 689999999999 56999999999999999888 99998853234699999999999999999999999999999999
Q ss_pred CCchhhccccCCCCCCCCccCCCCCCC
Q 033973 81 TPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 81 p~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
||++| ||+++... .+ .||||++|
T Consensus 322 p~~~a--YG~~~~~~-~~-~Ip~~~~l 344 (356)
T 3jxv_A 322 PPEYA--YGSTESKQ-DA-IVPPNSTV 344 (356)
T ss_dssp CGGGT--TTTSCEES-SS-EECTTCCE
T ss_pred ChHHc--cCCCCcCC-CC-cCCcCCeE
Confidence 99999 99987521 03 39999985
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.85 E-value=6.7e-21 Score=134.09 Aligned_cols=92 Identities=26% Similarity=0.401 Sum_probs=83.8
Q ss_pred CCeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCC---CcccHHHHhcCCCCCcEE
Q 033973 1 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVA 76 (107)
Q Consensus 1 ~Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~---~i~g~~~~l~~m~~Ge~~ 76 (107)
.||+++++++|+|.. ++.||.|++||++++ +| ++|++ +|+.|.+|.++ +++||+++|.+|++||++
T Consensus 168 ~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG---~~fd~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~ 237 (280)
T 1q1c_A 168 GGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHS 237 (280)
T ss_dssp SSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred cceeEEeeecccccccccCCceEEEEEEEEe-CC---EEEec------CCeEEEecCCcccccchhHHHHHhCCCCCcEE
Confidence 478999999999984 999999999999998 77 99997 38999999887 599999999999999999
Q ss_pred EEEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 77 RLRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 77 ~v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
+|.|||+++ ||+++.+ +..||||++|
T Consensus 238 ~v~ip~~~~--yG~~~~~---~~~IP~~~~l 263 (280)
T 1q1c_A 238 IVYLKPSYA--FGSVGKE---KFQIPPNAEL 263 (280)
T ss_dssp EEEECGGGT--TTTTCBG---GGTBCTTCCE
T ss_pred EEEEChhHc--CCcCCCc---cCccCCCCeE
Confidence 999999999 9999986 5559999975
No 30
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.80 E-value=1.9e-19 Score=117.29 Aligned_cols=73 Identities=27% Similarity=0.458 Sum_probs=66.5
Q ss_pred CCCCCEEEEEEEEEEeCCCceeEEecccCC------------CCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCc
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~~~~st~~~------------~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
++.||.|++||++++ || ++||+|+.. ..+|+.|.+|.+++++||+++|.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~ 77 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (157)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcH
Confidence 688999999999999 87 999999852 12599999999999999999999999999999999999
Q ss_pred hhhccccCCCC
Q 033973 84 VLVDFHNGGFN 94 (107)
Q Consensus 84 ~a~~yG~~g~~ 94 (107)
+| ||+++..
T Consensus 78 ~a--YG~~~~~ 86 (157)
T 3pr9_A 78 KA--FGKRDPS 86 (157)
T ss_dssp GT--TCCCCGG
T ss_pred Hh--cCCCChH
Confidence 99 9998764
No 31
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.78 E-value=2.9e-19 Score=117.55 Aligned_cols=73 Identities=25% Similarity=0.405 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCCC
Q 033973 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGGF 93 (107)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g~ 93 (107)
.++.||.|++||++++.|| ++||+|++++ +|+.|.+|.+++++||+++|.+|++|++++|.|||++| ||++..
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG---~vfDss~~~~-~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~A--YG~~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDG---TTAESTRNNG-KPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAA--FGVPSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETTS---CEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGT--TCCCCG
T ss_pred cCCCCCEEEEEEEEEECCC---CEEEecCCCC-CCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHh--cCCCCh
Confidence 5899999999999998777 9999998633 59999999999999999999999999999999999999 999765
No 32
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.78 E-value=1.6e-19 Score=116.94 Aligned_cols=74 Identities=26% Similarity=0.474 Sum_probs=67.0
Q ss_pred CCCCCEEEEEEEEEEeCCCceeEEecccC------------CCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCc
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKD------------PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~~~~st~~------------~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
++.||.|++||++++.+| ++||+|++ ++..|+.|.+|.+++++||+++|.+|++|+++++.|||+
T Consensus 2 i~~gd~V~v~Y~g~~~dG---~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~ 78 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESG---DVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAE 78 (151)
T ss_dssp CCTTCEEEECCEECCTTS---CCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTT
T ss_pred CCCCCEEEEEEEEEECCC---CEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcH
Confidence 688999999999998677 99999963 233699999999999999999999999999999999999
Q ss_pred hhhccccCCCC
Q 033973 84 VLVDFHNGGFN 94 (107)
Q Consensus 84 ~a~~yG~~g~~ 94 (107)
+| ||+++..
