BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 033983
         (106 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|297811013|ref|XP_002873390.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319227|gb|EFH49649.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 107

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASK-TDSSDDSDDIVVCEISKNRRVSVRNWQGK 59
           MS +GKRK+E+   SD   + HAP KK +K  DSSD+SDDIVVC +SKNRRVSVRNW GK
Sbjct: 1   MSSRGKRKDEDVRASDDESESHAPAKKVAKPADSSDESDDIVVCNLSKNRRVSVRNWNGK 60

Query: 60  VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           +W+DIREFYVK+GK  PGKKGISLSVDQWNTLR+H E+I KAL D S
Sbjct: 61  IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDLS 107


>gi|15242365|ref|NP_196487.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
           thaliana]
 gi|37079587|sp|O65154.1|KIWI_ARATH RecName: Full=RNA polymerase II transcriptional coactivator KIWI
 gi|2997684|gb|AAC08574.1| putative transcriptional co-activator [Arabidopsis thaliana]
 gi|9955512|emb|CAC05451.1| putative transcriptional co-activator (KIWI) [Arabidopsis thaliana]
 gi|28466805|gb|AAO44011.1| At5g09250 [Arabidopsis thaliana]
 gi|110736129|dbj|BAF00036.1| putative transcriptional co-activator [Arabidopsis thaliana]
 gi|225898901|dbj|BAH30581.1| hypothetical protein [Arabidopsis thaliana]
 gi|332003981|gb|AED91364.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
           thaliana]
          Length = 107

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 85/107 (79%), Gaps = 1/107 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASK-TDSSDDSDDIVVCEISKNRRVSVRNWQGK 59
           MS +GKRK+E+   SD   + HAP KK +K  D SD SDDIVVC ISKNRRVSVRNW GK
Sbjct: 1   MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 60  VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           +W+DIREFYVK+GK  PGKKGISLSVDQWNTLR+H E+I KAL D S
Sbjct: 61  IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDLS 107


>gi|388504274|gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 88/105 (83%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           MSGKGK++++ +  SD   D HAPPKK+ K DS +D D IVVCEISKNRRVSVRNWQG++
Sbjct: 1   MSGKGKKRDDLDRASDADSDSHAPPKKSLKKDSDEDPDSIVVCEISKNRRVSVRNWQGRI 60

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDN 105
            VDI EFYVK+GK+ PGKKGISL++DQWN LR+H+EEI+KA+ ++
Sbjct: 61  VVDILEFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAVNES 105


>gi|225438387|ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera]
 gi|147846591|emb|CAN79502.1| hypothetical protein VITISV_022689 [Vitis vinifera]
 gi|296082597|emb|CBI21602.3| unnamed protein product [Vitis vinifera]
          Length = 103

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/106 (69%), Positives = 87/106 (82%), Gaps = 3/106 (2%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           MS  GKRK+   Y SDG  D HAP KK+S  DS DD D+I+VCEIS+NRRVSVRNWQGKV
Sbjct: 1   MSKWGKRKQS--YASDGDSDDHAPSKKSSMKDS-DDPDNIIVCEISRNRRVSVRNWQGKV 57

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
            VDIREFYVK+GK+ PGKKGISL++DQWN LRDHV EI++A+ DN+
Sbjct: 58  QVDIREFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEIDEAVADNA 103


>gi|449457317|ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus]
 gi|449527765|ref|XP_004170880.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus]
          Length = 104

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 5/106 (4%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           MS  GKRK +E    D   +G APP K  K DS DD+D+IVVCE+SKNRRV VRNWQGK+
Sbjct: 1   MSASGKRKGDE----DDVSEGDAPPSKTFKKDS-DDTDEIVVCELSKNRRVMVRNWQGKI 55

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
            VDIREFYVK+GK+ PGKKGISLS+DQWN L +HVEEI+KA+ +NS
Sbjct: 56  VVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 101


>gi|224093558|ref|XP_002309936.1| predicted protein [Populus trichocarpa]
 gi|222852839|gb|EEE90386.1| predicted protein [Populus trichocarpa]
          Length = 120

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 7/110 (6%)

Query: 1   MSGKGKRK-----EEEEYDSDGSVDGHAPPKKASKTD--SSDDSDDIVVCEISKNRRVSV 53
           MSG+G ++     EEE   +D +     P KK +K D  SSD+SD+IVVCEI +NRRV+V
Sbjct: 9   MSGRGGKRAAAAREEEGSGADDNYAQQPPAKKPTKADNSSSDNSDEIVVCEIGRNRRVTV 68

Query: 54  RNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           RNW+GK+ VDIREFY K+G   PGKKGI+LS+DQWN LRDHVEEI+KALG
Sbjct: 69  RNWRGKINVDIREFYPKDGNLLPGKKGITLSLDQWNMLRDHVEEIDKALG 118


>gi|255550572|ref|XP_002516336.1| RNA polymerase II transcriptional coactivator KIWI, putative
          [Ricinus communis]
 gi|223544566|gb|EEF46083.1| RNA polymerase II transcriptional coactivator KIWI, putative
          [Ricinus communis]
          Length = 84

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 76/85 (89%), Gaps = 2/85 (2%)

Query: 1  MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
          MSG+GKRKEEE    D S DG APPKKASKT ++DDSDDIVVCEISKNRRV+VRNWQGKV
Sbjct: 1  MSGRGKRKEEEGASDDNS-DGDAPPKKASKT-TTDDSDDIVVCEISKNRRVTVRNWQGKV 58

Query: 61 WVDIREFYVKEGKKFPGKKGISLSV 85
          W+DIREFY+K+GK+ PGKKGI++++
Sbjct: 59 WIDIREFYLKDGKQLPGKKGITVTL 83


>gi|357464751|ref|XP_003602657.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
           truncatula]
 gi|358348306|ref|XP_003638188.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
           truncatula]
 gi|355491705|gb|AES72908.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
           truncatula]
 gi|355504123|gb|AES85326.1| RNA polymerase II transcriptional coactivator KIWI [Medicago
           truncatula]
          Length = 107

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 1/105 (0%)

Query: 2   SGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVW 61
           +GKGK++EE ++ S+   + HAPPKK +K D+ DDS DIV  EI KNRRVSVR W  + W
Sbjct: 4   TGKGKKREELDHASEDDTESHAPPKKTAKKDTEDDSGDIVF-EIGKNRRVSVRTWNKQPW 62

Query: 62  VDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           VDIREFY K+GK+ PGKKGISL+++QW  LRDH+EEI+ A+ + S
Sbjct: 63  VDIREFYTKDGKQLPGKKGISLNMEQWIVLRDHIEEIDNAVKEKS 107


>gi|351722133|ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycine max]
 gi|255627821|gb|ACU14255.1| unknown [Glycine max]
          Length = 105

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 67/106 (63%), Positives = 86/106 (81%), Gaps = 1/106 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           MSGK KR++++      S +GHAPPKK+ K DS DD D I VCEI KNRRV+VRNW+G +
Sbjct: 1   MSGKAKRRDDDGASDADS-EGHAPPKKSLKKDSDDDPDSITVCEILKNRRVAVRNWKGSI 59

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
            VDIREFYV++GK+ PG+KGISL++DQWN LR+HVEEI+KA+ +NS
Sbjct: 60  MVDIREFYVEDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAINENS 105


>gi|359806581|ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
 gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 87/106 (82%), Gaps = 1/106 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           MSGK KR+++++     S +GHAPP K+ K DS DD D + +CEISKNRRV+VRNW+G +
Sbjct: 1   MSGKAKRRDDDDASDADS-EGHAPPMKSLKKDSDDDPDSVTICEISKNRRVAVRNWKGSI 59

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
            VDIREFYVK+GK+ PG+KGISL++DQWN LR+HVEEI+KA+ +NS
Sbjct: 60  MVDIREFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAVNENS 105


>gi|449527763|ref|XP_004170879.1| PREDICTED: RNA polymerase II transcriptional coactivator
          KIWI-like [Cucumis sativus]
          Length = 118

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/90 (66%), Positives = 69/90 (76%), Gaps = 5/90 (5%)

Query: 1  MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
          MS  GKRK +E    D   +G APP K  K DS DD+D+IVVCE+SKNRRV VRNWQGK+
Sbjct: 1  MSASGKRKGDE----DDVSEGDAPPSKTFKKDS-DDTDEIVVCELSKNRRVMVRNWQGKI 55

Query: 61 WVDIREFYVKEGKKFPGKKGISLSVDQWNT 90
           VDIREFYVK+GK+ PGKKGISLS+DQ  T
Sbjct: 56 VVDIREFYVKDGKQMPGKKGISLSLDQVCT 85


>gi|297811011|ref|XP_002873389.1| transcriptional coactivator p15 family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319226|gb|EFH49648.1| transcriptional coactivator p15 family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 110

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/110 (51%), Positives = 77/110 (70%), Gaps = 6/110 (5%)

Query: 1   MSGKGKRKEEE--EYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQG 58
           MS  GKRK EE    D+D   + HAPPKK +K   +D+++DI +C + KNRRV VRN  G
Sbjct: 1   MSSSGKRKGEEVRASDNDDESETHAPPKKVAKP--ADETEDIFICNLDKNRRVFVRNCNG 58

Query: 59  KVWVDIREFYVKEGKKFP--GKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           ++W+ IR+F+VK+G   P   K GISLS++QWN LR+H E+I+KAL D S
Sbjct: 59  RIWIAIRQFFVKDGITLPCNSKHGISLSLEQWNDLRNHEEDIDKALSDLS 108


>gi|186521475|ref|NP_001119194.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
          thaliana]
 gi|332003982|gb|AED91365.1| RNA polymerase II transcriptional coactivator KIWI [Arabidopsis
          thaliana]
          Length = 85

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 63/81 (77%), Gaps = 1/81 (1%)

Query: 1  MSGKGKRKEEEEYDSDGSVDGHAPPKKASK-TDSSDDSDDIVVCEISKNRRVSVRNWQGK 59
          MS +GKRK+E+   SD   + HAP KK +K  D SD SDDIVVC ISKNRRVSVRNW GK
Sbjct: 1  MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 60 VWVDIREFYVKEGKKFPGKKG 80
          +W+DIREFYVK+GK  PGKKG
Sbjct: 61 IWIDIREFYVKDGKTLPGKKG 81


>gi|116782200|gb|ABK22407.1| unknown [Picea sitchensis]
 gi|224285214|gb|ACN40333.1| unknown [Picea sitchensis]
          Length = 104

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 1/103 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTD-SSDDSDDIVVCEISKNRRVSVRNWQGK 59
           MS  GKRKEE + D D   DG +P KK +K    SDD+  I +CEISK R+VSVR WQGK
Sbjct: 1   MSKWGKRKEEYDRDDDSDGDGESPVKKKTKKKFVSDDTSTIEICEISKTRKVSVRMWQGK 60

Query: 60  VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++VDIREFY+K+GK+ PGKKGISLS+DQW  LR+H++E++K +
Sbjct: 61  IFVDIREFYIKDGKQLPGKKGISLSLDQWEVLRNHIDEVDKEI 103


>gi|15242363|ref|NP_196486.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
 gi|9955511|emb|CAC05450.1| transcriptional co-activator-like protein [Arabidopsis thaliana]
 gi|26450870|dbj|BAC42542.1| putative transcriptional co-activator [Arabidopsis thaliana]
 gi|28416823|gb|AAO42942.1| At5g09240 [Arabidopsis thaliana]
 gi|332003980|gb|AED91363.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
          Length = 110

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 77/110 (70%), Gaps = 6/110 (5%)

Query: 1   MSGKGKRKEEEEYDSDG--SVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQG 58
           MS  GKRK+E+   SD     + HAPPKK +K   +D+ +DI +C + KNRRV VRN  G
Sbjct: 1   MSENGKRKDEDVRASDDRDESETHAPPKKVAKP--ADEIEDIFICNLDKNRRVFVRNCNG 58

Query: 59  KVWVDIREFYVKEGKKFP--GKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           ++W+ IR+F+VK+G   P   K+GISLS++QWN LR+H E+I+KAL + S
Sbjct: 59  RIWIAIRQFFVKDGITLPCNSKQGISLSLEQWNDLRNHEEDIDKALSELS 108


>gi|302773057|ref|XP_002969946.1| hypothetical protein SELMODRAFT_92844 [Selaginella moellendorffii]
 gi|300162457|gb|EFJ29070.1| hypothetical protein SELMODRAFT_92844 [Selaginella moellendorffii]
          Length = 86

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 62/77 (80%)

Query: 26  KKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSV 85
           K+ SK D  +D + + VCEISKNR+VSVR W+G+V VDIRE++ K G+  PGKKGISL++
Sbjct: 6   KRGSKADEKEDEESVAVCEISKNRKVSVRKWRGQVLVDIREYWYKGGECLPGKKGISLTM 65

Query: 86  DQWNTLRDHVEEINKAL 102
           DQWN L++HV++I+ A+
Sbjct: 66  DQWNVLQEHVKQIDSAV 82


>gi|326510383|dbj|BAJ87408.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 106

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/87 (56%), Positives = 68/87 (78%), Gaps = 4/87 (4%)

Query: 24  PPKK---ASKTDSSDDSDD-IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKK 79
           PP K   A K   S+++DD IVV +ISKN+RV+VR+W GKV VD+REFYVK+GK  P +K
Sbjct: 20  PPAKRQAAGKDGPSEETDDGIVVAQISKNKRVAVRSWNGKVMVDMREFYVKDGKSLPTRK 79

Query: 80  GISLSVDQWNTLRDHVEEINKALGDNS 106
           GISLS+DQW  LRD+++ I++A+ +N+
Sbjct: 80  GISLSMDQWEILRDNIKAIDEAVKENT 106


>gi|222623045|gb|EEE57177.1| hypothetical protein OsJ_07114 [Oryza sativa Japonica Group]
          Length = 427

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 2/86 (2%)

Query: 23  APPKKASKTDSSDDS--DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           A  ++A+  D   +S  DDIVV +ISKNRRV+VR W GKV VDIREFY K+GK  PG+KG
Sbjct: 342 AAKRRAAGDDGPSESADDDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKG 401

Query: 81  ISLSVDQWNTLRDHVEEINKALGDNS 106
           I L +DQW  LRD+++ I++A+ +N+
Sbjct: 402 IQLPMDQWKILRDNIKAIDEAIKENA 427


>gi|115446667|ref|NP_001047113.1| Os02g0553600 [Oryza sativa Japonica Group]
 gi|50725768|dbj|BAD33299.1| transcriptional coactivator p15 (PC4) family protein-like [Oryza
           sativa Japonica Group]
 gi|113536644|dbj|BAF09027.1| Os02g0553600 [Oryza sativa Japonica Group]
 gi|125539866|gb|EAY86261.1| hypothetical protein OsI_07632 [Oryza sativa Indica Group]
 gi|215704132|dbj|BAG92972.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 101

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 64/86 (74%), Gaps = 2/86 (2%)

Query: 23  APPKKASKTDSSDDS--DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           A  ++A+  D   +S  DDIVV +ISKNRRV+VR W GKV VDIREFY K+GK  PG+KG
Sbjct: 16  AAKRRAAGDDGPSESADDDIVVAQISKNRRVAVRTWNGKVVVDIREFYEKDGKTLPGRKG 75

Query: 81  ISLSVDQWNTLRDHVEEINKALGDNS 106
           I L +DQW  LRD+++ I++A+ +N+
Sbjct: 76  IQLPMDQWKILRDNIKAIDEAIKENA 101


>gi|242061940|ref|XP_002452259.1| hypothetical protein SORBIDRAFT_04g022580 [Sorghum bicolor]
 gi|241932090|gb|EES05235.1| hypothetical protein SORBIDRAFT_04g022580 [Sorghum bicolor]
          Length = 101

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 58/69 (84%)

Query: 38  DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEE 97
           D  VV EISKN++VSVRNW+G+V+VD+REFYVK+GK  P +KGISL +DQW  LRD+++ 
Sbjct: 33  DGTVVAEISKNKKVSVRNWKGRVFVDLREFYVKDGKSLPTRKGISLQLDQWKILRDNIKA 92

Query: 98  INKALGDNS 106
           I++A+ +N+
Sbjct: 93  IDEAIKENT 101


>gi|259490442|ref|NP_001159025.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
 gi|195640074|gb|ACG39505.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
          Length = 103

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 66/86 (76%), Gaps = 2/86 (2%)

Query: 23  APPKKASKTDSSDDS--DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           A  ++A++ D   +S  D  VV EISKN++VSVR+W+G+V+VD+REFY K+GK  P +KG
Sbjct: 18  AAKRQAARDDGPSESAEDGTVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPTRKG 77

Query: 81  ISLSVDQWNTLRDHVEEINKALGDNS 106
           ISL +DQW  L+D+++ IN+A+ +N+
Sbjct: 78  ISLQLDQWKILKDNIKAINEAIEENT 103


>gi|195610466|gb|ACG27063.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
 gi|413937234|gb|AFW71785.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
          Length = 103

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 66/86 (76%), Gaps = 2/86 (2%)

Query: 23  APPKKASKTDSSDDS--DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           A  ++A++ D   +S  D  VV EISKN++VSVR+W+G+V+VD+REFY K+GK  P +KG
Sbjct: 18  AAKRQAARDDGPSESAEDGTVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPTRKG 77

Query: 81  ISLSVDQWNTLRDHVEEINKALGDNS 106
           ISL +DQW  L+D+++ IN+A+ +N+
Sbjct: 78  ISLQLDQWKILKDNIKAINEAIEENT 103


>gi|357149498|ref|XP_003575132.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Brachypodium distachyon]
          Length = 109

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 63/83 (75%), Gaps = 4/83 (4%)

Query: 24  PPKK---ASKTDSSDDSDD-IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKK 79
           PP K   A K   S+D+DD  VV +ISKN+RVSV++W GKV VD+REFYVK+GK  P +K
Sbjct: 21  PPAKRQAAGKETPSEDADDSTVVAQISKNKRVSVKSWNGKVMVDLREFYVKDGKDLPTRK 80

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GISL +DQW  L+D+++ I++A+
Sbjct: 81  GISLPIDQWKILKDNIKAIDEAV 103


>gi|356570189|ref|XP_003553273.1| PREDICTED: heat stress transcription factor A-6a-like [Glycine
          max]
          Length = 202

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 59/81 (72%), Gaps = 1/81 (1%)

Query: 1  MSGKGKRKEEE-EYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGK 59
          MSGK KR++++   D+D + +GH  PKK+ K D  DD D I +CEIS N+RVSVR W+G 
Sbjct: 1  MSGKAKRRDDDGASDTDSNSEGHVSPKKSLKKDYDDDPDSITICEISNNKRVSVRKWKGN 60

Query: 60 VWVDIREFYVKEGKKFPGKKG 80
          + VDI EFY+K+GK+  G+KG
Sbjct: 61 IMVDIHEFYIKDGKQLAGRKG 81


>gi|42570512|ref|NP_850798.2| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
 gi|332003979|gb|AED91362.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
          Length = 138

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 34/138 (24%)

Query: 1   MSGKGKRKEEEEYDSDG--SVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQG 58
           MS  GKRK+E+   SD     + HAPPKK +K   +D+ +DI +C + KNRRV VRN  G
Sbjct: 1   MSENGKRKDEDVRASDDRDESETHAPPKKVAK--PADEIEDIFICNLDKNRRVFVRNCNG 58

Query: 59  KVWVDIREFYVKEGKKFP--GKKGISLSVD----------------------------QW 88
           ++W+ IR+F+VK+G   P   K+GISLS++                            QW
Sbjct: 59  RIWIAIRQFFVKDGITLPCNSKQGISLSLEQVFTSLFHCLCLPHVHMSCLLHETFFLMQW 118

Query: 89  NTLRDHVEEINKALGDNS 106
           N LR+H E+I+KAL + S
Sbjct: 119 NDLRNHEEDIDKALSELS 136


>gi|118792757|ref|XP_320484.2| AGAP012041-PA [Anopheles gambiae str. PEST]
 gi|116117051|gb|EAA00534.2| AGAP012041-PA [Anopheles gambiae str. PEST]
          Length = 105

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 7   RKEEEEYDSDGSVDGHAPPKKASKTD--SSDDSDDIVVCEISKNRRVSVRNWQGKVWVDI 64
           +K+E   DSD S +   P KK   T+  +S    D  V E+ KNR+++V  ++GKV+V I
Sbjct: 5   KKQESSTDSDTSFEDRTPAKKPKSTEKAASTPGKDPNVFELDKNRKITVNEFKGKVYVGI 64

Query: 65  REFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RE+Y K+G+  P KKGISL+V QW TL +H + IN+ +
Sbjct: 65  REYYSKDGQDLPSKKGISLTVPQWKTLLEHADAINEQI 102


>gi|312375405|gb|EFR22785.1| hypothetical protein AND_14204 [Anopheles darlingi]
          Length = 584

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 59/79 (74%), Gaps = 4/79 (5%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISL 83
           P +  +K+DS+DD       ++ KNR+++VR+++GKV+VDIREFY K+GK+ PGKKGISL
Sbjct: 507 PSEGGNKSDSTDDG----CIQLDKNRKITVRDFKGKVYVDIREFYEKDGKQMPGKKGISL 562

Query: 84  SVDQWNTLRDHVEEINKAL 102
           SV QW  L +  +E+N+ L
Sbjct: 563 SVPQWKKLLESADEVNEKL 581


>gi|302799314|ref|XP_002981416.1| hypothetical protein SELMODRAFT_114406 [Selaginella moellendorffii]
 gi|300150956|gb|EFJ17604.1| hypothetical protein SELMODRAFT_114406 [Selaginella moellendorffii]
          Length = 62

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 50/58 (86%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ISKNR+VSVR W+G+V VDIRE++ K G+  PGKKGISL++DQWN L++HV++I+ A+
Sbjct: 1   ISKNRKVSVRKWRGQVLVDIREYWYKGGECLPGKKGISLTMDQWNVLQEHVKQIDSAV 58


>gi|391344790|ref|XP_003746678.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Metaseiulus occidentalis]
          Length = 116

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 10/112 (8%)

Query: 1   MSGKGKRKEE-EEYDSDGSVDGHAPPKKASKTDSSDDSDDI-------VVCEISKNRRVS 52
           M+GK  RK    E DSD   D   PP  A+K   +D+            V E+SK R VS
Sbjct: 1   MAGKKSRKAAVSESDSDSGPDDRNPPANAAKKQKTDEEGKPKKNEAGEYVFELSKMRNVS 60

Query: 53  VRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           V+ ++G+V V+IREFY     G+  PGKKGI+LS DQWN L++H+ +I+ A+
Sbjct: 61  VKEFKGRVLVNIREFYEDKNSGELRPGKKGIALSADQWNRLKEHMNDIDAAI 112


>gi|193606183|ref|XP_001948183.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Acyrthosiphon pisum]
          Length = 113

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 9/93 (9%)

Query: 17  GSVDGHAPPKKA-------SKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV 69
           G  D + PPKK+       SK  SS++ +      + KNR V VR ++GK+++DIREFY 
Sbjct: 19  GPDDRNPPPKKSKPSDKGSSKKTSSNEEEHSFA--LDKNRFVKVREFRGKLFIDIREFYE 76

Query: 70  KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           K G+  PGKKGISLSV QWN L++ +++I K++
Sbjct: 77  KNGETLPGKKGISLSVGQWNKLKEQIDDIQKSV 109


>gi|157119659|ref|XP_001653440.1| p31A, putative [Aedes aegypti]
 gi|157119661|ref|XP_001653441.1| p31A, putative [Aedes aegypti]
 gi|108875250|gb|EAT39475.1| AAEL008736-PA [Aedes aegypti]
 gi|403182989|gb|EJY57774.1| AAEL008736-PB [Aedes aegypti]
          Length = 103

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 3/99 (3%)

Query: 6   KRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCE--ISKNRRVSVRNWQGKVWVD 63
           K K+++  DSD   D   P KK SKT+S   ++D    E  + +NR+V+V  ++ K++V+
Sbjct: 3   KNKKQDTSDSDSGPDDRTPVKK-SKTESGSTTNDKGEEEWALDRNRKVTVSEFKNKIYVN 61

Query: 64  IREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +RE+Y K+GK  PGKKGISL+V QW  L +H +EIN+ +
Sbjct: 62  VREYYEKDGKTLPGKKGISLTVPQWKKLLEHADEINEKI 100


>gi|157674639|gb|ABV60408.1| RNA polymerase II transcriptional coactivator [Artemia franciscana]
          Length = 108

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 4/104 (3%)

Query: 3   GKGKRKEEEEYDSDGSVDGHAPPKKASKT---DSSDDSDDIVVCEISKNRRVSVRNWQGK 59
           GK K K E E DSD   D   PPKK+  T    +S  SD+     + K R + VR+++GK
Sbjct: 2   GKDKNKREVESDSDSGPDDPNPPKKSKSTVKQSASKGSDEEPTWTLDKKRFLKVRSFKGK 61

Query: 60  VWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            +VDIRE+Y    G   PGKKGISLSV QW  +++ ++E+++AL
Sbjct: 62  TFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEAL 105


>gi|357136106|ref|XP_003569647.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Brachypodium distachyon]
          Length = 183

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 50/68 (73%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD+ D+++C +S +RRV+++ ++G   V IRE+Y+K+GK+ P  KGIS++V+QW T R+ 
Sbjct: 109 DDNGDLILCRLSTHRRVTLQEFRGMTLVSIREYYLKDGKEMPTSKGISMTVEQWETFRNS 168

Query: 95  VEEINKAL 102
           V  I  A+
Sbjct: 169 VPAIEDAI 176


>gi|351725209|ref|NP_001238108.1| uncharacterized protein LOC100499671 [Glycine max]
 gi|255625681|gb|ACU13185.1| unknown [Glycine max]
          Length = 163

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 52/75 (69%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
           ASK    DD  D+++C +S  RRV++++++GK  V IRE+Y K+GK+ P  KGISL+ +Q
Sbjct: 83  ASKGKEYDDEGDLIICRLSDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQ 142

Query: 88  WNTLRDHVEEINKAL 102
           W+  + +V  I KA+
Sbjct: 143 WSAFKKNVPAIEKAI 157


>gi|225426286|ref|XP_002266998.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Vitis vinifera]
          Length = 187

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 52/76 (68%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           K+S     DD  D+++C +S  RRV++++++GK  V IREFY K+GK+ P  KGISL+ +
Sbjct: 104 KSSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAE 163

Query: 87  QWNTLRDHVEEINKAL 102
           QW+  + +V  I +A+
Sbjct: 164 QWSAFKKNVPAIEEAI 179


>gi|351722649|ref|NP_001238275.1| uncharacterized protein LOC100305633 [Glycine max]
 gi|255626145|gb|ACU13417.1| unknown [Glycine max]
          Length = 166

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 51/75 (68%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
            SK    DD  D+++C +S  RRV +++++GK  V IRE+Y K+GK+ P  KGISL+ +Q
Sbjct: 86  VSKGKEYDDEGDLIICRLSDKRRVPIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQ 145

Query: 88  WNTLRDHVEEINKAL 102
           W+T + +V  I KA+
Sbjct: 146 WSTFKKNVPAIEKAI 160


>gi|42573317|ref|NP_974755.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
 gi|332003978|gb|AED91361.1| ssDNA-binding transcriptional regulator [Arabidopsis thaliana]
          Length = 120

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 6/89 (6%)

Query: 1  MSGKGKRKEEEEYDSDG--SVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQG 58
          MS  GKRK+E+   SD     + HAPPKK +K   +D+ +DI +C + KNRRV VRN  G
Sbjct: 1  MSENGKRKDEDVRASDDRDESETHAPPKKVAK--PADEIEDIFICNLDKNRRVFVRNCNG 58

Query: 59 KVWVDIREFYVKEGKKFP--GKKGISLSV 85
          ++W+ IR+F+VK+G   P   K+G ++ V
Sbjct: 59 RIWIAIRQFFVKDGITLPCNSKQGPAILV 87


>gi|326526877|dbj|BAK00827.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 49/68 (72%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD+ D+++C +SK+RRV+++ ++G   V IRE+Y+K+GK+ P  KGIS++V+QW T    
Sbjct: 116 DDNGDLIICRLSKSRRVTLQEFKGMTLVSIREYYLKDGKEMPTSKGISMTVEQWETFSKS 175

