AmiGO: BLAST Results


BLAST match view associations BLAST with KIWI KIWI KIWI AT5G09250	protein from Arabidopsis thaliana	8.5e-33
BLAST match view associations BLAST with AT5G09240 AT5G09240 AT5G09240	protein from Arabidopsis thaliana	1.1e-20
BLAST match view associations BLAST with KELP KELP KELP AT4G10920	protein from Arabidopsis thaliana	3.3e-13
BLAST match view associations BLAST with sub1a sub1a sub1a SUB1 homolog a (S. cerevisiae)	gene_product from Danio rerio	9.1e-13
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Canis lupus familiaris	2.2e-12
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Activated RNA polymerase II transcriptional coactivator p15	protein from Gallus gallus	1.3e-11
BLAST match view associations BLAST with Sub1 Sub1 Sub1 SUB1 homolog (S. cerevisiae)	protein from Mus musculus	5.8e-11
BLAST match view associations BLAST with Sub1 Sub1 Sub1 SUB1 homolog (S. cerevisiae)	gene from Rattus norvegicus	5.8e-11
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Bos taurus	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with LOC479283 LOC479283 LOC479283 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with J9P938 J9P938 J9P938 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Activated RNA polymerase II transcriptional coactivator p15	protein from Homo sapiens	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Sus scrofa	1.2e-10
BLAST match view associations BLAST with sub1b sub1b sub1b SUB1 homolog b (S. cerevisiae)	gene_product from Danio rerio	2.0e-10
BLAST match view associations BLAST with Ssb-c31a Ssb-c31a Ssb-c31a Single stranded-binding protein c31A	protein from Drosophila melanogaster	8.4e-10
BLAST match view associations BLAST with LOC777191 LOC777191 LOC777191 Uncharacterized protein	protein from Gallus gallus	7.6e-09
BLAST match view associations BLAST with MGG_00780 MGG_00780 MGG_00780 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	2.6e-08
BLAST match view associations BLAST with T13F2.2 T13F2.2 T13F2.2	gene from Caenorhabditis elegans	8.7e-08
BLAST match view associations BLAST with orf19.5666 orf19.5666 orf19.5666	gene_product from Candida albicans	3.8e-07
BLAST match view associations BLAST with CaO19.13111 CaO19.13111 CaO19.13111 Putative uncharacterized protein	protein from Candida albicans SC5314	3.8e-07
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Transcriptional coactivator	gene from Saccharomyces cerevisiae	7.1e-07
BLAST match view associations BLAST with F1S1P4 F1S1P4 F1S1P4 Uncharacterized protein	protein from Sus scrofa	1.0e-06
BLAST match view associations BLAST with LOC777191 LOC777191 LOC777191 Uncharacterized protein	protein from Gallus gallus	1.9e-05
BLAST match view associations BLAST with DDB_G0275335 DDB_G0275335 DDB_G0275335 ssDNA-binding transcriptional regulator	gene from Dictyostelium discoideum	0.00017
BLAST match view associations BLAST with DDB_G0270054 DDB_G0270054 DDB_G0270054 ssDNA-binding transcriptional regulator	gene from Dictyostelium discoideum	0.00045

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  033983
        (106 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2184747 - symbol:KIWI species:3702 "Arabidopsi...   358  8.5e-33   1
TAIR|locus:2184732 - symbol:AT5G09240 species:3702 "Arabi...   193  1.1e-20   2
TAIR|locus:2123416 - symbol:KELP species:3702 "Arabidopsi...   155  3.3e-13   2
ZFIN|ZDB-GENE-050522-151 - symbol:sub1a "SUB1 homolog a (...   169  9.1e-13   1
UNIPROTKB|J9NRQ9 - symbol:SUB1 "Uncharacterized protein" ...   146  2.2e-12   2
UNIPROTKB|Q5ZK63 - symbol:SUB1 "Activated RNA polymerase ...   158  1.3e-11   1
ASPGD|ASPL0000000236 - symbol:AN5806 species:162425 "Emer...   152  5.8e-11   1
MGI|MGI:104811 - symbol:Sub1 "SUB1 homolog (S. cerevisiae...   152  5.8e-11   1
RGD|621582 - symbol:Sub1 "SUB1 homolog (S. cerevisiae)" s...   152  5.8e-11   1
UNIPROTKB|A7YWC6 - symbol:SUB1 "Uncharacterized protein" ...   149  1.2e-10   1
UNIPROTKB|E2R6X3 - symbol:SUB1 "Uncharacterized protein" ...   149  1.2e-10   1
UNIPROTKB|F6Y016 - symbol:LOC479283 "Uncharacterized prot...   149  1.2e-10   1
UNIPROTKB|J9P938 - symbol:J9P938 "Uncharacterized protein...   149  1.2e-10   1
UNIPROTKB|P53999 - symbol:SUB1 "Activated RNA polymerase ...   149  1.2e-10   1
UNIPROTKB|I3LQI3 - symbol:SUB1 "Uncharacterized protein" ...   149  1.2e-10   1
ZFIN|ZDB-GENE-040718-209 - symbol:sub1b "SUB1 homolog b (...   147  2.0e-10   1
FB|FBgn0015299 - symbol:Ssb-c31a "Single stranded-binding...   141  8.4e-10   1
POMBASE|SPAC16A10.02 - symbol:sub1 "transcription coactiv...   135  3.6e-09   1
UNIPROTKB|F1NKA2 - symbol:LOC777191 "Uncharacterized prot...   132  7.6e-09   1
UNIPROTKB|G4NEJ8 - symbol:MGG_00780 "Uncharacterized prot...   127  2.6e-08   1
WB|WBGene00011743 - symbol:T13F2.2 species:6239 "Caenorha...   122  8.7e-08   1
CGD|CAL0000694 - symbol:orf19.5666 species:5476 "Candida ...   116  3.8e-07   1
UNIPROTKB|Q59UQ4 - symbol:CaO19.13111 "Putative uncharact...   116  3.8e-07   1
SGD|S000004642 - symbol:SUB1 "Transcriptional coactivator...   119  7.1e-07   1
UNIPROTKB|F1S1P4 - symbol:F1S1P4 "Uncharacterized protein...   112  1.0e-06   1
UNIPROTKB|G1K2Z2 - symbol:LOC777191 "Uncharacterized prot...   100  1.9e-05   1
DICTYBASE|DDB_G0275335 - symbol:DDB_G0275335 "ssDNA-bindi...    91  0.00017   1
DICTYBASE|DDB_G0270054 - symbol:DDB_G0270054 "ssDNA-bindi...    87  0.00045   1