T Consensus 79 ~a--YG~~~~~ 87 (151)
T 1ix5_A 79 KA--YGNRNEM 87 (151)
T ss_dssp TS--SCSCCST
T ss_pred HH--CCCCCcc
Confidence 99 9998764
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.78 E-value=2e-18 Score=111.80 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=67.8
Q ss_pred CCCCCCCEEEEEEEEEEe-CCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCC
Q 033973 14 PKPVAGQKVTVHCTGYGK-NGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGG 92 (107)
Q Consensus 14 ~~~~~gd~V~v~y~~~~~-~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g 92 (107)
.+++.||.|++||++++. +| ++|++|+.. .|+.|.+|.+++++||+++|.+|++|+++++.|||++| ||+++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG---~~fdss~~~--~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~a--YG~~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSS---IVLDSNISK--EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEA--YGVYE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCS---CEEEESTTT--CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGT--TCSSC
T ss_pred cCCCCCCEEEEEEEEEECCCC---CEEEeCCCC--cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHH--cCCCC
Confidence 458899999999999986 66 999999862 59999999999999999999999999999999999999 99987
Q ss_pred CC
Q 033973 93 FN 94 (107)
Q Consensus 93 ~~ 94 (107)
..
T Consensus 78 ~~ 79 (151)
T 2kr7_A 78 SS 79 (151)
T ss_dssp SC
T ss_pred cc
Confidence 63
No 34
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.76 E-value=3.2e-18 Score=117.44 Aligned_cols=73 Identities=27% Similarity=0.458 Sum_probs=66.4
Q ss_pred CCCCCEEEEEEEEEEeCCCceeEEecccCC------------CCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCc
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDP------------GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~~~~st~~~------------~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
++.||.|.+||++++ || ++||+|+.. ...|+.|.+|.+++++||+++|.+|++|+++++.|||+
T Consensus 2 i~~Gd~V~v~Y~g~l-dG---~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe 77 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DG---KLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPE 77 (231)
T ss_dssp CCTTCEEEEEEEEEE-TT---EEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGG
T ss_pred CCCCCEEEEEEEEEE-CC---EEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcH
Confidence 688999999999999 87 999999852 12599999999999999999999999999999999999
Q ss_pred hhhccccCCCC
Q 033973 84 VLVDFHNGGFN 94 (107)
Q Consensus 84 ~a~~yG~~g~~ 94 (107)
+| ||.++..
T Consensus 78 ~A--YGe~~~~ 86 (231)
T 3prb_A 78 KA--FGKRDPS 86 (231)
T ss_dssp GT--TCCCCGG
T ss_pred Hh--cCCCChH
Confidence 99 9998753
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.75 E-value=4.2e-18 Score=114.36 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCCCC
Q 033973 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGGFN 94 (107)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g~~ 94 (107)
+++.+|.|+++|++++.++ ++|++|+.+ +|+.|.+|.++++++|+++|.+|++|++++|.|||++| ||+++..
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~a--YGe~~~~ 74 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA--YGQYDEN 74 (196)
T ss_dssp CCCSSCEEEEEEEEEETTT---EEEEECCTT--SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTT--SSCCCTT
T ss_pred CCCCCCEEEEEEEEEECCC---CEEEecCCC--CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHh--cCCCChh
Confidence 3789999999999998677 999999873 69999999999999999999999999999999999999 9998654
No 36
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.75 E-value=5.1e-18 Score=111.86 Aligned_cols=72 Identities=17% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCCCC
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGGFN 94 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g~~ 94 (107)
++.||.|+++|++++.+| ++|++++.+ +|+.|.+|.+++++||+++|.+|++|++++|.|||++| ||+++..
T Consensus 3 i~~gd~V~v~Y~g~~~dG---~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~a--YG~~~~~ 74 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDG---VLVDESPVS--APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDA--YGQYDEN 74 (171)
T ss_dssp CCTTEEEEEEEEEEETTS---CEEEECCSS--SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTS--SCCCCTT
T ss_pred CCCCCEEEEEEEEEECCC---CEEeeccCC--cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHh--cCCCChh
Confidence 789999999999998777 999999863 59999999999999999999999999999999999999 9998653
No 37
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.72 E-value=3.6e-17 Score=116.33 Aligned_cols=91 Identities=27% Similarity=0.425 Sum_probs=82.4
Q ss_pred CeEEEEecccCCC-CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCC---CcccHHHHhcCCCCCcEEE
Q 033973 2 GIEKQILTPGNGP-KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGS---VIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 2 Gl~~~~~~~G~g~-~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~---~i~g~~~~l~~m~~Ge~~~ 77 (107)
||.++++++|+|. .|..|+.|.+||++++ +| ++||++ |+.|.+|.+. ++++|+++|..|++|+++.
