Your job contains 1 sequence.
>033976
MDTSNPAVFVNGGLMRMYVGRRIRTVIQVIQSDGGGVTGKSTDGHQLVVKGPQPGFPLTT
FVEVIGIADTDRSIRAEIWNNFGNTFDTQSYNQLCQLANGEFKHLFI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 033976
(107 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2124583 - symbol:AT4G18590 "AT4G18590" species... 399 3.9e-37 1
TAIR|locus:2083198 - symbol:AT3G52630 "AT3G52630" species... 391 2.7e-36 1
UNIPROTKB|Q9SDK9 - symbol:P0705D01.4 "cDNA clone:001-004-... 316 2.4e-28 1
FB|FBgn0030322 - symbol:CG15220 species:7227 "Drosophila ... 130 1.2e-08 1
>TAIR|locus:2124583 [details] [associations]
symbol:AT4G18590 "AT4G18590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K10740
InterPro:IPR013970 Pfam:PF08661 eggNOG:NOG75610 EMBL:BT012205
EMBL:BT012366 IPI:IPI00538075 RefSeq:NP_567560.2 UniGene:At.32888
ProteinModelPortal:Q6NLG7 STRING:Q6NLG7 PaxDb:Q6NLG7 PRIDE:Q6NLG7
DNASU:827591 EnsemblPlants:AT4G18590.1 GeneID:827591
KEGG:ath:AT4G18590 TAIR:At4g18590 HOGENOM:HOG000265081
InParanoid:Q6NLG7 OMA:IWTNFGD PhylomeDB:Q6NLG7
ProtClustDB:CLSN2684783 Genevestigator:Q6NLG7 Uniprot:Q6NLG7
Length = 106
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 74/108 (68%), Positives = 93/108 (86%)
Query: 1 MDTSNPAVFVNGGLMRMYVGRRIRTVIQVIQSDGGGVTGKSTDGHQLVVKG-PQPGFPLT 59
MDTS+PA FVNG L+R Y+G+++R VIQVI+SD G V GKSTD Q+VVKG PQP PLT
Sbjct: 1 MDTSSPAAFVNGALLRRYIGQKVRAVIQVIRSDVGSVIGKSTDDQQIVVKGSPQP--PLT 58
Query: 60 TFVEVIGIADTDRSIRAEIWNNFGNTFDTQSYNQLCQLANGEFKHLFI 107
T++EVIGIA+TD +IRAE+W NFG++FD Q+YN+LC+LANGEF+HLFI
Sbjct: 59 TYLEVIGIAETDNTIRAEVWTNFGDSFDVQNYNELCKLANGEFRHLFI 106
>TAIR|locus:2083198 [details] [associations]
symbol:AT3G52630 "AT3G52630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL353912
KO:K10740 InterPro:IPR013970 Pfam:PF08661 eggNOG:NOG75610
HOGENOM:HOG000265081 ProtClustDB:CLSN2684783 IPI:IPI00534247
PIR:T49016 RefSeq:NP_001078273.1 RefSeq:NP_190831.1
UniGene:At.53905 ProteinModelPortal:Q9LXK1 IntAct:Q9LXK1
PaxDb:Q9LXK1 PRIDE:Q9LXK1 EnsemblPlants:AT3G52630.1
EnsemblPlants:AT3G52630.2 GeneID:824429 KEGG:ath:AT3G52630
TAIR:At3g52630 InParanoid:Q9LXK1 OMA:AIRAETW PhylomeDB:Q9LXK1
Genevestigator:Q9LXK1 Uniprot:Q9LXK1
Length = 107
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 71/107 (66%), Positives = 90/107 (84%)
Query: 1 MDTSNPAVFVNGGLMRMYVGRRIRTVIQVIQSDGGGVTGKSTDGHQLVVKGPQPGFPLTT 60
MDTS+P+ FVNG L+R ++G+++RTVIQV S+ G V GKSTD Q+VV+G P PLTT
Sbjct: 1 MDTSSPSAFVNGALLRRFIGQKVRTVIQVTGSEIGSVVGKSTDDLQIVVRGSSPPSPLTT 60
Query: 61 FVEVIGIADTDRSIRAEIWNNFGNTFDTQSYNQLCQLANGEFKHLFI 107
++EVIGIA++D +IRAE W NFGNTFDTQ+YN+LC+LANGEFKHLFI
