BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033976
(107 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4WQ08|ADMB_ASPFU Disintegrin and metalloproteinase domain-containing protein B
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=ADM-B PE=3 SV=2
Length = 785
Score = 28.9 bits (63), Expect = 9.4, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 31 QSDGGGVTGKSTDGHQLVVKGPQPGFPLTTFVEVIGIADTDRSIRAEIWNN 81
QSD GGV+G + + G G P T V ++GIA D S RA N+
Sbjct: 250 QSDIGGVSGNAGGVNLAQTIGSTSGCPKTKQVALVGIA-ADCSFRASFDND 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,398,983
Number of Sequences: 539616
Number of extensions: 1700980
Number of successful extensions: 3192
Number of sequences better than 100.0: 1
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3192
Number of HSP's gapped (non-prelim): 1
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)