Query: 95  VEEINKAL 102
           V  I  A+
Sbjct: 176 VPAIEDAI 183


>gi|147820800|emb|CAN65190.1| hypothetical protein VITISV_032101 [Vitis vinifera]
          Length = 320

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 52/76 (68%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           K+S     DD  D+++C +S  RRV++++++GK  V IREFY K+GK+ P  KGISL+ +
Sbjct: 182 KSSGVKEYDDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAE 241

Query: 87  QWNTLRDHVEEINKAL 102
           QW+  + +V  I +A+
Sbjct: 242 QWSAFKKNVPAIEEAI 257


>gi|226504158|ref|NP_001152660.1| LOC100286301 [Zea mays]
 gi|195658657|gb|ACG48796.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
 gi|413937233|gb|AFW71784.1| RNA polymerase II transcriptional coactivator KIWI [Zea mays]
          Length = 106

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 2/68 (2%)

Query: 23 APPKKASKTDSSDDS--DDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
          A  ++A++ D   +S  D  VV EISKN++VSVR+W+G+V+VD+REFY K+GK  P +KG
Sbjct: 18 AAKRQAARDDGPSESAEDGTVVAEISKNKKVSVRSWKGRVFVDLREFYFKDGKTLPTRKG 77

Query: 81 ISLSVDQW 88
          ISL +DQ+
Sbjct: 78 ISLQLDQF 85


>gi|224001396|ref|XP_002290370.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973792|gb|EED92122.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 113

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 43/52 (82%)

Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
          +I+KN+R +VR W+  V VDIREFY K+GK+ PGKKGISL+++Q+  LR+HV
Sbjct: 48 DITKNKRCTVRKWKKAVLVDIREFYEKDGKQLPGKKGISLTLEQYKALREHV 99


>gi|297742357|emb|CBI34506.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 49/68 (72%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV++++++GK  V IREFY K+GK+ P  KGISL+ +QW+  + +
Sbjct: 67  DDDGDLIICRLSDRRRVTIQDFRGKTLVSIREFYRKDGKELPSSKGISLTAEQWSAFKKN 126

Query: 95  VEEINKAL 102
           V  I +A+
Sbjct: 127 VPAIEEAI 134


>gi|222619134|gb|EEE55266.1| hypothetical protein OsJ_03184 [Oryza sativa Japonica Group]
          Length = 315

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV+++ ++GK  + IRE+Y K+GK+ P  KGISL+V+QW   RD 
Sbjct: 241 DDEGDLILCRLSARRRVTLQEFKGKTLLSIREYYFKDGKELPA-KGISLTVEQWEAFRDS 299

Query: 95  VEEIN---KALGDNS 106
           V  I    K LG++S
Sbjct: 300 VPAIEDAIKKLGESS 314


>gi|255537849|ref|XP_002509991.1| RNA polymerase II transcriptional coactivator kelp, putative
           [Ricinus communis]
 gi|223549890|gb|EEF51378.1| RNA polymerase II transcriptional coactivator kelp, putative
           [Ricinus communis]
          Length = 151

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 51/74 (68%)

Query: 29  SKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQW 88
           SK    DD  D++VC +S+ R+V+++N++G   V IREFY K+GK+ P  KGISL  +QW
Sbjct: 71  SKEPEFDDDGDLIVCRLSEKRKVTIQNFRGTTLVSIREFYKKDGKELPTSKGISLKEEQW 130

Query: 89  NTLRDHVEEINKAL 102
           + L+ ++  I +A+
Sbjct: 131 SALKKNIPAIEEAI 144


>gi|115439469|ref|NP_001044014.1| Os01g0706000 [Oryza sativa Japonica Group]
 gi|13872930|dbj|BAB44036.1| transcriptional coactivator-like [Oryza sativa Japonica Group]
 gi|19571089|dbj|BAB86514.1| transcriptional coactivator-like [Oryza sativa Japonica Group]
 gi|113533545|dbj|BAF05928.1| Os01g0706000 [Oryza sativa Japonica Group]
 gi|125527421|gb|EAY75535.1| hypothetical protein OsI_03440 [Oryza sativa Indica Group]
 gi|215679062|dbj|BAG96492.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697829|dbj|BAG92022.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765526|dbj|BAG87223.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 184

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 4/75 (5%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV+++ ++GK  + IRE+Y K+GK+ P  KGISL+V+QW   RD 
Sbjct: 110 DDEGDLILCRLSARRRVTLQEFKGKTLLSIREYYFKDGKELPA-KGISLTVEQWEAFRDS 168

Query: 95  VEEIN---KALGDNS 106
           V  I    K LG++S
Sbjct: 169 VPAIEDAIKKLGESS 183


>gi|388517097|gb|AFK46610.1| unknown [Lotus japonicus]
          Length = 160

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 51/68 (75%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C++S+ R+V++++++GK  V IRE+Y K+GK  P  KGISL+ +QW+T + +
Sbjct: 86  DDDGDLIICKLSEKRKVTIQDFRGKTLVSIREYYRKDGKDLPTSKGISLTEEQWSTFKKN 145

Query: 95  VEEINKAL 102
           V  + KA+
Sbjct: 146 VPAVEKAI 153


>gi|449462521|ref|XP_004148989.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Cucumis sativus]
 gi|449506203|ref|XP_004162681.1| PREDICTED: RNA polymerase II transcriptional coactivator KELP-like
           [Cucumis sativus]
          Length = 158

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 51/75 (68%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
           A+K    DD  D++VC +S  R+V++++++GK  V IREFY K+GK  P  KGISL+ +Q
Sbjct: 76  AAKEKEYDDDGDLIVCWLSSKRKVTIQDFRGKTLVSIREFYRKDGKDLPTAKGISLTEEQ 135

Query: 88  WNTLRDHVEEINKAL 102
           W+  + +V  I KA+
Sbjct: 136 WSVFKKNVPAIEKAI 150


>gi|346472519|gb|AEO36104.1| hypothetical protein [Amblyomma maculatum]
          Length = 114

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 9/111 (8%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASK--------TDSSDDSDDIVVCEISKNRRVS 52
           MS K + K E + DSD   +   PP+K  K        T SS  +D+     I K R VS
Sbjct: 1   MSSKKRSKLESDSDSDSGPEDRNPPQKKGKVADNKNKSTASSSGADEDGKFMIGKKRYVS 60

Query: 53  VRNWQGKVWVDIREFYVKEGKKF-PGKKGISLSVDQWNTLRDHVEEINKAL 102
           VR ++G+V VDIRE+Y        PGKKGI L +DQWN L++ +++I+ A+
Sbjct: 61  VREFKGRVMVDIREYYEDSNCDLKPGKKGICLQLDQWNALKNQIDDIDAAI 111


>gi|170053011|ref|XP_001862481.1| p31A [Culex quinquefasciatus]
 gi|167873703|gb|EDS37086.1| p31A [Culex quinquefasciatus]
          Length = 107

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 7   RKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCE----ISKNRRVSVRNWQGKVWV 62
           +K+EE  DSD   +   P KK+     S         E    + KN++V+VR ++ KV+V
Sbjct: 5   KKKEETSDSDSGPEDRTPAKKSKSEAGSSGGAKNESGEPEWFLDKNKKVTVREFKNKVYV 64

Query: 63  DIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           DIREFY K+GK  PGKKG+SL V  W  L +  +E+N+A+
Sbjct: 65  DIREFYEKDGKMLPGKKGVSLQVPMWKKLLEISDEVNEAI 104


>gi|293332189|ref|NP_001170611.1| uncharacterized protein LOC100384655 [Zea mays]
 gi|238006358|gb|ACR34214.1| unknown [Zea mays]
 gi|413951045|gb|AFW83694.1| hypothetical protein ZEAMMB73_831324 [Zea mays]
          Length = 183

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 46/68 (67%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV++  ++G+  V IREFYVK+GK+ P  KGIS++++QW    + 
Sbjct: 109 DDQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGISMTLEQWEAFCNA 168

Query: 95  VEEINKAL 102
           V  I  A+
Sbjct: 169 VPAIEDAI 176


>gi|326470685|gb|EGD94694.1| hypothetical protein TESG_02202 [Trichophyton tonsurans CBS 112818]
 gi|326479602|gb|EGE03612.1| RNA polymerase II transcriptional coactivator [Trichophyton equinum
           CBS 127.97]
          Length = 177

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 55/76 (72%), Gaps = 4/76 (5%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       EIS+ RRV++  ++G+V V++RE+Y K+G++ PGKKGIS++++
Sbjct: 47  KAPKTDSNGDP----YWEISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLE 102

Query: 87  QWNTLRDHVEEINKAL 102
           Q+N+L   + EI+  +
Sbjct: 103 QFNSLVTLLPEISAVI 118


>gi|340381278|ref|XP_003389148.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Amphimedon queenslandica]
          Length = 112

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 7/109 (6%)

Query: 1   MSGKGKRKEEEEYD-SD-----GSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVR 54
           M+ K K K +E  D SD     GS    +  K A+ T  S D D   +  +S  R V+VR
Sbjct: 1   MASKRKAKSQEFIDDSDDPEDTGSKTKKSRTKSAAATTQSSDIDTEELIPLSAKRFVNVR 60

Query: 55  NWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++G++ +DIRE+YV  +G+  PGKKGISLSVDQW  L++ +E I++ +
Sbjct: 61  TFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109


>gi|356504175|ref|XP_003520874.1| PREDICTED: uncharacterized protein LOC100818901 [Glycine max]
          Length = 558

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 46/67 (68%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           D  + V+C +S  R V+V++++G   V IREFY+K+GK  PG KGISLS +QW+T +  V
Sbjct: 113 DDPERVICHLSNRRNVAVKDFKGTTLVSIREFYMKDGKPLPGSKGISLSSEQWSTFKKSV 172

Query: 96  EEINKAL 102
             I +A+
Sbjct: 173 PAIEEAI 179


>gi|315054717|ref|XP_003176733.1| hypothetical protein MGYG_08902 [Arthroderma gypseum CBS 118893]
 gi|311338579|gb|EFQ97781.1| hypothetical protein MGYG_08902 [Arthroderma gypseum CBS 118893]
          Length = 177

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 55/76 (72%), Gaps = 4/76 (5%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       EIS+ RRV++  ++G+V V++RE+Y K+G++ PGKKGIS++++
Sbjct: 48  KAPKTDSNGDP----YWEISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLE 103

Query: 87  QWNTLRDHVEEINKAL 102
           Q+N+L   + EI+  +
Sbjct: 104 QFNSLVTLLPEISAVV 119


>gi|452820654|gb|EME27694.1| KIWI [Galdieria sulphuraria]
          Length = 121

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 24  PPKKASKTDS-SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGIS 82
           PP K  K DS + D D     E+SK RRV+VR + GK+ VDIRE+Y       PG+KGIS
Sbjct: 37  PPTKVYKKDSWTRDCDGYPFFELSKTRRVTVRKFSGKMLVDIREYYNNGETLAPGRKGIS 96

Query: 83  LSVDQWNTLRDHVEEINKAL 102
           LS++Q+  L+ ++ +I+ A+
Sbjct: 97  LSIEQYEKLKSYLADIDDAI 116


>gi|302762971|ref|XP_002964907.1| hypothetical protein SELMODRAFT_83446 [Selaginella moellendorffii]
 gi|300167140|gb|EFJ33745.1| hypothetical protein SELMODRAFT_83446 [Selaginella moellendorffii]
          Length = 167

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 20  DGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP-GK 78
           D +A  +++SK   ++  D+I+ C++S  R VSV+N++GK  V IRE+Y K+GK  P  K
Sbjct: 81  DENAGSQESSKAMLAEGEDEII-CQLSGKRNVSVQNFRGKALVSIREYYEKDGKTLPSSK 139

Query: 79  KGISLSVDQWNTLRDHVEEINKAL 102
            GISL++DQW  L+  +  I +A+
Sbjct: 140 AGISLTIDQWEALKKELPAIRQAI 163


>gi|13699910|dbj|BAB41214.1| putative transcriptional coactivator [Brassica rapa]
          Length = 165

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 48/68 (70%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV+++ ++GK  V IRE+Y K+GK+ P  KGISL+ +QW+T + +
Sbjct: 91  DDDGDLIICRLSDKRRVTIQEFRGKSLVSIREYYKKDGKELPSSKGISLTDEQWSTFKKN 150

Query: 95  VEEINKAL 102
           +  I  A+
Sbjct: 151 IPAIEAAV 158


>gi|332021176|gb|EGI61561.1| Activated RNA polymerase II transcriptional coactivator p15
           [Acromyrmex echinatior]
          Length = 109

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 8/87 (9%)

Query: 14  DSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEG 72
           DS  + D   P KKA        +DD  V ++  NR+V+VRN++GK +VDIRE Y  KEG
Sbjct: 23  DSKATKDEKKPAKKAK-------TDDETVWDLGSNRQVNVRNFKGKYYVDIREMYYDKEG 75

Query: 73  KKFPGKKGISLSVDQWNTLRDHVEEIN 99
              PGKKGI LS+ QW    D VEE++
Sbjct: 76  DLKPGKKGICLSMQQWRKFMDVVEEVD 102


>gi|356571246|ref|XP_003553790.1| PREDICTED: uncharacterized protein LOC100800963 [Glycine max]
          Length = 515

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 47/67 (70%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           D  + V+C++S  R ++V++++G   V IREFY+K+GK  PG KGISLS +QW+T +  V
Sbjct: 101 DDPERVICQLSSRRNLAVKHFKGTTLVSIREFYMKDGKLLPGSKGISLSSEQWSTFKKSV 160

Query: 96  EEINKAL 102
             I +A+
Sbjct: 161 PAIEEAI 167


>gi|327308006|ref|XP_003238694.1| RNA polymerase II transcriptional coactivator [Trichophyton rubrum
           CBS 118892]
 gi|326458950|gb|EGD84403.1| RNA polymerase II transcriptional coactivator [Trichophyton rubrum
           CBS 118892]
          Length = 177

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 54/76 (71%), Gaps = 4/76 (5%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       EIS+ RRV++  ++G+V V++RE+Y K+G++ PGKKGIS++++
Sbjct: 47  KAPKTDSNGDP----YWEISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKKGISMTLE 102

Query: 87  QWNTLRDHVEEINKAL 102
           Q+N L   + EI+  +
Sbjct: 103 QFNNLVTLLPEISAVI 118


>gi|407922269|gb|EKG15373.1| Transcriptional coactivator p15 [Macrophomina phaseolina MS6]
          Length = 158

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 10/107 (9%)

Query: 4   KGKRKEEEEYDSDGSVDGH--APPKKASKTDSS------DDSDDIVVCEISKNRRVSVRN 55
           +G+++  ++Y+ DG V G   AP  K +K   S      D+ +D    E+S  RRV+V  
Sbjct: 9   RGRKRANDDYEDDGFVVGDDIAPKSKKTKKSQSAGKRVDDEGNDF--WELSAKRRVTVSE 66

Query: 56  WQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++GK  V IRE+Y K+GK  PGKKGISL++DQ+N L + + EI  AL
Sbjct: 67  FRGKSMVSIREYYEKDGKDLPGKKGISLTLDQYNALVELLPEIEAAL 113


>gi|301111890|ref|XP_002905024.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095354|gb|EEY53406.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 244

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 14  DSDGSVDGHAPPKKASKTDSSDDSDDI--VVCEISKNRRVSVRNWQGKVWVDIREFYVKE 71
           DSD  +   A  +KA +T +   + +   VV E+S  RRV+VR W+G  +VDIRE+Y  +
Sbjct: 60  DSDVPLARFAAQQKAKRTKTHGKTTEQGEVVFELSSKRRVTVRKWKGMKFVDIREYYDDK 119

Query: 72  GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           G+  PGKKGISLS DQW  L    + I +A+
Sbjct: 120 GQAKPGKKGISLSPDQWEKLFGFSDAIAEAI 150



 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 38/59 (64%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           +   +S  RRV+VR +   V +D+R FY ++G   PGKKGISLS DQW+ LR+   EI 
Sbjct: 180 IALPLSSKRRVTVRYFNNAVLIDLRGFYDQDGVSKPGKKGISLSKDQWDALREVAGEIT 238


>gi|15236980|ref|NP_192830.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana]
 gi|145333013|ref|NP_001078372.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana]
 gi|37079408|sp|O65155.1|KELP_ARATH RecName: Full=RNA polymerase II transcriptional coactivator KELP
 gi|2997686|gb|AAC08575.1| putative transcriptional co-activator [Arabidopsis thaliana]
 gi|3513735|gb|AAC33951.1| contains similarity to RNA polymerase II transcription cofactor p15
           [Arabidopsis thaliana]
 gi|4539366|emb|CAB40060.1| putative protein [Arabidopsis thaliana]
 gi|7267790|emb|CAB81193.1| putative protein [Arabidopsis thaliana]
 gi|21554027|gb|AAM63108.1| putative transcriptional coactivator [Arabidopsis thaliana]
 gi|29028806|gb|AAO64782.1| At4g10920 [Arabidopsis thaliana]
 gi|110736559|dbj|BAF00245.1| hypothetical protein [Arabidopsis thaliana]
 gi|110738319|dbj|BAF01087.1| hypothetical protein [Arabidopsis thaliana]
 gi|332657543|gb|AEE82943.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana]
 gi|332657544|gb|AEE82944.1| RNA polymerase II transcriptional coactivator KELP [Arabidopsis
           thaliana]
          Length = 165

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 48/68 (70%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++C +S  RRV+++ ++GK  V IRE+Y K+GK+ P  KGISL+ +QW+T + +
Sbjct: 91  DDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKN 150

Query: 95  VEEINKAL 102
           +  I  A+
Sbjct: 151 MPAIENAV 158


>gi|219121989|ref|XP_002181338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407324|gb|EEC47261.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 118

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 9/81 (11%)

Query: 31  TDSSDDSDDIVV-------CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISL 83
           TD+ D S  I +        E+SK RRV+VR ++G   VDIRE+Y K  K  PGKKGISL
Sbjct: 34  TDAPDFSSTIRINEEGDSFFELSKTRRVTVRQFKGTTLVDIREYYEKGDKLMPGKKGISL 93

Query: 84  SVDQWNTLRDHVEE--INKAL 102
           ++DQ+N  +D ++   ++KAL
Sbjct: 94  TLDQFNEFKDVIQSGLVDKAL 114


>gi|255087903|ref|XP_002505874.1| transcriptional coactivator p15 [Micromonas sp. RCC299]
 gi|226521145|gb|ACO67132.1| transcriptional coactivator p15 [Micromonas sp. RCC299]
          Length = 411

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 42/65 (64%)

Query: 39  DIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           D  VC + ++RRV+V  + G V + IREFY K+G K PGKKGISLS DQW  +  H + I
Sbjct: 345 DATVCVLGRDRRVTVDIFNGSVMIGIREFYEKDGAKLPGKKGISLSKDQWELVTRHEDLI 404

Query: 99  NKALG 103
             A G
Sbjct: 405 EAACG 409



 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 45/63 (71%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           +C +S+ RR +V +++GK +V +RE+Y K+G   PGKKGISL  +QW+ LR  + E+N+ 
Sbjct: 274 ICALSRARRCTVSDFRGKKYVGLREYYEKDGVWLPGKKGISLPYEQWSQLRSKIGEVNQR 333

Query: 102 LGD 104
           + D
Sbjct: 334 IAD 336


>gi|383865868|ref|XP_003708394.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Megachile rotundata]
          Length = 118

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 64/104 (61%), Gaps = 8/104 (7%)

Query: 4   KGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVD 63
           K KRK++ E D  G         K SK +SS++ D     ++  NR+V+VR+++GK++VD
Sbjct: 22  KSKRKQKREIDDTGE-----KTSKKSKRESSENQD--YTWDLGNNRQVTVRDFKGKIYVD 74

Query: 64  IREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           IRE Y  K+G   PGKKGI LSV QW  L   +E+++KA+   S
Sbjct: 75  IREMYFDKDGNLKPGKKGICLSVAQWRKLSAVIEDVDKAVHSKS 118


>gi|67539272|ref|XP_663410.1| hypothetical protein AN5806.2 [Aspergillus nidulans FGSC A4]
 gi|40739125|gb|EAA58315.1| hypothetical protein AN5806.2 [Aspergillus nidulans FGSC A4]
 gi|259480040|tpe|CBF70810.1| TPA: RNA polymerase II transcriptional coactivator, putative
           (AFU_orthologue; AFUA_2G07460) [Aspergillus nidulans
           FGSC A4]
          Length = 168

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 4/83 (4%)

Query: 20  DGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKK 79
           D   P   A K DS+ D    +  EISK RRV++ +++GK  V+IRE+Y K+G++ PGKK
Sbjct: 38  DNSRPELVARKEDSNGD----IYWEISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKK 93

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GISL +DQ+++L   + EI   L
Sbjct: 94  GISLPIDQFSSLVTLLPEIEIVL 116


>gi|46137341|ref|XP_390362.1| hypothetical protein FG10186.1 [Gibberella zeae PH-1]
          Length = 148

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V ++  K +V+IRE+Y K+GK  PGKKGISLS++Q+N     V  IN AL
Sbjct: 45  ELSNKRRVGVSDFSSKTFVNIREYYEKDGKTLPGKKGISLSIEQYNAFLKAVPRINAAL 103


>gi|242775903|ref|XP_002478733.1| RNA polymerase II transcriptional coactivator, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218722352|gb|EED21770.1| RNA polymerase II transcriptional coactivator, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 157

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
           +S T+ +D + DI   +IS +RRV++  ++GK  V+IRE+Y K+G++ PGKKGISL ++Q
Sbjct: 41  SSSTNKTDANGDIY-WDISSHRRVTISEFRGKSMVNIREYYEKDGQELPGKKGISLPIEQ 99

Query: 88  WNTLRDHVEEINKAL 102
           ++ L  H+ EI + L
Sbjct: 100 FSALVSHLPEIEQVL 114


>gi|408397064|gb|EKJ76215.1| hypothetical protein FPSE_03690 [Fusarium pseudograminearum CS3096]
          Length = 148

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V ++  K +V+IRE+Y K+GK  PGKKGISLS++Q+N     V  IN AL
Sbjct: 45  ELSNKRRVGVSDFSSKTFVNIREYYEKDGKTLPGKKGISLSIEQYNAFLKAVPRINAAL 103


>gi|350399755|ref|XP_003485628.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Bombus impatiens]
          Length = 115

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 8/104 (7%)

Query: 4   KGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVD 63
           K KR+++E  D  G V    P K+++K       D+  V ++  NR++S+R+++GK++VD
Sbjct: 19  KTKRQKKEIEDKKGKVSKKMPEKESNK-------DEDTVWDLGNNRQISIRDFKGKLYVD 71

Query: 64  IREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           IRE Y  KE    PGKKGI LS+ QW  L   V++++KA+   S
Sbjct: 72  IREMYYDKEANLKPGKKGICLSIGQWQKLLSVVDDVDKAVKSKS 115


>gi|195646934|gb|ACG42935.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
 gi|414880807|tpg|DAA57938.1| TPA: RNA polymerase II transcriptional coactivator KELP [Zea mays]
          Length = 140

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 44/67 (65%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           D  D+++C +S  RRV++  ++G+  V IREFYVK+GK+ P  KGIS++++QW    +  
Sbjct: 67  DQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGISMTMEQWEAFCNAA 126

Query: 96  EEINKAL 102
             I  A+
Sbjct: 127 PAIEDAI 133


>gi|294463357|gb|ADE77213.1| unknown [Picea sitchensis]
          Length = 197

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 47/68 (69%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD+ D+++C+++  R VSV+ ++G   V IRE+Y K+GK+ P  KGISL++DQW   +  
Sbjct: 126 DDNGDVIICKLNSRRNVSVQEFKGNKLVSIREYYEKDGKQLPTSKGISLTIDQWKAFKKG 185

Query: 95  VEEINKAL 102
           V  I +A+
Sbjct: 186 VPAIVEAI 193


>gi|115760344|ref|XP_001177085.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Strongylocentrotus purpuratus]
          Length = 115

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 33  SSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTL 91
           SSD++D   +  +S+ R V+VR ++GKV +DIRE+Y KE G   PGKKGISL+VDQW  L
Sbjct: 41  SSDENDTSEMFSLSRQRFVNVREFRGKVLIDIREYYEKEVGDLLPGKKGISLTVDQWRKL 100

Query: 92  RDHVEEIN 99
              V++I+
Sbjct: 101 VSQVDDID 108


>gi|302653276|ref|XP_003018466.1| RNA polymerase II transcriptional coactivator, putative
           [Trichophyton verrucosum HKI 0517]
 gi|291182115|gb|EFE37821.1| RNA polymerase II transcriptional coactivator, putative
           [Trichophyton verrucosum HKI 0517]
          Length = 177

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 54/76 (71%), Gaps = 4/76 (5%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       EIS+ RRV++  ++G+V V++ E+Y K+G++ PGKKGIS++++
Sbjct: 47  KAPKTDSNGDP----YWEISRQRRVTISTFKGRVLVNVSEYYEKDGQELPGKKGISMTLE 102

Query: 87  QWNTLRDHVEEINKAL 102
           Q+N+L   + EI+  +
Sbjct: 103 QFNSLVTLLPEISAVI 118


>gi|363743663|ref|XP_001234815.2| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Gallus gallus]
          Length = 126

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 22  HAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKG 80
            A P + +      DS++  + +I K R V V  + GKV VDIREFY+ KEG   PG+KG
Sbjct: 42  EARPSRVAAKPQGRDSEEGGMFQIGKMRYVRVSCFNGKVLVDIREFYMDKEGDMKPGRKG 101

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           I+LS +QWN L++ + EI+ A+
Sbjct: 102 IALSAEQWNQLKEIIPEIDAAV 123


>gi|340712441|ref|XP_003394768.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Bombus terrestris]
          Length = 115

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 8/104 (7%)

Query: 4   KGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVD 63
           K KR+++E  D  G+V    P ++++K       D+  V ++  NR++S+R+++GK++VD
Sbjct: 19  KPKRQKKEIEDKKGNVSKKIPERESNK-------DEDTVWDLGNNRQISIRDFKGKLYVD 71

Query: 64  IREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           IRE Y  KE    PGKKGI LS+ QW+ L   V++++KA+   S
Sbjct: 72  IREMYYDKEANLKPGKKGICLSISQWHKLLSVVDDVDKAVKSKS 115


>gi|255935915|ref|XP_002558984.1| Pc13g05500 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583604|emb|CAP91619.1| Pc13g05500 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1112

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 8/108 (7%)

Query: 1    MSGKGKRKEEEEYDSDGSVDGHAPPKKA---SKTDSSDDSDDIVVCEISKNRRVSVRNWQ 57
            MS K +  E     S   +D    PKKA   +  ++  DS+     EISK RRV++ +++
Sbjct: 964  MSSKKRSSE-----SVAGLDNSVRPKKAKVNTTAEAKTDSNGDRYWEISKMRRVTISSFR 1018

Query: 58   GKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDN 105
            GK  V++RE+Y K+G++ PGKKGIS+ VDQ+  +   + EI +AL +N
Sbjct: 1019 GKTQVNVREYYEKDGQELPGKKGISMPVDQFAAIVSLLPEIEEALKEN 1066


>gi|238578726|ref|XP_002388815.1| hypothetical protein MPER_12124 [Moniliophthora perniciosa FA553]
 gi|215450444|gb|EEB89745.1| hypothetical protein MPER_12124 [Moniliophthora perniciosa FA553]
          Length = 149

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 8/88 (9%)

Query: 27  KASKTDSSDDSDDIV--------VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGK 78
           K++KT SSDD D  V          ++ K +R +VR+++GK  VDIREFY  EG++ PGK
Sbjct: 61  KSTKTTSSDDGDVTVHKNSEGDSYVDLGKKKRATVRSFKGKPLVDIREFYGDEGQEKPGK 120

Query: 79  KGISLSVDQWNTLRDHVEEINKALGDNS 106
           KGISL+ +QW  L+  +  I++   + +
Sbjct: 121 KGISLTDEQWEMLKKRMPVIDRLFKEQT 148


>gi|342887565|gb|EGU87047.1| hypothetical protein FOXB_02441 [Fusarium oxysporum Fo5176]
          Length = 148

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 41/59 (69%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V ++  K +V+IRE+Y K+GK  PGKKGISLS++Q+N     V  IN AL
Sbjct: 45  ELSNKRRVGVSDFSKKTFVNIREYYDKDGKTLPGKKGISLSIEQYNAFLKAVPHINAAL 103