>TAIR|locus:2184747 [details] [associations]
            symbol:KIWI species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
            "transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 EMBL:AL391712 GO:GO:0003713
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447 EMBL:AF053302
            EMBL:BT004745 IPI:IPI00531083 PIR:T52113 RefSeq:NP_196487.1
            UniGene:At.10039 ProteinModelPortal:O65154 SMR:O65154 IntAct:O65154
            STRING:O65154 PaxDb:O65154 PRIDE:O65154 EnsemblPlants:AT5G09250.1
            GeneID:830784 KEGG:ath:AT5G09250 TAIR:At5g09250
            HOGENOM:HOG000239157 InParanoid:O65154 OMA:WIDIREF PhylomeDB:O65154
            ProtClustDB:CLSN2916867 Genevestigator:O65154 GermOnline:AT5G09250
            Uniprot:O65154
        Length = 107

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 69/107 (64%), Positives = 79/107 (73%)

Query:     1 MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXX-IVVCEISKNRRVSVRNWQGK 59
             MS +GKRK+E+   SD   + HAP KK +K          IVVC ISKNRRVSVRNW GK
Sbjct:     1 MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query:    60 VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
             +W+DIREFYVK+GK  PGKKGISLSVDQWNTLR+H E+I KAL D S
Sbjct:    61 IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDLS 107


>TAIR|locus:2184732 [details] [associations]
            symbol:AT5G09240 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
            "transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0009408 "response to heat"
            evidence=RCA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            EMBL:CP002688 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
            Gene3D:2.30.31.10 SUPFAM:SSF54447 UniGene:At.10037 UniGene:At.70268
            IPI:IPI00519075 RefSeq:NP_850798.2 UniGene:At.5322
            ProteinModelPortal:F4KCI8 EnsemblPlants:AT5G09240.2 GeneID:830783
            KEGG:ath:AT5G09240 OMA:RNHEEDI PhylomeDB:F4KCI8 Uniprot:F4KCI8
        Length = 138

 Score = 193 (73.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 42/91 (46%), Positives = 57/91 (62%)

Query:     1 MSGKGKRKEEEEYDSDGSVDG--HAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQG 58
             MS  GKRK+E+   SD   +   HAPPKK +K         I +C + KNRRV VRN  G
Sbjct:     1 MSENGKRKDEDVRASDDRDESETHAPPKKVAKPADEIED--IFICNLDKNRRVFVRNCNG 58

Query:    59 KVWVDIREFYVKEGKKFP--GKKGISLSVDQ 87
             ++W+ IR+F+VK+G   P   K+GISLS++Q
Sbjct:    59 RIWIAIRQFFVKDGITLPCNSKQGISLSLEQ 89

 Score = 65 (27.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 12/20 (60%), Positives = 16/20 (80%)

