BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>033982
MVAIDESEQSHYALMWVLDNLKESISKFPLIIFMAQPPTKSEFVFTAPFGYARLYSSALT
TQGFVNCAEEKQRKLTLAFLQKVKDILSSQGVKAEMIVEVWDPTMAI

High Scoring Gene Products

Symbol, full name Information P value
AT3G25930 protein from Arabidopsis thaliana 3.5e-11
AT1G68300 protein from Arabidopsis thaliana 8.7e-08
AT1G09740 protein from Arabidopsis thaliana 2.9e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033982
        (107 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2092170 - symbol:AT3G25930 "AT3G25930" species...   154  3.5e-11   1
TAIR|locus:2199282 - symbol:AT1G68300 "AT1G68300" species...   122  8.7e-08   1
TAIR|locus:2024291 - symbol:AT1G09740 "AT1G09740" species...   117  2.9e-07   1


>TAIR|locus:2092170 [details] [associations]
            symbol:AT3G25930 "AT3G25930" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000041 "transition metal ion
            transport" evidence=RCA] [GO:0002238 "response to molecule of
            fungal origin" evidence=RCA] [GO:0006826 "iron ion transport"
            evidence=RCA] [GO:0010106 "cellular response to iron ion
            starvation" evidence=RCA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR006016 Pfam:PF00582 EMBL:CP002686 EMBL:AB023041
            GO:GO:0006950 Gene3D:3.40.50.620 InterPro:IPR014729
            HOGENOM:HOG000238898 EMBL:BT004793 EMBL:AK227799 IPI:IPI00538831
            RefSeq:NP_566785.1 UniGene:At.43750 ProteinModelPortal:Q9LU98
            IntAct:Q9LU98 EnsemblPlants:AT3G25930.1 GeneID:822190
            KEGG:ath:AT3G25930 TAIR:At3g25930 InParanoid:Q9LU98 OMA:IWALENQ
            PhylomeDB:Q9LU98 ProtClustDB:CLSN2917268 Genevestigator:Q9LU98
            Uniprot:Q9LU98
        Length = 154

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query:     1 MVAIDESEQSHYALMWVLDNLKESISKFPLIIFMAQPPTK--SEFVFTAPFGYARLYSSA 58
             M+ IDES  S+  L+W L+N K++I    + IF  QP        V ++  G+A+++   
Sbjct:     5 MLIIDESNASYDLLIWALENQKDTIESSKVYIFAKQPQNSFTPPTVLSSSVGFAQIFYPF 64

Query:    59 LTTQGFVNCAEEKQRKLTLAFLQKVKDILSSQGVKAEMIVEVWDP 103
                   +  A+EK  K+ L  L+K K I  + G+KAE   +  DP
Sbjct:    65 SPNSELIRLAQEKNMKIALGILEKAKKICLNHGIKAETFTDDGDP 109


>TAIR|locus:2199282 [details] [associations]
            symbol:AT1G68300 "AT1G68300" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0002238 "response to molecule of
            fungal origin" evidence=RCA] InterPro:IPR006016 Pfam:PF00582
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950 EMBL:AC016447
            Gene3D:3.40.50.620 InterPro:IPR014729 UniGene:At.35544
            UniGene:At.43330 eggNOG:COG0589 InterPro:IPR006015 PRINTS:PR01438
            HOGENOM:HOG000238898 EMBL:AY086731 EMBL:BT005207 EMBL:AK228062
            IPI:IPI00535411 PIR:F96706 RefSeq:NP_564927.1 HSSP:Q57997
            ProteinModelPortal:Q9C9G5 SMR:Q9C9G5 IntAct:Q9C9G5 STRING:Q9C9G5
            PaxDb:Q9C9G5 PRIDE:Q9C9G5 EnsemblPlants:AT1G68300.1 GeneID:843159
            KEGG:ath:AT1G68300 TAIR:At1g68300 InParanoid:Q9C9G5 OMA:NYCVNNA
            PhylomeDB:Q9C9G5 ProtClustDB:CLSN2917403 Genevestigator:Q9C9G5
            Uniprot:Q9C9G5
        Length = 160

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 35/107 (32%), Positives = 52/107 (48%)

Query:     1 MVAIDESEQSHYALMWVLDNLKESISKFPLIIFMAQPPTKSEFVFTAPFGYARLYSSALT 60
             MVAIDESE S  AL W L  LK+S++   +I+F AQP      V+ + +G A +      
Sbjct:    13 MVAIDESECSKRALQWTLVYLKDSLADSDIILFTAQPHLDLSCVYASSYGAAPIE----- 67

Query:    61 TQGFVNCAEEKQRKLTLAFLQKVKDILSSQGVKAEMIVEVWDPTMAI 107
                 +N  +E  +   L  L +   I +  GV    ++E  +P  AI
Sbjct:    68 ---LINSLQESHKNAGLNRLDEGTKICAETGVTPRKVLEFGNPKEAI 111


>TAIR|locus:2024291 [details] [associations]
            symbol:AT1G09740 "AT1G09740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0002238 "response to molecule of
            fungal origin" evidence=RCA] [GO:0006826 "iron ion transport"
            evidence=RCA] [GO:0010106 "cellular response to iron ion
            starvation" evidence=RCA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR006016 Pfam:PF00582 EMBL:CP002684 GO:GO:0006950
            GO:GO:0016787 Gene3D:3.40.50.620 InterPro:IPR014729
            InterPro:IPR006015 PRINTS:PR01438 EMBL:BT005843 EMBL:AK228228
            IPI:IPI00536336 RefSeq:NP_172445.2 UniGene:At.21292
            ProteinModelPortal:Q84TF6 SMR:Q84TF6 PRIDE:Q84TF6
            EnsemblPlants:AT1G09740.1 GeneID:837502 KEGG:ath:AT1G09740
            TAIR:At1g09740 InParanoid:Q84TF6 OMA:RHILEPA PhylomeDB:Q84TF6
            ProtClustDB:CLSN2690836 Genevestigator:Q84TF6 Uniprot:Q84TF6
        Length = 171

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 37/112 (33%), Positives = 52/112 (46%)

Query:     1 MVAIDESEQSHYALMWVLDNLK--ESISKFPLIIFMAQP-PTKSEFVF--TAPFGYARLY 55
             +VA+D SE S  AL W LDNLK   S S    ++   QP P+ +  V   T PFG     
Sbjct:    11 VVAVDGSEVSMEALRWALDNLKLSSSSSDSSFVVLHVQPSPSVAAGVSPGTIPFGGP--- 67

Query:    56 SSALTTQGFVNCAEEKQRKLTLAFLQKVKDILSSQGVKAEMIVEVWDPTMAI 107
              S L    F    E+ Q+++T   L+    I + + V  +  V + DP   I
Sbjct:    68 -SGLEVPAFTAAIEQHQKRITDTILEHASQICAEKSVNVKTQVVIGDPKYKI 118


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      107       107   0.00091  102 3  11 22  0.39    30
                                                     29  0.40    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  117 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.72u 0.10s 10.82t   Elapsed:  00:00:01
  Total cpu time:  10.72u 0.10s 10.82t   Elapsed:  00:00:01
  Start:  Fri May 10 10:23:14 2013   End:  Fri May 10 10:23:15 2013

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