Query 033974
Match_columns 107
No_of_seqs 151 out of 1007
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:02:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.9 6.5E-23 2.2E-27 125.3 7.6 70 31-100 4-73 (79)
2 2ctq_A DNAJ homolog subfamily 99.9 1.5E-22 5.2E-27 131.4 8.4 71 31-101 17-87 (112)
3 2ys8_A RAB-related GTP-binding 99.9 2.6E-22 8.8E-27 125.8 8.6 75 19-94 12-86 (90)
4 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.8E-22 6E-27 122.9 7.4 67 33-100 2-68 (77)
5 2och_A Hypothetical protein DN 99.9 2E-22 6.8E-27 121.6 7.0 68 30-100 4-71 (73)
6 2cug_A Mkiaa0962 protein; DNAJ 99.9 3.2E-22 1.1E-26 124.7 8.0 69 31-100 14-82 (88)
7 2ctp_A DNAJ homolog subfamily 99.9 2E-22 7E-27 122.9 6.8 69 31-100 4-72 (78)
8 2ctr_A DNAJ homolog subfamily 99.9 4.5E-22 1.5E-26 124.1 8.0 69 32-101 5-73 (88)
9 2yua_A Williams-beuren syndrom 99.9 6E-22 2E-26 126.0 8.1 68 31-98 14-81 (99)
10 2ctw_A DNAJ homolog subfamily 99.9 1E-21 3.6E-26 126.9 9.0 72 31-102 14-85 (109)
11 2ej7_A HCG3 gene; HCG3 protein 99.9 4.7E-22 1.6E-26 122.2 6.9 69 32-100 7-76 (82)
12 2lgw_A DNAJ homolog subfamily 99.9 1.8E-21 6.2E-26 124.0 9.1 68 34-101 2-70 (99)
13 2qsa_A DNAJ homolog DNJ-2; J-d 99.9 1.5E-21 5.3E-26 125.9 7.8 73 29-101 10-86 (109)
14 1wjz_A 1700030A21RIK protein; 99.9 6.3E-22 2.1E-26 124.4 5.6 68 31-98 13-86 (94)
15 2dmx_A DNAJ homolog subfamily 99.9 1.7E-21 5.8E-26 122.2 7.6 69 32-100 7-76 (92)
16 2o37_A Protein SIS1; HSP40, J- 99.9 1.4E-21 5E-26 122.7 7.1 68 30-100 4-71 (92)
17 1bq0_A DNAJ, HSP40; chaperone, 99.8 5.3E-22 1.8E-26 127.0 2.4 68 33-100 2-69 (103)
18 3apq_A DNAJ homolog subfamily 99.8 1.6E-20 5.5E-25 131.3 7.1 67 34-100 2-68 (210)
19 2l6l_A DNAJ homolog subfamily 99.8 6.6E-20 2.2E-24 124.6 8.3 69 32-100 8-82 (155)
20 1iur_A KIAA0730 protein; DNAJ 99.8 3.2E-20 1.1E-24 116.0 4.7 62 32-93 14-76 (88)
21 3hho_A CO-chaperone protein HS 99.8 1.9E-19 6.4E-24 124.9 8.2 66 33-98 3-75 (174)
22 3bvo_A CO-chaperone protein HS 99.8 3E-19 1E-23 126.9 9.0 69 29-97 38-113 (207)
23 1faf_A Large T antigen; J doma 99.8 1.3E-19 4.5E-24 111.1 5.5 59 33-95 10-70 (79)
24 1fpo_A HSC20, chaperone protei 99.8 6.2E-19 2.1E-23 121.9 6.9 64 35-98 2-72 (171)
25 2qwo_B Putative tyrosine-prote 99.8 2E-19 6.7E-24 113.3 3.9 63 27-89 25-91 (92)
26 1gh6_A Large T antigen; tumor 99.8 2.7E-20 9.2E-25 121.4 -0.5 62 33-98 7-70 (114)
27 2guz_A Mitochondrial import in 99.8 4.1E-19 1.4E-23 106.7 4.4 57 32-92 12-69 (71)
28 1n4c_A Auxilin; four helix bun 99.8 2.7E-19 9.2E-24 124.9 3.9 64 32-95 115-181 (182)
29 3lz8_A Putative chaperone DNAJ 99.8 5E-20 1.7E-24 138.5 0.0 73 26-99 20-92 (329)