Query:    87 QWNTLRDHVEEINKALGDNS 106
             QWN LR+H E+I+KAL + S
Sbjct:   117 QWNDLRNHEEDIDKALSELS 136


>TAIR|locus:2123416 [details] [associations]
            symbol:KELP species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
            "transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003173 InterPro:IPR009044
            InterPro:IPR009057 Pfam:PF02229 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            Gene3D:1.10.10.60 GO:GO:0003713 InterPro:IPR014876 Pfam:PF08766
            EMBL:AL161518 EMBL:AF080118 EMBL:AL049525 EMBL:AF053303
            EMBL:AY085896 EMBL:BT005847 IPI:IPI00522129 PIR:T52114
            RefSeq:NP_001078372.1 RefSeq:NP_192830.1 UniGene:At.21693
            ProteinModelPortal:O65155 SMR:O65155 IntAct:O65155 PaxDb:O65155
            PRIDE:O65155 DNASU:826690 EnsemblPlants:AT4G10920.1
            EnsemblPlants:AT4G10920.2 GeneID:826690 KEGG:ath:AT4G10920
            GeneFarm:2402 TAIR:At4g10920 eggNOG:NOG299238 HOGENOM:HOG000238208
            InParanoid:O65155 OMA:LVSIREY PhylomeDB:O65155
            ProtClustDB:CLSN2686069 Genevestigator:O65155 GermOnline:AT4G10920
            Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
            SUPFAM:SSF54447 Uniprot:O65155
        Length = 165

 Score = 155 (59.6 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
 Identities = 26/63 (41%), Positives = 45/63 (71%)

Query:    40 IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
             +++C +S  RRV+++ ++GK  V IRE+Y K+GK+ P  KGISL+ +QW+T + ++  I 
Sbjct:    96 LIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKNMPAIE 155

Query:   100 KAL 102
              A+
Sbjct:   156 NAV 158

 Score = 31 (16.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
 Identities = 5/12 (41%), Positives = 8/12 (66%)

Query:     8 KEEEEYDSDGSV 19
             K  +E+D DG +
Sbjct:    85 KGNKEFDDDGDL 96


>ZFIN|ZDB-GENE-050522-151 [details] [associations]
            symbol:sub1a "SUB1 homolog a (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            ZFIN:ZDB-GENE-050522-151 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
            HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:BX664706
            EMBL:BC095096 IPI:IPI00503863 RefSeq:NP_001018376.1
            UniGene:Dr.84297 SMR:Q504B1 STRING:Q504B1
            Ensembl:ENSDART00000075485 Ensembl:ENSDART00000143848 GeneID:553561
            KEGG:dre:553561 CTD:553561 InParanoid:Q504B1 NextBio:20880301
            Uniprot:Q504B1
        Length = 123

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 37/100 (37%), Positives = 60/100 (60%)

Query:     4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
             K KRK++   +             ASK+        +   +I K R VSVR+++GKV +D
Sbjct:    23 KAKRKKQATPEKPSKKQKSGESSSASKSSSSNKNDNMF--QIGKMRYVSVRDFKGKVLID 80

Query:    64 IREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             IRE+++ +EG+  PG+KGISL+ +QWN L++ + EI+ A+
Sbjct:    81 IREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISEIDDAV 120


>UNIPROTKB|J9NRQ9 [details] [associations]
            symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 OMA:IFKITRT EMBL:AAEX03016493
            Ensembl:ENSCAFT00000037797 Uniprot:J9NRQ9
        Length = 125

 Score = 146 (56.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 27/60 (45%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R +SVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    63 QIGKMRYLSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 122

 Score = 32 (16.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
 Identities = 11/26 (42%), Positives = 12/26 (46%)

Query:     4 KGKR--KEEEEYDSDGSVDGHAPPKK 27
             K KR   +E   DSD  VD     KK
Sbjct:     3 KYKRTLNKESGSDSDSEVDKKLKRKK 28


>UNIPROTKB|Q5ZK63 [details] [associations]
            symbol:SUB1 "Activated RNA polymerase II transcriptional
            coactivator p15" species:9031 "Gallus gallus" [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 EMBL:AJ720221 IPI:IPI00570734
            RefSeq:NP_001008479.1 UniGene:Gga.11479 HSSP:P53999
            ProteinModelPortal:Q5ZK63 SMR:Q5ZK63 STRING:Q5ZK63 PRIDE:Q5ZK63
            GeneID:427425 KEGG:gga:427425 CTD:10923 eggNOG:NOG280527
            HOVERGEN:HBG028243 NextBio:20828685 Uniprot:Q5ZK63
        Length = 126

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 34/100 (34%), Positives = 59/100 (59%)

Query:     4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
             K KRK++   +            K + +          + +I K R VSVR+++GKV +D
Sbjct:    24 KAKRKKQAAPEKPVKKQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLID 83

Query:    64 IREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             IRE+++ +EG+  PG+KGISL+ +QWN L++ + +I+ A+
Sbjct:    84 IREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISDIDDAV 123


>ASPGD|ASPL0000000236 [details] [associations]
            symbol:AN5806 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=IEA] InterPro:IPR003173
            InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355 GO:GO:0003677
            EMBL:BN001301 GO:GO:0003713 EMBL:AACD01000100 eggNOG:NOG299238
            Gene3D:2.30.31.10 SUPFAM:SSF54447 OrthoDB:EOG4WQ4C5
            RefSeq:XP_663410.1 ProteinModelPortal:Q5B0X4
            EnsemblFungi:CADANIAT00007241 GeneID:2871080 KEGG:ani:AN5806.2
            HOGENOM:HOG000213471 OMA:LVNIREY Uniprot:Q5B0X4
        Length = 168