>gi|224058170|ref|XP_002299459.1| predicted protein [Populus trichocarpa]
 gi|222846717|gb|EEE84264.1| predicted protein [Populus trichocarpa]
          Length = 156

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 48/70 (68%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  ++V+C +S  R+V+++N++G   V IRE+Y   G + P  KGISL+ +QW+TLR +
Sbjct: 81  DDEGNLVICRLSAKRKVTIQNFRGANLVSIREYYYDGGAERPTTKGISLNEEQWSTLRKN 140

Query: 95  VEEINKALGD 104
           +  I KA+ D
Sbjct: 141 IPAIEKAVKD 150


>gi|296821528|ref|XP_002850145.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238837699|gb|EEQ27361.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 176

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 51/72 (70%), Gaps = 4/72 (5%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       E+S+ RRV++  ++G+V V++RE+Y K+G+  PGKKGIS++++
Sbjct: 51  KAPKTDSNGDP----YWEVSRQRRVTISTFKGRVLVNVREYYEKDGQDLPGKKGISMTLE 106

Query: 87  QWNTLRDHVEEI 98
           Q+N L   + EI
Sbjct: 107 QFNNLIALLPEI 118


>gi|357618935|gb|EHJ71719.1| putative RNA polymerase II transcriptional coactivator [Danaus
           plexippus]
          Length = 106

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 3/86 (3%)

Query: 18  SVDGHAPPKKASKTDS-SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP 76
            VD + PP+K +K  S +DD +   V E  K   V VR ++G+V++DIREFY K G+  P
Sbjct: 19  PVDRNPPPEKKAKMGSRTDDKEPTWVLEGKK--LVKVREFKGRVFIDIREFYEKNGELLP 76

Query: 77  GKKGISLSVDQWNTLRDHVEEINKAL 102
           GKKGISL+ D W  L    +EIN+ +
Sbjct: 77  GKKGISLTPDMWRKLLSLGDEINETV 102


>gi|321473544|gb|EFX84511.1| hypothetical protein DAPPUDRAFT_47108 [Daphnia pulex]
          Length = 62

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 45/58 (77%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           + K R + VR+W+GK ++DIRE+Y K+GK+ PGKKGISL+  QW+ L+  + E+++AL
Sbjct: 2   LDKQRVLKVRSWRGKTFIDIREYYEKDGKQLPGKKGISLNSSQWSKLKSIISEVDEAL 59


>gi|350636730|gb|EHA25088.1| hypothetical protein ASPNIDRAFT_185776 [Aspergillus niger ATCC
           1015]
          Length = 166

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 48/69 (69%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           DS+  +  EISK RRV++ +++GK  V+IRE+Y K+G + PGKKGISL +DQ+++L   +
Sbjct: 50  DSNGDLYWEISKARRVTISSFRGKTLVNIREYYEKDGHELPGKKGISLPIDQFSSLVSLL 109

Query: 96  EEINKALGD 104
             I   L D
Sbjct: 110 PHIETTLQD 118


>gi|162809318|dbj|BAF95583.1| putative RNA polymerase II transcriptional coactivator [Antheraea
           yamamai]
          Length = 83

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 23  APPKKASKTDS-SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
           APP+K +K  S +DD +   V E  K   V VR ++GKV+VDIREFY K G+  PGKKGI
Sbjct: 1   APPEKKAKMGSRTDDKEPTWVLEGKK--LVKVREFKGKVYVDIREFYEKNGELLPGKKGI 58

Query: 82  SLSVDQWNTLRDHVEEINKAL 102
           S++ +QW  L    +E+N+ +
Sbjct: 59  SMTPEQWRKLLSLSDEVNETI 79


>gi|226499846|ref|NP_001151972.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
 gi|195651445|gb|ACG45190.1| RNA polymerase II transcriptional coactivator KELP [Zea mays]
          Length = 128

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 40/56 (71%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
           D  D+++C +S  RRV++  ++G+  V IREFYVK+GK+ P  KGIS++++QW   
Sbjct: 67  DQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGISMTMEQWEAF 122


>gi|212532551|ref|XP_002146432.1| RNA polymerase II transcriptional coactivator, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210071796|gb|EEA25885.1| RNA polymerase II transcriptional coactivator, putative
           [Talaromyces marneffei ATCC 18224]
          Length = 158

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 12/114 (10%)

Query: 1   MSGKGKRKEEEEYDSDGSV--DGHAPPKKASKTDSS----------DDSDDIVVCEISKN 48
           MS K K++  E    DG V  D ++   K +KT  S           DS+  V  ++S  
Sbjct: 1   MSFKSKKRSSEYQSDDGFVVDDNNSRGAKKAKTKGSLLDASSSTQKTDSNGDVYWDLSSQ 60

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RRV++  ++GK  V IRE+Y K+G+  PGKKGISL +DQ+N L   + +I + L
Sbjct: 61  RRVTISEFRGKSLVSIREYYEKDGQSLPGKKGISLPIDQFNALISLLPDIEQVL 114


>gi|121698023|ref|XP_001267689.1| RNA polymerase II transcriptional coactivator, putative
           [Aspergillus clavatus NRRL 1]
 gi|119395831|gb|EAW06263.1| RNA polymerase II transcriptional coactivator, putative
           [Aspergillus clavatus NRRL 1]
          Length = 172

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 47/59 (79%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+SK RRV+V +++GK +++IRE+Y ++G++ PGKKGISL +DQ+++L   + +I  AL
Sbjct: 60  ELSKMRRVTVSSFRGKTFINIREYYERDGQELPGKKGISLPIDQFSSLVTLLPDIETAL 118


>gi|302912967|ref|XP_003050815.1| hypothetical protein NECHADRAFT_100558 [Nectria haematococca mpVI
           77-13-4]
 gi|256731753|gb|EEU45102.1| hypothetical protein NECHADRAFT_100558 [Nectria haematococca mpVI
           77-13-4]
          Length = 151

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RR+ V  ++   +++IRE+Y K+GK  PGKKGISLSVDQ+N L   +  IN AL
Sbjct: 49  ELSNKRRIGVSQFKKMSFINIREYYDKDGKTLPGKKGISLSVDQYNALIKAIPAINAAL 107


>gi|345564855|gb|EGX47814.1| hypothetical protein AOL_s00083g26 [Arthrobotrys oligospora ATCC
           24927]
          Length = 241

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 44/60 (73%)

Query: 47  KNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           K+RRV+V  ++G V V +RE+Y K+GK FPGKKGIS+S+DQ+N L   +  + +A+G  S
Sbjct: 71  KSRRVTVSEFKGNVLVSVREYYEKDGKYFPGKKGISMSLDQFNQLIKVLPALEEAIGQKS 130


>gi|453084928|gb|EMF12972.1| RNA polymerase II transcriptional coactivator [Mycosphaerella
           populorum SO2202]
          Length = 172

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 12/109 (11%)

Query: 6   KRKEEEEYDSDGSV------DGHAPPKKASKTDSSD------DSDDIVVCEISKNRRVSV 53
           KR   E YDSDG        D     KK+    S D      D D  V  EIS  RR+ +
Sbjct: 3   KRAAAETYDSDGGFVENEEEDARRSKKKSRANTSKDLPTKGKDKDGGVYWEISGKRRLQL 62

Query: 54  RNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             ++G   V +RE+Y K+G+  PGKKGIS+++DQ+NT+ + + ++   L
Sbjct: 63  SEFKGNTMVGVREYYEKDGQALPGKKGISMTLDQFNTIVELLPQLESEL 111


>gi|118363412|ref|XP_001014607.1| Putative RNA polymerase II transcriptional coactivator [Tetrahymena
           thermophila]
 gi|89296698|gb|EAR94686.1| Putative RNA polymerase II transcriptional coactivator [Tetrahymena
           thermophila SB210]
          Length = 84

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 45/64 (70%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           +  E+   +RV+VR ++GK++VDIREFY K+G+  PGKKGISL++  W   R  ++ I++
Sbjct: 20  LYFELDDKKRVTVRKFKGKLYVDIREFYEKDGEMLPGKKGISLNLQNWEQFRSLIDSIDQ 79

Query: 101 ALGD 104
            + D
Sbjct: 80  CITD 83


>gi|317157492|ref|XP_001826504.2| RNA polymerase II transcriptional coactivator [Aspergillus oryzae
           RIB40]
 gi|391868223|gb|EIT77442.1| hypothetical protein Ao3042_06381 [Aspergillus oryzae 3.042]
          Length = 173

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 45/61 (73%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           EISK RRV++ +++GK  V+IRE+Y K+G++ PGKKGISL +DQ+ +L   + +I   L 
Sbjct: 59  EISKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFASLVTLLPDIELTLK 118

Query: 104 D 104
           D
Sbjct: 119 D 119


>gi|425772282|gb|EKV10692.1| hypothetical protein PDIG_55300 [Penicillium digitatum PHI26]
 gi|425782745|gb|EKV20638.1| hypothetical protein PDIP_14650 [Penicillium digitatum Pd1]
          Length = 1008

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 11/88 (12%)

Query: 25  PKKA-------SKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPG 77
           PKKA       +KTDS+ D       EISK RRV++ +++GK  V++RE+Y K G++ PG
Sbjct: 879 PKKAKVNTSPEAKTDSNGDR----YWEISKMRRVTISSFRGKTQVNVREYYEKNGQELPG 934

Query: 78  KKGISLSVDQWNTLRDHVEEINKALGDN 105
           KKGIS+ VDQ+  +   + EI + L  N
Sbjct: 935 KKGISMPVDQFAAIISILPEIEQELKGN 962


>gi|71000802|ref|XP_755082.1| RNA polymerase II transcriptional coactivator [Aspergillus
           fumigatus Af293]
 gi|66852720|gb|EAL93044.1| RNA polymerase II transcriptional coactivator, putative
           [Aspergillus fumigatus Af293]
 gi|159129181|gb|EDP54295.1| RNA polymerase II transcriptional coactivator, putative
           [Aspergillus fumigatus A1163]
          Length = 165

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 45/59 (76%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+SK RRV++ +++GK  V+IRE+Y K+G++ PGKKGISL +DQ++ L   + +I  AL
Sbjct: 57  ELSKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFSVLVTLLPDIEMAL 115


>gi|157278175|ref|NP_001098187.1| general transcriptional coactivator [Oryzias latipes]
 gi|51465798|dbj|BAD36841.1| general transcriptional coactivator [Oryzias latipes]
          Length = 125

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 50/62 (80%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ ++G+  PGKKGISL+ +QWN L+D + EI++
Sbjct: 61  MFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQMSEIDE 120

Query: 101 AL 102
           A+
Sbjct: 121 AI 122


>gi|225704796|gb|ACO08244.1| Activated RNA polymerase II transcriptional coactivator p15
           [Oncorhynchus mykiss]
          Length = 132

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSGNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMRPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|119480475|ref|XP_001260266.1| RNA polymerase II transcriptional coactivator, putative
           [Neosartorya fischeri NRRL 181]
 gi|119408420|gb|EAW18369.1| RNA polymerase II transcriptional coactivator, putative
           [Neosartorya fischeri NRRL 181]
          Length = 165

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 45/59 (76%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+SK RRV++ +++GK  V+IRE+Y K+G++ PGKKGISL +DQ++ L   + +I  AL
Sbjct: 57  ELSKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFSVLVTLLPDIEMAL 115


>gi|348539212|ref|XP_003457083.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Oreochromis niloticus]
          Length = 125

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ ++G+  PGKKGISL+ +QWN L+D + EI+ 
Sbjct: 61  MFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQISEIDD 120

Query: 101 AL 102
           A+
Sbjct: 121 AI 122


>gi|259089339|ref|NP_001158706.1| Activated RNA polymerase II transcriptional coactivator p15
           [Oncorhynchus mykiss]
 gi|225704320|gb|ACO08006.1| Activated RNA polymerase II transcriptional coactivator p15
           [Oncorhynchus mykiss]
          Length = 132

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSGNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|213514016|ref|NP_001134477.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|209733326|gb|ACI67532.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|209733612|gb|ACI67675.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|290562107|gb|ADD38450.1| Activated RNA polymerase II transcriptional coactivator p15
           [Lepeophtheirus salmonis]
          Length = 132

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSGNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|221221586|gb|ACM09454.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
          Length = 132

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSGNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|221219230|gb|ACM08276.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|221222044|gb|ACM09683.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|225710320|gb|ACO11006.1| Activated RNA polymerase II transcriptional coactivator p15
           [Caligus rogercresseyi]
          Length = 132

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSRNQDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|83775248|dbj|BAE65371.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 216

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 45/61 (73%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           EISK RRV++ +++GK  V+IRE+Y K+G++ PGKKGISL +DQ+ +L   + +I   L 
Sbjct: 59  EISKMRRVTISSFRGKTLVNIREYYEKDGQELPGKKGISLPIDQFASLVTLLPDIELTLK 118

Query: 104 D 104
           D
Sbjct: 119 D 119


>gi|223646418|gb|ACN09967.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|223672265|gb|ACN12314.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
          Length = 150

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 70  PGGTSKGSGNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 128

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 129 NPEQWNQLKDQISEIDDAV 147


>gi|389741518|gb|EIM82706.1| PC4-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 151

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 42/61 (68%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++ K RR +VR ++  V VDIREFY + G + PGKKGISL+VDQW +LR+  + I+  +
Sbjct: 88  IDLGKKRRATVRKYKSAVLVDIREFYGEAGDEKPGKKGISLTVDQWQSLREASDTIDSLI 147

Query: 103 G 103
            
Sbjct: 148 A 148


>gi|225715558|gb|ACO13625.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
           lucius]
          Length = 130

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   S+  ++ D DD    +I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 50  PGGTSRESTNKDKDDNKF-QIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 108

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 109 NPEQWNQLKDQISEIDDAV 127


>gi|303286889|ref|XP_003062734.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
 gi|226456251|gb|EEH53553.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
          Length = 442

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 46/64 (71%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           D+ D  +C +S+ +R+ V  ++G+  V +RE+Y K+GK  PGKKGISL+ +QW+ LRD +
Sbjct: 295 DAVDGQICALSRQKRLVVGEYRGRKNVSLREYYEKDGKWLPGKKGISLAPEQWSILRDSI 354

Query: 96  EEIN 99
           + +N
Sbjct: 355 QGVN 358



 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 39  DIVVCEISKN--RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVE 96
           D  V +++ N  RRV+V  ++    V +REFY K+GK  PG KGIS+  +QW  +  H  
Sbjct: 374 DECVVKLNPNGSRRVTVGTFRNATMVGVREFYEKDGKWLPGMKGISMPTEQWEQVVKHAG 433

Query: 97  EINKALG 103
           ++++ALG
Sbjct: 434 KVDEALG 440


>gi|427786067|gb|JAA58485.1| Putative activated rna polymerase ii transcriptional coactivator
           p15-like protein [Rhipicephalus pulchellus]
          Length = 113

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKK 79
           G A   K   + SS D++D +   ++K R V+VR ++G+V VDIRE+Y    G   PGKK
Sbjct: 29  GKAADNKGKGSSSSGDNEDGMFM-LAKKRYVTVREFKGRVMVDIREYYEDGNGDLKPGKK 87

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GI L +DQWN L++ +++I+ A+
Sbjct: 88  GICLQLDQWNALKNQIDDIDAAI 110


>gi|443698153|gb|ELT98290.1| hypothetical protein CAPTEDRAFT_102830 [Capitella teleta]
          Length = 80

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 48/60 (80%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            +I+KNR V++  ++GK +V+IRE+Y  +G+  PG+KGI+L+ +QW  L++H+++I+KAL
Sbjct: 18  FQIAKNRYVTISEFKGKKYVNIREYYDADGEMKPGRKGIALNSEQWANLKEHIDDIDKAL 77


>gi|225560385|gb|EEH08666.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 156

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 4/85 (4%)

Query: 18  SVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPG 77
           ++ G + P    K DS+ D        IS+ RR++V +++G++ V +RE+Y K+G++ PG
Sbjct: 36  TIIGTSFPASEKKIDSNGD----FYWNISRLRRLTVSSFKGRILVSVREYYEKDGQELPG 91

Query: 78  KKGISLSVDQWNTLRDHVEEINKAL 102
           KKGIS+ +DQ+NTL   +  +  A+
Sbjct: 92  KKGISMPLDQFNTLIQLIPNVETAI 116


>gi|321454798|gb|EFX65953.1| hypothetical protein DAPPUDRAFT_65100 [Daphnia pulex]
          Length = 64

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 43/54 (79%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R + V++W+GK ++DIRE+Y K+GK+ PGKKGISL+  QWN L+  + E+++AL
Sbjct: 8   RVLKVQSWRGKTFIDIREYYEKDGKQLPGKKGISLNSTQWNKLKSIISEVDEAL 61


>gi|297813541|ref|XP_002874654.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320491|gb|EFH50913.1| hypothetical protein ARALYDRAFT_489930 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 165

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 47/68 (69%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           DD  D+++  +S  RRV+++ ++GK  V IRE+Y K+GK+ P  KGISL+ +QW+T + +
Sbjct: 91  DDDGDLIIWRLSDKRRVTIQEFKGKTLVSIREYYKKDGKELPTSKGISLTDEQWSTFKKN 150

Query: 95  VEEINKAL 102
           +  I  A+
Sbjct: 151 IPAIENAV 158


>gi|240279940|gb|EER43444.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           capsulatus H143]
 gi|325088656|gb|EGC41966.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           capsulatus H88]
          Length = 156

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 4/85 (4%)

Query: 18  SVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPG 77
           ++ G + P    K DS+ D        IS+ RR++V +++G++ V +RE+Y K+G++ PG
Sbjct: 36  TIVGTSFPASEKKIDSNGD----FYWNISRLRRLTVSSFKGRILVSVREYYEKDGQELPG 91

Query: 78  KKGISLSVDQWNTLRDHVEEINKAL 102
           KKGIS+ +DQ+NTL   +  +  A+
Sbjct: 92  KKGISMPLDQFNTLIQLIPNVETAI 116


>gi|358059066|dbj|GAA95005.1| hypothetical protein E5Q_01660 [Mixia osmundae IAM 14324]
          Length = 185

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 37/51 (72%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           +S +RRV+VR + GK  +DIRE Y K+GK  PGKKGISL+ DQW  L D V
Sbjct: 122 LSGSRRVTVRVYNGKPLIDIRETYEKDGKVLPGKKGISLNADQWAALSDPV 172


>gi|363747248|ref|XP_001236661.2| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Gallus gallus]
          Length = 126

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 56/76 (73%), Gaps = 4/76 (5%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           ASK  S+ D +   + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 51  ASKQSSNRDEN---MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 107

Query: 87  QWNTLRDHVEEINKAL 102
           QWN L++ + +I+ A+
Sbjct: 108 QWNQLKEQISDIDDAV 123


>gi|50554237|ref|XP_504527.1| YALI0E28897p [Yarrowia lipolytica]
 gi|49650396|emb|CAG80130.1| YALI0E28897p [Yarrowia lipolytica CLIB122]
          Length = 136

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 42/61 (68%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           V E+  ++RV+VR ++G+  +DIR FY K+GKK PG KGISL+  Q+  L + V+ I  A
Sbjct: 6   VFELGNDKRVTVREFKGRTLIDIRAFYEKDGKKLPGSKGISLTEAQFEELSEQVQSIQDA 65

Query: 102 L 102
           +
Sbjct: 66  V 66


>gi|389610155|dbj|BAM18689.1| single stranded-binding protein c31A [Papilio xuthus]
          Length = 105

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 3/87 (3%)

Query: 17  GSVDGHAPPKKASKTDS-SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKF 75
           G VD + P +K +K  S ++D +   V +  K   V VR ++GKV+VD+REFY K G   
Sbjct: 17  GPVDRNQPAEKKAKMGSRTEDKEPTWVLQGKK--LVKVRTFKGKVYVDVREFYEKNGDLL 74

Query: 76  PGKKGISLSVDQWNTLRDHVEEINKAL 102
           PGKKGISL+ +QW  L     EIN+ +
Sbjct: 75  PGKKGISLTPEQWRKLLSLGNEINETI 101


>gi|194863061|ref|XP_001970257.1| GG10524 [Drosophila erecta]
 gi|190662124|gb|EDV59316.1| GG10524 [Drosophila erecta]
          Length = 110

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 22  HAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
            +P  K+++ DS    +D     +   R+V +  ++G+  VDIREFY K G+  PGKKGI
Sbjct: 30  ESPAPKSARQDSG--GNDTTTWTLEGLRQVRINEFRGRKMVDIREFYEKGGETLPGKKGI 87

Query: 82  SLSVDQWNTLRDHVEEINKAL 102
           SLSV QW  L +  EE+ +A+
Sbjct: 88  SLSVKQWKKLLEVAEEVTRAV 108


>gi|221219846|gb|ACM08584.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
          Length = 132

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P   SK   + D DD     I K R VSVR ++GK  +DIRE+++ +EG+  PG+KGISL
Sbjct: 52  PGGTSKGSGNKDKDDNKF-RIGKMRYVSVREFKGKCLIDIREYWMDQEGEMKPGRKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + EI+ A+
Sbjct: 111 NPEQWNQLKDQISEIDDAV 129


>gi|168056620|ref|XP_001780317.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668265|gb|EDQ54876.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 165

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 44/68 (64%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           D+  +I++CE+S  R+V V  ++GK  + +RE+Y ++GK  P  KGISL+ +Q+  L   
Sbjct: 94  DEEGNIIICELSAKRKVVVSQFRGKTLISVREYYERDGKVLPSAKGISLTAEQFQVLAKS 153

Query: 95  VEEINKAL 102
            +++  A+
Sbjct: 154 AKDVEAAI 161


>gi|442747639|gb|JAA65979.1| Putative transcriptional coactivator p15 [Ixodes ricinus]
 gi|442747641|gb|JAA65980.1| Putative transcriptional coactivator p15 [Ixodes ricinus]
          Length = 114

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 26  KKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLS 84
           KK +      ++D      ++K R ++VR ++G+V VDIREFY    G   PGKKGI L 
Sbjct: 34  KKTASASQDTNADGEARFMLAKKRYLTVREFKGRVMVDIREFYEDNNGDLKPGKKGICLQ 93

Query: 85  VDQWNTLRDHVEEINKAL 102
           +DQWN L+ H+++I+ A+
Sbjct: 94  LDQWNALKGHIDDIDAAI 111


>gi|213404480|ref|XP_002173012.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212001059|gb|EEB06719.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 137

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 7/87 (8%)

Query: 24  PPKKASKTDSSDD-------SDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP 76
           PPK++  T S+ D        +   +   S  +RV++  ++GK +V IRE+Y K+G+  P
Sbjct: 2   PPKRSRTTKSTSDLSKKQKKDEHEWMINDSTKKRVTISQFKGKDYVHIREYYEKDGEFRP 61

Query: 77  GKKGISLSVDQWNTLRDHVEEINKALG 103
           G KGI+L++D+W     +V E+NKALG
Sbjct: 62  GAKGIALNIDEWKQFTTYVNEVNKALG 88


>gi|440796525|gb|ELR17634.1| RNA polymerase II transcriptional coactivator, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 124

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 43/60 (71%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           EI   RRV+V  ++ ++ +DIRE+Y K+G+  PG+KGISL+  QW  L+D + E++ ALG
Sbjct: 64  EIGSKRRVTVSKFRNQLKIDIREYYEKDGELLPGRKGISLNEQQWQNLKDIISEVDAALG 123


>gi|298708668|emb|CBJ26155.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 128

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 43/57 (75%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
            E+   + V VR ++GK++VDIRE+Y K+G+  PGKKGISLS + W  L++++++IN
Sbjct: 64  IELGNKKFVDVREFKGKIYVDIREYYEKDGEMRPGKKGISLSTEHWEVLKENMDDIN 120


>gi|358369717|dbj|GAA86330.1| hypothetical protein AKAW_04444 [Aspergillus kawachii IFO 4308]
          Length = 168

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 46/67 (68%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           DS+  +  EISK RR+++ +++GK  V IRE+Y K+G + PGKKGISL +DQ+++L   +
Sbjct: 50  DSNGDLYWEISKARRLTISSFRGKTLVSIREYYEKDGHELPGKKGISLPIDQFSSLVRLL 109

Query: 96  EEINKAL 102
             I   L
Sbjct: 110 PHIETTL 116


>gi|154274416|ref|XP_001538059.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414499|gb|EDN09861.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 165

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 44/58 (75%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           IS+ RR++V +++G++ V +RE+Y K+G++ PGKKGIS+ +DQ+NTL   +  +  A+
Sbjct: 68  ISRLRRLTVSSFKGRILVSVREYYEKDGQELPGKKGISMPLDQFNTLIQLIPNVETAI 125


>gi|229366540|gb|ACQ58250.1| Activated RNA polymerase II transcriptional coactivator p15
           [Anoplopoma fimbria]
          Length = 125

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK  +DIRE+++ ++G+  PGKKGISL+ +QWN L+D + EI+ 
Sbjct: 61  MFQIGKMRYVSVRDFKGKCLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQISEIDD 120

Query: 101 AL 102
           A+
Sbjct: 121 AI 122


>gi|410922096|ref|XP_003974519.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Takifugu rubripes]
          Length = 125

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ ++G+  PGKKGISL+ +QWN L+D + +I+ 
Sbjct: 61  MFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWNQLKDQIADIDD 120

Query: 101 AL 102
           A+
Sbjct: 121 AI 122


>gi|66472668|ref|NP_001018376.1| activated RNA polymerase II transcriptional coactivator p15 [Danio
           rerio]
 gi|63100558|gb|AAH95096.1| Zgc:109973 [Danio rerio]
 gi|182891904|gb|AAI65490.1| Zgc:109973 protein [Danio rerio]
          Length = 123

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +QWN L++ + EI+ 
Sbjct: 59  MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWNQLKEQISEIDD 118

Query: 101 AL 102
           A+
Sbjct: 119 AV 120


>gi|241156187|ref|XP_002407712.1| single-stranded DNA binding protein P9, putative [Ixodes
           scapularis]
 gi|215494203|gb|EEC03844.1| single-stranded DNA binding protein P9, putative [Ixodes
           scapularis]
          Length = 114

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 1/59 (1%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++K R ++VR ++G+V VDIREFY    G   PGKKGI L +DQWN L+ H+++I+ A+
Sbjct: 53  LAKKRYLTVREFKGRVMVDIREFYEDNNGDLKPGKKGICLQLDQWNALKGHIDDIDAAI 111


>gi|47211870|emb|CAF89779.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 125

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  +G+  PGKKGISL+ +QWN L+D + +I+ 
Sbjct: 61  MFQIGKMRYVSVRDFKGKVLIDIREYWMNPDGEMKPGKKGISLNPEQWNQLKDQIADIDD 120

Query: 101 AL 102
           A+
Sbjct: 121 AI 122


>gi|225706930|gb|ACO09311.1| Activated RNA polymerase II transcriptional coactivator p15
           [Osmerus mordax]
          Length = 127

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ ++G+  PGKKGISL+ +QW+ L+D + EI+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMNQDGEMKPGKKGISLNPEQWSQLKDQISEIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|307103764|gb|EFN52022.1| hypothetical protein CHLNCDRAFT_54789 [Chlorella variabilis]
          Length = 404

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 46/65 (70%), Gaps = 1/65 (1%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++S +RR  V  ++G ++V+IRE+Y K+G+K PGKKGISL  DQ+ +LR    +++ AL
Sbjct: 274 VDLSSSRRADVSRYKGSLYVNIREYYEKDGQKLPGKKGISLPPDQFASLRQRAADLDAAL 333

Query: 103 -GDNS 106
            G N+
Sbjct: 334 KGHNT 338



 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQW 88
            ++S  R+ S+ N++G+  V+IRE+Y K+G++ PG+KGISL  +QW
Sbjct: 342 VQLSNKRKASISNFKGRFLVNIREYYEKDGQQLPGQKGISLPEEQW 387



 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           +V  +S  R  +VR   G+  VD+REFY K+GK  PG+KG++L    W  L      ++ 
Sbjct: 99  LVVPLSATRFATVRQLGGRAMVDVREFYEKDGKLQPGRKGVALQAAAWTALVQSAAALSA 158

Query: 101 AL 102
           A+
Sbjct: 159 AV 160



 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 23  APPKKASKTDSSDDSDDIVVC-EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
           A  + A+   ++ +  D+  C ++  ++R ++  ++G+  VD+RE Y K+G+  PGKKGI
Sbjct: 148 ALVQSAAALSAAVEGRDLAFCLDLGASKRATISAFKGRHSVDLREHYEKDGQMLPGKKGI 207