30 3ag7_A Putative uncharacterize 99.7 3.7E-19 1.3E-23 114.6 3.1 62 29-91 36-104 (106)
31 2pf4_E Small T antigen; PP2A, 99.7 2.1E-19 7.2E-24 124.7 1.7 65 33-101 10-76 (174)
32 3uo3_A J-type CO-chaperone JAC 99.7 1.6E-17 5.5E-22 115.8 4.4 65 31-98 8-79 (181)
33 3apo_A DNAJ homolog subfamily 99.7 6.4E-18 2.2E-22 136.8 1.8 72 30-101 17-88 (780)
34 2guz_B Mitochondrial import in 99.3 5.2E-12 1.8E-16 74.5 4.9 53 34-90 4-59 (65)
35 2y4t_A DNAJ homolog subfamily 99.1 5.4E-11 1.9E-15 87.9 5.0 66 32-97 380-448 (450)
36 2pzi_A Probable serine/threoni 91.0 0.16 5.6E-06 40.3 3.5 50 29-86 624-675 (681)
37 2cqn_A Formin-binding protein 59.6 23 0.00079 20.5 5.9 56 43-99 3-61 (77)
38 1qqr_A Streptokinase domain B; 50.7 6.8 0.00023 25.6 1.5 32 35-66 33-64 (138)
39 1ug2_A 2610100B20RIK gene prod 35.9 22 0.00076 21.7 2.1 35 34-68 55-90 (95)
40 2lxi_A RNA-binding protein 10; 30.9 41 0.0014 19.1 2.7 21 39-59 6-26 (91)
41 2lr8_A CAsp8-associated protei 28.4 18 0.00061 20.9 0.0 23 45-67 47-69 (70)
42 1iqt_A AUF1, heterogeneous nuc 22.6 77 0.0026 16.7 2.8 20 40-59 5-24 (75)
43 3cxb_A Protein SIFA; SIFA, SKI 20.1 1.4E+02 0.0049 22.0 4.3 30 52-81 44-73 (336)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=6.5e-23 Score=125.29 Aligned_cols=70 Identities=33% Similarity=0.551 Sum_probs=63.4
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
....++|+||||+++++.++||++|+++++++|||++++.+.+.+.|++|++||++|+||..|..|+.++
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 73 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYG 73 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhcc
Confidence 3567999999999999999999999999999999999876568999999999999999999888777643
No 2
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=131.36 Aligned_cols=71 Identities=24% Similarity=0.330 Sum_probs=65.0
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
....|||+||||+++++.++||++||++++++|||++++.+.+.+.|++|++||++|+||..|..|+.++.
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 87 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRR 87 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhh
Confidence 45689999999999999999999999999999999998655689999999999999999999998887653
No 3
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2.6e-22 Score=125.81 Aligned_cols=75 Identities=21% Similarity=0.280 Sum_probs=65.2
Q ss_pred CccchhhhhhhhcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHH
Q 033974 19 DSHVNFDFLSLLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILM 94 (107)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~ 94 (107)
.+...+.....+....++|+||||+++++.++||++||++++++|||+++++. +.+.|++|++||++|+||..|.