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 30/59 (50%), Positives = 45/59 (76%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             EISK RRV++ +++GK  V+IRE+Y K+G++ PGKKGISL +DQ+++L   + EI   L
Sbjct:    58 EISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKKGISLPIDQFSSLVTLLPEIEIVL 116


>MGI|MGI:104811 [details] [associations]
            symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10090 "Mus
            musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 MGI:MGI:104811
            GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
            GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
            SUPFAM:SSF54447 HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
            CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2
            ChiTaRS:SUB1 EMBL:J03750 EMBL:AK048371 EMBL:AK049260 EMBL:AK132021
            EMBL:AK146335 EMBL:AK151734 EMBL:AK154114 EMBL:BC010967
            IPI:IPI00225633 PIR:A28084 RefSeq:NP_035424.1 UniGene:Mm.41746
            ProteinModelPortal:P11031 SMR:P11031 STRING:P11031
            PhosphoSite:P11031 PaxDb:P11031 PRIDE:P11031
            Ensembl:ENSMUST00000022816 Ensembl:ENSMUST00000110504 GeneID:20024
            KEGG:mmu:20024 UCSC:uc007vhj.1 InParanoid:P11031 NextBio:297547
            Bgee:P11031 CleanEx:MM_SUB1 Genevestigator:P11031
            GermOnline:ENSMUSG00000022205 Uniprot:P11031
        Length = 127

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 27/60 (45%), Positives = 48/60 (80%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ A+
Sbjct:    65 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 124


>RGD|621582 [details] [associations]
            symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10116 "Rattus
            norvegicus" [GO:0003697 "single-stranded DNA binding"
            evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005667 "transcription factor complex" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] InterPro:IPR003173 InterPro:IPR009044
            Pfam:PF02229 RGD:621582 GO:GO:0005634 GO:GO:0005730 GO:GO:0006357
            GO:GO:0006351 GO:GO:0005667 GO:GO:0003713 GO:GO:0003697
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD
            OrthoDB:EOG4NS3D2 EMBL:BC088346 EMBL:K02816 IPI:IPI00208123
            PIR:A23063 RefSeq:NP_001009618.1 UniGene:Rn.231328 UniGene:Rn.8706
            ProteinModelPortal:Q63396 SMR:Q63396 IntAct:Q63396
            MINT:MINT-4598677 STRING:Q63396 PRIDE:Q63396
            Ensembl:ENSRNOT00000015443 GeneID:192269 KEGG:rno:192269
            InParanoid:Q63396 NextBio:622964 Genevestigator:Q63396
            GermOnline:ENSRNOG00000011558 Uniprot:Q63396
        Length = 127

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 27/60 (45%), Positives = 48/60 (80%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ A+
Sbjct:    65 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 124


>UNIPROTKB|A7YWC6 [details] [associations]
            symbol:SUB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
            GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 CTD:10923
            HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:DAAA02050690
            EMBL:BC134490 IPI:IPI00695331 RefSeq:NP_001098877.1
            UniGene:Bt.23529 SMR:A7YWC6 STRING:A7YWC6
            Ensembl:ENSBTAT00000029284 GeneID:533984 KEGG:bta:533984
            InParanoid:A7YWC6 NextBio:20876218 Uniprot:A7YWC6
        Length = 127

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    65 QIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 124


>UNIPROTKB|E2R6X3 [details] [associations]
            symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
            SUPFAM:SSF54447 RefSeq:XP_536425.3 Ensembl:ENSCAFT00000029964
            GeneID:479283 KEGG:cfa:479283 NextBio:20854490 Uniprot:E2R6X3
        Length = 127

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    65 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 124


>UNIPROTKB|F6Y016 [details] [associations]
            symbol:LOC479283 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 OMA:QWNQLKD Ensembl:ENSCAFT00000029964
            EMBL:AAEX03003186 EMBL:AAEX03003187 Uniprot:F6Y016
        Length = 144

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    82 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 141


>UNIPROTKB|J9P938 [details] [associations]
            symbol:J9P938 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 EMBL:AAEX03002980
            Ensembl:ENSCAFT00000026464 OMA:VDIREHY Uniprot:J9P938
        Length = 132

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    70 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 129