Query: 82  SLSVDQWNTLRDHVEEINKAL 102
           SLS ++W  L     +I+  L
Sbjct: 208 SLSEEEWGKLCAAAGQISGKL 228


>gi|308800744|ref|XP_003075153.1| transcriptional coactivator p15 (ISS) [Ostreococcus tauri]
 gi|116061707|emb|CAL52425.1| transcriptional coactivator p15 (ISS), partial [Ostreococcus tauri]
          Length = 358

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 7/85 (8%)

Query: 25  PKKASKTD---SSDDSDDIV--VCEISKNRRVSVRNWQGKVWVDIREFYVK--EGKKFPG 77
           P+ ++KT+   +S  SD +   V  +S  +RV+VR W     VD RE+Y K  EG  FPG
Sbjct: 198 PQTSAKTNELATSPRSDAVENEVVALSATKRVTVRKWNNATLVDFREYYQKGGEGPYFPG 257

Query: 78  KKGISLSVDQWNTLRDHVEEINKAL 102
           KKGISLS+ QW  LR+++++I  A+
Sbjct: 258 KKGISLSLPQWKVLRENIDKIEPAI 282



 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 35/48 (72%)

Query: 39  DIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           +++VCE+SK RR SV  ++G V ++IRE+Y K G+  PG KG +LS D
Sbjct: 291 EVLVCEMSKMRRCSVSKYKGAVLLNIREYYEKNGQILPGFKGTALSKD 338


>gi|387914738|gb|AFK10978.1| RNA polymerase II transcriptional coactivator [Callorhinchus milii]
          Length = 123

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 10/96 (10%)

Query: 8   KEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREF 67
           K  + + S  S  G AP K       SD  D++   +I K R VSVR ++ +V +DIRE+
Sbjct: 34  KSAKRHKSGESSKGAAPAK-------SDKEDNLF--QIGKMRYVSVREFKSRVLIDIREY 84

Query: 68  YV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++ ++G+  PGKKGISLS DQWN L++ + +I+ A+
Sbjct: 85  WMNQDGEMKPGKKGISLSPDQWNQLKEMIPDIDDAI 120


>gi|195147782|ref|XP_002014853.1| GL18728 [Drosophila persimilis]
 gi|198474239|ref|XP_001356612.2| GA21044 [Drosophila pseudoobscura pseudoobscura]
 gi|194106806|gb|EDW28849.1| GL18728 [Drosophila persimilis]
 gi|198138305|gb|EAL33676.2| GA21044 [Drosophila pseudoobscura pseudoobscura]
          Length = 117

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 40/58 (68%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           + + R+V +  ++G+  VDIREFY K G+  PGKKGI LS+ QW  L +H +EI KA+
Sbjct: 58  LERMRQVRINEFRGRKMVDIREFYEKNGETLPGKKGICLSILQWKKLLEHADEITKAV 115


>gi|449269656|gb|EMC80408.1| Activated RNA polymerase II transcriptional coactivator p15
           [Columba livia]
          Length = 126

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 56/76 (73%), Gaps = 4/76 (5%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           +SK  S+ D +   + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 51  SSKQSSNRDEN---MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 107

Query: 87  QWNTLRDHVEEINKAL 102
           QWN L++ + +I+ A+
Sbjct: 108 QWNQLKEQISDIDDAV 123


>gi|56605972|ref|NP_001008479.1| activated RNA polymerase II transcriptional coactivator p15 [Gallus
           gallus]
 gi|326934749|ref|XP_003213447.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Meleagris gallopavo]
 gi|82081991|sp|Q5ZK63.1|TCP4_CHICK RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=SUB1 homolog
 gi|53132176|emb|CAG31880.1| hypothetical protein RCJMB04_12p22 [Gallus gallus]
          Length = 126

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 56/76 (73%), Gaps = 4/76 (5%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           +SK  S+ D +   + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 51  SSKQSSNRDEN---MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 107

Query: 87  QWNTLRDHVEEINKAL 102
           QWN L++ + +I+ A+
Sbjct: 108 QWNQLKEQISDIDDAV 123


>gi|449433026|ref|XP_004134299.1| PREDICTED: uncharacterized protein LOC101205072 [Cucumis sativus]
          Length = 468

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 45/68 (66%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           +D  D+++C +S NR V++  ++G   V +R++Y K+GK+ P  KGIS+  +QW+  + +
Sbjct: 96  NDDGDLLICRLSNNRSVTIHKFKGAPMVSVRQYYEKDGKQLPTLKGISMPTEQWSVFKSN 155

Query: 95  VEEINKAL 102
           +  I +A+
Sbjct: 156 IPAIAEAI 163


>gi|452840343|gb|EME42281.1| hypothetical protein DOTSEDRAFT_154955 [Dothistroma septosporum
           NZE10]
          Length = 179

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 8/106 (7%)

Query: 6   KRKEEEEYDSDGSV-------DGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQG 58
           KR  EEEYDSDG                +A+  +   D D     +IS  RR+ V +++G
Sbjct: 8   KRAAEEEYDSDGGFIEDAPKSKKTKAAAQAANLEVQQDDDGQEYWQISGKRRLVVSDYKG 67

Query: 59  KVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGD 104
              ++IRE+Y K+GK  PG KGISL++DQ+    + + +I  +LGD
Sbjct: 68  STMINIREYYEKDGKTLPG-KGISLNIDQYKVFVELLPQIESSLGD 112


>gi|449478205|ref|XP_004155250.1| PREDICTED: uncharacterized LOC101205072 [Cucumis sativus]
          Length = 468

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 45/68 (66%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           +D  D+++C +S NR V++  ++G   V +R++Y K+GK+ P  KGIS+  +QW+  + +
Sbjct: 96  NDDGDLLICRLSNNRSVTIHKFKGAPMVSVRQYYEKDGKQLPTLKGISMPTEQWSVFKSN 155

Query: 95  VEEINKAL 102
           +  I +A+
Sbjct: 156 IPAIAEAI 163


>gi|50540080|ref|NP_001002505.1| RNA polymerase II transcriptional coactivator [Danio rerio]
 gi|49900783|gb|AAH76294.1| SUB1 homolog (S. cerevisiae) [Danio rerio]
          Length = 124

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 57/79 (72%), Gaps = 5/79 (6%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P  ++KT+ S D+    + +I K R VSVR+++GKV +DIRE+++ + G+  PGKKGISL
Sbjct: 47  PSGSAKTEKSSDN----MFQIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISL 102

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QW+ L++ + +I+ A+
Sbjct: 103 NPEQWSQLKEQMSDIDDAI 121


>gi|322791524|gb|EFZ15915.1| hypothetical protein SINV_08259 [Solenopsis invicta]
          Length = 117

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           ++  NRRV+VRN++GK +VDIRE Y  K+G   PGKKGI L++ QW    D VEE++K 
Sbjct: 54  DLGNNRRVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGICLTMQQWRKFMDVVEEVDKV 112


>gi|260799214|ref|XP_002594592.1| hypothetical protein BRAFLDRAFT_217668 [Branchiostoma floridae]
 gi|229279827|gb|EEN50603.1| hypothetical protein BRAFLDRAFT_217668 [Branchiostoma floridae]
          Length = 65

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 44/61 (72%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           ++S  R VSVR ++GK  +DIRE+Y   G+  PGKKGISL+ DQW  L++ V++I++ + 
Sbjct: 2   QLSNKRYVSVREFKGKCLIDIREYYDAGGELKPGKKGISLTTDQWRRLKEAVDDIDEKIA 61

Query: 104 D 104
           D
Sbjct: 62  D 62


>gi|148230138|ref|NP_001084564.1| SUB1 homolog [Xenopus laevis]
 gi|46250135|gb|AAH68824.1| MGC81442 protein [Xenopus laevis]
          Length = 128

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 54/76 (71%), Gaps = 3/76 (3%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           AS   SS   D++   +I K R V+VR+++GKV +D+RE+++ + G+  PG+KGISL+ +
Sbjct: 52  ASSRQSSGPEDNMF--QIGKMRYVTVRDFKGKVLIDVREYFMDQAGEMKPGRKGISLNPE 109

Query: 87  QWNTLRDHVEEINKAL 102
           QWN L++ + +I+ A+
Sbjct: 110 QWNQLKEQMSDIDDAI 125


>gi|340503881|gb|EGR30390.1| RNA polymerase ii transcriptional coactivator, putative
           [Ichthyophthirius multifiliis]
          Length = 100

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 45/66 (68%)

Query: 37  SDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVE 96
           SD  +  ++   +RVS+R ++GK+++D+REFY K+G   PGKKGI+L++  W  L+  + 
Sbjct: 31  SDGSLYFDLDDKKRVSIRKFKGKLYIDVREFYEKDGDMLPGKKGIALTLSNWEQLKGIIN 90

Query: 97  EINKAL 102
            I+ A+
Sbjct: 91  NIDDAI 96


>gi|126321593|ref|XP_001365728.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Monodelphis domestica]
 gi|395511511|ref|XP_003760002.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Sarcophilus harrisii]
          Length = 126

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 54/77 (70%), Gaps = 1/77 (1%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSV 85
           KA  +     S D  + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ 
Sbjct: 47  KAPASSKQSSSRDDHMFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNP 106

Query: 86  DQWNTLRDHVEEINKAL 102
           +QW+ L++ + +I+ A+
Sbjct: 107 EQWSQLKEQISDIDDAV 123


>gi|66506335|ref|XP_624593.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 1 [Apis mellifera]
          Length = 119

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 16/117 (13%)

Query: 6   KRKEEEEYDSDGSVDGHAPPKKAS--------------KTDSS-DDSDDIVVCEISKNRR 50
           K KE    D D S +G  P KK                K++S+ D+S+   V ++  NR+
Sbjct: 3   KSKEYVSTDDDSSDEGMKPKKKQKREIEDKEEKVSKKLKSESNKDESNKDTVWDLGNNRQ 62

Query: 51  VSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           +SVR+++GK++VDIRE Y  KE    PGKKGI L+V QW  L   +++++KA+   S
Sbjct: 63  ISVRDFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLSVMDDVDKAVKSKS 119


>gi|378732288|gb|EHY58747.1| hypothetical protein HMPREF1120_06750 [Exophiala dermatitidis
           NIH/UT8656]
          Length = 166

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 3/65 (4%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL---RDHVEEINK 100
           EISKNRRV++ +++GK  V+IRE+Y K+ +  PGKKGIS+S++Q++ L      +EE+ K
Sbjct: 56  EISKNRRVTISDFKGKKLVNIREYYQKDNEWLPGKKGISMSLEQYSALIGIMPQIEELLK 115

Query: 101 ALGDN 105
             G++
Sbjct: 116 QQGES 120


>gi|225716216|gb|ACO13954.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
           lucius]
          Length = 129

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 3/79 (3%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P  +SK  +S   D ++  +I + R VSVR ++GK  +DIRE+++ ++G   PGKKGISL
Sbjct: 50  PGGSSKAANSKTEDGML--QIGRMRYVSVREFKGKCLIDIREYWMNQDGDMKPGKKGISL 107

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + +I+ A+
Sbjct: 108 NPEQWNQLKDQISDIDDAI 126


>gi|149586250|ref|XP_001521441.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Ornithorhynchus anatinus]
          Length = 125

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 56/76 (73%), Gaps = 4/76 (5%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           +SK  SS D +   + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 50  SSKQSSSRDDN---MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 106

Query: 87  QWNTLRDHVEEINKAL 102
           QW+ L++ + +I+ A+
Sbjct: 107 QWSQLKEQISDIDDAV 122


>gi|119193170|ref|XP_001247191.1| hypothetical protein CIMG_00962 [Coccidioides immitis RS]
 gi|392863573|gb|EAS35671.2| RNA polymerase II transcriptional coactivator [Coccidioides immitis
           RS]
          Length = 165

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISL 83
           PP    + ++  DS+     EIS+ RRV+V  ++G+  +++RE+Y K+G+  PGKKGIS+
Sbjct: 36  PPTTTQEPNT--DSNGDPYWEISRQRRVTVSTFKGRTMINVREYYEKDGQDLPGKKGISM 93

Query: 84  SVDQWNTL 91
           +++Q+N L
Sbjct: 94  TLEQFNAL 101


>gi|303312299|ref|XP_003066161.1| Transcriptional Coactivator p15 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240105823|gb|EER24016.1| Transcriptional Coactivator p15 family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320040164|gb|EFW22098.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 165

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISL 83
           PP    + ++  DS+     EIS+ RRV+V  ++G+  +++RE+Y K+G+  PGKKGIS+
Sbjct: 36  PPTTTQEPNT--DSNGDPYWEISRQRRVTVSTFKGRTMINVREYYEKDGQDLPGKKGISM 93

Query: 84  SVDQWNTL 91
           +++Q+N L
Sbjct: 94  TLEQFNAL 101


>gi|398396522|ref|XP_003851719.1| hypothetical protein MYCGRDRAFT_43207 [Zymoseptoria tritici IPO323]
 gi|339471599|gb|EGP86695.1| hypothetical protein MYCGRDRAFT_43207 [Zymoseptoria tritici IPO323]
          Length = 161

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKT-----DSSDDSDDIVVCEISKNRRVSVRN 55
           MS K  RK    ++   S   +   KK+ KT     +   D+D     EIS  RR+ V  
Sbjct: 1   MSSKPSRKRVAAFEDPDSDTNNQQTKKSKKTSGFSTEMQTDADGNPFWEISNKRRLGVST 60

Query: 56  WQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++  V V IREFY K+G+  PGKKG++L+ +Q+N + + + +I   L
Sbjct: 61  FKNNVMVSIREFYEKDGQMLPGKKGVTLTTEQFNAVIELLPQIEPVL 107


>gi|195472945|ref|XP_002088758.1| GE18744 [Drosophila yakuba]
 gi|194174859|gb|EDW88470.1| GE18744 [Drosophila yakuba]
          Length = 110

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 23  APPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGIS 82
           A PK A +    D++    +  +   R+V +  ++G+  VDIREFY K G+  PGKKGIS
Sbjct: 32  AAPKSARRDSGGDNATTWTLEGL---RQVRINEFRGRKMVDIREFYEKGGETLPGKKGIS 88

Query: 83  LSVDQWNTLRDHVEEINKAL 102
           LSV QW  L +  EE+ +A+
Sbjct: 89  LSVKQWKKLLEVAEEVTRAV 108


>gi|327282542|ref|XP_003226001.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 1 [Anolis carolinensis]
 gi|327282544|ref|XP_003226002.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 2 [Anolis carolinensis]
          Length = 133

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 57/76 (75%), Gaps = 4/76 (5%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           +SK  S+ D +   + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 58  SSKQSSNKDEN---MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 114

Query: 87  QWNTLRDHVEEINKAL 102
           QW+ L++ + +I++A+
Sbjct: 115 QWSQLKEQITDIDEAV 130


>gi|91088421|ref|XP_967011.1| PREDICTED: similar to p31A, putative [Tribolium castaneum]
 gi|270012200|gb|EFA08648.1| hypothetical protein TcasGA2_TC006312 [Tribolium castaneum]
          Length = 106

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV 60
           M    K K+ +  DSD   +   P KK    + S    D    ++ KNR V +  ++GK 
Sbjct: 1   MPKNKKSKKSDTSDSDSGPEDRGPVKKQKTQNKSSGDSDENSWDLGKNRFVKLTEFKGKW 60

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDN 105
           +V+IREFY  +G+  PGKKGI L+++QW+  ++ + E+  A+  N
Sbjct: 61  YVNIREFYNADGELRPGKKGIMLTMEQWHKFKEVMPELEDAIKRN 105


>gi|52345648|ref|NP_001004871.1| SUB1 homolog [Xenopus (Silurana) tropicalis]
 gi|49670390|gb|AAH75111.1| activated RNA polymerase II transcription cofactor 4 [Xenopus
           (Silurana) tropicalis]
 gi|89273971|emb|CAJ83635.1| activated RNA polymerase II transcription cofactor 4 [Xenopus
           (Silurana) tropicalis]
          Length = 128

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 54/76 (71%), Gaps = 3/76 (3%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           AS   S+   D++   +I K R VSVR+++GKV +D+RE+++ + G+  PG+KGISL+ +
Sbjct: 52  ASSRQSNAPEDNMF--QIGKMRYVSVRDFKGKVLIDVREYFMDQAGEMKPGRKGISLNPE 109

Query: 87  QWNTLRDHVEEINKAL 102
           QWN L++ + +I+ A+
Sbjct: 110 QWNQLKEQMSDIDDAI 125


>gi|299470413|emb|CBN80174.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 258

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 17  GSVDGHAPPKKASKTDSSDDSDDIVVCEI----SKNRRVSVRNWQGKVWVDIREFYVKEG 72
           G+ +G    K   KT   D  D  +VC +    S  ++V+VR W  +  VDIREFY+KE 
Sbjct: 164 GTKEGKKQKKDIRKTGGEDGGDGDLVCVLGETKSARKQVNVRTWNKRTLVDIREFYLKEA 223

Query: 73  KKF-PGKKGISLSVDQWNTLRDHVEEIN 99
           K++ PGKKG+SL+  QW  LR    +I+
Sbjct: 224 KEYRPGKKGMSLNPSQWEILRSAAGQID 251


>gi|221221098|gb|ACM09210.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|221221258|gb|ACM09290.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
 gi|221222030|gb|ACM09676.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
          Length = 132

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 1/79 (1%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P     + ++D   +  + +I + R VSVR ++GK  VDIRE+++ ++G+  PGKKGISL
Sbjct: 51  PGAGGSSKAADSKTEDGMFQIGRMRYVSVREFKGKCLVDIREYWMNQDGEMKPGKKGISL 110

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QW  L+D + EI+ A+
Sbjct: 111 NPEQWTQLKDQMSEIDDAI 129


>gi|322697925|gb|EFY89700.1| Transcriptional Coactivator p15 family protein [Metarhizium acridum
           CQMa 102]
          Length = 148

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V  ++    V++RE+Y K+GK  PGKKGISLSV Q+  L      IN AL
Sbjct: 45  ELSNKRRVGVSQFKNMCLVNVREYYEKDGKMLPGKKGISLSVAQYTALLKAAPGINAAL 103


>gi|384251139|gb|EIE24617.1| PC4-domain-containing protein [Coccomyxa subellipsoidea C-169]
          Length = 342

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 39/52 (75%)

Query: 51  VSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           V+VR+++GK  VDIREFY K+GK  PGKKGISL+ +QW  ++     +++AL
Sbjct: 53  VTVRSFKGKPLVDIREFYEKDGKPMPGKKGISLTPEQWAAVKGSAAAVSEAL 104



 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           +S NRR  + N++G  +V+IRE+Y K G+  PG KGI+LS +Q+  L     ++  AL 
Sbjct: 216 LSSNRRADISNFKGSTFVNIREYYEKNGEMLPGSKGIALSPEQFQILNAAASDVTAALA 274



 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +S  R V +  ++  + VDIRE Y K+GK+ PGKKGISL  +QW +L   +  +  AL
Sbjct: 284 LSSKRAVRINQFKSSIMVDIREMYEKDGKELPGKKGISLVAEQWQSLVKGLPALEAAL 341



 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
           A+ +++ D  ++    ++S  R + VR +   + VDIREFY K+G+  PGKKGISL   Q
Sbjct: 98  AAVSEALDAEEEDFTVDLSAQRNLRVRLFGKNLCVDIREFYEKDGEDAPGKKGISLPAVQ 157

Query: 88  WNTLRDHVEEIN---KALGDNS 106
           W  L    ++I+   +ALG ++
Sbjct: 158 WEALVSATDDIDAELQALGASA 179


>gi|258574395|ref|XP_002541379.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237901645|gb|EEP76046.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 167

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 7/77 (9%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWN 89
           KTDS+ D       EIS+ RRV+V +++G+  +++RE+Y K G+  PGKKGIS++++Q+N
Sbjct: 42  KTDSNGDP----YWEISRQRRVTVSSFKGRTMINVREYYEKGGQDLPGKKGISMTLEQFN 97

Query: 90  ---TLRDHVEEINKALG 103
               L  ++EE+ K  G
Sbjct: 98  ALVALLPNLEEVVKQKG 114


>gi|225715646|gb|ACO13669.1| Activated RNA polymerase II transcriptional coactivator p15 [Esox
           lucius]
          Length = 129

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 3/79 (3%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           P  +SK  +S   D +   +I + R VSVR ++GK  +DIRE+++ ++G   PGKKGISL
Sbjct: 50  PGGSSKAANSKTEDGMF--QIGRMRYVSVREFKGKCLIDIREYWMNQDGDMKPGKKGISL 107

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + +QWN L+D + +I+ A+
Sbjct: 108 NPEQWNQLKDQISDIDDAI 126


>gi|348686058|gb|EGZ25873.1| hypothetical protein PHYSODRAFT_297366 [Phytophthora sojae]
          Length = 268

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           +   +S  RR +VR ++  V +DIREFY ++G   PGKKGISLS++QW  L+   +EI +
Sbjct: 204 IAVPLSNKRRATVRYFRNGVLIDIREFYDQDGVSKPGKKGISLSMEQWTALQKIADEITE 263

Query: 101 A 101
           A
Sbjct: 264 A 264



 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 27/40 (67%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           VV E+S  R V+VR W+   +VDIREFY   G+  PGKKG
Sbjct: 99  VVFELSAKRCVTVRKWKAMKFVDIREFYDDNGQAKPGKKG 138


>gi|380011731|ref|XP_003689951.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Apis florea]
          Length = 119

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRD 93
           D+S+   V ++  NR++SVR+++GK++VDIRE Y  KE    PGKKGI L+V QW  L  
Sbjct: 47  DESNKDTVWDLGNNRQISVRDFKGKLYVDIREMYYDKEANLKPGKKGICLNVTQWKKLLS 106

Query: 94  HVEEINKAL 102
            +++++KA+
Sbjct: 107 VMDDVDKAV 115


>gi|324529837|gb|ADY49049.1| RNA polymerase II transcriptional coactivator [Ascaris suum]
          Length = 128

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 7/102 (6%)

Query: 6   KRKEEEEYDSDGSVDGHAPPKKAS---KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWV 62
           KR ++EE  SD  V    P KKA    K   + D D+++  E+ K R V+VR+++GK  +
Sbjct: 26  KRNKKEESSSDEGVIDKTPVKKAKEGPKLLKNSDGDEML--ELGKMRFVTVRSFKGKALI 83

Query: 63  DIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           DIRE+Y  +  G+  PG+KGISLS +Q+  L+    EI++ L
Sbjct: 84  DIREYYQDKGSGEVKPGRKGISLSREQYENLKRLTAEIDERL 125


>gi|387018208|gb|AFJ51222.1| Activated RNA polymerase II transcriptional coactivator p15-like
           [Crotalus adamanteus]
          Length = 131

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 57/76 (75%), Gaps = 3/76 (3%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           AS   SS+  +++   +I K R V+VR+++GKV +DIRE+++ +EG+  PG+KGISL+ +
Sbjct: 55  ASSVQSSNRDENMF--QIGKMRYVNVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPE 112

Query: 87  QWNTLRDHVEEINKAL 102
           QW+ L++ + +I++A+
Sbjct: 113 QWSQLKEQISDIDEAV 128


>gi|322710064|gb|EFZ01639.1| Transcriptional Coactivator p15 family protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 147

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 1   MSGKGKRKEEEEYDSDGSVDGHAPPK-KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGK 59
           MS   KR+  ++ D D  V   +  K K + T   +D +     E+S  RRV V  ++  
Sbjct: 1   MSPSTKRRAADDSDEDQKVSIKSSKKTKHNVTADGEDDEGNPFWELSNKRRVGVSQFKNV 60

Query: 60  VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +++RE+Y K+GK  PGKKGISLSV Q+  L      IN AL
Sbjct: 61  CLINVREYYEKDGKMLPGKKGISLSVAQYTALLKAAPGINAAL 103


>gi|226372244|gb|ACO51747.1| Activated RNA polymerase II transcriptional coactivator p15 [Rana
           catesbeiana]
 gi|226372470|gb|ACO51860.1| Activated RNA polymerase II transcriptional coactivator p15 [Rana
           catesbeiana]
          Length = 129

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ ++G+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 65  MFQIGKMRYVSVRDFKGKVLIDIREYFMDQQGELKPGRKGISLNPEQWSQLKEQMSDIDN 124

Query: 101 AL 102
           A+
Sbjct: 125 AI 126


>gi|358388648|gb|EHK26241.1| hypothetical protein TRIVIDRAFT_36126 [Trichoderma virens Gv29-8]
          Length = 151

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V  ++   +V+IRE+Y K+GK  PGKKGISLSV+Q+  L      IN AL
Sbjct: 48  ELSNKRRVGVSQFKKMCFVNIREYYEKDGKMLPGKKGISLSVEQYLALIKAAPGINAAL 106


>gi|340517584|gb|EGR47828.1| predicted protein [Trichoderma reesei QM6a]
          Length = 151

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+S  RRV V  ++    V+IRE+Y K+GK  PGKKGISLSV+Q+  L      IN AL
Sbjct: 48  ELSNKRRVGVSQFKKMCLVNIREYYEKDGKMLPGKKGISLSVEQYLALIKAAPGINAAL 106


>gi|159489775|ref|XP_001702870.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270998|gb|EDO96827.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 221

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 38/61 (62%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           V ++S  RRVS+  ++G V+V +REFY K+G+  PG KG+S++  QW  L       N A
Sbjct: 157 VLQLSGKRRVSLSEFKGAVYVGVREFYEKDGQLLPGAKGLSMNAAQWAALVAGAPGFNAA 216

Query: 102 L 102
           L
Sbjct: 217 L 217



 Score = 41.2 bits (95), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 11/66 (16%)

Query: 48  NRRVSVRNWQGKVWVDIREFY-----------VKEGKKFPGKKGISLSVDQWNTLRDHVE 96
            + +S+   QG  ++ +RE+Y            K+G+K PGKKGI+L+   W T+   + 
Sbjct: 84  QKGLSMDPGQGTYYLGLREYYEKDGQLLPGKKGKDGQKLPGKKGIALAPADWATMCAALP 143

Query: 97  EINKAL 102
            I+ AL
Sbjct: 144 AISSAL 149


>gi|426385036|ref|XP_004059044.1| PREDICTED: uncharacterized protein LOC101126279 [Gorilla gorilla
           gorilla]
          Length = 184

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 40  IVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           + + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I
Sbjct: 118 LFLLQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDI 177

Query: 99  NKAL 102
           + A+
Sbjct: 178 DDAV 181


>gi|307166387|gb|EFN60524.1| RNA polymerase II transcriptional coactivator [Camponotus
           floridanus]
          Length = 111

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 7/79 (8%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGIS 82
           P KKA K +         + ++  NR+V+VR+++GK +VDIRE Y  KEG   P KKGI 
Sbjct: 34  PAKKAKKENEE------TIWDLGSNRQVNVRDFKGKYYVDIREMYYDKEGDLKPTKKGIC 87

Query: 83  LSVDQWNTLRDHVEEINKA 101
           LS+ QW    D VEE++K 
Sbjct: 88  LSMQQWRKFMDIVEEVDKV 106


>gi|50262342|gb|AAT72821.1| activated RNA polymerase II transcription cofactor 4 [Homo sapiens]
          Length = 73

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 54/74 (72%), Gaps = 5/74 (6%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQW 88
           K  S DD+    + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW
Sbjct: 1   KLSSRDDN----MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQW 56

Query: 89  NTLRDHVEEINKAL 102
           + L++ + +I+ A+
Sbjct: 57  SQLKEQISDIDDAV 70


>gi|74226891|dbj|BAE27090.1| unnamed protein product [Mus musculus]
          Length = 127

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKK 79
           G  P   AS   SS   DD  + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+K
Sbjct: 43  GETPRALASSKQSSSSRDD-NMFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRK 101

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GISL+++QW+ L++ + +I+ A+
Sbjct: 102 GISLNMEQWSQLKEQISDIDDAV 124


>gi|325192131|emb|CCA26590.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 277

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           D ++  V   +++ RRV+VR ++  V +DIRE+Y ++G   PGKKGISLS DQWN L   
Sbjct: 191 DTTEMTVSFSLAQKRRVTVRIFKAAVLIDIREYYEQDGDWRPGKKGISLSTDQWNKLEHQ 250