Sbjct: 61 YLEVIGIAESDNAIRAETWTNFGNTFDTQNYNELCKLANGEFKHLFI 107
>UNIPROTKB|Q9SDK9 [details] [associations]
symbol:P0705D01.4 "cDNA clone:001-004-D02, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005515
"protein binding" evidence=IPI] Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP008207 EMBL:CM000138
KO:K10740 InterPro:IPR013970 Pfam:PF08661 eggNOG:NOG75610
OMA:IWTNFGD EMBL:AP000492 EMBL:AB111915 EMBL:AK058837
RefSeq:NP_001042613.1 UniGene:Os.3924 IntAct:Q9SDK9
EnsemblPlants:LOC_Os01g14980.1 EnsemblPlants:LOC_Os01g14980.2
GeneID:4327706 KEGG:osa:4327706 Uniprot:Q9SDK9
Length = 106
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 57/107 (53%), Positives = 82/107 (76%)
Query: 1 MDTSNPAVFVNGGLMRMYVGRRIRTVIQVIQSDGGGVTGKSTDGHQLVVKGPQPGFPLTT 60
MDTS PA FVNG +++M+VGRR+RTV+Q + +GG + G+STDGHQL +KG G P++
Sbjct: 1 MDTSGPAAFVNGEILKMFVGRRVRTVVQAQREEGGLLIGQSTDGHQLTIKGAS-GAPMSH 59
Query: 61 FVEVIGIADTDRSIRAEIWNNFGNTFDTQSYNQLCQLANGEFKHLFI 107
+VE+IGIA+ +++IRAE+ +FG FD +N LC+LANG+ K LF+
Sbjct: 60 YVEIIGIAEPNQAIRAEVCTDFGENFDPAPFNGLCKLANGQMKDLFL 106
>FB|FBgn0030322 [details] [associations]
symbol:CG15220 species:7227 "Drosophila melanogaster"
[GO:0005662 "DNA replication factor A complex" evidence=NAS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
GO:GO:0022008 EMBL:AE014298 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K10740 InterPro:IPR013970 Pfam:PF08661
EMBL:AY113602 RefSeq:NP_572737.1 UniGene:Dm.20551 HSSP:P35244
SMR:Q9VYW3 IntAct:Q9VYW3 MINT:MINT-943338 STRING:Q9VYW3
EnsemblMetazoa:FBtr0073535 GeneID:32113 KEGG:dme:Dmel_CG15220
UCSC:CG15220-RA FlyBase:FBgn0030322 eggNOG:NOG75610
InParanoid:Q9VYW3 OMA:IMVRVES OrthoDB:EOG4SQVD8 GenomeRNAi:32113
NextBio:776903 Uniprot:Q9VYW3
Length = 112
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 32/103 (31%), Positives = 52/103 (50%)
Query: 1 MDTSNPAVFVNGGLMRMYVGRRIRTVIQVIQSDGGGVTGKSTDGHQLVVKGP-QPGFPLT 59
MD +P +NGG+++ + G+ + +++V G + STD H+L + P + G
Sbjct: 1 MDAFDPRSIINGGMLKQFSGQTVSIMVRVESVAGSTLLASSTDNHKLKINLPGELGAAEG 60
Query: 60 TFVEVIGIADTDRSIRAEIWNNFGNT---FDTQSYNQLCQLAN 99
+VEVIG+ ++RA+ FG FD YN L L N
Sbjct: 61 AWVEVIGVPHGADTLRAKEVIEFGGENIDFDKDGYNGLSHLIN 103
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 107 107 0.00091 102 3 11 22 0.42 30
29 0.40 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 561 (60 KB)
Total size of DFA: 118 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.98u 0.09s 11.07t Elapsed: 00:00:02
Total cpu time: 10.98u 0.09s 11.07t Elapsed: 00:00:02
Start: Fri May 10 10:12:43 2013 End: Fri May 10 10:12:45 2013