>UNIPROTKB|P53999 [details] [associations]
            symbol:SUB1 "Activated RNA polymerase II transcriptional
            coactivator p15" species:9606 "Homo sapiens" [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0003713
            "transcription coactivator activity" evidence=IDA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
            GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
            SUPFAM:SSF54447 CTD:10923 HOVERGEN:HBG028243 EMBL:X79805
            EMBL:U12979 EMBL:BC009610 EMBL:BC010537 EMBL:BC018189 EMBL:BC022339
            IPI:IPI00221222 PIR:A54670 RefSeq:NP_006704.3 UniGene:Hs.229641
            PDB:1PCF PDB:2C62 PDB:2PHE PDBsum:1PCF PDBsum:2C62 PDBsum:2PHE
            ProteinModelPortal:P53999 SMR:P53999 DIP:DIP-29044N IntAct:P53999
            MINT:MINT-138673 STRING:P53999 PhosphoSite:P53999 DMDM:1709514
            PaxDb:P53999 PeptideAtlas:P53999 PRIDE:P53999
            Ensembl:ENST00000265073 Ensembl:ENST00000502897
            Ensembl:ENST00000506237 Ensembl:ENST00000512913
            Ensembl:ENST00000515355 GeneID:10923 KEGG:hsa:10923 UCSC:uc003jhs.2
            GeneCards:GC05P032622 HGNC:HGNC:19985 HPA:CAB015351 HPA:HPA001311
            MIM:600503 neXtProt:NX_P53999 PharmGKB:PA142670858
            InParanoid:P53999 OMA:QWNQLKD OrthoDB:EOG4NS3D2 PhylomeDB:P53999
            ChiTaRS:SUB1 EvolutionaryTrace:P53999 GenomeRNAi:10923
            NextBio:41499 ArrayExpress:P53999 Bgee:P53999 CleanEx:HS_SUB1
            Genevestigator:P53999 GermOnline:ENSG00000113387 Uniprot:P53999
        Length = 127

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    65 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 124


>UNIPROTKB|I3LQI3 [details] [associations]
            symbol:SUB1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
            GO:GO:0003697 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 OMA:QWNQLKD EMBL:FP085384
            Ensembl:ENSSSCT00000023763 Uniprot:I3LQI3
        Length = 134

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct:    72 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 131


>ZFIN|ZDB-GENE-040718-209 [details] [associations]
            symbol:sub1b "SUB1 homolog b (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            ZFIN:ZDB-GENE-040718-209 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 EMBL:BX470118 GeneTree:ENSGT00390000008802
            HOVERGEN:HBG028243 OMA:LDQWKIL OrthoDB:EOG4NS3D2 EMBL:BC076294
            IPI:IPI00505413 RefSeq:NP_001002505.1 UniGene:Dr.13991 SMR:Q6DGP6
            Ensembl:ENSDART00000011229 GeneID:436778 KEGG:dre:436778 CTD:436778
            InParanoid:Q6DGP6 NextBio:20831213 Uniprot:Q6DGP6
        Length = 124

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 28/60 (46%), Positives = 47/60 (78%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++GKV +DIRE+++ + G+  PGKKGISL+ +QW+ L++ + +I+ A+
Sbjct:    62 QIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLNPEQWSQLKEQMSDIDDAI 121


>FB|FBgn0015299 [details] [associations]
            symbol:Ssb-c31a "Single stranded-binding protein c31A"
            species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0003697 "single-stranded DNA
            binding" evidence=ISS;NAS;IDA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0003713 "transcription coactivator activity" evidence=ISS]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634
            GO:GO:0045892 EMBL:AE014134 GO:GO:0006351 GO:GO:0003713
            GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 EMBL:U18971 EMBL:BT023261 PIR:S66164
            RefSeq:NP_477136.1 UniGene:Dm.2642 ProteinModelPortal:Q9VLR5
            SMR:Q9VLR5 MINT:MINT-1003322 STRING:Q9VLR5 PaxDb:Q9VLR5
            PRIDE:Q9VLR5 EnsemblMetazoa:FBtr0079590 GeneID:34120
            KEGG:dme:Dmel_CG8396 CTD:34120 FlyBase:FBgn0015299
            InParanoid:Q9VLR5 OMA:LDQWKIL OrthoDB:EOG4DZ0BW PhylomeDB:Q9VLR5
            GenomeRNAi:34120 NextBio:786953 Bgee:Q9VLR5 GermOnline:CG8396
            Uniprot:Q9VLR5
        Length = 110

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 36/104 (34%), Positives = 53/104 (50%)

Query:     7 RKEEEEYDSDGSVDGHAPP--KKASKTXX------XXXXXXIVVCEISKNRRVSVRNWQG 58
             +K++   DSD   D    P  KKA ++                   +   R+V +  ++G
Sbjct:     5 KKKDSSSDSDSGPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRG 64

Query:    59 KVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +  VDIREFY K G+  PGKKGISLS+ QW  L +  EE+ +A+
Sbjct:    65 RKSVDIREFYDKGGQILPGKKGISLSLIQWKKLLEVAEEVTRAI 108


>POMBASE|SPAC16A10.02 [details] [associations]
            symbol:sub1 "transcription coactivator PC4"
            species:4896 "Schizosaccharomyces pombe" [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0003713
            "transcription coactivator activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0060261 "positive regulation of
            transcription initiation from RNA polymerase II promoter"
            evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            PomBase:SPAC16A10.02 GO:GO:0005634 EMBL:CU329670 GO:GO:0006351
            GO:GO:0003713 GO:GO:0003690 GO:GO:0003697 GO:GO:0060261
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            OrthoDB:EOG4WQ4C5 PIR:T37767 RefSeq:NP_594042.1
            ProteinModelPortal:P87294 STRING:P87294 EnsemblFungi:SPAC16A10.02.1
            GeneID:2542309 KEGG:spo:SPAC16A10.02 NextBio:20803370
            Uniprot:P87294
        Length = 136

