BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033975
         (107 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2HT9|A Chain A, The Structure Of Dimeric Human Glutaredoxin 2
 pdb|2HT9|B Chain B, The Structure Of Dimeric Human Glutaredoxin 2
          Length = 146

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 30/45 (66%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELDLRVY 84
          +Q +I  N +VIFSK+ C YC  AK++F D+N    VVELDL  Y
Sbjct: 42 IQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEY 86


>pdb|2FLS|A Chain A, Crystal Structure Of Human Glutaredoxin 2 Complexed With
          Glutathione
          Length = 132

 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELDLRVYS 85
          +Q +I  N +VIFSK+ C YC  AK++F D+N    VVELDL  Y 
Sbjct: 28 IQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYG 73


>pdb|2CQ9|A Chain A, Solution Structure Of Rsgi Ruh-044, An N-Terminal Domain
          Of Glutaredoxin 2 From Human Cdna
          Length = 130

 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELDLRVYS 85
          +Q +I  N +VIFSK+ C YC  AK++F D+N    VVELDL  Y 
Sbjct: 20 IQETISDNCVVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYG 65


>pdb|3RHB|A Chain A, Crystal Structure Of The Apo Form Of Glutaredoxin C5
          From Arabidopsis Thaliana
 pdb|3RHC|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C5
          From Arabidopsis Thaliana
 pdb|3RHC|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C5
          From Arabidopsis Thaliana
          Length = 113

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          ++ ++  N +VI+SK++C YC   K +F  L  QP VVELD
Sbjct: 12 IRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELD 52


>pdb|3FZ9|A Chain A, Crystal Structure Of Poplar Glutaredoxin S12 In Complex
          With Glutathione
 pdb|3FZA|A Chain A, Crystal Structure Of Poplar Glutaredoxin S12 In Complex
          With Glutathione And Beta-Mercaptoethanol
          Length = 112

 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 26/41 (63%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          V+ ++  N +V++SK++C Y    K +F  LN  P VVELD
Sbjct: 11 VKKTVAENPVVVYSKTWCSYSSEVKSLFKRLNVDPLVVELD 51


>pdb|3H8Q|A Chain A, Crystal Structure Of Glutaredoxin Domain Of Human
          Thioredoxin Reductase 3
 pdb|3H8Q|B Chain B, Crystal Structure Of Glutaredoxin Domain Of Human
          Thioredoxin Reductase 3
          Length = 114

 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%)

Query: 44 IFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          I  +++VIFSKSYCP+  R K +F+ L  +  V+ELD
Sbjct: 14 IERSRVVIFSKSYCPHSTRVKELFSSLGVECNVLELD 50


>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma
          Mansoni With The Reduced C-Terminal End
 pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma
          Mansoni With The Reduced C-Terminal End
 pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
          Schistosoma Mansoni
 pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma
          Mansoni In Complex With Gsh
 pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma
          Mansoni In Complex With Nadph
          Length = 598

 Score = 38.1 bits (87), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 37 SAFVQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          S +++ ++ S  +++FSK+ CPYC + K + A+   +   +ELD
Sbjct: 8  SQWLRKTVDSAAVILFSKTTCPYCKKVKDVLAEAKIKHATIELD 51


>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin
          Glutatione Reductase From Schistosoma Mansoni In
          Complex With Auranofin
          Length = 598

 Score = 38.1 bits (87), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 37 SAFVQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          S +++ ++ S  +++FSK+ CPYC + K + A+   +   +ELD
Sbjct: 8  SQWLRKTVDSAAVILFSKTTCPYCKKVKDVLAEAKIKHATIELD 51


>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
          Reductase (Smtgr)
          Length = 596

 Score = 38.1 bits (87), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 28/44 (63%)

Query: 37 SAFVQNSIFSNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          S +++ ++ S  +++FSK+ CPYC + K + A+   +   +ELD
Sbjct: 8  SQWLRKTVDSAAVILFSKTTCPYCKKVKDVLAEAKIKHATIELD 51


>pdb|2E7P|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C1
          From Populus Tremula X Tremuloides
 pdb|2E7P|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C1
          From Populus Tremula X Tremuloides
 pdb|2E7P|C Chain C, Crystal Structure Of The Holo Form Of Glutaredoxin C1
          From Populus Tremula X Tremuloides
 pdb|2E7P|D Chain D, Crystal Structure Of The Holo Form Of Glutaredoxin C1
          From Populus Tremula X Tremuloides
          Length = 116