T Consensus 12 ~s~~~~~~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~-~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 12 FTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG-SEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp CCHHHHHHHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTT-HHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCHHHHHHHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcc-HHHHHHHHHHHHHHHCCccccc
Confidence 34445566666777899999999999999999999999999999999998754 8899999999999999997653
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.87 E-value=1.8e-22 Score=122.89 Aligned_cols=67 Identities=37% Similarity=0.615 Sum_probs=61.5
Q ss_pred CCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 33 PKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 33 ~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
..+||+||||+++++.++||++|+++++++|||+++++. +.+.|+.|++||++|+||..|..|+.++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~-~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 68 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG-AEEKFKEIAEAYDVLSDPRKREIFDRYG 68 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTT-HHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcc-HHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 368999999999999999999999999999999998754 8899999999999999999988877654
No 5
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.87 E-value=2e-22 Score=121.58 Aligned_cols=68 Identities=31% Similarity=0.560 Sum_probs=61.0
Q ss_pred hcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
+....+||+||||+++++.++||++|+++++++|||++++. .+.|+.|++||++|+||..|..|+.+|
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 45678999999999999999999999999999999999864 589999999999999999998887765
No 6
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=3.2e-22 Score=124.75 Aligned_cols=69 Identities=33% Similarity=0.523 Sum_probs=63.1
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
....|||+||||+++++.++||++||++++++|||+++++. +.+.|++|++||++|+||..|..|+.++
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~-~~~~f~~i~~Ay~~L~d~~~R~~YD~~g 82 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPG-AEDRFIQISKAYEILSNEEKRTNYDHYG 82 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTT-HHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChh-HHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 35679999999999999999999999999999999998754 8899999999999999999888777664
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=2e-22 Score=122.88 Aligned_cols=69 Identities=36% Similarity=0.551 Sum_probs=62.3
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
....++|+||||+++++.++||++|+++++++|||+++.+ .+.+.|+.|++||++|+||..|..|+.++
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 72 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSNPEKRKQYDQFG 72 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 3567999999999999999999999999999999999875 48899999999999999998888776543
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=4.5e-22 Score=124.07 Aligned_cols=69 Identities=33% Similarity=0.525 Sum_probs=63.1
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
...+||+||||+++++.++||++||++++++|||+++.+ .+.+.|++|++||++|+||..|..|+.++.
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSP-DAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSH-HHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-HHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 467999999999999999999999999999999999864 489999999999999999999988877653
No 9
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=6e-22 Score=125.99 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=62.3
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
....+||+||||+++++.++||++||+|++++|||+++..+.+.+.|++|++||++|+||..|..|+.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~ 81 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDR 81 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 45789999999999999999999999999999999998766689999999999999999988886654
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=1e-21 Score=126.92 Aligned_cols=72 Identities=32% Similarity=0.524 Sum_probs=65.8
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHHHH
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFNQV 102 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q~ 102 (107)
....++|+||||+++++.++||++|++|++++|||++++.+.+.+.|++|++||++|+||..|..|+.++..
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 356799999999999999999999999999999999987667899999999999999999999988876643
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=4.7e-22 Score=122.22 Aligned_cols=69 Identities=35% Similarity=0.637 Sum_probs=62.3
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
...++|+||||+++++.++||++|+++++++|||+++.. +.+.+.|++|++||++|+||..|..|+.++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g 76 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYG 76 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcC
Confidence 457999999999999999999999999999999998875 358899999999999999998888777654
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.86 E-value=1.8e-21 Score=123.99 Aligned_cols=68 Identities=34% Similarity=0.661 Sum_probs=62.5
Q ss_pred CChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
.|||+||||+++++.++||++|+++++++|||+++.. +.+.+.|++|++||++|+||..|..|+.++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR 70 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 4899999999999999999999999999999998865 4588999999999999999999998887763
No 13
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.85 E-value=1.5e-21 Score=125.87 Aligned_cols=73 Identities=26% Similarity=0.385 Sum_probs=65.1
Q ss_pred hhcCCCChhhhhcCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 29 LLAKPKDYYKILEVDYDA-TEEEIRSNYIRLALKWHPDKQKD---RDCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a-~~~~Ik~ayr~l~~~~HPDk~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
......++|+||||++++ +.++||++||++++++|||++++ .+.+.+.|++|++||++|+||..|..|+.++.
T Consensus 10 ~~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 10 LYCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp STTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 345678999999999999 99999999999999999999987 34588999999999999999999988877653
No 14
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.85 E-value=6.3e-22 Score=124.39 Aligned_cols=68 Identities=28% Similarity=0.421 Sum_probs=60.3
Q ss_pred cCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------hHHHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 31 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR------DCATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 31 ~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
....+||+||||+++++.++||++|+++++++|||+++.. ..+.+.|++|++||++|+||..|..|+.