Query: 95  V 95
           +
Sbjct: 251 I 251



 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 29/47 (61%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
           +S  R ++VR W+    VDIRE Y   G    GKKGISLS+ QW TL
Sbjct: 111 LSAKRNITVRKWRKATVVDIRELYQVNGVDKYGKKGISLSLQQWQTL 157


>gi|254569646|ref|XP_002491933.1| hypothetical protein [Komagataella pastoris GS115]
 gi|238031730|emb|CAY69653.1| Hypothetical protein PAS_chr2-2_0261 [Komagataella pastoris GS115]
 gi|328351570|emb|CCA37969.1| Putative RNA polymerase II transcriptional coactivator
           [Komagataella pastoris CBS 7435]
          Length = 122

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
            ++ K ++V+VRN++G   VDIREFY   EG+  PGKKGISL+ + W TL D++ +I  A
Sbjct: 17  IDLGKKKQVTVRNFKGVKLVDIREFYTTSEGELRPGKKGISLTEETWKTLVDNIGKIQSA 76

Query: 102 L 102
           L
Sbjct: 77  L 77


>gi|291226478|ref|XP_002733216.1| PREDICTED: RNA polymerase II transcriptional coactivator-like
           [Saccoglossus kowalevskii]
          Length = 116

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 53/72 (73%), Gaps = 3/72 (4%)

Query: 32  DSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNT 90
           +S D SDD++   ++K R V+VR+++GKV +DIRE+Y    G+  PG+KGISL+ +QW+ 
Sbjct: 43  NSDDASDDMIA--LAKMRYVTVRDFKGKVLIDIREYYNDNSGELKPGRKGISLNKEQWDK 100

Query: 91  LRDHVEEINKAL 102
           L++ + EI++ +
Sbjct: 101 LKESIGEIDEKI 112


>gi|307210856|gb|EFN87209.1| hypothetical protein EAI_12899 [Harpegnathos saltator]
          Length = 114

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 38  DDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVE 96
           DD  V ++  NR+V+VRN++G  +VDIRE Y  K+G   PGKKGI LS+ QW      VE
Sbjct: 45  DDDTVWDLGNNRQVNVRNFKGNFYVDIREMYYDKDGDLKPGKKGICLSMSQWRKFMSVVE 104

Query: 97  EINKA 101
           E++K 
Sbjct: 105 EVDKV 109


>gi|346472431|gb|AEO36060.1| hypothetical protein [Amblyomma maculatum]
          Length = 154

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 39/52 (75%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           DD  D+++C +S  RRV++++++G+  V IRE+Y K+GK+ P  KGISL+ +
Sbjct: 103 DDEGDLIICRLSNKRRVTIQDFKGRTLVSIREYYDKDGKQMPSSKGISLTAE 154


>gi|6755364|ref|NP_035424.1| activated RNA polymerase II transcriptional coactivator p15 [Mus
           musculus]
 gi|129392|sp|P11031.3|TCP4_MOUSE RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=Positive cofactor 4;
           Short=PC4; AltName: Full=SUB1 homolog; AltName:
           Full=Single-stranded DNA-binding protein p9; AltName:
           Full=p14
 gi|309120|gb|AAA37317.1| single stranded DNA binding protein p9 precursor [Mus musculus]
 gi|15012118|gb|AAH10967.1| SUB1 homolog (S. cerevisiae) [Mus musculus]
 gi|26339286|dbj|BAC33314.1| unnamed protein product [Mus musculus]
 gi|26339958|dbj|BAC33642.1| unnamed protein product [Mus musculus]
 gi|74152195|dbj|BAE32384.1| unnamed protein product [Mus musculus]
 gi|74198846|dbj|BAE30649.1| unnamed protein product [Mus musculus]
 gi|74204898|dbj|BAE20946.1| unnamed protein product [Mus musculus]
 gi|148671326|gb|EDL03273.1| mCG7211, isoform CRA_a [Mus musculus]
 gi|148671327|gb|EDL03274.1| mCG7211, isoform CRA_a [Mus musculus]
          Length = 127

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|57526804|ref|NP_001009618.1| activated RNA polymerase II transcriptional coactivator p15 [Rattus
           norvegicus]
 gi|84028273|sp|Q63396.3|TCP4_RAT RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=Positive cofactor 4;
           Short=PC4; AltName: Full=SUB1 homolog; AltName: Full=p14
 gi|56789272|gb|AAH88346.1| SUB1 homolog (S. cerevisiae) [Rattus norvegicus]
 gi|149027299|gb|EDL82966.1| rCG23681, isoform CRA_a [Rattus norvegicus]
 gi|149027300|gb|EDL82967.1| rCG23681, isoform CRA_a [Rattus norvegicus]
 gi|149027301|gb|EDL82968.1| rCG23681, isoform CRA_a [Rattus norvegicus]
          Length = 127

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|224064265|ref|XP_002301412.1| predicted protein [Populus trichocarpa]
 gi|222843138|gb|EEE80685.1| predicted protein [Populus trichocarpa]
          Length = 459

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 43/63 (68%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           V+C++S+ R V+++ ++GK +V IR+FY K+G   P K GI L+ +QW  ++ +V  I +
Sbjct: 96  VICKLSERRSVTIQEFKGKSFVSIRDFYQKDGNLLPSKIGICLTSEQWTAIKQNVPAIEE 155

Query: 101 ALG 103
           A+ 
Sbjct: 156 AIA 158


>gi|354483046|ref|XP_003503706.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Cricetulus griseus]
          Length = 127

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|432105540|gb|ELK31737.1| Activated RNA polymerase II transcriptional coactivator p15 [Myotis
           davidii]
          Length = 127

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|194759630|ref|XP_001962050.1| GF15272 [Drosophila ananassae]
 gi|190615747|gb|EDV31271.1| GF15272 [Drosophila ananassae]
          Length = 111

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 22  HAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
           + P   A K D   + +      + K R V++  ++G+  VDIRE Y K+GK  PGKKGI
Sbjct: 32  NTPASSAGKVDGRSEGN---TWTLEKLRLVTINEFRGRKMVDIREHYEKDGKVLPGKKGI 88

Query: 82  SLSVDQWNTLRDHVEEINKAL 102
           SLS+ QW  L +  +EI  A+
Sbjct: 89  SLSIQQWKKLIEQADEITGAI 109


>gi|344272306|ref|XP_003407974.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Loxodonta africana]
 gi|344297766|ref|XP_003420567.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Loxodonta africana]
          Length = 127

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++ +EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDQEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|341881930|gb|EGT37865.1| hypothetical protein CAEBREN_21030 [Caenorhabditis brenneri]
 gi|341881977|gb|EGT37912.1| hypothetical protein CAEBREN_14091 [Caenorhabditis brenneri]
          Length = 123

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 15  SDGSVDGHAPPKKASKTDSS---DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-- 69
           S+ + D    PKKA   + +    DSD   + EI   R  +V N++GK +V+IRE+Y+  
Sbjct: 31  SEATEDHKTEPKKAKNEEVTGRIKDSDGNEMFEIGNMRYATVSNFKGKEYVNIREYYIDK 90

Query: 70  KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
              K  P KKGISL+  QW  L+D + EI+K  
Sbjct: 91  NTSKMMPSKKGISLNKAQWLNLKDLIPEIDKKF 123


>gi|403376683|gb|EJY88322.1| RNA polymerase II transcriptional coactivator KIWI [Oxytricha
           trifallax]
          Length = 393

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 45/68 (66%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           D  +++   E+S  ++V V+ + G+V+VD+REF++K  K  P KKG++L +D W  L+D 
Sbjct: 168 DPDEEVKQFELSVKKKVQVKRYYGEVFVDLREFFIKGEKYLPTKKGVTLKMDHWRALKDL 227

Query: 95  VEEINKAL 102
           +  I++ +
Sbjct: 228 ISTIDRTI 235


>gi|62088150|dbj|BAD92522.1| activated RNA polymerase II transcription cofactor 4 variant [Homo
           sapiens]
          Length = 134

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 70  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 129

Query: 101 AL 102
           A+
Sbjct: 130 AV 131


>gi|355749845|gb|EHH54183.1| SUB1-like protein [Macaca fascicularis]
          Length = 96

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           V  +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+
Sbjct: 31  VAPQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDID 90

Query: 100 KAL 102
            A+
Sbjct: 91  DAV 93


>gi|417407921|gb|JAA50553.1| Putative activated rna polymerase ii transcriptional coactivator
           p15-like protein, partial [Desmodus rotundus]
          Length = 130

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 66  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 125

Query: 101 AL 102
           A+
Sbjct: 126 AV 127


>gi|405978408|gb|EKC42799.1| Activated RNA polymerase II transcriptional coactivator p15
           [Crassostrea gigas]
          Length = 124

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 47/65 (72%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           + ++S  R  +V  ++G+V V IRE+Y   G+  PGKKGISL+++QW +L++ ++EI++A
Sbjct: 60  MFQLSTMRFATVSEFRGRVMVGIREYYDAGGELKPGKKGISLTLEQWTSLKEQMDEIDEA 119

Query: 102 LGDNS 106
           + + S
Sbjct: 120 IKELS 124


>gi|195339124|ref|XP_002036171.1| GM16854 [Drosophila sechellia]
 gi|195577498|ref|XP_002078607.1| GD23514 [Drosophila simulans]
 gi|194130051|gb|EDW52094.1| GM16854 [Drosophila sechellia]
 gi|194190616|gb|EDX04192.1| GD23514 [Drosophila simulans]
          Length = 110

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 28  ASKTDSSDDSDD-IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           A K+D +D  ++      +   R+V +  ++G+  VDIREFY K GK  PGKKGISLS+ 
Sbjct: 33  APKSDPNDSGENGATTWTLEGLRQVRINEFRGRKSVDIREFYDKGGKILPGKKGISLSLI 92

Query: 87  QWNTLRDHVEEINKAL 102
           QW  L +  EE+ +A+
Sbjct: 93  QWKKLLEVAEEVTRAI 108


>gi|148683934|gb|EDL15881.1| mCG49987 [Mus musculus]
          Length = 65

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ 
Sbjct: 1   MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDD 60

Query: 101 AL 102
           A+
Sbjct: 61  AV 62


>gi|242208829|ref|XP_002470264.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730714|gb|EED84567.1| predicted protein [Postia placenta Mad-698-R]
          Length = 163

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 11/78 (14%)

Query: 33  SSDDSDDIVVC-----------EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
           ++DD+D  ++            ++ K RR +VR ++G V++DIRE+Y +EG + PGKKG+
Sbjct: 78  AADDADQQIISVKANDEGDKYIDLGKKRRATVRAFKGTVFLDIREYYGQEGDEKPGKKGV 137

Query: 82  SLSVDQWNTLRDHVEEIN 99
           +L+ +QW  L++  + I+
Sbjct: 138 TLNQEQWEKLKEGQDAID 155


>gi|195433729|ref|XP_002064860.1| GK15158 [Drosophila willistoni]
 gi|194160945|gb|EDW75846.1| GK15158 [Drosophila willistoni]
          Length = 113

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 14  DSD-GSVDGHAPPKKASKTDSSDDS--------DDIVVCEISKNRRVSVRNWQGKVWVDI 64
           DSD G  D + PP K +K  ++  +        D      + K R+V +  ++G+  VDI
Sbjct: 14  DSDSGPEDRNPPPSKKAKEVTTSSAKKDTGGGGDGSTTWTLEKLRQVRINEFRGRKMVDI 73

Query: 65  REFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RE Y K G+  PGKKGISLS+ QW  L +  +EI +A+
Sbjct: 74  REHYEKNGEILPGKKGISLSIQQWKKLLELADEITQAV 111


>gi|313226248|emb|CBY21392.1| unnamed protein product [Oikopleura dioica]
 gi|313241412|emb|CBY33681.1| unnamed protein product [Oikopleura dioica]
          Length = 244

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGK-VWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDH 94
           +++D    E+S  +++ V  ++GK + +D+REFY K+G+K PGKKGI+L  DQ+N +++ 
Sbjct: 176 EAEDYNPLELSDKKQIRVTKFKGKFLLIDVREFYHKDGEKMPGKKGIALKQDQYNKIKEM 235

Query: 95  VEEIN 99
            EEI+
Sbjct: 236 QEEID 240



 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%)

Query: 19  VDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGK 78
           +D  A  K A   + S   D   +  I   R +    ++G+ +++IRE+Y       P K
Sbjct: 89  MDRPAKKKPAGADEPSGGVDLSSMTLIGPKRYMGPMEFKGRHYLNIREYYEDSTGMKPTK 148

Query: 79  KGISLSVDQWNTLRDHVEEINKAL 102
           KG++L+  +W TL+    ++++ +
Sbjct: 149 KGVALNQGEWRTLKSMFYDVDEKI 172


>gi|431917267|gb|ELK16803.1| Activated RNA polymerase II transcriptional coactivator p15
           [Pteropus alecto]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|384944052|gb|AFI35631.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
           mulatta]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|16307067|gb|AAH09610.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|197098442|ref|NP_001126574.1| activated RNA polymerase II transcriptional coactivator p15 [Pongo
           abelii]
 gi|217330646|ref|NP_006704.3| activated RNA polymerase II transcriptional coactivator p15 [Homo
           sapiens]
 gi|386781476|ref|NP_001248140.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
           mulatta]
 gi|114600767|ref|XP_001154506.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 3 [Pan troglodytes]
 gi|114600769|ref|XP_001154561.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 4 [Pan troglodytes]
 gi|114600771|ref|XP_001154682.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 6 [Pan troglodytes]
 gi|114600773|ref|XP_001154622.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 5 [Pan troglodytes]
 gi|149732963|ref|XP_001500513.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Equus caballus]
 gi|296194833|ref|XP_002745128.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 1 [Callithrix jacchus]
 gi|311272155|ref|XP_003133324.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Sus scrofa]
 gi|332821622|ref|XP_003310805.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Pan troglodytes]
 gi|348568984|ref|XP_003470278.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Cavia porcellus]
 gi|390460075|ref|XP_003732415.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 2 [Callithrix jacchus]
 gi|390460077|ref|XP_003732416.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 3 [Callithrix jacchus]
 gi|390460079|ref|XP_003732417.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like isoform 4 [Callithrix jacchus]
 gi|395840243|ref|XP_003792973.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Otolemur garnettii]
 gi|397495433|ref|XP_003818560.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 2 [Pan paniscus]
 gi|397495435|ref|XP_003818561.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 3 [Pan paniscus]
 gi|402871257|ref|XP_003899589.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Papio anubis]
 gi|402871259|ref|XP_003899590.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Papio anubis]
 gi|402871261|ref|XP_003899591.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Papio anubis]
 gi|402871263|ref|XP_003899592.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Papio anubis]
 gi|402871265|ref|XP_003899593.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Papio anubis]
 gi|402912855|ref|XP_003918955.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Papio anubis]
 gi|403290297|ref|XP_003936258.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Saimiri boliviensis boliviensis]
 gi|403290299|ref|XP_003936259.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Saimiri boliviensis boliviensis]
 gi|426246672|ref|XP_004017116.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Ovis aries]
 gi|1709514|sp|P53999.3|TCP4_HUMAN RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=Positive cofactor 4;
           Short=PC4; AltName: Full=SUB1 homolog; AltName: Full=p14
 gi|75041237|sp|Q5R6D0.1|TCP4_PONAB RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=SUB1 homolog
 gi|75077272|sp|Q4R947.1|TCP4_MACFA RecName: Full=Activated RNA polymerase II transcriptional
           coactivator p15; AltName: Full=SUB1 homolog
 gi|531395|gb|AAA20980.1| PC4 [Homo sapiens]
 gi|619161|emb|CAA56200.1| PC4, p15 [Homo sapiens]
 gi|14714777|gb|AAH10537.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
 gi|17390420|gb|AAH18189.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
 gi|18490624|gb|AAH22339.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
 gi|48145921|emb|CAG33183.1| PC4 [Homo sapiens]
 gi|55731955|emb|CAH92686.1| hypothetical protein [Pongo abelii]
 gi|67967783|dbj|BAE00374.1| unnamed protein product [Macaca fascicularis]
 gi|77415321|gb|AAI05973.1| SUB1 homolog (S. cerevisiae) [Homo sapiens]
 gi|90076378|dbj|BAE87869.1| unnamed protein product [Macaca fascicularis]
 gi|90085497|dbj|BAE91489.1| unnamed protein product [Macaca fascicularis]
 gi|119631198|gb|EAX10793.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
 gi|119631199|gb|EAX10794.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
 gi|119631200|gb|EAX10795.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
 gi|119631201|gb|EAX10796.1| SUB1 homolog (S. cerevisiae), isoform CRA_a [Homo sapiens]
 gi|168277570|dbj|BAG10763.1| activated RNA polymerase II transcriptional coactivator p15
           [synthetic construct]
 gi|189053075|dbj|BAG34697.1| unnamed protein product [Homo sapiens]
 gi|383410603|gb|AFH28515.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
           mulatta]
 gi|384944054|gb|AFI35632.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
           mulatta]
 gi|387540984|gb|AFJ71119.1| activated RNA polymerase II transcriptional coactivator p15 [Macaca
           mulatta]
 gi|410209598|gb|JAA02018.1| SUB1 homolog [Pan troglodytes]
 gi|410256770|gb|JAA16352.1| SUB1 homolog [Pan troglodytes]
 gi|410256772|gb|JAA16353.1| SUB1 homolog [Pan troglodytes]
 gi|410296826|gb|JAA27013.1| SUB1 homolog [Pan troglodytes]
 gi|410332337|gb|JAA35115.1| SUB1 homolog [Pan troglodytes]
 gi|444725580|gb|ELW66143.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
           chinensis]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|301769081|ref|XP_002919957.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Ailuropoda melanoleuca]
 gi|345798927|ref|XP_536425.3| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Canis lupus familiaris]
 gi|410949730|ref|XP_003981571.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Felis catus]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|157427940|ref|NP_001098877.1| activated RNA polymerase II transcriptional coactivator p15 [Bos
           taurus]
 gi|157278936|gb|AAI34491.1| SUB1 protein [Bos taurus]
 gi|296475720|tpg|DAA17835.1| TPA: activated RNA polymerase II transcription cofactor 4 [Bos
           taurus]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|332251660|ref|XP_003274964.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 [Nomascus leucogenys]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|242223869|ref|XP_002477490.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722870|gb|EED77311.1| predicted protein [Postia placenta Mad-698-R]
          Length = 163

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 11/78 (14%)

Query: 33  SSDDSDDIVVC-----------EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGI 81
           ++DD+D  ++            ++ K RR +VR ++G V++DIRE+Y +EG + PGKKG+
Sbjct: 78  AADDADQQIISVKVNDEGDKYIDLGKKRRATVRAFKGTVFLDIREYYGQEGDEKPGKKGV 137

Query: 82  SLSVDQWNTLRDHVEEIN 99
           +L+ +QW  L++  + I+
Sbjct: 138 TLNQEQWEKLKEGQDAID 155


>gi|291395203|ref|XP_002714157.1| PREDICTED: activated RNA polymerase II transcription cofactor 4
           [Oryctolagus cuniculus]
          Length = 127

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|302306652|ref|NP_983039.2| ABR093Cp [Ashbya gossypii ATCC 10895]
 gi|299788620|gb|AAS50863.2| ABR093Cp [Ashbya gossypii ATCC 10895]
 gi|374106242|gb|AEY95152.1| FABR093Cp [Ashbya gossypii FDAG1]
          Length = 214

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQ 87
           K  + + ++D V  E+ KN+RV+VR ++    VDIRE+Y +   G+  PGKKGISL+ +Q
Sbjct: 38  KRKTQEAAEDNVFFELGKNKRVTVRQFRNINLVDIREYYQESATGEMKPGKKGISLTEEQ 97

Query: 88  WNTLRDHVEEINKAL 102
           ++ L  H  +I++AL
Sbjct: 98  YDELLQHRGQIDEAL 112


>gi|380799109|gb|AFE71430.1| activated RNA polymerase II transcriptional coactivator p15,
           partial [Macaca mulatta]
 gi|380799111|gb|AFE71431.1| activated RNA polymerase II transcriptional coactivator p15,
           partial [Macaca mulatta]
 gi|380799113|gb|AFE71432.1| activated RNA polymerase II transcriptional coactivator p15,
           partial [Macaca mulatta]
          Length = 124

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 60  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 119

Query: 101 AL 102
           A+
Sbjct: 120 AV 121


>gi|261197087|ref|XP_002624946.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           dermatitidis SLH14081]
 gi|239595576|gb|EEQ78157.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           dermatitidis SLH14081]
          Length = 157

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 4/86 (4%)

Query: 17  GSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP 76
           G+  G + P    K DS+ D        IS+ RR++V +++G+  V +RE+Y K+G++ P
Sbjct: 36  GTTIGTSFPTSEKKIDSNGD----FYWNISRFRRLTVSSFKGRTMVSVREYYEKDGQELP 91

Query: 77  GKKGISLSVDQWNTLRDHVEEINKAL 102
           GKKGIS+ ++Q+N +   +  I   +
Sbjct: 92  GKKGISMPLEQFNAMVQLLPNIEAVI 117


>gi|429852185|gb|ELA27332.1| transcriptional coactivator p15 family protein [Colletotrichum
           gloeosporioides Nara gc5]
          Length = 155

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 3/65 (4%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN---K 100
           ++S  RRV V  +     ++IREFY K+G   PGKKGISLS+ Q+  L   V  IN   +
Sbjct: 49  DLSGKRRVGVSQFNKATLINIREFYEKDGNMLPGKKGISLSIPQYEALLKAVPAINAKLR 108

Query: 101 ALGDN 105
           A+G N
Sbjct: 109 AMGHN 113


>gi|281342399|gb|EFB17983.1| hypothetical protein PANDA_008635 [Ailuropoda melanoleuca]
          Length = 104

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 40  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 99

Query: 101 AL 102
           A+
Sbjct: 100 AV 101


>gi|440903684|gb|ELR54316.1| Activated RNA polymerase II transcriptional coactivator p15,
           partial [Bos grunniens mutus]
          Length = 104

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 40  MFQIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLNPEQWSQLKEQISDIDD 99

Query: 101 AL 102
           A+
Sbjct: 100 AV 101


>gi|452004910|gb|EMD97366.1| hypothetical protein COCHEDRAFT_1220801 [Cochliobolus
           heterostrophus C5]
          Length = 173

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQW 88
           KTD  D+ D  V    S  RRV+V ++     V IRE+YV + G+  PGKKGISLS+DQ+
Sbjct: 53  KTD--DNGDAFVALNSSGKRRVTVSDFNKNTLVSIREYYVTDTGETKPGKKGISLSIDQY 110

Query: 89  NTLRDHVEEINKAL 102
           N L      I  AL
Sbjct: 111 NALLAAAPLIESAL 124


>gi|355731636|gb|AES10440.1| Activated RNA polymerase II transcriptional coactivator p15
           [Mustela putorius furo]
          Length = 144

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct: 82  QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 141


>gi|239606518|gb|EEQ83505.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           dermatitidis ER-3]
 gi|327356300|gb|EGE85157.1| RNA polymerase II transcriptional coactivator [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 157

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 4/75 (5%)

Query: 17  GSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP 76
           G+  G + P    K DS+ D        IS+ RR++V +++G+  V +RE+Y K+G++ P
Sbjct: 36  GTTIGTSFPTSEKKIDSNGD----FYWNISRFRRLTVSSFKGRTMVSVREYYEKDGQELP 91

Query: 77  GKKGISLSVDQWNTL 91
           GKKGIS+ ++Q+N +
Sbjct: 92  GKKGISMPLEQFNAM 106


>gi|114600763|ref|XP_001154452.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 2 [Pan troglodytes]
 gi|397495431|ref|XP_003818559.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15 isoform 1 [Pan paniscus]
          Length = 153

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 89  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 148

Query: 101 AL 102
           A+
Sbjct: 149 AV 150


>gi|145342093|ref|XP_001416129.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576353|gb|ABO94421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 149

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVK--EGKKFPGKKGISLSVDQWNTLR 92
           DD+ +  V  +SK +RV+VR W+    VDIRE+Y    EG   PGKKGISLS  QW  L 
Sbjct: 58  DDAVENEVVALSKTKRVTVRKWKETTLVDIREYYQAGGEGPYKPGKKGISLSSAQWRVLD 117

Query: 93  DHVEEINKAL 102
            +++++  A+
Sbjct: 118 ANIDKVASAI 127


>gi|385304468|gb|EIF48486.1| transcriptional coactivator p15 [Dekkera bruxellensis AWRI1499]
          Length = 151

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 3/82 (3%)

Query: 22  HAPPKKASKTDSSDDSDDIVVCEI-SKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           H  PK   K    DD    +  E+ ++ RRV+VR ++    VDIRE+Y K  +  PG KG
Sbjct: 8   HKEPKSYKK--QQDDGQPKIQFELGAERRRVTVRKFRNMKLVDIREYYQKNEEWLPGTKG 65

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISL+ DQW  L   + EIN+AL
Sbjct: 66  ISLTEDQWGILVSKIGEINEAL 87


>gi|308481187|ref|XP_003102799.1| hypothetical protein CRE_29961 [Caenorhabditis remanei]
 gi|308260885|gb|EFP04838.1| hypothetical protein CRE_29961 [Caenorhabditis remanei]
          Length = 118

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 25  PKKASK---TDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKK 79
           PKKA     T    DSD   + E    R  +V N++GK +V+IRE+YV    GK  P +K
Sbjct: 36  PKKAKAEEVTGRMKDSDGNEMFEFGNLRYATVSNFKGKEYVNIREYYVDKNSGKMMPSRK 95

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GISL+  QW  L+D + EI+K  
Sbjct: 96  GISLNKAQWANLKDLIPEIDKKF 118


>gi|16610191|emb|CAD10638.1| PBF68 protein [Nicotiana tabacum]
          Length = 594

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 9/89 (10%)

Query: 24  PPKKASKTDSSDDSDDIV---------VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKK 74
           PP +  + D S  + ++V         +C++S  R V + +  GK +V IR+FY K+GK 
Sbjct: 100 PPTQHQEADGSLPNGNLVDSNENNCRTICKLSDKRSVGILDIHGKPFVAIRDFYEKDGKL 159

Query: 75  FPGKKGISLSVDQWNTLRDHVEEINKALG 103
            P  +GI+LSV QW++ R     I +A+ 
Sbjct: 160 VPSSRGINLSVQQWSSFRSSFPAIVEAIA 188


>gi|336384292|gb|EGO25440.1| hypothetical protein SERLADRAFT_465594 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 144

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 39/57 (68%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
            ++ K +R +VR ++G V+VD+REF+   G++ PGKKGISL ++QW  L+     I+
Sbjct: 80  IDLGKKKRATVRKFKGAVFVDVREFFGNPGEEKPGKKGISLGLEQWEALKSGASTID 136


>gi|351694577|gb|EHA97495.1| Activated RNA polymerase II transcriptional coactivator p15
           [Heterocephalus glaber]
          Length = 149

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 85  MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 144

Query: 101 AL 102
           A+
Sbjct: 145 AV 146


>gi|2981801|pdb|1PCF|A Chain A, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981802|pdb|1PCF|B Chain B, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981803|pdb|1PCF|C Chain C, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981804|pdb|1PCF|D Chain D, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981805|pdb|1PCF|E Chain E, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981806|pdb|1PCF|F Chain F, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981807|pdb|1PCF|G Chain G, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|2981808|pdb|1PCF|H Chain H, Human Transcriptional Coactivator Pc4 C-Terminal Domain
 gi|88192567|pdb|2C62|A Chain A, Crystal Structure Of The Human Transcription Cofactor Pc4
           In Complex With Single-Stranded Dna
 gi|88192568|pdb|2C62|B Chain B, Crystal Structure Of The Human Transcription Cofactor Pc4
           In Complex With Single-Stranded Dna
 gi|146387160|pdb|2PHE|A Chain A, Model For Vp16 Binding To Pc4
 gi|146387161|pdb|2PHE|B Chain B, Model For Vp16 Binding To Pc4
          Length = 66

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 2   MFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 61

Query: 101 AL 102
           A+
Sbjct: 62  AV 63


>gi|150865191|ref|XP_001384308.2| hypothetical protein PICST_31143 [Scheffersomyces stipitis CBS
           6054]
 gi|149386447|gb|ABN66279.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 141