T Consensus 26 ~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g---~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 26 GIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KD---KLFDQR------ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp SEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TT---EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred cEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CC---EEEecC------CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 7899999999998 5999999999999998 77 999984 8999999875 6899999999999999999
Q ss_pred EEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 78 LRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 78 v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
+.|+|+++ ||..|.. ...||+++++
T Consensus 96 l~i~p~~a--yg~~g~~---~~~i~~~~~l 120 (336)
T 1p5q_A 96 VYLKPSYA--FGSVGKE---KFQIPPNAEL 120 (336)
T ss_dssp EEECTTTT--TTTTCBG---GGTBCSSCCE
T ss_pred EEECCccc--cCcCCCC---ccCCCCCCeE
Confidence 99999999 9999987 5449998864
No 38
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.72 E-value=1.4e-17 Score=103.06 Aligned_cols=72 Identities=26% Similarity=0.419 Sum_probs=62.8
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCC
Q 033973 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGG 92 (107)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g 92 (107)
+.+++.||.|++||++++ || ++|++++. +|+.|.+|.+++++||+++|.+|++|+++++.||.... ||..+
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG---~~fdss~~---~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~--Yg~~~ 97 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DN---KKLASASA---QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD--YHVKE 97 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TT---EECSTTCC---SEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT--SSSSG
T ss_pred CCCCCCCCEEEEEEEEEE-CC---EEcccCCc---cCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh--hCcCC
Confidence 457999999999999998 87 99999964 69999999999999999999999999999999984455 88754
Q ss_pred C
Q 033973 93 F 93 (107)
Q Consensus 93 ~ 93 (107)
.
T Consensus 98 ~ 98 (113)
T 1hxv_A 98 L 98 (113)
T ss_dssp G
T ss_pred C
Confidence 3
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.68 E-value=1.1e-16 Score=104.37 Aligned_cols=66 Identities=17% Similarity=0.217 Sum_probs=62.1
Q ss_pred CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCCC
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGGF 93 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g~ 93 (107)
++.||.|++||+++ .|| ++|++++ +.|.+|.+++++||+++|.+|++|+++++.|||++| ||+++.
T Consensus 3 i~~gd~V~v~Y~g~-~dG---~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~a--YG~~~~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEG---EVLDQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKA--YGPHDP 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETT---EEEEEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGT--TCCCCG
T ss_pred CCCCCEEEEEEEEE-ECC---EEEEeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHH--cCCCCc
Confidence 68899999999999 788 9999875 889999999999999999999999999999999999 999865
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.51 E-value=1.3e-13 Score=101.68 Aligned_cols=91 Identities=25% Similarity=0.379 Sum_probs=79.9
Q ss_pred CeEEEEecccCCCC-CCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCC---CCcccHHHHhcCCCCCcEEE
Q 033973 2 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---SVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 2 Gl~~~~~~~G~g~~-~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~---~~i~g~~~~l~~m~~Ge~~~ 77 (107)
++.++++++|.|.. |..||.|.+||++++ +| ++|++ +++.|.+|.+ .++++|++|+..|++|+++.
T Consensus 147 ~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g---~~f~~------~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~ 216 (457)
T 1kt0_A 147 GIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG---RMFDC------RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCI 216 (457)
T ss_dssp SEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT---EEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEE
T ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC---eEEec------CceEEEeCCCccccCChHHHHHHHhCCCCCEEE
Confidence 56778889998864 999999999999998 77 99996 3699999966 58999999999999999999
Q ss_pred EEECCchhhccccCCCCCCCCccCCCCCCC
Q 033973 78 LRITPMVLVDFHNGGFNLTQSWILRYKSCR 107 (107)
Q Consensus 78 v~ip~~~a~~yG~~g~~~~~~~~ipp~s~l 107 (107)
|.++|.++ |+..|.. ...|||++++
T Consensus 217 l~i~P~~a--y~~~g~~---~~~ip~~~~l 241 (457)
T 1kt0_A 217 LYLGPRYG--FGEAGKP---KFGIEPNAEL 241 (457)
T ss_dssp EEECGGGT--TCSSCBG---GGTBCTTCCE
T ss_pred EEECcccc--cCCCCCc---ccCCCCCCEE
Confidence 99999999 9999986 5459998863
No 41
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.44 E-value=3e-13 Score=100.03 Aligned_cols=73 Identities=26% Similarity=0.485 Sum_probs=66.4
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCC
Q 033973 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGG 92 (107)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g 92 (107)
+.+++.||.|++||+++. || +.|++++. .|+.|.+|.+++++||+++|.||++|+++.|.||+..+ ||..+
T Consensus 155 ~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~--yg~~~ 225 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-DG---EEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEE--YHAEN 225 (432)
T ss_dssp SSCCCTTCEEEECEEEES-SS---CBCSSCCC---SSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTT--CSCTT
T ss_pred CCCCCCCCEEEEEEEEee-CC---eEccCCCc---cceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchh--hCCCC
Confidence 456999999999999994 77 99999874 69999999999999999999999999999999999999 99866
Q ss_pred CC
Q 033973 93 FN 94 (107)
Q Consensus 93 ~~ 94 (107)
..