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~ 86 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDL 86 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHH
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4578999999999999999999999999999999998742 4588999999999999999987775543
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.7e-21 Score=122.21 Aligned_cols=69 Identities=33% Similarity=0.582 Sum_probs=62.1
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
...+||+||||+++++.++||++|+++++++|||+++.. +.+.+.|++|++||++|+||..|..|+.++
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 76 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAG 76 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 457999999999999999999999999999999998765 468899999999999999998888776643
No 16
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.4e-21 Score=122.72 Aligned_cols=68 Identities=32% Similarity=0.552 Sum_probs=62.0
Q ss_pred hcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
+....++|+||||+++++.++||++|+++++++|||++++. .+.|++|++||++|+||..|..|+.++
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 71 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYG 71 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHC
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHC
Confidence 44678999999999999999999999999999999999774 479999999999999999999888765
No 17
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.84 E-value=5.3e-22 Score=126.99 Aligned_cols=68 Identities=40% Similarity=0.633 Sum_probs=62.2
Q ss_pred CCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 33 PKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 33 ~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
..++|+||||+++++.++||++||+|++++|||+++..+.+.+.|++|++||++|+||..|..|+.++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 69 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYG 69 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTST
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 46899999999999999999999999999999999865558899999999999999999998877654
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.82 E-value=1.6e-20 Score=131.32 Aligned_cols=67 Identities=33% Similarity=0.517 Sum_probs=62.4
Q ss_pred CChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 34 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 34 ~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
.|||+||||+++++.++||+|||++++++|||++++.+.+.+.|+.|++||++|+||..|..|+.++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~ 68 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYG 68 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhc
Confidence 5899999999999999999999999999999999766668999999999999999999998888765
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=6.6e-20 Score=124.62 Aligned_cols=69 Identities=28% Similarity=0.383 Sum_probs=62.1
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD------CATSRFQEINEAYQEKNGSLILMVKIKFN 100 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~ 100 (107)
...|||+||||+++++.++||++||++++++|||+++... .+.+.|..|++||++|+||..|..|+...
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4679999999999999999999999999999999987652 36799999999999999999998877654
No 20
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.80 E-value=3.2e-20 Score=116.04 Aligned_cols=62 Identities=27% Similarity=0.449 Sum_probs=56.3
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhhchHHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-DCATSRFQEINEAYQEKNGSLIL 93 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~r 93 (107)
...++|+||||+++++.++||++||+|++++|||++++. +.+.+.|++|++||++|+|...|
T Consensus 14 ~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 456899999999999999999999999999999999876 45889999999999999997654
No 21
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.79 E-value=1.9e-19 Score=124.85 Aligned_cols=66 Identities=20% Similarity=0.327 Sum_probs=58.1
Q ss_pred CCChhhhhcCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 33 PKDYYKILEVDYDAT--EEEIRSNYIRLALKWHPDKQKDRDC-----ATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 33 ~~~~y~iLgl~~~a~--~~~Ik~ayr~l~~~~HPDk~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
..|||+||||+++++ ..+||++||++++++|||++++... +.+.|..|++||++|+||..|..|+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLL 75 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 579999999999887 9999999999999999999887642 67899999999999999988875543
No 22
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.79 E-value=3e-19 Score=126.90 Aligned_cols=69 Identities=17% Similarity=0.316 Sum_probs=59.6
Q ss_pred hhcCCCChhhhhcCCCC--CCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHhhchHHHHHHH
Q 033974 29 LLAKPKDYYKILEVDYD--ATEEEIRSNYIRLALKWHPDKQKDRD-----CATSRFQEINEAYQEKNGSLILMVKI 97 (107)
Q Consensus 29 ~~~~~~~~y~iLgl~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~~~ 97 (107)
......|||+||||+++ ++..+||++||+|++++|||++++.. .+.+.|..|++||++|+||..|..|+
T Consensus 38 ~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd 113 (207)
T 3bvo_A 38 APDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYL 113 (207)
T ss_dssp CCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 33456899999999986 79999999999999999999987642 36688999999999999998887664
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.79 E-value=1.3e-19 Score=111.07 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=53.8