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 21/58 (36%), Positives = 42/58 (72%)

Query:    46 SKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
             ++ +R+++  ++G  +V IRE+Y K+G   PGKKGI+L++++W  L+  + E++ +LG
Sbjct:    35 TEKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALNINEWKKLKQLIHEVDDSLG 92


>UNIPROTKB|F1NKA2 [details] [associations]
            symbol:LOC777191 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 IPI:IPI00570734 OMA:QWNQLKD
            EMBL:AADN02060500 EMBL:AADN02060501 EMBL:AADN02060502
            Ensembl:ENSGALT00000039243 Uniprot:F1NKA2
        Length = 124

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 32/99 (32%), Positives = 53/99 (53%)

Query:     4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
             K KRK++   +            K + +          + +I K R VSVR+++GKV +D
Sbjct:    29 KAKRKKQAAPEKPVKKQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLID 88

Query:    64 IREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
                   KEG+  PG+KGISL+ +QWN L++ + +I+ A+
Sbjct:    89 ------KEGEMKPGRKGISLNPEQWNQLKEQISDIDDAV 121


>UNIPROTKB|G4NEJ8 [details] [associations]
            symbol:MGG_00780 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 GO:GO:0003713
            Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_003718212.1 PDB:4AGH
            PDBsum:4AGH ProteinModelPortal:G4NEJ8 EnsemblFungi:MGG_00780T0
            GeneID:2674441 KEGG:mgr:MGG_00780 Uniprot:G4NEJ8
        Length = 162

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 38/109 (34%), Positives = 52/109 (47%)

Query:     1 MSGKGKRKEEEEYDSDGSV--DGHAPPKKASKTXXXXXXXXIVV-----CEISKNRRVSV 53
             M+ K KR  +EE  S GS      AP KKA           +        EIS  RRV +
Sbjct:     5 MTSK-KRARDEEAQSGGSEAETKPAPVKKAKSKASNPGGSQVDAEGNPFWEISDKRRVGI 63

Query:    54 RNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
               ++   +++IRE+Y   G+  PGKKGI L+VDQ+      +  IN  L
Sbjct:    64 SQFKKMDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLKAIPAINAEL 112


>WB|WBGene00011743 [details] [associations]
            symbol:T13F2.2 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
            coactivator activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR003173
            InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003713 EMBL:Z81122
            eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
            HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 PIR:T24876
            RefSeq:NP_501750.1 ProteinModelPortal:Q94045 SMR:Q94045
            STRING:Q94045 PaxDb:Q94045 EnsemblMetazoa:T13F2.2.1
            EnsemblMetazoa:T13F2.2.2 GeneID:188475 KEGG:cel:CELE_T13F2.2
            UCSC:T13F2.2.1 CTD:188475 WormBase:T13F2.2 InParanoid:Q94045
            OMA:LSTEQWE NextBio:938940 Uniprot:Q94045
        Length = 124

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKF-PGKKGISLSVDQWNTLRDHVEEINK 100
             EI   R  +V  ++GK +V+IRE+Y+ ++ +K  P +KGISLS  QW  L+D + EI+K
Sbjct:    64 EIGNLRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGISLSKAQWANLKDLIPEIDK 122


>CGD|CAL0000694 [details] [associations]
            symbol:orf19.5666 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0045945 "positive regulation
            of transcription from RNA polymerase III promoter" evidence=IEA]
            [GO:0006972 "hyperosmotic response" evidence=IEA] [GO:0032968
            "positive regulation of transcription elongation from RNA
            polymerase II promoter" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0006369 "termination of RNA polymerase II
            transcription" evidence=IEA] [GO:0043618 "regulation of
            transcription from RNA polymerase II promoter in response to
            stress" evidence=IEA] [GO:0070898 "RNA polymerase III
            transcriptional preinitiation complex assembly" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694
            GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129
            EMBL:AACQ01000128 Gene3D:2.30.31.10 SUPFAM:SSF54447
            RefSeq:XP_713347.1 RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4
            GeneID:3644958 GeneID:3645016 KEGG:cal:CaO19.13111
            KEGG:cal:CaO19.5666 eggNOG:NOG275260 HOGENOM:HOG000248055
            Uniprot:Q59UQ4
        Length = 146

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query:    45 ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
             +   ++V+VR +     VDIREFY  ++G K PGKKGISL+ D +  L +   +I  AL 
Sbjct:    19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNALD 78

Query:   104 D 104
             D
Sbjct:    79 D 79


>UNIPROTKB|Q59UQ4 [details] [associations]
            symbol:CaO19.13111 "Putative uncharacterized protein"
            species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR003173
            InterPro:IPR009044 Pfam:PF02229 CGD:CAL0000694 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 EMBL:AACQ01000129 EMBL:AACQ01000128
            Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_713347.1
            RefSeq:XP_713394.1 ProteinModelPortal:Q59UQ4 GeneID:3644958
            GeneID:3645016 KEGG:cal:CaO19.13111 KEGG:cal:CaO19.5666
            eggNOG:NOG275260 HOGENOM:HOG000248055 Uniprot:Q59UQ4
        Length = 146