 Score = 38.1 bits (87), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 46 SNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          S  +V+FSK+YC YC R K++   +     VVELD
Sbjct: 19 SAPVVVFSKTYCGYCNRVKQLLTQVGASYKVVELD 53


>pdb|1Z7P|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From
          Populus Tremula X Tremuloides
 pdb|1Z7R|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From
          Populus Tremula X Tremuloides
          Length = 117

 Score = 37.7 bits (86), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 46 SNKIVIFSKSYCPYCLRAKRIFADLNEQPFVVELD 80
          S  +V+FSK+YC YC R K++   +     VVELD
Sbjct: 20 SAPVVVFSKTYCGYCNRVKQLLTQVGASYKVVELD 54


>pdb|1JHB|A Chain A, Human Glutaredoxin In Fully Reduced Form, Nmr, 20
          Structures
          Length = 106

 Score = 35.4 bits (80), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 39 FVQNSIFSNKIVIFSKSYCPYCLRAKRIFADL 70
          FV   I   K+V+F K  CPYC RA+ I + L
Sbjct: 5  FVNCKIQPGKVVVFIKPTCPYCRRAQEILSQL 36


>pdb|1B4Q|A Chain A, Solution Structure Of Human Thioltransferase Complex
          With Glutathione
          Length = 105

 Score = 33.5 bits (75), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 39 FVQNSIFSNKIVIFSKSYCPYCLRAKRIFADL 70
          FV + I   K+V+F K  CPY  RA+ I + L
Sbjct: 4  FVNSKIQPGKVVVFIKPTCPYSRRAQEILSQL 35


>pdb|1KTE|A Chain A, Crystal Structure Of Thioltransferase At 2.2 Angstrom
          Resolution
          Length = 105

 Score = 33.1 bits (74), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 37 SAFVQNSIFSNKIVIFSKSYCPYCLRAKRIFADL 70
           AFV + I   K+V+F K  CP+C + + + + L
Sbjct: 2  QAFVNSKIQPGKVVVFIKPTCPFCRKTQELLSQL 35


>pdb|1NM3|A Chain A, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
 pdb|1NM3|B Chain B, Crystal Structure Of Heamophilus Influenza Hybrid-prx5
          Length = 241

 Score = 32.3 bits (72), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 3   KRGWQSRFLVEAVGLLFFLLLGNAP----TATEADHSVSAFVQNSIFSNKIVIFSKSYCP 58
           KR W+   LV+   +    +  N P      ++AD  +            I IF+K  CP
Sbjct: 122 KRSWRYSXLVKNGVVEKXFIEPNEPGDPFKVSDADTXLKYLAPQHQVQESISIFTKPGCP 181

Query: 59  YCLRAKRIFAD 69
           +C +AK++  D
Sbjct: 182 FCAKAKQLLHD 192


>pdb|1FO5|A Chain A, Solution Structure Of Reduced Mj0307
          Length = 85

 Score = 32.3 bits (72), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 48 KIVIFSKSYCPYCLRAKRIFADL-NEQPFVVELD 80
          KI +F+   CP+C  AKR+  ++ NE P  VE++
Sbjct: 5  KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVE 38


>pdb|3CTF|A Chain A, Crystal Structure Of Oxidized Grx2
 pdb|3CTG|A Chain A, Crystal Structure Of Reduced Glutaredoxin 2
          Length = 129

 Score = 31.2 bits (69), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 38 AFVQNSIFSNKIVIFSKSYCPYCLRA-KRIFADLN---EQPFVVELD 80
          A V++ I   ++ + +K+YCPYC      +F +LN    +  V+ELD
Sbjct: 28 AHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELD 74


>pdb|1EGO|A Chain A, Nmr Structure Of Oxidized Escherichia Coli Glutaredoxin:
          Comparison With Reduced E. Coli Glutaredoxin And
          Functionally Related Proteins
 pdb|1EGR|A Chain A, Sequence-Specific 1h N.M.R. Assignments And
          Determination Of The Three-Dimensional Structure Of
          Reduced Escherichia Coli Glutaredoxin
          Length = 85

 Score = 31.2 bits (69), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 48 KIVIFSKSYCPYCLRAKRIFADLNEQ 73
          + VIF +S CPYC+RAK +   L+ +
Sbjct: 2  QTVIFGRSGCPYCVRAKDLAEKLSNE 27