Q ss_pred CCChhhhhcCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHH
Q 033974 33 PKDYYKILEVDYD--ATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMV 95 (107)
Q Consensus 33 ~~~~y~iLgl~~~--a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~ 95 (107)
..++|+||||+++ ++.++||++||++++++|||++++ .+.|++|++||++|+|+..|..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH
Confidence 3589999999999 999999999999999999999865 4899999999999999987764
No 24
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.77 E-value=6.2e-19 Score=121.95 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=57.3
Q ss_pred ChhhhhcCCCCC--CHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 35 DYYKILEVDYDA--TEEEIRSNYIRLALKWHPDKQKDRD-----CATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 35 ~~y~iLgl~~~a--~~~~Ik~ayr~l~~~~HPDk~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
|||+||||++++ +..+||++||++++++|||++++.. .+.+.|..|++||++|+||..|..|+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 72 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL 72 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 799999999998 9999999999999999999988753 356899999999999999988876554
No 25
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.77 E-value=2e-19 Score=113.31 Aligned_cols=63 Identities=22% Similarity=0.296 Sum_probs=54.4
Q ss_pred hhhhcCC-CChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHhhc
Q 033974 27 LSLLAKP-KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD---CATSRFQEINEAYQEKNG 89 (107)
Q Consensus 27 ~~~~~~~-~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~d 89 (107)
...+... .++|++|||++.++.++||+|||++++++|||++++.+ .|.+.|++|++||++|.+
T Consensus 25 l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 25 MHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp GGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 3333334 58999999999999999999999999999999987653 478999999999999976
No 26
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.76 E-value=2.7e-20 Score=121.40 Aligned_cols=62 Identities=18% Similarity=0.367 Sum_probs=56.4
Q ss_pred CCChhhhhcCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 33 PKDYYKILEVDYDATE--EEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 33 ~~~~y~iLgl~~~a~~--~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
..++|+||||+++++. ++||++||+|++++|||++++ .+.|++|++||++|+||..|..++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~ 70 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPD 70 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhh
Confidence 4589999999999998 999999999999999999876 4799999999999999998887653
No 27
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.1e-19 Score=106.73 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=51.0
Q ss_pred CCCChhhhhcCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHH
Q 033974 32 KPKDYYKILEVDY-DATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLI 92 (107)
Q Consensus 32 ~~~~~y~iLgl~~-~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~ 92 (107)
...++|+||||++ +++.++||++||+|++++|||++++ .+.|++|++||++|+++..
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~----~~~f~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS----PFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC----HHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHhhhhh
Confidence 3468999999999 7999999999999999999999654 4799999999999999753
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.76 E-value=2.7e-19 Score=124.88 Aligned_cols=64 Identities=23% Similarity=0.283 Sum_probs=57.6
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---HHHHHHHHHHHHHHHhhchHHHHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRD---CATSRFQEINEAYQEKNGSLILMV 95 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~ 95 (107)
...++|+||||++.++.++||++||++++++|||++++.. .+.+.|.+|++||++|+|+..|..
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~ 181 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPL 181 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhh
Confidence 3479999999999999999999999999999999987653 278999999999999999987754
No 29
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.76 E-value=5e-20 Score=138.55 Aligned_cols=73 Identities=32% Similarity=0.448 Sum_probs=0.0
Q ss_pred hhhhhcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhH
Q 033974 26 FLSLLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKF 99 (107)
Q Consensus 26 ~~~~~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~ 99 (107)
.........|||+||||+++|+.++||+|||+|++++|||+++++ .+.++|++|++||++|+||..|..|+.+
T Consensus 20 ~~~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~YD~~ 92 (329)
T 3lz8_A 20 FQSNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRRAEYDQL 92 (329)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cccccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhhhhhcccchh
Confidence 333445568999999999999999999999999999999998875 4899999999999999999999988876
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=3.7e-19 Score=114.62 Aligned_cols=62 Identities=24% Similarity=0.325 Sum_probs=53.8
Q ss_pred hhcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHHHHHhhchH
Q 033974 29 LLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR-------DCATSRFQEINEAYQEKNGSL 91 (107)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~-------~~a~~~f~~i~~Ay~~L~d~~ 91 (107)
......+||+|||++. ++.++||+|||++++++||||+++. ..|.+.|++|++||++|+|+.