T Consensus 226 la 227 (432)
T 1w26_A 226 LK 227 (432)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.26 E-value=4.1e-12 Score=92.91 Aligned_cols=72 Identities=22% Similarity=0.456 Sum_probs=63.1
Q ss_pred CCCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEECCchhhccccCC
Q 033973 13 GPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRITPMVLVDFHNGG 92 (107)
Q Consensus 13 g~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~ip~~~a~~yG~~g 92 (107)
..+++.||.|++||+++. || +.|+++.. .|+.|.+|.++++|||+++|.||++|+++.|.|+.... |+..+
T Consensus 158 ~~~~~~gD~V~i~y~g~~-dG---~~fd~~~~---~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~d--y~~~~ 228 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI-DG---VEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPED--YHAEN 228 (392)
T ss_dssp SCCCCTTCEEEEEEEEES-SS---SCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTT--CSCTT
T ss_pred CCCCCCCCEEEEEEEEEE-CC---EEccCCCc---cceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccc--cccCC
Confidence 346899999999999994 77 89998854 69999999999999999999999999999999985567 88654
Q ss_pred C
Q 033973 93 F 93 (107)
Q Consensus 93 ~ 93 (107)
.
T Consensus 229 l 229 (392)
T 1t11_A 229 L 229 (392)
T ss_dssp T
T ss_pred C
Confidence 4
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.09 E-value=4.3e-06 Score=61.78 Aligned_cols=56 Identities=16% Similarity=0.302 Sum_probs=48.4
Q ss_pred CCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCCCCcccHHHHhcCCCCCcEEEEEE
Q 033973 15 KPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRI 80 (107)
Q Consensus 15 ~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~~~i~g~~~~l~~m~~Ge~~~v~i 80 (107)
+++.||.|+++|+++. || ..|+++.. .++.+.+|.+. + |+++|.||++|+++.|.+
T Consensus 154 ~a~~gD~V~id~~~~~-dG---~~~~~~~~---~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~v 209 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EE---GKKLTSRE---YEYVISEDEDR--P-FVKDLVGKKKGDVVEIER 209 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TT---SCEEEEEE---EEEECCSSCCC--T-THHHHTTCCTTCEEEEEE
T ss_pred ccCCCCEEEEEEEEEE-CC---EECcCCCC---CCeEEEecCCc--h-HHHHhCCCCCCceEEEEE
Confidence 5889999999999884 77 89987654 57888888876 4 999999999999999987
No 44
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=68.97 E-value=18 Score=29.35 Aligned_cols=60 Identities=22% Similarity=0.252 Sum_probs=46.4
Q ss_pred CCCCCEEEEEEEEEEeCCCcee-----------------------------EEecccCCCCccEEEEeCCCCCcccHHHH
Q 033973 16 PVAGQKVTVHCTGYGKNGDLSQ-----------------------------KFWSTKDPGQQPFTFQIGKGSVIKGWDEG 66 (107)
Q Consensus 16 ~~~gd~V~v~y~~~~~~gg~~~-----------------------------~~~st~~~~~~p~~~~~G~~~~i~g~~~~ 66 (107)
|..|+.+.|.|+..+...+.-+ .+++ ...+.|.+|.+.+.+-++..
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies-----~~e~~fe~g~g~~~~~le~v 635 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIES-----NEEIEFEVGTGSMNPHIESE 635 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEE-----EEEEEEEETTTCBCHHHHHH
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccc-----cHHHHHHHhcCCccchhhhe
Confidence 7899999999999875332100 1111 13688999999999999999
Q ss_pred hcCCCCCcEEEEEE
Q 033973 67 VMGMQVGEVARLRI 80 (107)
Q Consensus 67 l~~m~~Ge~~~v~i 80 (107)
+..|..|+...+..
T Consensus 636 V~qms~gqT~~F~~ 649 (950)
T 3htx_A 636 VTQMTVGEYASFKM 649 (950)
T ss_dssp HTTCCTTCEEEEEE
T ss_pred eeeccccceeEEec
Confidence 99999999998874
No 45
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=44.02 E-value=20 Score=21.82 Aligned_cols=25 Identities=16% Similarity=0.353 Sum_probs=21.1
Q ss_pred CcccHHHHhcCCCCCcEEEEEECCc
Q 033973 59 VIKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 59 ~i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
...=+-.||.|.++|+.+.+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3445889999999999999999865
No 46
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=41.02 E-value=26 Score=21.81 Aligned_cols=24 Identities=21% Similarity=0.331 Sum_probs=20.3
Q ss_pred cccHHHHhcCCCCCcEEEEEECCc
Q 033973 60 IKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 60 i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
..=+-.||.|.++|+.+.+..|..