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 2/66 (3%)

Query: 39  DIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVE 96
           D VV E+ K ++V++R +     VDIREFY+ +  G+K PGKKGISL+ D W  L D   
Sbjct: 22  DEVVIELDKKKQVTIRKFNNINLVDIREFYIDKDSGEKKPGKKGISLTEDTWYKLLDSTN 81

Query: 97  EINKAL 102
           +I  AL
Sbjct: 82  KIQSAL 87


>gi|195386510|ref|XP_002051947.1| GJ24334 [Drosophila virilis]
 gi|194148404|gb|EDW64102.1| GJ24334 [Drosophila virilis]
          Length = 111

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 24  PPKKASKTDSSDDS--DD----IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPG 77
           P KKA +T +++ S  DD    +    +   R+V +  ++GK  VDIRE Y K+GK  PG
Sbjct: 25  PSKKAKETGTAEKSKKDDGDGGVSTWTLEGMRQVRINEFRGKKMVDIREHYEKDGKVLPG 84

Query: 78  KKGISLSVDQWNTLRDHVEEINKAL 102
           KKGISLS  QW  L    +++++AL
Sbjct: 85  KKGISLSATQWKKLLAVADDVSRAL 109


>gi|400596300|gb|EJP64076.1| transcriptional Coactivator p15 [Beauveria bassiana ARSEF 2860]
          Length = 159

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +S  RRV V  +     ++IRE+Y K+GK  P KKGISLSV+Q+ TL   +  IN+ L
Sbjct: 57  LSSKRRVGVSKFNNATMINIREYYEKDGKLLPAKKGISLSVEQYTTLIKVMPSINEQL 114


>gi|451853477|gb|EMD66771.1| hypothetical protein COCSADRAFT_35260 [Cochliobolus sativus ND90Pr]
          Length = 171

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQW 88
           KTD  D+ D  V    S  RR +V ++    +V IRE+YV + G+  PGKKGISLS+DQ+
Sbjct: 53  KTD--DNGDAFVALNSSGKRRATVSDFNKNTFVSIREYYVTDTGETKPGKKGISLSIDQY 110

Query: 89  NTLRDHVEEINKALG 103
           N L      I  AL 
Sbjct: 111 NALLAAAPLIESALA 125


>gi|195114344|ref|XP_002001727.1| GI17008 [Drosophila mojavensis]
 gi|193912302|gb|EDW11169.1| GI17008 [Drosophila mojavensis]
          Length = 113

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           K++K DS D S+      +   R+V +  ++G+  VDIRE Y K+GK  PGKKGISL++ 
Sbjct: 37  KSNKNDSGDGSE-TTTWTLEGMRQVRINEFRGRKMVDIREHYEKDGKVLPGKKGISLTLS 95

Query: 87  QWNTLRDHVEEINKAL 102
           QW  L    +++ +AL
Sbjct: 96  QWKKLLAVADDVTRAL 111


>gi|221132768|ref|XP_002165392.1| PREDICTED: RNA polymerase II transcriptional coactivator SUB1-like
           [Hydra magnipapillata]
          Length = 115

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +SK RRV+V  ++GK  + IRE+Y     G++ PGKKGISL+++QW  L   VE +N+AL
Sbjct: 55  LSKQRRVTVDEFRGKKLISIREYYTDKNSGEEKPGKKGISLTLEQWQELVKVVEAVNEAL 114


>gi|156043231|ref|XP_001588172.1| predicted protein [Sclerotinia sclerotiorum 1980]
 gi|154695006|gb|EDN94744.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 200

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 37/54 (68%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R++ + +++G+  ++IREFY K+G   PGKKGISL++DQ+      + +IN  L
Sbjct: 65  RKIELSDFKGQTLINIREFYEKDGNLLPGKKGISLTIDQYKNFLQSIPQINANL 118


>gi|349605909|gb|AEQ00989.1| Activated RNA polymerase II transcriptional coactivator p15-like
           protein, partial [Equus caballus]
          Length = 63

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +I K R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct: 1   QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 60


>gi|340923611|gb|EGS18514.1| RNA polymerase II transcriptional coactivator-like protein
           [Chaetomium thermophilum var. thermophilum DSM 1495]
          Length = 157

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDH 94
           DS+     EI  NRRV V  ++G   ++IRE++   +G+  PGKKGISL++DQ+  L   
Sbjct: 37  DSEGNTYWEIGHNRRVGVSKFKGTTLINIREYFTAPDGEMRPGKKGISLTLDQYKALLGA 96

Query: 95  VEEINKAL 102
           + E+N  L
Sbjct: 97  IPELNDEL 104


>gi|336275131|ref|XP_003352319.1| hypothetical protein SMAC_02752 [Sordaria macrospora k-hell]
          Length = 164

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           G A P++ +K     D D     E+  NRR+S   ++    ++IRE+Y  +GK  PGKKG
Sbjct: 27  GKAQPQELTK---GSDQDGNTFWELGSNRRISSSVFRNTTLINIREYYNADGKLMPGKKG 83

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISLS+ Q+  L   + ++N  L
Sbjct: 84  ISLSLAQYQALLKVIPQLNADL 105


>gi|225678856|gb|EEH17140.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 161

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 39/47 (82%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
           ++++RR++V +++G+  + +RE+Y K+G++ PGKKGISL ++Q+N L
Sbjct: 55  LARSRRLTVSSFKGRTMISVREYYEKDGQELPGKKGISLPLEQFNAL 101


>gi|295660162|ref|XP_002790638.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
          Pb01]
 gi|226281513|gb|EEH37079.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
          Pb01]
          Length = 158

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 38/47 (80%)

Query: 45 ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
          ++++RR++V +++G   V +RE+Y K+G++ PGKKGISL ++Q+N L
Sbjct: 52 LARSRRLTVSSYKGHTMVSVREYYEKDGQELPGKKGISLPLEQFNAL 98


>gi|226293691|gb|EEH49111.1| predicted protein [Paracoccidioides brasiliensis Pb18]
          Length = 223

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 42/56 (75%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
           DS+      ++++RR++V +++G+  + +RE+Y K+G++ PGKKGISL ++Q+N L
Sbjct: 108 DSNGDFYWSLARSRRLTVSSFKGRTMISVREYYEKDGQELPGKKGISLPLEQFNAL 163


>gi|330928469|ref|XP_003302278.1| hypothetical protein PTT_14027 [Pyrenophora teres f. teres 0-1]
 gi|311322506|gb|EFQ89660.1| hypothetical protein PTT_14027 [Pyrenophora teres f. teres 0-1]
          Length = 174

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 34  SDDSDDI-VVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTL 91
           +DD+ DI V    S  RR++V ++   + V IRE+Y  + G+  PGKKGISL++DQ+NTL
Sbjct: 55  TDDNGDIYVALNTSGKRRLTVSDFNKSILVSIREYYTTDSGEMRPGKKGISLTIDQYNTL 114

Query: 92  RDHVEEINKAL 102
                 I   L
Sbjct: 115 LAAAPLIEATL 125


>gi|449016693|dbj|BAM80095.1| similar to RNA polymerase II transcriptional coactivator
           [Cyanidioschyzon merolae strain 10D]
          Length = 103

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 2/56 (3%)

Query: 49  RRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RRV VR ++G+V VDIRE+Y   K G++ PG+KGISL++ Q+ +L+  + +I  AL
Sbjct: 41  RRVMVRKYRGQVLVDIREYYRDAKTGEELPGRKGISLTMKQFRSLQTLLPDIEVAL 96


>gi|17137156|ref|NP_477136.1| single stranded-binding protein c31A [Drosophila melanogaster]
 gi|37090031|sp|Q9VLR5.1|TCP4_DROME RecName: Full=RNA polymerase II transcriptional coactivator;
           AltName: Full=p11
 gi|7297359|gb|AAF52619.1| single stranded-binding protein c31A [Drosophila melanogaster]
 gi|66772731|gb|AAY55677.1| IP02710p [Drosophila melanogaster]
 gi|220951244|gb|ACL88165.1| Ssb-c31a-PA [synthetic construct]
 gi|220959914|gb|ACL92500.1| Ssb-c31a-PA [synthetic construct]
          Length = 110

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 38/54 (70%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R+V +  ++G+  VDIREFY K G+  PGKKGISLS+ QW  L +  EE+ +A+
Sbjct: 55  RQVRINEFRGRKSVDIREFYDKGGQILPGKKGISLSLIQWKKLLEVAEEVTRAI 108


>gi|268537306|ref|XP_002633789.1| Hypothetical protein CBG03481 [Caenorhabditis briggsae]
          Length = 116

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)

Query: 26  KKASKTDSS---DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKF-PGKKG 80
           KKA K +++    DSD   + EI   R  +V  ++GK +V+IRE+Y+ KE +K  P +KG
Sbjct: 35  KKAKKEEATGRLKDSDGNEMFEIGNLRYATVSKFKGKEYVNIREYYIDKETQKMQPSRKG 94

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISLS  QW  L+D + EI+K L
Sbjct: 95  ISLSKAQWANLKDLIPEIDKKL 116


>gi|344300326|gb|EGW30647.1| hypothetical protein SPAPADRAFT_142754 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 140

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
            V E+ K ++V++R +     VDIREFY+ K+G++ PGKKGISL+ D W  L ++  +I 
Sbjct: 23  TVIELDKKKQVTIRKFNNINLVDIREFYIDKDGERKPGKKGISLTEDTWYKLLENTNKIQ 82

Query: 100 KAL 102
            AL
Sbjct: 83  NAL 85


>gi|19114954|ref|NP_594042.1| transcription coactivator PC4 [Schizosaccharomyces pombe 972h-]
 gi|37088093|sp|P87294.1|TCP4_SCHPO RecName: Full=Putative RNA polymerase II transcriptional
           coactivator
 gi|2222784|emb|CAB10003.1| transcription coactivator PC4 [Schizosaccharomyces pombe]
          Length = 136

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 49/83 (59%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           G     K  KT+   D +       ++ +R+++  ++G  +V IRE+Y K+G   PGKKG
Sbjct: 10  GDKASSKKPKTEKQSDHELHWALNETEKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKG 69

Query: 81  ISLSVDQWNTLRDHVEEINKALG 103
           I+L++++W  L+  + E++ +LG
Sbjct: 70  IALNINEWKKLKQLIHEVDDSLG 92


>gi|73963571|ref|XP_853832.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Canis lupus familiaris]
          Length = 127

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R +SV++++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ 
Sbjct: 63  MFQIGKMRYISVQDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDD 122

Query: 101 AL 102
           A+
Sbjct: 123 AV 124


>gi|154316442|ref|XP_001557542.1| predicted protein [Botryotinia fuckeliana B05.10]
 gi|347835246|emb|CCD49818.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 191

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 37/54 (68%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R++ + +++G+  ++IREFY K+G   PGKKGISL+VDQ+      + +IN  L
Sbjct: 67  RKIELSDFKGQTLINIREFYEKDGNVLPGKKGISLTVDQYKNFLRSIPQINANL 120


>gi|380092398|emb|CCC10175.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 217

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           G A P++ +K     D D     E+  NRR+S   ++    ++IRE+Y  +GK  PGKKG
Sbjct: 27  GKAQPQELTK---GSDQDGNTFWELGSNRRISSSVFRNTTLINIREYYNADGKLMPGKKG 83

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISLS+ Q+  L   + ++N  L
Sbjct: 84  ISLSLAQYQALLKVIPQLNADL 105


>gi|413951046|gb|AFW83695.1| hypothetical protein ZEAMMB73_831324 [Zea mays]
          Length = 209

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 26/94 (27%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG-------------- 80
           DD  D+++C +S  RRV++  ++G+  V IREFYVK+GK+ P  KG              
Sbjct: 109 DDQGDLILCRLSSKRRVTLSEFKGRSLVSIREFYVKDGKEMPSAKGYASPVFSCIFRSLF 168

Query: 81  ------------ISLSVDQWNTLRDHVEEINKAL 102
                       IS++++QW    + V  I  A+
Sbjct: 169 SAVIVLPLVSSCISMTLEQWEAFCNAVPAIEDAI 202


>gi|205854|gb|AAA41758.1| pR-ET2 encoded oncodevelopmental protein (putative); putative,
           partial [Rattus norvegicus]
          Length = 119

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I K R VSVR+++GK+ +DIRE+++  EG+  P +KGISL+++QW+ L++ + +I+ 
Sbjct: 55  MFQIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPRRKGISLNMEQWSQLKEQISDIDD 114

Query: 101 AL 102
           A+
Sbjct: 115 AV 116


>gi|354491665|ref|XP_003507975.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Cricetulus griseus]
 gi|344240962|gb|EGV97065.1| Activated RNA polymerase II transcriptional coactivator p15
           [Cricetulus griseus]
          Length = 124

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 57/83 (68%), Gaps = 5/83 (6%)

Query: 25  PKKASKTDSSDD----SDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKK 79
           P + S+T +S +    S D  + +I K R +SVR+++G + +DIRE+++  EG+   G+K
Sbjct: 39  PGETSRTLASSEQRSSSRDGNIFQIGKMRYISVRDFKGLILIDIREYWMDSEGEMKLGRK 98

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GISL+V+QW+ L++ + +I+ A+
Sbjct: 99  GISLNVEQWSQLKEQISDIDDAV 121


>gi|116179834|ref|XP_001219766.1| predicted protein [Chaetomium globosum CBS 148.51]
 gi|88184842|gb|EAQ92310.1| predicted protein [Chaetomium globosum CBS 148.51]
          Length = 156

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           EI  NRR+    ++G   V+IREFY    G+  P KKGISL++DQ+N L   + E+N+ L
Sbjct: 46  EIGNNRRIGPTRYKGVTLVNIREFYTTPTGELKPAKKGISLTLDQYNALLKVIPELNEKL 105


>gi|389641159|ref|XP_003718212.1| hypothetical protein MGG_00780 [Magnaporthe oryzae 70-15]
 gi|351640765|gb|EHA48628.1| hypothetical protein MGG_00780 [Magnaporthe oryzae 70-15]
 gi|440479446|gb|ELQ60214.1| hypothetical protein OOW_P131scaffold01307g15 [Magnaporthe oryzae
           P131]
          Length = 162

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 6   KRKEEEEYDSDGSVDGHAP-PKKASKTDSSD------DSDDIVVCEISKNRRVSVRNWQG 58
           KR  +EE  S GS     P P K +K+ +S+      D++     EIS  RRV +  ++ 
Sbjct: 9   KRARDEEAQSGGSEAETKPAPVKKAKSKASNPGGSQVDAEGNPFWEISDKRRVGISQFKK 68

Query: 59  KVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +++IRE+Y   G+  PGKKGI L+VDQ+      +  IN  L
Sbjct: 69  MDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLKAIPAINAEL 112


>gi|145513068|ref|XP_001442445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409798|emb|CAK75048.1| unnamed protein product [Paramecium tetraurelia]
          Length = 115

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 45/67 (67%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           ++D ++  +++  ++VSV  ++G V + IREF+ K+G+  P KKGI+L +D W   + ++
Sbjct: 44  NTDFLLNFKLTSFKKVSVSKFKGNVIISIREFFSKDGQSLPTKKGITLQLDNWEKFKQYI 103

Query: 96  EEINKAL 102
            EI++ +
Sbjct: 104 AEIDECV 110


>gi|402550178|pdb|4AGH|A Chain A, Structural Features Of Ssdna Binding Protein Mosub1 From
           Magnaporthe Oryzae
          Length = 158

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)

Query: 6   KRKEEEEYDSDGSVDGHAP-PKKASKTDSSD------DSDDIVVCEISKNRRVSVRNWQG 58
           KR  +EE  S GS     P P K +K+ +S+      D++     EIS  RRV +  ++ 
Sbjct: 5   KRARDEEAQSGGSEAETKPAPVKKAKSKASNPGGSQVDAEGNPFWEISDKRRVGISQFKK 64

Query: 59  KVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +++IRE+Y   G+  PGKKGI L+VDQ+      +  IN  L
Sbjct: 65  MDFINIREYYEAGGEMKPGKKGIGLTVDQYTAFLKAIPAINAEL 108


>gi|392577681|gb|EIW70810.1| hypothetical protein TREMEDRAFT_61316 [Tremella mesenterica DSM
           1558]
          Length = 151

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEG--KKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +S  RRVS+  +Q K  +DIRE+Y  +G  +  PGKKGISL+ +QW + + ++  I+K L
Sbjct: 88  LSDYRRVSISKFQDKTLIDIREYYKDKGSGEMKPGKKGISLTCEQWESFKGNISSIDKML 147

Query: 103 GDNS 106
            D +
Sbjct: 148 SDQT 151


>gi|85090159|ref|XP_958285.1| hypothetical protein NCU04584 [Neurospora crassa OR74A]
 gi|37088308|sp|Q872F4.1|TCP4_NEUCR RecName: Full=Putative RNA polymerase II transcriptional
           coactivator
 gi|28919630|gb|EAA29049.1| predicted protein [Neurospora crassa OR74A]
 gi|28950023|emb|CAD70778.1| conserved hypothetical protein [Neurospora crassa]
          Length = 172

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           G A P++ +K     D D     E+  NRR+S   ++    V+IRE+Y   GK  PGKKG
Sbjct: 27  GKAQPQELTK---GSDQDGNTFWELGNNRRISSSVFRNTTLVNIREYYDAGGKLMPGKKG 83

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISLS+ Q+  L   + ++N  L
Sbjct: 84  ISLSLAQYQNLLKVIPQLNADL 105


>gi|195035187|ref|XP_001989059.1| GH11512 [Drosophila grimshawi]
 gi|193905059|gb|EDW03926.1| GH11512 [Drosophila grimshawi]
          Length = 119

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 27  KASKTDSS----DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGIS 82
           KA+K +S+    D  D      +   R+V +  ++G+  VDIRE Y K+GK  PGKKGIS
Sbjct: 38  KANKNESAVKRGDGGDGTSSWTLEGMRQVRINEFRGRKMVDIREHYEKDGKVLPGKKGIS 97

Query: 83  LSVDQWNTLRDHVEEINKAL 102
           LS  QW  L    +++ +AL
Sbjct: 98  LSASQWRKLLACADDVTRAL 117


>gi|412985480|emb|CCO18926.1| predicted protein [Bathycoccus prasinos]
          Length = 392

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 33  SSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTL 91
           ++ +S+   VCEI  N+RV+V  +QGK  V +RE+Y  K G+  PG KG++ + +QW   
Sbjct: 319 AAGNSESEAVCEIGGNKRVTVSKYQGKPMVHVREYYQNKNGEWAPGFKGLAFNREQWEMF 378

Query: 92  RDHVEEIN 99
            +H +EI+
Sbjct: 379 VNHADEIS 386



 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 45/65 (69%)

Query: 34  SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRD 93
           ++D+ D  VC +S  +RV+V+ ++G   +  RE+Y K+G+  PGKKG++L+ +Q+  LR+
Sbjct: 247 AEDAVDGEVCRLSNAKRVAVQVYRGAPTISFREYYQKDGQWLPGKKGVNLNAEQFENLRE 306

Query: 94  HVEEI 98
            + ++
Sbjct: 307 KIADV 311


>gi|353235574|emb|CCA67585.1| hypothetical protein PIIN_01413 [Piriformospora indica DSM 11827]
          Length = 143

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 36/46 (78%), Gaps = 2/46 (4%)

Query: 48  NRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTL 91
            RRV++R ++GK +VDIREFYV  +  +  PGKKGISL+V++W+ L
Sbjct: 81  TRRVTIREFKGKTYVDIREFYVDKQTSESKPGKKGISLTVEEWHDL 126


>gi|336473206|gb|EGO61366.1| hypothetical protein NEUTE1DRAFT_77322 [Neurospora tetrasperma FGSC
           2508]
 gi|350293526|gb|EGZ74611.1| PC4-domain-containing protein [Neurospora tetrasperma FGSC 2509]
          Length = 172

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 21  GHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           G A P++ +K     D D     E+  NRR+S   ++    V+IRE+Y   GK  PGKKG
Sbjct: 27  GKAQPQELTK---GSDQDGNTFWELGNNRRISSSVFRNTTLVNIREYYDAGGKLMPGKKG 83

Query: 81  ISLSVDQWNTLRDHVEEINKAL 102
           ISLS+ Q+  L   + ++N  L
Sbjct: 84  ISLSLAQYQNLLKVIPQLNADL 105


>gi|390602418|gb|EIN11811.1| transcription cofactor Pc4, partial [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 69

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 2/62 (3%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
            ++ K +R +V  +   V++++RE+Y+    G+  PGKKGI+L+++QW TL++H +EI++
Sbjct: 8   VDLGKLKRATVSAFGKGVYLNLREYYLDKSTGEAKPGKKGITLTLEQWETLKEHADEIDR 67

Query: 101 AL 102
           A 
Sbjct: 68  AF 69


>gi|402890988|ref|XP_003908747.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Papio anubis]
          Length = 160

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +  K R VSVR+++GKV +DIRE+++  EG+  PG+KGI L+ +QW+ L++ + +I+ 
Sbjct: 90  MFQTGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGIYLNPEQWSQLKEQISDIDD 149

Query: 101 AL 102
           A+
Sbjct: 150 AV 151


>gi|344244825|gb|EGW00929.1| Activated RNA polymerase II transcriptional coactivator p15
           [Cricetulus griseus]
          Length = 59

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 45/55 (81%), Gaps = 1/55 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R VSVR+++GK+ +DIRE+++  EG+  PG+KGISL+++QW+ L++ + +I+ A+
Sbjct: 2   RYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 56


>gi|410074447|ref|XP_003954806.1| hypothetical protein KAFR_0A02330 [Kazachstania africana CBS 2517]
 gi|372461388|emb|CCF55671.1| hypothetical protein KAFR_0A02330 [Kazachstania africana CBS 2517]
          Length = 218

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 44/64 (68%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEI 98
           V+ ++ KN+RV+VR ++    +DIRE+Y+ +  G+  PGKKGISL+ D ++ L  H   I
Sbjct: 35  VIFDLGKNKRVTVRQFRNINLIDIREYYMDQSTGEMKPGKKGISLTEDLYDELLKHRLNI 94

Query: 99  NKAL 102
           ++AL
Sbjct: 95  DEAL 98


>gi|189191896|ref|XP_001932287.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973893|gb|EDU41392.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 175

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQW 88
           K ++ D+ D  V    S  RR++V ++     V IRE+Y  + G+  PGKKGISL++DQ+
Sbjct: 52  KLETDDNGDVYVALNTSGKRRLTVSDFNKNTLVSIREYYSTDSGEMRPGKKGISLTIDQY 111

Query: 89  NTLRDHVEEINKAL 102
           NTL      I   L
Sbjct: 112 NTLLAAAPLIEATL 125


>gi|134106209|ref|XP_778115.1| hypothetical protein CNBA1170 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260818|gb|EAL23468.1| hypothetical protein CNBA1170 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 114

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +S+ RR++VR ++GK  VDIRE Y     G   PG KGISL+ +QW  LR++++ +++ +
Sbjct: 50  LSEYRRLTVRTFKGKTLVDIREMYKDKSSGALKPGSKGISLTAEQWEILRNNIQNVDEMV 109


>gi|198433464|ref|XP_002128161.1| PREDICTED: similar to general transcriptional coactivator [Ciona
           intestinalis]
          Length = 123

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 39/55 (70%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           + K + + VR ++ K+ +DIRE Y K+G+  PGKKGISLS +QW  L+  +EE++
Sbjct: 62  LGKMKFIDVRTFKDKILIDIREHYQKDGEIKPGKKGISLSTEQWEKLKMSMEEVD 116


>gi|50312479|ref|XP_456275.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645411|emb|CAG98983.1| KLLA0F26873p [Kluyveromyces lactis]
          Length = 244

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           E+ KN+RV++R ++    +DIRE+Y+ +  G   PGKKGISL+ +Q++ L  H  EI   
Sbjct: 18  ELGKNKRVTIRRFKNINLIDIREYYLDQSSGDMRPGKKGISLTEEQYDQLIRHRSEIENC 77

Query: 102 LGD 104
           L D
Sbjct: 78  LID 80


>gi|310793568|gb|EFQ29029.1| transcriptional Coactivator p15 [Glomerella graminicola M1.001]
          Length = 157

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 38/59 (64%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++S  RRV V  ++   +++IREFY K+G   PGKKGISL++ Q+  L   +  I++ L
Sbjct: 52  DLSNKRRVGVSQFKNNTFINIREFYEKDGDMLPGKKGISLNIAQYEALVKAIPAISEKL 110


>gi|169599549|ref|XP_001793197.1| hypothetical protein SNOG_02595 [Phaeosphaeria nodorum SN15]
 gi|111068206|gb|EAT89326.1| hypothetical protein SNOG_02595 [Phaeosphaeria nodorum SN15]
          Length = 180

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 33  SSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTL 91
           ++DD +  V       RR+++R ++  + +D+RE++  + G+  PGKKGISL++DQ+NTL
Sbjct: 60  TNDDGEKFVGLSAGGKRRITIREFKNTLLLDVREYWTNDAGELKPGKKGISLNLDQYNTL 119

Query: 92  RDHVEEINKALGD 104
              +  I  AL +
Sbjct: 120 VAALPLIEVALAE 132


>gi|397632276|gb|EJK70483.1| hypothetical protein THAOC_08153, partial [Thalassiosira
          oceanica]
          Length = 107

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 44 EISKNRRVSVRNWQ---GKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTL 91
          E+S  +R ++R ++     V VDIRE Y K+GK  PGKKGISL+V Q+  L
Sbjct: 44 ELSSKKRCTIRKYRKYRNSVLVDIREMYEKDGKTLPGKKGISLTVAQYQAL 94


>gi|444321999|ref|XP_004181655.1| hypothetical protein TBLA_0G01940 [Tetrapisispora blattae CBS 6284]
 gi|387514700|emb|CCH62136.1| hypothetical protein TBLA_0G01940 [Tetrapisispora blattae CBS 6284]
          Length = 312

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 49  AIFDLGKNKRVTVRQFRNMNLIDIREYYMDSSTGEMRPGKKGISLTEDLYDELLKHRLNI 108

Query: 99  NKAL 102
           ++AL
Sbjct: 109 DEAL 112


>gi|406699363|gb|EKD02568.1| hypothetical protein A1Q2_03164 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 418

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 23/104 (22%)

Query: 24  PPKKASKTDSSDD--------SDDIV-------------VCEISKNRRVSVRNWQGKVWV 62
           PP+ A  T S+DD        S+D+                 +SK RRV+VR+++GK +V
Sbjct: 310 PPRSAEDTASNDDKKLRTSASSEDVPDPTKVQENAEGDEYVSLSKTRRVTVRDFKGKTYV 369

Query: 63  DIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGD 104
           D+R+ YV    G+  P  KGI L+++QW+ L+  +  ++  L D
Sbjct: 370 DLRDHYVDKNSGEMKPTGKGIMLTLEQWDALKAAMGAVDGMLHD 413


>gi|312074004|ref|XP_003139775.1| hypothetical protein LOAG_04190 [Loa loa]
 gi|307765059|gb|EFO24293.1| hypothetical protein LOAG_04190 [Loa loa]
          Length = 121

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 11  EEYDSDGSVDGHAPPKKASKTDSS-DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV 69
           E   SD S+    P KK    D    ++D   + E+ K R V+VR+++GK  +DIRE+Y 
Sbjct: 24  ENSTSDESIIDKTPVKKGKSNDGGFKNADGEEMFELGKMRFVTVRSFKGKALIDIREYYQ 83

Query: 70  KE--GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            +  G+  PG+KGISLS +Q+  L+  + +I++ L
Sbjct: 84  DKGSGELKPGRKGISLSGEQYQRLKAIMGDIDEKL 118


>gi|403414457|emb|CCM01157.1| predicted protein [Fibroporia radiculosa]
          Length = 166

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 16/88 (18%)

Query: 24  PPK-KASKTDSSDDSDDIVV-----------CEISKNRRVSVRNWQGKVWVDIREFYVKE 71
           PP+ K +  +S +++D I +            ++ K RR +VR+    V++DIRE+Y  E
Sbjct: 75  PPQAKETLAESEEEADGITLNVKNNDEGDKYLDLGKKRRATVRS----VFLDIREYYGPE 130

Query: 72  GKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           G + PGKKG++LS +QWN L+   E I+
Sbjct: 131 GDEKPGKKGVTLSQEQWNKLKQSSEVID 158