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query:    45 ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
             +   ++V+VR +     VDIREFY  ++G K PGKKGISL+ D +  L +   +I  AL 
Sbjct:    19 LDSKKQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLLEATNKIQNALD 78

Query:   104 D 104
             D
Sbjct:    79 D 79


>SGD|S000004642 [details] [associations]
            symbol:SUB1 "Transcriptional coactivator" species:4932
            "Saccharomyces cerevisiae" [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter"
            evidence=IGI;IDA;IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IC]
            [GO:0032968 "positive regulation of transcription elongation from
            RNA polymerase II promoter" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;ISS;IPI] [GO:0003713
            "transcription coactivator activity" evidence=IEA;IGI;ISS;IPI]
            [GO:0006369 "termination of RNA polymerase II transcription"
            evidence=IGI] [GO:0043618 "regulation of transcription from RNA
            polymerase II promoter in response to stress" evidence=IGI;IMP;IDA]
            [GO:0006972 "hyperosmotic response" evidence=IGI] [GO:0070898 "RNA
            polymerase III transcriptional preinitiation complex assembly"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            SGD:S000004642 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
            GO:GO:0006972 EMBL:BK006946 GO:GO:0003713 GO:GO:0045945 EMBL:Z48502
            GO:GO:0043618 GO:GO:0032968 GO:GO:0006369 eggNOG:NOG299238
            Gene3D:2.30.31.10 SUPFAM:SSF54447 GO:GO:0070898 PIR:S52888
            RefSeq:NP_013753.1 ProteinModelPortal:P54000 SMR:P54000
            DIP:DIP-4696N IntAct:P54000 MINT:MINT-540355 STRING:P54000
            PaxDb:P54000 EnsemblFungi:YMR039C GeneID:855055 KEGG:sce:YMR039C
            CYGD:YMR039c GeneTree:ENSGT00390000008802 HOGENOM:HOG000000752
            OMA:EREANAT OrthoDB:EOG4WQ4C5 NextBio:978301 Genevestigator:P54000
            GermOnline:YMR039C Uniprot:P54000
        Length = 292

 Score = 119 (46.9 bits), Expect = 7.1e-07, P = 7.1e-07
 Identities = 26/63 (41%), Positives = 42/63 (66%)

Query:    42 VCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEIN 99
             + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I+
Sbjct:    40 IFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNID 99

Query:   100 KAL 102
             +AL
Sbjct:   100 EAL 102


>UNIPROTKB|F1S1P4 [details] [associations]
            symbol:F1S1P4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
            GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
            GeneTree:ENSGT00390000008802 EMBL:CU914264 EMBL:FP102115
            Ensembl:ENSSSCT00000013632 Ensembl:ENSSSCT00000017102
            Uniprot:F1S1P4
        Length = 123

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 25/60 (41%), Positives = 41/60 (68%)

Query:    44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +I K R VSVR+++ KV +DIRE+ +  E +  PG KGISL+ +Q N L++ + + + A+
Sbjct:    61 QIGKMRYVSVRDFKEKVLIDIREYQMDPEHEMKPGTKGISLNPEQQNQLKEQISDNDDAV 120


>UNIPROTKB|G1K2Z2 [details] [associations]
            symbol:LOC777191 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
            SUPFAM:SSF54447 GeneTree:ENSGT00390000008802 EMBL:AADN02060500
            EMBL:AADN02060501 EMBL:AADN02060502 Ensembl:ENSGALT00000005135
            Uniprot:G1K2Z2
        Length = 127

 Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 27/101 (26%), Positives = 49/101 (48%)

Query:     4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
             K KRK++   +            K + +          + +I K R VSVR+++GKV   
Sbjct:    24 KAKRKKQAAPEKPVKKQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLFY 83

Query:    64 IREFYVKEGKKFPGKKGISLSV--DQWNTLRDHVEEINKAL 102
                F++   K    K G+S+S+  +QWN L++ + +I+ A+
Sbjct:    84 FILFFLPVDKSNKSKVGLSISLNPEQWNQLKEQISDIDDAV 124


>DICTYBASE|DDB_G0275335 [details] [associations]
            symbol:DDB_G0275335 "ssDNA-binding transcriptional
            regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0003697 "single-stranded DNA binding" evidence=ISS] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR003173
            InterPro:IPR009044 Pfam:PF02229 dictyBase:DDB_G0275335
            GO:GO:0006357 EMBL:AAFI02000013 GO:GO:0005667 GO:GO:0003713
            GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 InterPro:IPR017415
            PIRSF:PIRSF038156 SUPFAM:SSF54447 RefSeq:XP_643662.1
            ProteinModelPortal:Q553Q8 EnsemblProtists:DDB0216410 GeneID:8619927
            KEGG:ddi:DDB_G0275335 InParanoid:Q553Q8 OMA:KEMRSKS
            ProtClustDB:CLSZ2430970 Uniprot:Q553Q8
        Length = 141