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETTE
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345789999999999999999853
No 47
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=38.94 E-value=17 Score=21.51 Aligned_cols=23 Identities=17% Similarity=0.648 Sum_probs=19.9
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+++.+.|++++..|++|+...
T Consensus 78 ~~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 78 SSGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp ETTSSCHHHHHHHTTSCBTCBCC
T ss_pred cCCCCCchHHHHHhcCCCCCCCC
Confidence 35789999999999999999754
No 48
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=36.66 E-value=65 Score=18.92 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=18.1
Q ss_pred CCCCCCCEEEE------EEEEEEeCCCceeEEe
Q 033973 14 PKPVAGQKVTV------HCTGYGKNGDLSQKFW 40 (107)
Q Consensus 14 ~~~~~gd~V~v------~y~~~~~~gg~~~~~~ 40 (107)
..|++||.|.+ |+-.|..|+ .++-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg---~ViH 35 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDG---YVIH 35 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETT---EEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCC---eEEE
Confidence 35999999986 677777777 7764
No 49
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=36.32 E-value=20 Score=22.03 Aligned_cols=24 Identities=8% Similarity=0.135 Sum_probs=20.3
Q ss_pred cccHHHHhcCCCCCcEEEEEECCc
Q 033973 60 IKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 60 i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
..=+-.||.|.++|+.+.+..|..
T Consensus 94 ~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 94 LAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345779999999999999998854
No 50
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=33.93 E-value=1e+02 Score=20.35 Aligned_cols=52 Identities=19% Similarity=0.138 Sum_probs=35.9
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCC---------CCcccHHHHhcCCCCCcEE
Q 033973 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG---------SVIKGWDEGVMGMQVGEVA 76 (107)
Q Consensus 14 ~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~---------~~i~g~~~~l~~m~~Ge~~ 76 (107)
..+++||.|.+++-+.. +| -.-|. ..+|.+|.- .+..+++.++..+++|-++
T Consensus 83 ~~l~~Gdlv~iD~g~~~-~G---Y~sD~-------tRT~~vG~~~~~~~~l~~~v~~a~~~~i~~~kpG~~~ 143 (264)
T 3tb5_A 83 KVLKDGDLIKVDMCVDL-KG---AISDS-------CWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRI 143 (264)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEEE-------EEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBH
T ss_pred ccccCCCEEEEecccee-cc---eeeec-------ccccccCCccHHHHHHHHHHHHHHHHHHhhhCCCCCH
Confidence 45899999999998775 66 44443 455666643 2456677788888888653
No 51
>2rqs_A Parvulin-like peptidyl-prolyl isomerase; CIS/trans isomerisation, cenarcheaum symbiosum, low temperat NIMA-kinase, PIN1, cell cycle; NMR {Cenarchaeum symbiosum}
Probab=33.32 E-value=29 Score=19.47 Aligned_cols=23 Identities=35% Similarity=0.819 Sum_probs=19.7
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 60 ~~~~l~~~f~~a~~~l~~G~is~ 82 (97)
T 2rqs_A 60 GRGKMVKPFEDAAFRLQVGEVSE 82 (97)
T ss_dssp CTTSSCHHHHHHHTTCTTSCBCC
T ss_pred cCCCCCHHHHHHHHcCCCCCccc
Confidence 45788999999999999999753
No 52
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=33.17 E-value=28 Score=21.80 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=21.5
Q ss_pred CCcccHHHHhcCCCCCcEEEEEECCc
Q 033973 58 SVIKGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 58 ~~i~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
+...-+-.||.|.++|+.+.+..|..