>pdb|3D4M|A Chain A, Glutaredoxin 2 Oxidized Structure
          Length = 109

 Score = 30.8 bits (68), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 38 AFVQNSIFSNKIVIFSKSYCPYCLRA-KRIFADLN---EQPFVVELD 80
          A V++ I   ++ + +K+YCPYC      +F +LN    +  V+ELD
Sbjct: 8  AHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELNVPKSKALVLELD 54


>pdb|2HZE|A Chain A, Crystal Structures Of A Poxviral Glutaredoxin In The
          Oxidized And Reduced States Show Redox-Correlated
          Structural Changes
 pdb|2HZF|A Chain A, Crystal Structures Of A Poxviral Glutaredoxin In The
          Oxidized And Reduced States Show Redox-Correlated
          Structural Changes
 pdb|2HZF|B Chain B, Crystal Structures Of A Poxviral Glutaredoxin In The
          Oxidized And Reduced States Show Redox-Correlated
          Structural Changes
          Length = 114

 Score = 30.8 bits (68), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 39 FVQNSIFSNKIVIFSKSYCPYCLRAKRIF 67
          FVQ  + +NK+ IF K  CP+C  A  I 
Sbjct: 11 FVQQRLANNKVTIFVKYTCPFCRNALDIL 39


>pdb|3C1R|A Chain A, Crystal Structure Of Oxidized Grx1
 pdb|3C1S|A Chain A, Crystal Structure Of Grx1 In Glutathionylated Form
          Length = 118

 Score = 30.4 bits (67), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 40 VQNSIFSNKIVIFSKSYCPYCLRA 63
          V++ I  N+I + SK+YCPYC  A
Sbjct: 18 VKDLIAENEIFVASKTYCPYCHAA 41


>pdb|2KHP|A Chain A, Solution Structure Of Glutaredoxin From Brucella
          Melitensis
          Length = 92

 Score = 29.6 bits (65), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 49 IVIFSKSYCPYCLRAKRIFA 68
          ++I+++  CPYC RAK + A
Sbjct: 8  VIIYTRPGCPYCARAKALLA 27


>pdb|1QFN|A Chain A, Glutaredoxin-1-Ribonucleotide Reductase B1 Mixed
          Disulfide Bond
 pdb|1GRX|A Chain A, Structure Of E. Coli Glutaredoxin
          Length = 85

 Score = 28.1 bits (61), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 48 KIVIFSKSYCPYCLRAKRIFADLNEQ 73
          + VIF +S CPY +RAK +   L+ +
Sbjct: 2  QTVIFGRSGCPYSVRAKDLAEKLSNE 27


>pdb|3D5J|A Chain A, Structure Of Yeast Grx2-C30s Mutant With Glutathionyl
          Mixed Disulfide
 pdb|3D5J|B Chain B, Structure Of Yeast Grx2-C30s Mutant With Glutathionyl
          Mixed Disulfide
          Length = 112

 Score = 27.7 bits (60), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 38 AFVQNSIFSNKIVIFSKSYCPYCLRA-KRIFADLN---EQPFVVELD 80
          A V++ I   ++ + +K+YCPY       +F +LN    +  V+ELD
Sbjct: 11 AHVKDLIGQKEVFVAAKTYCPYSKATLSTLFQELNVPKSKALVLELD 57


>pdb|3GV1|A Chain A, Crystal Structure Of Disulfide Interchange Protein From
          Neisseria Gonorrhoeae
 pdb|3GV1|B Chain B, Crystal Structure Of Disulfide Interchange Protein From
          Neisseria Gonorrhoeae
 pdb|3GV1|C Chain C, Crystal Structure Of Disulfide Interchange Protein From
          Neisseria Gonorrhoeae
          Length = 147

 Score = 27.3 bits (59), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 8/39 (20%)

Query: 48 KIVIFSKSYCPYCLRAKRIFADLNEQPFVVELDLRVYSF 86
          K+ +FS   CP+C R         E  F    D+ VYSF
Sbjct: 17 KVAVFSDPDCPFCKRL--------EHEFEKXTDVTVYSF 47


>pdb|2JAD|A Chain A, Yellow Fluorescent Protein - Glutaredoxin Fusion Protein
          Length = 362

 Score = 27.3 bits (59), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 40  VQNSIFSNKIVIFSKSYCPY 59
           V++ I  N+I + SK+YCPY
Sbjct: 254 VKDLIAENEIFVASKTYCPY 273