>gi|328769088|gb|EGF79133.1| hypothetical protein BATDEDRAFT_26386 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 127

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 39/63 (61%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           ++  I    R++V  W  KV V IRE+Y K+G++ PG KGI+LS   W  ++++ + I+K
Sbjct: 62  LLLNIGGKNRLTVSKWNNKVLVGIREYYTKDGQEKPGAKGIALSPASWKMIKENADLIDK 121

Query: 101 ALG 103
            + 
Sbjct: 122 TIA 124


>gi|358255846|dbj|GAA57477.1| activated RNA polymerase II transcriptional coactivator p15
           [Clonorchis sinensis]
          Length = 68

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 44/61 (72%), Gaps = 2/61 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           + +++  + VSVR ++G+ +VDIREFY     G+  PGKKGISL+V+QW+ L+  + EI+
Sbjct: 1   MIDLTGKKFVSVRQFKGRTFVDIREFYEDKSTGEMKPGKKGISLNVEQWDYLKSVMSEID 60

Query: 100 K 100
           +
Sbjct: 61  R 61


>gi|328909177|gb|AEB61256.1| activated RNA polymerase II transcriptional coactivator p15-like
           protein, partial [Equus caballus]
          Length = 58

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 44/55 (80%), Gaps = 1/55 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R VSVR+++GKV +DIRE+++  EG+  PG+KGISL+ +QW+ L++ + +I+ A+
Sbjct: 1   RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAV 55


>gi|405117495|gb|AFR92270.1| hypothetical protein CNAG_00133 [Cryptococcus neoformans var.
           grubii H99]
          Length = 127

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +S+ RR++VR ++GK  VDIRE Y     G   PG KGISL+ +QW  L+++++ +++ +
Sbjct: 63  LSEYRRLTVRTFKGKTLVDIREIYKDKSSGALKPGSKGISLTAEQWEVLKNNIQNVDEMV 122


>gi|403218596|emb|CCK73086.1| hypothetical protein KNAG_0M02330 [Kazachstania naganishii CBS
           8797]
          Length = 298

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+ +  G+  PGKKGISL+ D ++ L  H   I
Sbjct: 44  AIFDLGKNKRVTVRQFRNINLIDIREYYLDQSSGEMRPGKKGISLTEDLYDELLRHRLNI 103

Query: 99  NKAL 102
           ++AL
Sbjct: 104 DEAL 107


>gi|366988927|ref|XP_003674231.1| hypothetical protein NCAS_0A12930 [Naumovozyma castellii CBS 4309]
 gi|342300094|emb|CCC67851.1| hypothetical protein NCAS_0A12930 [Naumovozyma castellii CBS 4309]
          Length = 283

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 39  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSSGEMRPGKKGISLTEDLYDELLKHRLNI 98

Query: 99  NKAL 102
           ++AL
Sbjct: 99  DEAL 102


>gi|409080615|gb|EKM80975.1| hypothetical protein AGABI1DRAFT_127024 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 141

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++ K +R +VR+++    +DIREFY    ++ PGKKGISL+++QW  L+++ + I++  
Sbjct: 74  IDLGKKKRATVRSFKDIPLLDIREFYGTGSEEKPGKKGISLTLEQWQVLKENSDTIDELF 133

Query: 103 GDNS 106
            D S
Sbjct: 134 SDLS 137


>gi|393217464|gb|EJD02953.1| PC4-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 154

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 41/60 (68%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++ K RR +VR+++G  ++DIREF+  E    PGKKGISL+ +QW+ L+ ++  I+  +
Sbjct: 92  IDLGKRRRATVRSFKGVPYIDIREFFGDEDDLKPGKKGISLTKEQWSELKANMNTIDTLI 151


>gi|262401111|gb|ACY66458.1| putative RNA polymerase II transcriptional coactivator [Scylla
           paramamosain]
          Length = 93

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 36/48 (75%)

Query: 59  KVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           K+++DIREFY K+G+  PGKKGISLS  QWN L+  + +I++ + + S
Sbjct: 46  KLFIDIREFYEKDGEYLPGKKGISLSAIQWNKLKSVIPDIDEVVQEMS 93


>gi|221039826|dbj|BAH11676.1| unnamed protein product [Homo sapiens]
          Length = 123

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 43/55 (78%), Gaps = 1/55 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHV 95
           + +I K R VSVR+++G+V +DIRE+++  EG+  PG+KGISL+ +QW+ L++ +
Sbjct: 63  MFQIGKMRYVSVRDFKGEVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQI 117


>gi|401888004|gb|EJT51973.1| hypothetical protein A1Q1_06779 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 459

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +SK RRV+VR+++GK +VD+R+ YV    G+  P  KGI L+++QW+ L+  +  ++  L
Sbjct: 393 LSKTRRVTVRDFKGKTYVDLRDHYVDKNSGEMKPTGKGIMLTLEQWDALKAAMGAVDGML 452

Query: 103 GDN 105
            D 
Sbjct: 453 HDQ 455


>gi|170092293|ref|XP_001877368.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647227|gb|EDR11471.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 159

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 2/58 (3%)

Query: 30  KTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
           K  S++D D  +  ++ K +R +VR ++G V +DIREFY   G++ PGKKGISL+++Q
Sbjct: 76  KIFSTNDGDKYI--DLGKKKRATVRAFKGTVLLDIREFYEAGGEEKPGKKGISLTIEQ 131


>gi|367011068|ref|XP_003680035.1| hypothetical protein TDEL_0B06950 [Torulaspora delbrueckii]
 gi|359747693|emb|CCE90824.1| hypothetical protein TDEL_0B06950 [Torulaspora delbrueckii]
          Length = 222

 Score = 54.7 bits (130), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            V ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 35  AVFDLGKNKRVTVRQFRNVNLIDIREYYMDTSTGEMKPGKKGISLTEDLYDELLKHRLNI 94

Query: 99  NKAL 102
           ++AL
Sbjct: 95  DEAL 98


>gi|320590592|gb|EFX03035.1| RNA polymerase 2 transcriptional [Grosmannia clavigera kw1407]
          Length = 164

 Score = 54.7 bits (130), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+SK RRV +  ++    ++IRE+Y   G+  PGKKGISL++DQ+      +  I   L
Sbjct: 58  ELSKTRRVGISQFKNNTLINIREYYESAGQMRPGKKGISLTLDQFKMFMKALPHIKAEL 116


>gi|365759066|gb|EHN00879.1| Sub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 309

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 40  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 99

Query: 99  NKAL 102
           ++AL
Sbjct: 100 DEAL 103


>gi|401838369|gb|EJT42041.1| SUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 309

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 40  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 99

Query: 99  NKAL 102
           ++AL
Sbjct: 100 DEAL 103


>gi|402592960|gb|EJW86887.1| hypothetical protein WUBG_02199 [Wuchereria bancrofti]
          Length = 122

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 7/105 (6%)

Query: 5   GKRKE----EEEYDSDGSVDGHAPPKKASKTDSS-DDSDDIVVCEISKNRRVSVRNWQGK 59
           G++KE     E   SD S+    P KK      S  +SD   + E+ K R V+VR+++GK
Sbjct: 15  GRKKEAKRVRENSTSDESIIDKNPVKKGRTNGGSFKNSDGEEMFELGKMRFVTVRSFKGK 74

Query: 60  VWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
             +DIRE+Y  +  G+  PG+KGISLS +Q+  L+  + +I++ L
Sbjct: 75  SLIDIREYYQDKGSGELKPGRKGISLSEEQYQRLKAIMGDIDEKL 119


>gi|156836832|ref|XP_001642458.1| hypothetical protein Kpol_262p5 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112989|gb|EDO14600.1| hypothetical protein Kpol_262p5 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 293

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + +I KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++    H   I
Sbjct: 44  AIFDIGKNKRVTVRQFRNVNLIDIREYYLDNSTGEMRPGKKGISLTEDLYDEFLKHRLNI 103

Query: 99  NKAL 102
           ++AL
Sbjct: 104 DEAL 107


>gi|260947210|ref|XP_002617902.1| hypothetical protein CLUG_01361 [Clavispora lusitaniae ATCC 42720]
 gi|238847774|gb|EEQ37238.1| hypothetical protein CLUG_01361 [Clavispora lusitaniae ATCC 42720]
          Length = 117

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 29  SKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKF--PGKKGISLSVD 86
           ++ +S DD    +  E+   + V+V +++G   VDIRE+Y     K   PGKKGI+L+V+
Sbjct: 8   TQKESGDDKTTQLSLELDSKKAVTVSSFKGIPLVDIREYYTDASTKERKPGKKGIALTVE 67

Query: 87  QWNTLRDHVEEINKAL 102
            W  L +   EIN+AL
Sbjct: 68  TWKKLLESQNEINEAL 83


>gi|365983152|ref|XP_003668409.1| hypothetical protein NDAI_0B01320 [Naumovozyma dairenensis CBS 421]
 gi|343767176|emb|CCD23166.1| hypothetical protein NDAI_0B01320 [Naumovozyma dairenensis CBS 421]
          Length = 299

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 40  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSSGEMKPGKKGISLTEDLYDELLKHRLNI 99

Query: 99  NKAL 102
           ++AL
Sbjct: 100 DEAL 103


>gi|367023691|ref|XP_003661130.1| hypothetical protein MYCTH_2300175 [Myceliophthora thermophila ATCC
           42464]
 gi|347008398|gb|AEO55885.1| hypothetical protein MYCTH_2300175 [Myceliophthora thermophila ATCC
           42464]
          Length = 146

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           EI  NRR+    ++G   V+IRE+Y   +G+  PGKKGISL+++Q+  L   + E+N+ L
Sbjct: 46  EIGNNRRIGSSKFKGSTLVNIREYYTAPDGELRPGKKGISLTLEQYKALLRVIPELNEQL 105


>gi|349580325|dbj|GAA25485.1| K7_Sub1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 291

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 39  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 98

Query: 99  NKAL 102
           ++AL
Sbjct: 99  DEAL 102


>gi|6323682|ref|NP_013753.1| Sub1p [Saccharomyces cerevisiae S288c]
 gi|1711571|sp|P54000.1|SUB1_YEAST RecName: Full=RNA polymerase II transcriptional coactivator SUB1
 gi|695719|emb|CAA88405.1| unknown [Saccharomyces cerevisiae]
 gi|151946200|gb|EDN64431.1| transcriptional coactivator [Saccharomyces cerevisiae YJM789]
 gi|190408276|gb|EDV11541.1| RNA polymerase II transcriptional coactivator SUB1 [Saccharomyces
           cerevisiae RM11-1a]
 gi|256273454|gb|EEU08388.1| Sub1p [Saccharomyces cerevisiae JAY291]
 gi|259148617|emb|CAY81862.1| Sub1p [Saccharomyces cerevisiae EC1118]
 gi|285814043|tpg|DAA09938.1| TPA: Sub1p [Saccharomyces cerevisiae S288c]
 gi|323332024|gb|EGA73435.1| Sub1p [Saccharomyces cerevisiae AWRI796]
 gi|323336253|gb|EGA77524.1| Sub1p [Saccharomyces cerevisiae Vin13]
 gi|323347141|gb|EGA81416.1| Sub1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323353033|gb|EGA85333.1| Sub1p [Saccharomyces cerevisiae VL3]
 gi|365763770|gb|EHN05296.1| Sub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392297201|gb|EIW08301.1| Sub1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 292

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 39  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 98

Query: 99  NKAL 102
           ++AL
Sbjct: 99  DEAL 102


>gi|401624392|gb|EJS42452.1| sub1p [Saccharomyces arboricola H-6]
          Length = 294

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 40  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 99

Query: 99  NKAL 102
           ++AL
Sbjct: 100 DEAL 103


>gi|323303572|gb|EGA57363.1| Sub1p [Saccharomyces cerevisiae FostersB]
          Length = 288

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++ L  H   I
Sbjct: 39  AIFDLGKNKRVTVRQFRNINLIDIREYYLDSSTGEMKPGKKGISLTEDLYDELLKHRLNI 98

Query: 99  NKAL 102
           ++AL
Sbjct: 99  DEAL 102


>gi|363749277|ref|XP_003644856.1| hypothetical protein Ecym_2297 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356888489|gb|AET38039.1| Hypothetical protein Ecym_2297 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 266

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 38  DDIVVCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHV 95
           +D +  E+ KN+RV+VR ++    VDIRE+Y     G+  PGKKGISL+ +Q++ L  + 
Sbjct: 50  EDNIFFELGKNKRVTVRQFRNINLVDIREYYQDAGTGEMKPGKKGISLTEEQYDELLHNR 109

Query: 96  EEINKAL 102
            +I+ AL
Sbjct: 110 FQIDDAL 116


>gi|426197530|gb|EKV47457.1| hypothetical protein AGABI2DRAFT_70431, partial [Agaricus bisporus
           var. bisporus H97]
          Length = 76

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++ K +R +VR+++    +DIREFY    ++ PGKKGISL+++QW  L+++ + I++  
Sbjct: 9   IDLGKKKRATVRSFKDIPLLDIREFYGTGSEEKPGKKGISLTLEQWQVLKENSDTIDELF 68

Query: 103 GDNS 106
            D S
Sbjct: 69  SDLS 72


>gi|17542398|ref|NP_501750.1| Protein T13F2.2 [Caenorhabditis elegans]
 gi|37089590|sp|Q94045.1|TCP4_CAEEL RecName: Full=Putative RNA polymerase II transcriptional
           coactivator
 gi|3879829|emb|CAB03353.1| Protein T13F2.2 [Caenorhabditis elegans]
          Length = 124

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRD 93
           DSD   + EI   R  +V  ++GK +V+IRE+Y+     K  P +KGISLS  QW  L+D
Sbjct: 56  DSDGNEMFEIGNLRYATVSKFKGKEYVNIREYYIDRDSQKMMPSRKGISLSKAQWANLKD 115

Query: 94  HVEEINKAL 102
            + EI+K  
Sbjct: 116 LIPEIDKKF 124


>gi|302503986|ref|XP_003013952.1| RNA polymerase II transcriptional coactivator, putative
           [Arthroderma benhamiae CBS 112371]
 gi|291177519|gb|EFE33312.1| RNA polymerase II transcriptional coactivator, putative
           [Arthroderma benhamiae CBS 112371]
          Length = 170

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 12/76 (15%)

Query: 27  KASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVD 86
           KA KTDS+ D       EIS+ RRV++  ++G+V V++RE+Y K+G++ PGKK       
Sbjct: 47  KAPKTDSNGDP----YWEISRQRRVTISTFKGRVLVNVREYYEKDGQELPGKK------- 95

Query: 87  QWNTLRDHVEEINKAL 102
            +N+L   + EI+  +
Sbjct: 96  -FNSLVTLLPEISAVI 110


>gi|169847077|ref|XP_001830250.1| hypothetical protein CC1G_01886 [Coprinopsis cinerea okayama7#130]
 gi|116508502|gb|EAU91397.1| hypothetical protein CC1G_01886 [Coprinopsis cinerea okayama7#130]
          Length = 161

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 44/64 (68%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++ K +  +VR ++GK  +DIREF+  +    PGKKGISL+++QW  LR+ ++++++ +
Sbjct: 98  IDLGKKKFATVRTFKGKPLLDIREFWGDDDDLKPGKKGISLNLEQWQALREGIDDLDRLI 157

Query: 103 GDNS 106
            + S
Sbjct: 158 KEVS 161


>gi|402085548|gb|EJT80446.1| hypothetical protein GGTG_00445 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 169

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 22/119 (18%)

Query: 6   KRKEEEEYDSDGSVDGHA--PPKKASKTDSSD--------------------DSDDIVVC 43
           KR   EE  SDG   G A  P KK    +S                      D++     
Sbjct: 7   KRARVEEDASDGGDAGQASAPAKKVKSKESKQKEAKPKEAKSKEPTALGSGVDNEGNPYW 66

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           EIS  RRV +  +   V V+IRE+Y + G+  PGKKGISL++DQ+  L  +   IN  L
Sbjct: 67  EISAKRRVGIAKFNKMVLVNIREYYDQAGELKPGKKGISLTLDQYQALLKNAPVINAEL 125


>gi|171691751|ref|XP_001910800.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945824|emb|CAP72624.1| unnamed protein product [Podospora anserina S mat+]
          Length = 168

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           PK         D +     E+  NRRV    ++    V++RE+Y   +G+  PGKKGISL
Sbjct: 35  PKATPSGGKGTDGEGNAYWELGNNRRVGASKFKNATLVNLREYYTTPDGELRPGKKGISL 94

Query: 84  SVDQWNTLRDHVEEINKAL 102
           S+DQ+      + ++N+ L
Sbjct: 95  SIDQYKAFLKAIPQLNEEL 113


>gi|255713626|ref|XP_002553095.1| KLTH0D08822p [Lachancea thermotolerans]
 gi|238934475|emb|CAR22657.1| KLTH0D08822p [Lachancea thermotolerans CBS 6340]
          Length = 266

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + E+  N+RV+VR ++    +DIRE+Y     G+  PGKKGISL+ + ++ L  H + I
Sbjct: 28  AIFELGNNKRVTVRQFRNINLIDIREYYADSASGEMKPGKKGISLTEELYDELLKHRQNI 87

Query: 99  NKAL 102
           + AL
Sbjct: 88  DDAL 91


>gi|440639764|gb|ELR09683.1| hypothetical protein GMDG_04169 [Geomyces destructans 20631-21]
          Length = 169

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 48  NRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +RR+ +  ++G   ++IRE+Y    G   PGKKGISL +DQ+  L   + +IN AL
Sbjct: 71  SRRIGISEFKGTRLINIREYYQNPAGDLLPGKKGISLPLDQYKVLLQAIPDINAAL 126


>gi|168030673|ref|XP_001767847.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680929|gb|EDQ67361.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 121

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 43/54 (79%)

Query: 34 SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQ 87
          S D D +V  E+S+NR+V V+ ++GKV+VDIREF+ KEG + PGKKGISL +DQ
Sbjct: 27 SGDGDSVVAVELSRNRKVVVKKFKGKVFVDIREFFNKEGNELPGKKGISLPLDQ 80


>gi|241953992|ref|XP_002419717.1| RNA polymerase II transcriptional coactivator, putative [Candida
           dubliniensis CD36]
 gi|223643058|emb|CAX41932.1| RNA polymerase II transcriptional coactivator, putative [Candida
           dubliniensis CD36]
          Length = 145

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           AS T +S++    V   +   ++V+VR +     VDIREFY  KEG K PGKKGISL+ D
Sbjct: 9   ASFTSTSNE----VEISLDSKKQVTVRKFNNVNLVDIREFYTDKEGVKRPGKKGISLTED 64

Query: 87  QWNTLRDHVEEINKALGD 104
            +  L +   +I  AL D
Sbjct: 65  AYYKLLEATNKIQNALDD 82


>gi|254583338|ref|XP_002497237.1| ZYRO0F00902p [Zygosaccharomyces rouxii]
 gi|238940130|emb|CAR28304.1| ZYRO0F00902p [Zygosaccharomyces rouxii]
          Length = 237

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
              ++ KN+RV+VR ++    +DIRE+Y+    G   PGKKGISL+ D ++ L  H   I
Sbjct: 37  ATFDLGKNKRVTVRQFRNVNLIDIREYYMDTSTGDMRPGKKGISLTEDLYDELLKHRLNI 96

Query: 99  NKAL 102
           ++AL
Sbjct: 97  DEAL 100


>gi|156550787|ref|XP_001606951.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Nasonia vitripennis]
          Length = 150

 Score = 52.4 bits (124), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+  N+ V+VR+++ K +VDIRE Y+ K+G+  PG+KG+ L+++ W +    VE+++KA+
Sbjct: 86  ELGGNKHVTVRSFKNKWFVDIREMYMDKDGEMKPGRKGVCLNMENWKSFMKVVEDVDKAV 145


>gi|225719560|gb|ACO15626.1| Activated RNA polymerase II transcriptional coactivator p15
           [Caligus clemensi]
          Length = 113

 Score = 52.4 bits (124), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGK--KFPGKKGISLSVDQWNTLRDHVEEINKA 101
            +  N+ V VR ++GK ++DIRE+YV +      PGKKGISL+  Q+  L+  + +I+ +
Sbjct: 52  HLGNNKHVKVREFKGKTYIDIREYYVDKNTMDTKPGKKGISLNTQQYQELKQVIADIDAS 111

Query: 102 L 102
           L
Sbjct: 112 L 112


>gi|50287609|ref|XP_446234.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525541|emb|CAG59158.1| unnamed protein product [Candida glabrata]
          Length = 277

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + ++ KN+RV+VR ++    +DIRE+Y+    G+  PGKKGISL+ D ++    H   I
Sbjct: 37  AIFDLGKNKRVTVRQFRNINLIDIREYYMDNATGEMRPGKKGISLTEDLYDEFLRHRLNI 96

Query: 99  NKAL 102
           + AL
Sbjct: 97  DDAL 100


>gi|444727520|gb|ELW68008.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
           chinensis]
          Length = 151

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +I K R VSVR+++GKV  D RE+++  EG+  PG+KGIS   +QW  L++ + +I+  L
Sbjct: 65  QIGKMRHVSVRDFKGKVLTDTREYWMDPEGEMKPGRKGISSDPEQWKQLKEQISDIDDVL 124


>gi|302422106|ref|XP_003008883.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261352029|gb|EEY14457.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 160

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           E+S  RR+ +  ++    ++IRE+Y K+    PGKKGISLS+ Q+  L      I+  L 
Sbjct: 53  ELSSKRRIGISKFKDMTMINIREYYQKDDDMLPGKKGISLSLPQFEALLKAAPAISAKLR 112

Query: 104 D 104
           D
Sbjct: 113 D 113


>gi|119586031|gb|EAW65627.1| hCG17750 [Homo sapiens]
          Length = 127

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +I K R VSV +++GKV +D RE+++  EG+  PG+KGI+L+ +QW+ L++ +  I+ A+
Sbjct: 65  QIGKMRYVSVGDFKGKVLIDTREYWMDPEGEMKPGRKGIALNPEQWSQLKEQISVIDDAV 124


>gi|123421330|ref|XP_001305970.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121887519|gb|EAX93040.1| hypothetical protein TVAG_255210 [Trichomonas vaginalis G3]
          Length = 96

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRD---HVEEINKALGDN 105
           +R+ V  ++GK+  DIRE Y K+ +  PGKKGISL V+ +  L++    VEE   ALG N
Sbjct: 31  KRIQVHKFKGKILFDIRELYCKDDEWLPGKKGISLRVEDFKKLKELMPLVEEAIVALGGN 90


>gi|50422445|ref|XP_459788.1| DEHA2E11044p [Debaryomyces hansenii CBS767]
 gi|49655456|emb|CAG88027.1| DEHA2E11044p [Debaryomyces hansenii CBS767]
          Length = 135

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 26  KKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISL 83
           K  S T SS+D     V E+ K ++++VR +     VDIREFYV +   +K PGKKGISL
Sbjct: 10  KNTSDTSSSNDK----VIELDKKKQITVRKFNNVNLVDIREFYVDKDTNEKKPGKKGISL 65

Query: 84  SVDQWNTLRDHVEEINKAL 102
           + D W  L     ++  AL
Sbjct: 66  TEDVWLKLVQSSSDVQDAL 84


>gi|225711344|gb|ACO11518.1| Activated RNA polymerase II transcriptional coactivator p15
           [Caligus rogercresseyi]
          Length = 112

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGK--KFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +  N+ V VR ++GK ++DIRE+YV +      PGKKGISL+  Q+  L+  + +I+ +L
Sbjct: 52  LGNNKHVKVREFKGKTYIDIREYYVDKSTMDTKPGKKGISLNTQQYQELKQIIADIDASL 111


>gi|395835158|ref|XP_003790549.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Otolemur garnettii]
          Length = 128

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 43/62 (69%), Gaps = 1/62 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           + +I   R +SV +++GKV  D REF++  EG+  PG+KG SL+++QW+ L++ + + + 
Sbjct: 64  MFQIGNMRYISVLDFKGKVLTDTREFWMDPEGEMKPGRKGFSLNLEQWSQLKEQISDFDD 123

Query: 101 AL 102
           A+
Sbjct: 124 AV 125


>gi|367007268|ref|XP_003688364.1| hypothetical protein TPHA_0N01490 [Tetrapisispora phaffii CBS 4417]
 gi|357526672|emb|CCE65930.1| hypothetical protein TPHA_0N01490 [Tetrapisispora phaffii CBS 4417]
          Length = 314

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            + +I KN+RV+VR ++    +DIRE+Y+     +  PGKKGISL+ D ++    H   I
Sbjct: 53  AIFDIGKNKRVTVRQFRNINLIDIREYYMDNSSNEMRPGKKGISLTEDLYDEFLKHRLNI 112

Query: 99  NKAL 102
           ++AL
Sbjct: 113 DEAL 116


>gi|452981386|gb|EME81146.1| hypothetical protein MYCFIDRAFT_89755 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 177

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 6   KRKEEEEYDSDGSVDGHAPPKKASKTDSSDD-----SDDIVVCEISKNRRVSVRNWQGKV 60
           KR   E+Y+ DG     AP  K SK   +D      +D  V  EIS  +R++V  ++   
Sbjct: 3   KRAAGEQYEDDGGFVEDAPKSKKSKGAKADGGMQKGADGEVYWEISSRKRLTVSEYKKTT 62

Query: 61  WVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
            ++IR++Y K+GK  PG KG +LS +Q N +   + E+   L
Sbjct: 63  LINIRDYYEKDGKMLPG-KGTALSTEQLNAVITLLPELESVL 103


>gi|346970039|gb|EGY13491.1| hypothetical protein VDAG_00173 [Verticillium dahliae VdLs.17]
          Length = 160

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
           E+S  RR+ +  ++    ++IRE+Y K+    PGKKGISLS+ Q+  L      I+  L 
Sbjct: 54  ELSSKRRIGISKFKDMTMINIREYYQKDDDMLPGKKGISLSLPQFEALLKAAPAISAKLR 113

Query: 104 D 104
           D
Sbjct: 114 D 114


>gi|225714662|gb|ACO13177.1| Activated RNA polymerase II transcriptional coactivator p15
           [Lepeophtheirus salmonis]
 gi|290561549|gb|ADD38175.1| Activated RNA polymerase II transcriptional coactivator p15
           [Lepeophtheirus salmonis]
          Length = 120

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 2/61 (3%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGK--KFPGKKGISLSVDQWNTLRDHVEEINKA 101
            +  N+ V VR ++GK +VDIRE+YV +      PGKKGISL+  Q+  L+  + +I+ +
Sbjct: 59  HLGNNKHVKVREFKGKTYVDIREYYVDKSTMDTKPGKKGISLNTLQYQELKQIISQIDAS 118

Query: 102 L 102
           L
Sbjct: 119 L 119


>gi|392569662|gb|EIW62835.1| RNA polymerase II transcriptional coactivator [Trametes
          versicolor FP-101664 SS1]
          Length = 95

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%)

Query: 43 CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLR 92
           ++ K RR +VR ++G  ++DIREFY  +    PGKKG+S++ +QW  L+
Sbjct: 31 VDLGKKRRATVRQYKGSTFLDIREFYGDDNDLKPGKKGVSINKEQWEALK 80


>gi|444706203|gb|ELW47555.1| Activated RNA polymerase II transcriptional coactivator p15 [Tupaia
           chinensis]
          Length = 127

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 42/59 (71%), Gaps = 1/59 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           + +  K   VSV +++G + +DIRE+++  EG+  PG+KGISL+ +QW+ LR+ + EI+
Sbjct: 63  MFQTGKMSYVSVWDFKGNILIDIREYWMDPEGEMKPGRKGISLNPEQWSQLREQISEID 121


>gi|410057609|ref|XP_003954243.1| PREDICTED: activated RNA polymerase II transcriptional coactivator
           p15-like [Pan troglodytes]
          Length = 127

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 44/60 (73%), Gaps = 1/60 (1%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           ++ K R VSV +++GKV ++ RE+++  EG+  PG+KGISL+ +QW+ L++ +  I+ A+
Sbjct: 65  QVGKMRYVSVGDFKGKVLIETREYWMDPEGEMKPGRKGISLNPEQWSPLKEQISVIDDAV 124


>gi|406860728|gb|EKD13785.1| transcriptional Coactivator p15 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 153