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 20/55 (36%), Positives = 35/55 (63%)

Query:    45 ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
             +S  R++S  N++G   +DIREF+  K G+  P  KGISL+ +Q+  + ++ + I
Sbjct:    79 LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQFMVILENGDTI 133


>DICTYBASE|DDB_G0270054 [details] [associations]
            symbol:DDB_G0270054 "ssDNA-binding transcriptional
            regulator" species:44689 "Dictyostelium discoideum" [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IEA;ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0003697 "single-stranded DNA binding" evidence=ISS]
            InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
            dictyBase:DDB_G0270054 EMBL:AAFI02000005 GO:GO:0006357
            GO:GO:0005667 GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238
            Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
            SUPFAM:SSF54447 ProtClustDB:CLSZ2430970 RefSeq:XP_646504.1
            ProteinModelPortal:Q55CH7 EnsemblProtists:DDB0220621 GeneID:8617464
            KEGG:ddi:DDB_G0270054 InParanoid:Q55CH7 OMA:IFKITRT Uniprot:Q55CH7
        Length = 129

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 19/44 (43%), Positives = 29/44 (65%)

Query:    45 ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQ 87
             +S  R++S  N++G   +DIREF+  K G+  P  KGISL+ +Q
Sbjct:    67 LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQ 110


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.131   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      106        98   0.00091  102 3  11 23  0.49    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  28
  No. of states in DFA:  579 (62 KB)
  Total size of DFA:  133 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.34u 0.10s 11.44t   Elapsed:  00:00:01
  Total cpu time:  11.34u 0.10s 11.44t   Elapsed:  00:00:01
  Start:  Fri May 10 10:23:50 2013   End:  Fri May 10 10:23:51 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with KIWI KIWI KIWI AT5G09250	protein from Arabidopsis thaliana	8.5e-33
BLAST match view associations BLAST with AT5G09240 AT5G09240 AT5G09240	protein from Arabidopsis thaliana	1.1e-20
BLAST match view associations BLAST with KELP KELP KELP AT4G10920	protein from Arabidopsis thaliana	3.3e-13
BLAST match view associations BLAST with sub1a sub1a sub1a SUB1 homolog a (S. cerevisiae)	gene_product from Danio rerio	9.1e-13
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Canis lupus familiaris	2.2e-12
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Activated RNA polymerase II transcriptional coactivator p15	protein from Gallus gallus	1.3e-11
BLAST match view associations BLAST with Sub1 Sub1 Sub1 SUB1 homolog (S. cerevisiae)	protein from Mus musculus	5.8e-11
BLAST match view associations BLAST with Sub1 Sub1 Sub1 SUB1 homolog (S. cerevisiae)	gene from Rattus norvegicus	5.8e-11
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Bos taurus	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with LOC479283 LOC479283 LOC479283 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with J9P938 J9P938 J9P938 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Activated RNA polymerase II transcriptional coactivator p15	protein from Homo sapiens	1.2e-10
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Uncharacterized protein	protein from Sus scrofa	1.2e-10
BLAST match view associations BLAST with sub1b sub1b sub1b SUB1 homolog b (S. cerevisiae)	gene_product from Danio rerio	2.0e-10
BLAST match view associations BLAST with Ssb-c31a Ssb-c31a Ssb-c31a Single stranded-binding protein c31A	protein from Drosophila melanogaster	8.4e-10
BLAST match view associations BLAST with LOC777191 LOC777191 LOC777191 Uncharacterized protein	protein from Gallus gallus	7.6e-09
BLAST match view associations BLAST with MGG_00780 MGG_00780 MGG_00780 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	2.6e-08
BLAST match view associations BLAST with T13F2.2 T13F2.2 T13F2.2	gene from Caenorhabditis elegans	8.7e-08
BLAST match view associations BLAST with orf19.5666 orf19.5666 orf19.5666	gene_product from Candida albicans	3.8e-07
BLAST match view associations BLAST with CaO19.13111 CaO19.13111 CaO19.13111 Putative uncharacterized protein	protein from Candida albicans SC5314	3.8e-07
BLAST match view associations BLAST with SUB1 SUB1 SUB1 Transcriptional coactivator	gene from Saccharomyces cerevisiae	7.1e-07
BLAST match view associations BLAST with F1S1P4 F1S1P4 F1S1P4 Uncharacterized protein	protein from Sus scrofa	1.0e-06
BLAST match view associations BLAST with LOC777191 LOC777191 LOC777191 Uncharacterized protein	protein from Gallus gallus	1.9e-05
BLAST match view associations BLAST with DDB_G0275335 DDB_G0275335 DDB_G0275335 ssDNA-binding transcriptional regulator	gene from Dictyostelium discoideum	0.00017
BLAST match view associations BLAST with DDB_G0270054 DDB_G0270054 DDB_G0270054 ssDNA-binding transcriptional regulator	gene from Dictyostelium discoideum	0.00045