T Consensus 36 ~l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 36 ILWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 3445679999999996 9999999999999999999997632 147899999999999999973
No 31
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.74 E-value=2.1e-19 Score=124.67 Aligned_cols=65 Identities=18% Similarity=0.373 Sum_probs=57.0
Q ss_pred CCChhhhhcCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 33 PKDYYKILEVDYDAT--EEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 33 ~~~~y~iLgl~~~a~--~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
..++|+||||+++++ .++||+|||++++++|||++++ .+.|++|++||++|+||..|..|+.+|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 468999999999988 6999999999999999999876 3789999999999999999999988873
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.68 E-value=1.6e-17 Score=115.82 Aligned_cols=65 Identities=17% Similarity=0.364 Sum_probs=57.5
Q ss_pred cCCCChhhhh------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHh
Q 033974 31 AKPKDYYKIL------EVDY-DATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIK 98 (107)
Q Consensus 31 ~~~~~~y~iL------gl~~-~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~ 98 (107)
....|||+|| |+++ +++..+||++||+|++++|||++++ +.+.|..|++||++|+||..|..|+.
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~ 79 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYML 79 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 3467999999 4665 8999999999999999999999887 56899999999999999988886655
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.67 E-value=6.4e-18 Score=136.84 Aligned_cols=72 Identities=31% Similarity=0.465 Sum_probs=40.0
Q ss_pred hcCCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhchHHHHHHHhHHH
Q 033974 30 LAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGSLILMVKIKFNQ 101 (107)
Q Consensus 30 ~~~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~~~~~~q 101 (107)
.....|||+||||+++|+.++||+|||++++++|||++++.+.+.+.|++|++||++|+||..|..|+.+|.
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~ 88 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE 88 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc
Confidence 445689999999999999999999999999999999997666689999999999999999999999888763
No 34
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.27 E-value=5.2e-12 Score=74.55 Aligned_cols=53 Identities=13% Similarity=0.085 Sum_probs=47.1
Q ss_pred CChhhhhcCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhch
Q 033974 34 KDYYKILEVDYD---ATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQEKNGS 90 (107)
Q Consensus 34 ~~~y~iLgl~~~---a~~~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~ 90 (107)
...|.||||+++ ++.++|+++||+|....|||++++ .....+|+.|+++|...
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHH
Confidence 357899999998 999999999999999999999765 36777999999999765
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.12 E-value=5.4e-11 Score=87.86 Aligned_cols=66 Identities=33% Similarity=0.530 Sum_probs=56.7
Q ss_pred CCCChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHHhhchHHHHHHH
Q 033974 32 KPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDR---DCATSRFQEINEAYQEKNGSLILMVKI 97 (107)
Q Consensus 32 ~~~~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~~~ 97 (107)
...++|.+||+...++.++|+++|+++++++|||+.+.+ ..+.+.|..|.+||++|+||..|..|+
T Consensus 380 ~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd 448 (450)
T 2y4t_A 380 QKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFD 448 (450)
T ss_dssp HSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC----
T ss_pred cchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhcc
Confidence 456899999999999999999999999999999998875 358899999999999999998777554
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=91.02 E-value=0.16 Score=40.32 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=37.3
Q ss_pred hhcCCCChhhhhcCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHH
Q 033974 29 LLAKPKDYYKILEVDYDATE--EEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQE 86 (107)
Q Consensus 29 ~~~~~~~~y~iLgl~~~a~~--~~Ik~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~ 86 (107)
......++|.+||++-+... .+|+++||++++.-+++ .+.+..|..|+.+
T Consensus 624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 33456679999999766554 67999999999966554 3677777777654
No 37
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=59.63 E-value=23 Score=20.51 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=38.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHHhhchHHHH-HHHhH
Q 033974 43 DYDATEEEIRSNYIRLALKWHPDKQKDR--DCATSRFQEINEAYQEKNGSLILM-VKIKF 99 (107)
Q Consensus 43 ~~~a~~~~Ik~ayr~l~~~~HPDk~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~-~~~~~ 99 (107)
+...-...++..|+.+.+...|...... +.+...|..-. +|..+.++..|. +...|
T Consensus 3 ~~~~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 3 SGSSGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDF 61 (77)
T ss_dssp SCCCSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHH
Confidence 3445677899999999999887765554 44566666555 799998876544 34443
No 38
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=50.66 E-value=6.8 Score=25.59 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=28.1
Q ss_pred ChhhhhcCCCCCCHHHHHHHHHHHHHHhCCCC
Q 033974 35 DYYKILEVDYDATEEEIRSNYIRLALKWHPDK 66 (107)
Q Consensus 35 ~~y~iLgl~~~a~~~~Ik~ayr~l~~~~HPDk 66 (107)
-++..+.|....+.++++++=..+..++|||=
T Consensus 33 ~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 33 KLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 44777888889999999999999999999983
No 39
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=35.92 E-value=22 Score=21.67 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=24.5
Q ss_pred CChhhhhcCC-CCCCHHHHHHHHHHHHHHhCCCCCC
Q 033974 34 KDYYKILEVD-YDATEEEIRSNYIRLALKWHPDKQK 68 (107)
Q Consensus 34 ~~~y~iLgl~-~~a~~~~Ik~ayr~l~~~~HPDk~~ 68 (107)
.+.|..|--. .+-++++|+..|+.|++.+|--+..
