BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033978
         (107 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q02921|NO93_SOYBN Early nodulin-93 OS=Glycine max PE=2 SV=1
          Length = 105

 Score =  150 bits (378), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/107 (85%), Positives = 94/107 (87%), Gaps = 2/107 (1%)

Query: 1   MAKNVAQSPLERTSLASLDHKLAMAKRCSHEGVIAGAKAAVVATVATAIPTLASVRMLPW 60
           MAK    SPLER SLASLD KLA AKRCSHEGV+AGAKAAVVA+VA+AIPTLASVRMLPW
Sbjct: 1   MAK--GNSPLERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPW 58

Query: 61  ARANLNHTAQALIISTVAGAAYFIVADKTVLATARKNSFQQASNMEA 107
           ARANLNHTAQALIIST   AAYFIVADKTVLATARKNSF Q SN EA
Sbjct: 59  ARANLNHTAQALIISTATAAAYFIVADKTVLATARKNSFNQPSNSEA 105


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.121    0.328 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,785,867
Number of Sequences: 539616
Number of extensions: 698751
Number of successful extensions: 2103
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2100
Number of HSP's gapped (non-prelim): 7
length of query: 107
length of database: 191,569,459
effective HSP length: 75
effective length of query: 32
effective length of database: 151,098,259
effective search space: 4835144288
effective search space used: 4835144288
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)