>pdb|1FOV|A Chain A, Glutaredoxin 3 From Escherichia Coli In The Fully
          Oxidized Form
          Length = 82

 Score = 27.3 bits (59), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 49 IVIFSKSYCPYCLRAKRIFA 68
          + I++K  CPYC RAK + +
Sbjct: 3  VEIYTKETCPYCHRAKALLS 22


>pdb|2JAC|A Chain A, Glutaredoxin Grx1p C30s Mutant From Yeast
          Length = 110

 Score = 26.9 bits (58), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 10/21 (47%), Positives = 15/21 (71%)

Query: 40 VQNSIFSNKIVIFSKSYCPYC 60
          V++ I  N+I + SK+YCPY 
Sbjct: 10 VKDLIAENEIFVASKTYCPYS 30


>pdb|2HZE|B Chain B, Crystal Structures Of A Poxviral Glutaredoxin In The
          Oxidized And Reduced States Show Redox-Correlated
          Structural Changes
          Length = 114

 Score = 26.9 bits (58), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 39 FVQNSIFSNKIVIFSKSYCPYCLRAKRIF 67
          FVQ  + +NK+ IF K   P+C  A  I 
Sbjct: 11 FVQQRLANNKVTIFVKYTXPFCRNALDIL 39


>pdb|3LGC|A Chain A, Crystal Structure Of Glutaredoxin 1 From Francisella
          Tularensis
 pdb|3MSZ|A Chain A, Crystal Structure Of Glutaredoxin 1 From Francisella
          Tularensis Complexed With Cacodylate
 pdb|3MSZ|B Chain B, Crystal Structure Of Glutaredoxin 1 From Francisella
          Tularensis Complexed With Cacodylate
          Length = 89

 Score = 26.6 bits (57), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 10/24 (41%), Positives = 18/24 (75%)

Query: 48 KIVIFSKSYCPYCLRAKRIFADLN 71
          K+ I++++ CPYC+ AK+ F + N
Sbjct: 5  KVKIYTRNGCPYCVWAKQWFEENN 28


>pdb|1G7O|A Chain A, Nmr Solution Structure Of Reduced E. Coli Glutaredoxin 2
          Length = 215

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 8/14 (57%), Positives = 11/14 (78%)

Query: 55 SYCPYCLRAKRIFA 68
           +CPYCL+A+ IF 
Sbjct: 7  DHCPYCLKARMIFG 20


>pdb|3QMX|A Chain A, X-Ray Crystal Structure Of Synechocystis Sp. Pcc 6803
          Glutaredoxin A
          Length = 99

 Score = 26.6 bits (57), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 42 NSIFSNKIVIFSKSYCPYCLRA 63
           S  S KI I++ S CP+C+RA
Sbjct: 11 GSAVSAKIEIYTWSTCPFCMRA 32


>pdb|2KLX|A Chain A, Solution Structure Of Glutaredoxin From Bartonella
          Henselae Str. Houston
          Length = 89

 Score = 26.2 bits (56), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 7/20 (35%), Positives = 15/20 (75%)

Query: 48 KIVIFSKSYCPYCLRAKRIF 67
          +I+++++  CPYC RA+ + 
Sbjct: 7  EIILYTRPNCPYCKRARDLL 26


>pdb|3IR4|A Chain A, 1.2 Angstrom Crystal Structure Of The Glutaredoxin 2
          (Grxb) From Salmonella Typhimurium In Complex With
          Glutathione
          Length = 218

 Score = 25.8 bits (55), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 46 SNKIVIFSKSYCPYCLRAKRIFA 68
          SN   ++   +CP+C++A+ IF 
Sbjct: 1  SNAXKLYIYDHCPFCVKARXIFG 23


>pdb|1WJK|A Chain A, Solution Structure Of Hypothetical Protein C330018d20rik
          From Mus Musculus
          Length = 100

 Score = 25.8 bits (55), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 49 IVIFSKSYCPYCLRAKRIFADLNEQPFVVELDL 81
          + +F+K+ CP C  AK +     ++  + E+D+
Sbjct: 19 LTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDI 51


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.327    0.138    0.466 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,011,604
Number of Sequences: 62578
Number of extensions: 94754
Number of successful extensions: 270
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 36
length of query: 107
length of database: 14,973,337
effective HSP length: 72
effective length of query: 35
effective length of database: 10,467,721
effective search space: 366370235
effective search space used: 366370235
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 45 (21.9 bits)