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~G 144 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPAG 144 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSSC
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCCC
Confidence 34455889999999999999998853
No 53
>2pv1_A Chaperone SURA; surviVal protein A, peptidyl-prolyl CIS-trans isomerase domain, peptide, complex; 1.30A {Escherichia coli} SCOP: d.26.1.1 PDB: 2pv2_A
Probab=29.46 E-value=42 Score=18.92 Aligned_cols=23 Identities=4% Similarity=0.076 Sum_probs=19.6
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 64 ~~~~l~~~f~~a~~~l~~G~is~ 86 (103)
T 2pv1_A 64 RIQELPGIFAQALSTAKKGDIVG 86 (103)
T ss_dssp CGGGSCHHHHHHTTTCCTTCEEE
T ss_pred chhhcCHHHHHHHHcCCCCCeec
Confidence 34678899999999999999765
No 54
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=28.85 E-value=1.4e+02 Score=20.34 Aligned_cols=51 Identities=10% Similarity=0.062 Sum_probs=33.7
Q ss_pred CCCCCCCEEEEEEEEEEeCCCceeEEecccCCCCccEEEEeCCC------CCcccHHHHhcCCCCCcE
Q 033973 14 PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKG------SVIKGWDEGVMGMQVGEV 75 (107)
Q Consensus 14 ~~~~~gd~V~v~y~~~~~~gg~~~~~~st~~~~~~p~~~~~G~~------~~i~g~~~~l~~m~~Ge~ 75 (107)
..+++||.|.+++-+.. +| -.-|. ..+|.+|.. .+..+++.++..+++|-+
T Consensus 71 ~~L~~GDiv~iD~G~~~-~G---Y~sD~-------tRT~~vG~~~~~l~~~~~~a~~~~i~~~kpG~~ 127 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHI-DG---FIADT-------AVTVRVGMEEDELMEAAKEALNAAISVARAGVE 127 (295)
T ss_dssp CBCCTTCEEEEEEEEEE-TT---EEEEE-------EEEEETTSCCCHHHHHHHHHHHHHHHHCSTTCB
T ss_pred ccccCCCEEEEEEeEEE-CC---EEEEE-------EEEEEeCHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 45899999999999886 66 44443 455666641 133556666667777654
No 55
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, 11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans}
Probab=28.55 E-value=29 Score=20.34 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=19.9
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 65 ~~~~l~~~f~~a~~~l~~GeiS~ 87 (112)
T 3gpk_A 65 RLAQLPTELATTAASMGPGQLAG 87 (112)
T ss_dssp CGGGSCHHHHHHHHHCCTTCEEE
T ss_pred cccccCHHHHHHHHhCCCCCccc
Confidence 34678999999999999999865
No 56
>1jns_A Peptidyl-prolyl CIS-trans isomerase C; alpha-beta sandwich, CIS peptide bond; NMR {Escherichia coli} SCOP: d.26.1.1 PDB: 1jnt_A
Probab=27.45 E-value=33 Score=18.99 Aligned_cols=22 Identities=23% Similarity=0.362 Sum_probs=19.2
Q ss_pred CCCCcccHHHHhcCCCCCcEEE
Q 033973 56 KGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 56 ~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
.+.+.+.|++++..|++|+...
T Consensus 54 ~~~l~~~f~~a~~~l~~G~is~ 75 (92)
T 1jns_A 54 QGQMVPAFDKVVFSCPVLEPTG 75 (92)
T ss_dssp TTSSCHHHHHHHHHSCTTCCEE
T ss_pred CcccCHHHHHHHHhCCCCCcCC
Confidence 4678999999999999999764
No 57
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=26.26 E-value=75 Score=17.25 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=22.6
Q ss_pred CCCccc----HHHHhcCCCCCcEEEEEECCchh
Q 033973 57 GSVIKG----WDEGVMGMQVGEVARLRITPMVL 85 (107)
Q Consensus 57 ~~~i~g----~~~~l~~m~~Ge~~~v~ip~~~a 85 (107)
+..+|. ..++|..|+.|+..++.+.-..+
T Consensus 17 Gl~CP~Pvl~~kkal~~l~~G~~l~V~~dd~~a 49 (82)
T 3lvj_C 17 GLRCPEPVMMVRKTVRNMQPGETLLIIADDPAT 49 (82)
T ss_dssp TCCTTHHHHHHHHHHHTSCTTCEEEEEECCTTH
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEEEEECCccH
Confidence 445555 78999999999999999875443
No 58
>1zk6_A Foldase protein PRSA; alpha/beta structure, isomerase; NMR {Bacillus subtilis}
Probab=26.25 E-value=32 Score=19.03 Aligned_cols=22 Identities=18% Similarity=0.471 Sum_probs=19.1
Q ss_pred CCCCcccHHHHhcCCCCCcEEE
Q 033973 56 KGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 56 ~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
.+.+.+.|++++..|++|+...
T Consensus 56 ~~~l~~~f~~a~~~l~~G~is~ 77 (93)
T 1zk6_A 56 EGQMDETFSKAAFKLKTGEVSD 77 (93)
T ss_dssp TTSSCTTHHHHHHHSCTTCBCC
T ss_pred cccCCHHHHHHHHcCCCCCccc
Confidence 5788999999999999998653
No 59
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=25.91 E-value=25 Score=22.03 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=17.2
Q ss_pred CcccHHHHhcCCCCCcEEEEEECC
Q 033973 59 VIKGWDEGVMGMQVGEVARLRITP 82 (107)
Q Consensus 59 ~i~g~~~~l~~m~~Ge~~~v~ip~ 82 (107)
...=+-.||.|.++|+.+.+..|.