T Consensus 55 ~~tFa~iA~~L~Nks~nqV~~RFq~Lm~Lf~~~~~~ 90 (95)
T 1ug2_A 55 PHTFSVISQQLGNKTPVEVSHRFRELMQLFHTACES 90 (95)
T ss_dssp TTTHHHHHHHHSSCCHHHHHHHHHHHHHHHHHCSSS
T ss_pred hhHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHhcc
Confidence 4444443322 2568999999999999999866543
No 40
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=30.89 E-value=41 Score=19.12 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=18.2
Q ss_pred hhcCCCCCCHHHHHHHHHHHH
Q 033974 39 ILEVDYDATEEEIRSNYIRLA 59 (107)
Q Consensus 39 iLgl~~~a~~~~Ik~ayr~l~ 59 (107)
|=||+.+++.++|+..|....
T Consensus 6 v~nLp~~~te~~l~~~F~~~G 26 (91)
T 2lxi_A 6 LRMLPQAATEDDIRGQLQSHG 26 (91)
T ss_dssp EETCCSSCCHHHHHHHHHHHT
T ss_pred EeCCCCCCCHHHHHHHHHHhC
Confidence 348999999999999998875
No 41
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=28.43 E-value=18 Score=20.88 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCC
Q 033974 45 DATEEEIRSNYIRLALKWHPDKQ 67 (107)
Q Consensus 45 ~a~~~~Ik~ayr~l~~~~HPDk~ 67 (107)
+-++++|+..|+.|+..+|-.|+
T Consensus 47 nks~~QV~~RF~~Lm~Lf~kSk~ 69 (70)
T 2lr8_A 47 DKNPNQVSERFQQLMKLFEKSKC 69 (70)
Confidence 45788899999999888876553
No 42
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=22.55 E-value=77 Score=16.70 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=17.1
Q ss_pred hcCCCCCCHHHHHHHHHHHH
Q 033974 40 LEVDYDATEEEIRSNYIRLA 59 (107)
Q Consensus 40 Lgl~~~a~~~~Ik~ayr~l~ 59 (107)
=||+..++.++|+..|.+..
T Consensus 5 ~nLp~~~t~~~l~~~F~~~G 24 (75)
T 1iqt_A 5 GGLSPDTPEEKIREYFGGFG 24 (75)
T ss_dssp SCCCSSCCHHHHHHHHHHHS
T ss_pred eCCCCCCCHHHHHHHHHhcC
Confidence 37889999999999998863
No 43
>3cxb_A Protein SIFA; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Salmonella typhimurium} PDB: 3hw2_A
Probab=20.08 E-value=1.4e+02 Score=22.05 Aligned_cols=30 Identities=17% Similarity=0.122 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHH
Q 033974 52 RSNYIRLALKWHPDKQKDRDCATSRFQEIN 81 (107)
Q Consensus 52 k~ayr~l~~~~HPDk~~~~~~a~~~f~~i~ 81 (107)
.+|..-+...+||+....++.....|.++.
T Consensus 44 aEAl~CI~eLcHp~~~~TrE~v~~~F~~LK 73 (336)
T 3cxb_A 44 AKADRCLHEMLFAERAPTRERLTEIFFELK 73 (336)
T ss_dssp HHHHHHHHHHHSSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 467788888999998777665565555554
Done!