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~ 145 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPG 145 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCC
Confidence 344588999999999999998885
No 60
>2jzv_A Foldase protein PRSA; ppiase, parvulin, proline isomerase, lipoprotein, membrane, palmitate, rotamase; NMR {Staphylococcus aureus}
Probab=24.75 E-value=37 Score=19.52 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=19.4
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 74 ~~~~l~~~f~~a~~~l~~G~is~ 96 (111)
T 2jzv_A 74 LKGQTDKDFEKALFKLKDGEVSE 96 (111)
T ss_dssp ETTSSCHHHHHHHHTCCTTCBCC
T ss_pred cCCcccHHHHHHHHhCCCCCcCc
Confidence 35778999999999999998753
No 61
>4g2p_A Chaperone SURA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, pcsep; 1.82A {Salmonella enterica subsp}
Probab=23.82 E-value=30 Score=20.08 Aligned_cols=23 Identities=4% Similarity=0.199 Sum_probs=19.4
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 69 ~~~~l~~~f~~a~~~l~~Geis~ 91 (110)
T 4g2p_A 69 TPDIFDPAFRDALTKLHKGQISA 91 (110)
T ss_dssp CGGGSCHHHHHHHHTCCTTCBCC
T ss_pred cccccCHHHHHHHHcCCCCCcCc
Confidence 34678999999999999999753
No 62
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=23.56 E-value=46 Score=20.52 Aligned_cols=22 Identities=9% Similarity=0.187 Sum_probs=17.4
Q ss_pred ccHHHHhcCCCCCcEEEEEECCc
Q 033973 61 KGWDEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 61 ~g~~~~l~~m~~Ge~~~v~ip~~ 83 (107)
.+-..-|..|++||.+.++ |..
T Consensus 29 ~~arn~lr~Mk~GD~~~fY-~~~ 50 (147)
T 2p5d_A 29 ERYKNTINKVKVGDKLIIY-EIQ 50 (147)
T ss_dssp GGGHHHHTTCCTTCEEEEE-ECC
T ss_pred HHHHHHHHhCCCCCEEEEE-Eec
Confidence 3456678899999999999 543
No 63
>3ui4_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; peptidyl-prolyl-isomerase; 0.80A {Homo sapiens} SCOP: d.26.1.1 PDB: 3ui5_A 3ui6_A 1fjd_A 1eq3_A
Probab=23.07 E-value=41 Score=19.16 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=18.4
Q ss_pred CCCCcccHHHHhcCCCCCcEE
Q 033973 56 KGSVIKGWDEGVMGMQVGEVA 76 (107)
Q Consensus 56 ~~~~i~g~~~~l~~m~~Ge~~ 76 (107)
.+.+.+.|++++..|++|+..
T Consensus 57 ~~~l~~~f~~a~~~l~~G~vs 77 (101)
T 3ui4_A 57 RGSMVGPFQEAAFALPVSGMD 77 (101)
T ss_dssp TTSSCHHHHHHHHTSCCCBTT
T ss_pred CCCCCHHHHHHHHhCCCCCCc
Confidence 468899999999999999864
No 64
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=22.62 E-value=86 Score=17.84 Aligned_cols=23 Identities=13% Similarity=0.023 Sum_probs=19.1
Q ss_pred cHHHHhcCCCCCcEEEEEECCch
Q 033973 62 GWDEGVMGMQVGEVARLRITPMV 84 (107)
Q Consensus 62 g~~~~l~~m~~Ge~~~v~ip~~~ 84 (107)
-..++|..|+.|+..+|.+.-..
T Consensus 43 ktkkaL~~l~~Ge~L~Vl~dd~~ 65 (97)
T 1je3_A 43 ATLEAMPQLKKGEILEVVSDCPQ 65 (97)
T ss_dssp HHHHHTTTCCSSCEEEEEEBCSS
T ss_pred HHHHHHHcCCCCCEEEEEECCcc
Confidence 37889999999999999987433
No 65
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=22.39 E-value=96 Score=17.62 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=18.8
Q ss_pred HHHHhcCCCCCcEEEEEECCch
Q 033973 63 WDEGVMGMQVGEVARLRITPMV 84 (107)
Q Consensus 63 ~~~~l~~m~~Ge~~~v~ip~~~ 84 (107)
..++|..|+.|+..+|.+.-..
T Consensus 43 tkkaL~~l~~Ge~L~Vl~dd~~ 64 (98)
T 1jdq_A 43 TKRALQNMKPGEILEVWIDYPM 64 (98)
T ss_dssp HHHHHHTCCTTCEEEEEESSCT
T ss_pred HHHHHHhCCCCCEEEEEECCcc
Confidence 6789999999999999987544
No 66
>1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A
Probab=21.96 E-value=33 Score=23.25 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=18.1
Q ss_pred CeEEEEecccCCCCCCCCCEEEEEE
Q 033973 2 GIEKQILTPGNGPKPVAGQKVTVHC 26 (107)
Q Consensus 2 Gl~~~~~~~G~g~~~~~gd~V~v~y 26 (107)
|+++++++.|. +..||.|.+.-
T Consensus 155 G~y~rVl~~G~---V~~GD~v~l~~ 176 (246)
T 1o65_A 155 GWLYSVIAPGK---VSADAPLELVS 176 (246)
T ss_dssp CEEEEEEECEE---EETTSCEEEEE
T ss_pred EEEEEEeeCcE---EcCCCEEEEec
Confidence 89999998765 88999887763
No 67
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=21.61 E-value=37 Score=21.38 Aligned_cols=23 Identities=17% Similarity=0.580 Sum_probs=19.8
Q ss_pred eCCCCCcccHHHHhcCCCCCcEE
Q 033973 54 IGKGSVIKGWDEGVMGMQVGEVA 76 (107)
Q Consensus 54 ~G~~~~i~g~~~~l~~m~~Ge~~ 76 (107)
+..+++.+.|++++..|++|+..
T Consensus 128 ~~~~~l~~~f~~a~f~l~~GeiS 150 (166)
T 3tc5_A 128 FSRGQMQKPFEDASFALRTGEMS 150 (166)
T ss_dssp ECTTSSCHHHHHHHHHSCTTCBC
T ss_pred ecccccCHHHHHHHHhCCCCCCc
Confidence 34578999999999999999964
No 68
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=21.25 E-value=50 Score=20.81 Aligned_cols=23 Identities=30% Similarity=0.621 Sum_probs=19.6
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 140 ~~~~l~~~f~~a~f~L~~GeiS~ 162 (177)
T 1yw5_A 140 SKGQMQPPFEEAAFNLHVGEVSN 162 (177)
T ss_dssp CTTSSCHHHHHHHHTSCTTCBCC
T ss_pred cccccCHHHHHHHHcCCCCCcCC
Confidence 45789999999999999999643
No 69
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=21.18 E-value=69 Score=19.66 Aligned_cols=20 Identities=5% Similarity=0.121 Sum_probs=17.2
Q ss_pred HHHhcCCCCCcEEEEEECCc
Q 033973 64 DEGVMGMQVGEVARLRITPM 83 (107)
Q Consensus 64 ~~~l~~m~~Ge~~~v~ip~~ 83 (107)
..-|..|++||...++.+..
T Consensus 29 rn~lr~mk~GD~~~fYhs~~ 48 (145)
T 2hd9_A 29 KNTLSRVKPGDKLVIYVRQE 48 (145)
T ss_dssp HHHHTTCCTTCEEEEEECCE
T ss_pred HHHHHhCCCCCEEEEEEccc
Confidence 45788999999999999865
No 70
>1j6y_A Peptidyl-prolyl CIS-trans isomerase; parvulin, PIN1, phosphorylation; NMR {Arabidopsis thaliana} SCOP: d.26.1.1
Probab=20.33 E-value=42 Score=20.36 Aligned_cols=23 Identities=26% Similarity=0.710 Sum_probs=19.4
Q ss_pred CCCCCcccHHHHhcCCCCCcEEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVAR 77 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~~ 77 (107)
..+.+.+.|++++..|++|+...
T Consensus 102 ~~~~l~~~f~~a~~~l~~GeiS~ 124 (139)
T 1j6y_A 102 GRGQMQKPFEEATYALKVGDISD 124 (139)
T ss_dssp SSSSSCTHHHHHHHHCCSSSCCS
T ss_pred cccccCHHHHHHHHcCCCCCccc
Confidence 45788999999999999998643
No 71
>3i6c_A Peptidyl-prolyl CIS-trans isomerase NIMA- interacting 1; SBDD, small molecule, ppiase, cell cycle, nucleus, phosphoprotein, rotamase; HET: GIA; 1.30A {Homo sapiens} PDB: 3ik8_A 3ikd_A* 3ikg_A* 3jyj_A* 3kac_A* 1nmw_A
Probab=20.28 E-value=36 Score=20.31 Aligned_cols=22 Identities=18% Similarity=0.592 Sum_probs=19.0
Q ss_pred CCCCCcccHHHHhcCCCCCcEE
Q 033973 55 GKGSVIKGWDEGVMGMQVGEVA 76 (107)
Q Consensus 55 G~~~~i~g~~~~l~~m~~Ge~~ 76 (107)
..+.+.+.|++++..|++|+..
T Consensus 86 ~~~~l~~~f~~a~f~l~~GeiS 107 (123)
T 3i6c_A 86 SRGQMQKPFEDASFALRTGEMS 107 (123)
T ss_dssp ETTTSCHHHHHHHHHSCTTCBC
T ss_pred cCCCCCHHHHHHHHhCCCCCcc
Confidence 3478999999999999999964
Done!