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 35/54 (64%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RR++V  ++G   + IRE+Y K G+  PG KG+SL+++Q+  L   + E+N  L
Sbjct: 54  RRLNVSEFKGSKLISIREYYEKNGEYKPGSKGVSLNIEQYKALLKSIPELNAHL 107


>gi|384485566|gb|EIE77746.1| hypothetical protein RO3G_02450 [Rhizopus delemar RA 99-880]
          Length = 126

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)

Query: 23  APPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQ-GKVWVDIREFYVKE--GKKFPGKK 79
           A  K+  +T+  D  D I   E+S  RRV+VR +  G+  VDIREFY  +  G+  PGK 
Sbjct: 40  AGEKRKRETNKDDKGDQIF--ELSAKRRVTVRLFSTGEPSVDIREFYKDKNTGEMRPGKA 97

Query: 80  GISLSVDQWNTLRDHVEEINKAL 102
           GI   + QW+ L++ + +I++A+
Sbjct: 98  GICFPLAQWHKLKELIPDIDEAI 120


>gi|320170836|gb|EFW47735.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 135

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           RR++VR + GK +VDIREFY  + G+  PGKKGI L+ +Q+  L    + I  AL
Sbjct: 78  RRITVRRFSGKKYVDIREFYDDDSGELKPGKKGIMLNEEQFTALLGMADNIRNAL 132


>gi|56755121|gb|AAW25740.1| unknown [Schistosoma japonicum]
 gi|60687690|gb|AAX30178.1| SJCHGC01506 protein [Schistosoma japonicum]
          Length = 117

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           + +++  +   VR+++GKV+VDIRE+Y     G+  PGKKGISL+ +QW  L+  + E++
Sbjct: 50  LIDLTGKKFACVRDFRGKVFVDIREYYEDKSSGELKPGKKGISLNSEQWEYLKSSIGELD 109


>gi|388582791|gb|EIM23095.1| hypothetical protein WALSEDRAFT_44047 [Wallemia sebi CBS 633.66]
          Length = 127

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 8/80 (10%)

Query: 32  DSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLS------ 84
           D  +++D     EI ++RRV++R ++    +D+REF+ KE G   PGKKGISL       
Sbjct: 43  DIQENADGEKYFEIGRSRRVTMRTFKNTPLIDVREFWTKEDGTPAPGKKGISLKPEELQL 102

Query: 85  -VDQWNTLRDHVEEINKALG 103
            VD ++++++ V++++ + G
Sbjct: 103 IVDNYSSIKEIVDDLSSSTG 122


>gi|449299659|gb|EMC95672.1| hypothetical protein BAUCODRAFT_498768 [Baudoinia compniacensis
           UAMH 10762]
          Length = 181

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 16/112 (14%)

Query: 7   RKEEEEYDSDGSVDGHAPPKKASK-------------TDSSDDSDDIVVCEISK---NRR 50
           ++ +E+Y+ DG     AP  K  K             + +  D D     E+S+    RR
Sbjct: 3   KRSQEDYEDDGGFVEDAPKSKKQKDRNDNGAAETTLNSGTQIDEDGNEYWELSRGRNTRR 62

Query: 51  VSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           V + +++    V++REFY K+ K  PGKKGISL ++Q+      +  I  AL
Sbjct: 63  VGISSFKDNTLVNLREFYQKDDKWLPGKKGISLPIEQFEAFIGALPAIEAAL 114


>gi|68485433|ref|XP_713394.1| hypothetical protein CaO19.13111 [Candida albicans SC5314]
 gi|68485528|ref|XP_713347.1| hypothetical protein CaO19.5666 [Candida albicans SC5314]
 gi|46434830|gb|EAK94230.1| hypothetical protein CaO19.5666 [Candida albicans SC5314]
 gi|46434878|gb|EAK94277.1| hypothetical protein CaO19.13111 [Candida albicans SC5314]
 gi|238881780|gb|EEQ45418.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 146

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 34  SDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLR 92
           + +S+++ +   SK ++V+VR +     VDIREFY  ++G K PGKKGISL+ D +  L 
Sbjct: 9   ASNSNEVEILLDSK-KQVTVRKYNNVNLVDIREFYTDRDGVKRPGKKGISLTEDTYYKLL 67

Query: 93  DHVEEINKALGD 104
           +   +I  AL D
Sbjct: 68  EATNKIQNALDD 79


>gi|256086766|ref|XP_002579560.1| hypothetical protein [Schistosoma mansoni]
 gi|353229573|emb|CCD75744.1| hypothetical protein Smp_084620 [Schistosoma mansoni]
          Length = 117

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 42/60 (70%), Gaps = 2/60 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKE--GKKFPGKKGISLSVDQWNTLRDHVEEIN 99
           + +++  +   VR ++GK +VDIRE+Y ++  G+  PGKKGISL+++QW  L+  + E++
Sbjct: 50  LIDLTGKKFACVREFRGKAFVDIREYYEEKSSGELKPGKKGISLNLEQWEYLKSSIGELD 109


>gi|346324023|gb|EGX93621.1| RNA polymerase II transcriptional coactivator [Cordyceps militaris
           CM01]
          Length = 150

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKK--GISLSVDQWNTLRDHVEEINKA 101
           EIS  RRV +  ++G   + IRE+Y K GK   GKK  GIS+ VDQ+  L   +  I+  
Sbjct: 47  EISNTRRVGISEFKGVCMISIREYYEKNGKLLHGKKIQGISMPVDQYAALLKLLPSISGK 106

Query: 102 L 102
           L
Sbjct: 107 L 107


>gi|428184812|gb|EKX53666.1| hypothetical protein GUITHDRAFT_100644 [Guillardia theta CCMP2712]
          Length = 115

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 3/58 (5%)

Query: 48  NRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWN---TLRDHVEEINKAL 102
            +R++V  ++G V + +RE+Y K+G   PGK GI+LS +QW    +L + V+E  KAL
Sbjct: 55  QKRITVNKFKGNVNIHLREYYEKDGDFLPGKAGIALSQEQWKLAISLAEQVKEAVKAL 112


>gi|298711481|emb|CBJ26569.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 102

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 1/57 (1%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           +S  R+  VR ++G+  VDIR+++   EG+  P KKGI+L++ QW  L++ + +I+K
Sbjct: 7   LSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDK 63


>gi|354547746|emb|CCE44481.1| hypothetical protein CPAR2_402830 [Candida parapsilosis]
          Length = 193

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           ++K+    D+    +  +   +RV+VR +     VDIREFY    G + PGKKGISL+ D
Sbjct: 10  SAKSTQQQDNPPETIINLDAKKRVTVRKFNNVNLVDIREFYTDANGDQKPGKKGISLTED 69

Query: 87  QWNTLRDHVEEINKAL 102
            +  L D    I  AL
Sbjct: 70  TYYKLIDAHNRIQHAL 85


>gi|396500911|ref|XP_003845843.1| hypothetical protein LEMA_P011510.1 [Leptosphaeria maculans JN3]
 gi|312222424|emb|CBY02364.1| hypothetical protein LEMA_P011510.1 [Leptosphaeria maculans JN3]
          Length = 175

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQWNTL 91
           +D +D +    S  RR +V  ++    + IRE++  + G+  PGKKGISL++DQ+ TL
Sbjct: 64  EDGNDYIALNASGKRRATVSEFKDNTLISIREYWTNDSGELKPGKKGISLTIDQYQTL 121


>gi|302680288|ref|XP_003029826.1| hypothetical protein SCHCODRAFT_111557 [Schizophyllum commune H4-8]
 gi|300103516|gb|EFI94923.1| hypothetical protein SCHCODRAFT_111557, partial [Schizophyllum
           commune H4-8]
          Length = 174

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 39  DIVVCEISKNRRVSVRNWQGKVWVDIREFYV--KEGKKFPGKKGISLSVDQWNTLRDHVE 96
           D+   ++   +R S   ++G+ +++IRE+YV    G++ PGKKGI+L+ +QW   + +++
Sbjct: 106 DMKYVDLGGKKRASASEFKGQRYINIREYYVDKASGEEKPGKKGIALNAEQWKVFKQNID 165

Query: 97  EINKALG 103
            +++   
Sbjct: 166 TLDELFA 172


>gi|448116191|ref|XP_004202995.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
 gi|359383863|emb|CCE79779.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
          Length = 152

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           VV E+ K ++V+VR +     VDIREF+   +  +K P KKGISL+ + W  L   + EI
Sbjct: 24  VVIELDKKKQVTVRKFNNINLVDIREFFEDRETNEKKPTKKGISLTEESWKKLVSSIGEI 83

Query: 99  NKAL 102
             AL
Sbjct: 84  QDAL 87


>gi|344232500|gb|EGV64379.1| ssDNA-binding transcriptional regulator [Candida tenuis ATCC 10573]
 gi|344232501|gb|EGV64380.1| hypothetical protein CANTEDRAFT_114169 [Candida tenuis ATCC 10573]
          Length = 106

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYV----KEGKKFPGKKGISLSVDQWNTLRDHVE 96
            V  +   ++V+VR ++    VDIREFYV    KE K  PGKKGISL+ + W  L     
Sbjct: 15  TVIPLDNYKQVTVRRFKTMNLVDIREFYVDKVTKEKK--PGKKGISLTEEMWKKLMASQH 72

Query: 97  EINKAL 102
           +I +AL
Sbjct: 73  QIQEAL 78


>gi|448113539|ref|XP_004202376.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
 gi|359465365|emb|CCE89070.1| Piso0_001868 [Millerozyma farinosa CBS 7064]
          Length = 180

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
            V E+ K ++V+VR +     VDIREF+   + G+K P KKGISL+ + W  L   V +I
Sbjct: 52  TVIELDKKKQVTVRKFNNINLVDIREFFEDKETGEKKPTKKGISLTEESWKKLVSSVGKI 111

Query: 99  NKAL 102
             AL
Sbjct: 112 QDAL 115


>gi|339233212|ref|XP_003381723.1| RNA polymerase II transcriptional coactivator [Trichinella
           spiralis]
 gi|316979427|gb|EFV62223.1| RNA polymerase II transcriptional coactivator [Trichinella
           spiralis]
          Length = 144

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFY-VKEGKKFPGKKGIS 82
           PP K  K +  ++SD+  + ++   + V V  ++G+  VDIRE++   +G+  P KKGIS
Sbjct: 58  PPTKKGKIEQPEESDEFKL-DLGGRKFVHVNEFRGRKRVDIREYFQASDGQVRPTKKGIS 116

Query: 83  LSVDQWNTLRDHVEEI 98
           LS +Q+  L D  ++I
Sbjct: 117 LSHEQFQLLLDSADKI 132


>gi|344258273|gb|EGW14377.1| Activated RNA polymerase II transcriptional coactivator p15
          [Cricetulus griseus]
          Length = 59

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 40/52 (76%), Gaps = 1/52 (1%)

Query: 49 RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
          R VSVR+++G++  D RE+++  EG+   G+KGISL+V+QW+ L++ + +I+
Sbjct: 2  RYVSVRDFKGQIPFDFREYWMDSEGEMKSGRKGISLNVEQWSQLKEQISDID 53


>gi|339257036|ref|XP_003370107.1| RNA polymerase II transcriptional coactivator [Trichinella
          spiralis]
 gi|316959209|gb|EFV47594.1| RNA polymerase II transcriptional coactivator [Trichinella
          spiralis]
          Length = 102

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 24 PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFY-VKEGKKFPGKKGIS 82
          PP K  K +  ++SD+  + ++   + V V  ++G+  VDIRE++   +G+  P KKGIS
Sbjct: 16 PPTKKGKIEQPEESDEFKL-DLGGRKFVHVNEFRGRKRVDIREYFQASDGQVRPTKKGIS 74

Query: 83 LSVDQWNTLRDHVEEI 98
          LS +Q+  L D  ++I
Sbjct: 75 LSHEQFQLLLDSADKI 90


>gi|291244700|ref|XP_002742232.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
           kowalevskii]
          Length = 183

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           ++C  SK+  V++ +++GK +V IRE+Y      +P K+G++L+++Q+N   + + +IN 
Sbjct: 120 LICS-SKSLYVTINSFRGKRYVHIREYY----NGYPTKRGVALTMEQYNNFIEILPQINS 174

Query: 101 AL 102
            +
Sbjct: 175 VI 176


>gi|291223459|ref|XP_002731727.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
           kowalevskii]
 gi|291245197|ref|XP_002742477.1| PREDICTED: conserved hypothetical protein-like [Saccoglossus
           kowalevskii]
          Length = 183

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           ++C  SK+  V++ +++GK +V IRE+Y      +P K+G++L+++Q+N   + + +IN 
Sbjct: 120 LICS-SKSLYVTINSFRGKRYVHIREYY----NGYPTKRGVALTMEQYNNFIEILPQINS 174

Query: 101 AL 102
            +
Sbjct: 175 VI 176


>gi|291241408|ref|XP_002740604.1| PREDICTED: RNA polymerase II transcriptional coactivator,
           putative-like [Saccoglossus kowalevskii]
          Length = 183

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 5/62 (8%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
           ++C  SK   V++ +++GK +V IRE+Y      +P K+G++L+++Q+N   + + +IN 
Sbjct: 120 LICT-SKCLYVTINSFRGKRYVHIREYY----NGYPTKRGVALTMEQYNNFIEILPQINS 174

Query: 101 AL 102
            +
Sbjct: 175 VI 176


>gi|224081042|ref|XP_002306274.1| predicted protein [Populus trichocarpa]
 gi|222855723|gb|EEE93270.1| predicted protein [Populus trichocarpa]
          Length = 69

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 49/110 (44%), Gaps = 50/110 (45%)

Query: 1   MSGKGKRK-----EEEEYDSDGSVDGHAPP-KKASKTD-SSDDSDDIVVCEISKNRRVSV 53
           MSG+G ++     EE E  +D ++    PP KK++K D SSD+SDDIVVCE         
Sbjct: 1   MSGRGGKRAAAAREEGEGGADDNLAQQQPPAKKSAKPDNSSDNSDDIVVCE--------- 51

Query: 54  RNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALG 103
                                             WN LRDHVEEI+KALG
Sbjct: 52  ----------------------------------WNMLRDHVEEIDKALG 67


>gi|326428836|gb|EGD74406.1| hypothetical protein PTSG_06417 [Salpingoeca sp. ATCC 50818]
          Length = 261

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 25  PKKASK--TDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGIS 82
           PKK  +     + D++  +   +   RRVSV  ++G V V +RE+Y K+GK  PG KG+S
Sbjct: 94  PKKPDQESIQPTKDAEGGLHFSLDAKRRVSVTVFKGNVLVGLREWYEKDGKTLPG-KGVS 152

Query: 83  LSVDQWNTLRDHVEEINKAL 102
           L   +W +L  + +   +A 
Sbjct: 153 LKAPEWKSLVKNAKTATEAF 172



 Score = 38.5 bits (88), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 29  SKTDSSDDSDDIVVCEISKN----RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISL 83
           + T++ +  +   V E+ K     +R+S+R+++GK + D+RE Y  K G+  P +KG +L
Sbjct: 167 TATEAFEKQNFDFVTELGKTWKGQKRLSLRSYKGKSFFDVREHYEDKAGEIKPTRKGATL 226

Query: 84  SVDQWNTLRDHVEEINKALG 103
           S   W  L   +  ++KA+ 
Sbjct: 227 SDAVWKRLCTLMPHVDKAVA 246


>gi|167384020|ref|XP_001736781.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165900717|gb|EDR26966.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 143

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
            +I + R V +  ++G  ++DIREFY ++G+  PG+KGISL   ++     ++E+I K
Sbjct: 83  VQIGEKRYVRLNQFKGTKYIDIREFYERDGELKPGQKGISLKDYEFEEFVKNIEKIKK 140


>gi|167391894|ref|XP_001739938.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165896181|gb|EDR23674.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 143

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
            +I + R V +  ++G  ++DIREFY ++G+  PG+KGISL   ++     ++E+I K
Sbjct: 83  VQIGEKRYVRLNQFKGTKYIDIREFYERDGELKPGQKGISLKDYEFEEFVKNIEKIKK 140


>gi|167515870|ref|XP_001742276.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778900|gb|EDQ92514.1| predicted protein [Monosiga brevicollis MX1]
          Length = 209

 Score = 44.3 bits (103), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKKF-PGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           RR+++ +++ K++ +IREFY     ++ P KKG  L+ DQW+ L D V  ++ A+ + S
Sbjct: 149 RRLTISDFRDKLYYNIREFYKDRSDEWKPTKKGCMLTEDQWSKLMDVVPALDAAIAELS 207



 Score = 43.5 bits (101), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 19  VDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGK 78
           VD  A  +     D+  D +D     +S N+RV+V  ++    + + E Y   GK   GK
Sbjct: 48  VDTQATREAFDNQDALLDDEDNPYFPLSNNKRVTVSRFKAFTLIRLGEVYNDNGKTKQGK 107

Query: 79  KGISLSVDQWNTLRDHVEEINKALGDNS 106
            GISL   +W TL++  E   KA  +N+
Sbjct: 108 -GISLKASEWETLKEISESAEKAFAENN 134


>gi|428183678|gb|EKX52535.1| hypothetical protein GUITHDRAFT_133607 [Guillardia theta CCMP2712]
          Length = 187

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 44  EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           EI++ RR++V  ++ + +V IREFY K+G+  PGKKG
Sbjct: 151 EITQ-RRLTVSKYRDQTYVSIREFYAKDGQMLPGKKG 186


>gi|448530178|ref|XP_003870006.1| hypothetical protein CORT_0E02870 [Candida orthopsilosis Co 90-125]
 gi|380354360|emb|CCG23875.1| hypothetical protein CORT_0E02870 [Candida orthopsilosis]
          Length = 169

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           +RV+VR +     VDIREFY    G + PGKKGISL+ + +  L +   +I  AL
Sbjct: 29  KRVTVRRFNNVNLVDIREFYTDANGDQKPGKKGISLTEETYFKLIEAHNKIQHAL 83


>gi|321251041|ref|XP_003191940.1| hypothetical protein CGB_B1430W [Cryptococcus gattii WM276]
 gi|317458408|gb|ADV20153.1| Hypothetical Protein CGB_B1430W [Cryptococcus gattii WM276]
          Length = 143

 Score = 43.9 bits (102), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 49  RRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTL 91
           RR++VR ++GK  VDIRE Y     G   PG KGISL+ +Q +  
Sbjct: 96  RRLTVRTFKGKTLVDIREMYKDKSSGALKPGSKGISLTAEQVSAF 140


>gi|290979690|ref|XP_002672566.1| predicted protein [Naegleria gruberi]
 gi|284086144|gb|EFC39822.1| predicted protein [Naegleria gruberi]
          Length = 161

 Score = 43.1 bits (100), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 5/90 (5%)

Query: 14  DSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGK 73
           DSD   +     +K+S   +  D+ D+VV   +  +R++V  ++   +V IRE+Y  E K
Sbjct: 76  DSDNEDEPSEKKQKSSHKITKADNGDLVVF-FTDKKRITVNEFKKSKYVHIREYY--EDK 132

Query: 74  KFPGKKGISLSVDQWNTLRDHVEEINKALG 103
             P KKG+++S D+W   + +++ I++ + 
Sbjct: 133 --PTKKGVAMSRDEWTRFKTYIDTIDEMMN 160


>gi|361128496|gb|EHL00431.1| putative RNA polymerase II transcriptional coactivator [Glarea
          lozoyensis 74030]
          Length = 140

 Score = 43.1 bits (100), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 1  MSGKGKRKEEEEYDSDGSV---DGHAPPK-----KASKTDSSDDSDDIVVCEISKNR--- 49
          M  +G+ KE EEY+SDG     DGH  PK     K +    S  +      E+S  R   
Sbjct: 1  MPKRGRGKEVEEYESDGGFVEDDGHEVPKSKKNKKTAVVSKSTGASGSSFWELSSGRTPR 60

Query: 50 RVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSV 85
          RV +  ++    V+IREFY K  +  PGKK I+ S+
Sbjct: 61 RVEITEFKNMKLVNIREFYEKNDEYLPGKK-ITASL 95


>gi|116748724|ref|YP_845411.1| hypothetical protein Sfum_1284 [Syntrophobacter fumaroxidans MPOB]
 gi|116697788|gb|ABK16976.1| hypothetical protein Sfum_1284 [Syntrophobacter fumaroxidans MPOB]
          Length = 75

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 50  RVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGD 104
           R S+  ++GK +VD+R +Y   +G+  P KKG++LS+D ++ L + V ++ +A+G+
Sbjct: 20  RASLTVFKGKDYVDLRIYYKGDDGEYHPSKKGLTLSLDLFSELEESVRKLAEAIGE 75


>gi|407038545|gb|EKE39180.1| transcriptional coactivator, putative [Entamoeba nuttalli P19]
          Length = 150

 Score = 42.7 bits (99), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 39/58 (67%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
            ++ + + V +  ++G  ++D+REFY ++G+  PG+KGISL   ++  L +++++I K
Sbjct: 90  VQLGERKYVRLNQFKGTKYIDVREFYERDGELKPGQKGISLKDYEFEELVNNIDKIKK 147


>gi|67476631|ref|XP_653878.1| transcriptional coactivator [Entamoeba histolytica HM-1:IMSS]
 gi|56470877|gb|EAL48492.1| transcriptional coactivator, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|449702812|gb|EMD43378.1| transcriptional coactivator p15 (PC4) protein, putative [Entamoeba
           histolytica KU27]
          Length = 151

 Score = 42.4 bits (98), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 39/58 (67%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINK 100
            ++ + + V +  ++G  ++D+REFY ++G+  PG+KGISL   ++  L +++++I K
Sbjct: 91  VQLGERKYVRLNQFRGTKYIDVREFYERDGELKPGQKGISLKDYEFEELVNNIDKIKK 148


>gi|440291984|gb|ELP85226.1| hypothetical protein EIN_083680 [Entamoeba invadens IP1]
          Length = 127

 Score = 42.0 bits (97), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 20  DGHAPPKKASKTDSSDDSDDIV----------VCEISKNRRVSVRNWQGKVWVDIREFYV 69
           D    P+K++KT    ++++            +  +S  +      ++GK ++ IRE Y 
Sbjct: 34  DTKKTPRKSTKTSKPQETEEEFKEKVGFEYDEIFRLSNTKVCQKSGFKGKTYLGIREIYE 93

Query: 70  KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           K+GK   GKKGI+++ D++    +H  +I
Sbjct: 94  KDGKYQLGKKGINMNQDEFAIFSEHFNDI 122


>gi|281206070|gb|EFA80259.1| hypothetical protein PPL_07085 [Polysphondylium pallidum PN500]
          Length = 225

 Score = 41.6 bits (96), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 2/60 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHVEEIN 99
             ++   ++VS+  + G+  ++IR +Y  V  G + P K+GI+LS +Q+N + ++ ++IN
Sbjct: 133 FIDLGNKKKVSISTYTGEPRLNIRSYYESVDNGTEIPTKRGITLSREQFNIILNNADKIN 192


>gi|405964328|gb|EKC29825.1| Fucolectin-6 [Crassostrea gigas]
          Length = 495

 Score = 41.6 bits (96), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKALGD 104
           +   R V V  W+ K  VD R++ +  G++ P KKGISL + Q   L   ++ + + L  
Sbjct: 9   LQNGRYVKVSEWKKKPRVDFRQYELCNGQEIPTKKGISLKMIQLKNLLSVMDSVQETLSK 68

Query: 105 N 105
           N
Sbjct: 69  N 69


>gi|303291246|ref|XP_003064909.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
 gi|226453580|gb|EEH50889.1| transcriptional coactivator p15 [Micromonas pusilla CCMP1545]
          Length = 328

 Score = 41.2 bits (95), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 38  DDIVVCEISKNRRVSVRNWQGKVWVDIREFY--VKEGKKFPGKKGISLSVDQWNTLRDHV 95
           +DI +C++S  R+  V  ++G+V + I ++Y   K  +  P K GIS+ ++QW TL+ + 
Sbjct: 257 NDIDICDLSSLRKAKVGRYRGEVRIAIFDWYQDSKSKQLRPSKTGISMPMEQWKTLQANR 316

Query: 96  EEINKAL 102
            +++ A 
Sbjct: 317 AKVDNAF 323



 Score = 38.1 bits (87), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           VC +S NR  +V+ ++ +  VD+ E + K G ++  KKGI L+  +W  L   ++E+ KA
Sbjct: 192 VCALSNNRFCTVKTYKDESVVDLHESFEK-GGEWIRKKGIRLTRGEWAALCAAMDEVTKA 250


>gi|325186841|emb|CCA21386.1| AlNc14C121G6666 [Albugo laibachii Nc14]
          Length = 99

 Score = 40.8 bits (94), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 15 SDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKK 74
          S+ S  G A  +  S  + S + D+            +++ ++ +V ++IRE Y ++G  
Sbjct: 15 SEESTRGPACKRSDSNAEPSQEQDEYSF------SLCAIQTFESEVLMNIRECYEQDGYW 68

Query: 75 FPGKKGISLSVDQWNTLRDHV 95
           PGK+GIS S D+W  L   +
Sbjct: 69 KPGKEGISFSTDRWKKLEHQI 89


>gi|302847202|ref|XP_002955136.1| hypothetical protein VOLCADRAFT_121383 [Volvox carteri f.
           nagariensis]
 gi|300259664|gb|EFJ43890.1| hypothetical protein VOLCADRAFT_121383 [Volvox carteri f.
           nagariensis]
          Length = 381

 Score = 40.8 bits (94), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 39/61 (63%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           C++S+ R  ++  ++G  ++ +RE+Y K+G+  P KKG++LS+ +   L     +I+ A+
Sbjct: 172 CQLSRTRLAAISEFRGSCYLGLREYYEKDGQLHPSKKGVNLSLAEAEALLAAAPDISVAV 231

Query: 103 G 103
           G
Sbjct: 232 G 232



 Score = 36.6 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 39  DIVVC-EISKNRRVSVRNWQGKVWVDIREFYVKEGKKF-PGKKGISLSVDQW 88
           D+  C ++S  RRVS+  ++G  +V +RE+Y K G    P  KG++L+  QW
Sbjct: 309 DLAYCLKLSGMRRVSLSEFKGVTYVGVREYYDKGGGDLAPSAKGLNLNQAQW 360



 Score = 36.2 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 23/33 (69%)

Query: 70  KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           K G+  PGKKGI+LS   W TL+ H+  +++AL
Sbjct: 273 KNGELLPGKKGIALSPADWGTLQQHMGAVDEAL 305


>gi|330792187|ref|XP_003284171.1| hypothetical protein DICPUDRAFT_27270 [Dictyostelium purpureum]
 gi|325085868|gb|EGC39267.1| hypothetical protein DICPUDRAFT_27270 [Dictyostelium purpureum]
          Length = 137

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 43  CEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKF-PGKKGISLSVDQWNTLRDHVEEI 98
            ++   R++    + G   +DIREFY  K  K+  PG KGISL+ +Q+  + D+++ I
Sbjct: 75  IDLGNKRKIQFSTFGGSSKIDIREFYEDKNSKELKPGTKGISLTFEQFQIIADNIDTI 132


>gi|281202403|gb|EFA76606.1| hypothetical protein PPL_09911 [Polysphondylium pallidum PN500]
          Length = 370

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
           + ++  NR+VS   +     +DIREFY K+G+  PGKK 
Sbjct: 102 IVDLGNNRKVSYSTFTKDPRIDIREFYTKDGESLPGKKA 140


>gi|405961838|gb|EKC27582.1| Tripartite motif-containing protein 2 [Crassostrea gigas]
          Length = 800

 Score = 40.0 bits (92), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 41  VVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFP-GKKGISLSVDQWNTLRDHVEEI 98
           ++  +S  RRVSV   Q +V+VDIRE+   E + F    KG++L+  QW  LR+ +  I
Sbjct: 735 ILFSLSWKRRVSVYQHQEEVFVDIREY--SEDRTFQRSTKGVALTKPQWTKLREEMPNI 791


>gi|149236932|ref|XP_001524343.1| hypothetical protein LELG_04314 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451878|gb|EDK46134.1| hypothetical protein LELG_04314 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 128

 Score = 39.7 bits (91), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 49  RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL----- 102
           +RV+VR ++    VDIRE++   +GK+ P +KGISL+ D +  L     +I  AL     
Sbjct: 22  KRVTVRRFKNINLVDIREYWTDAKGKRNPSQKGISLTEDTYIELIKAHNKIQNALDKLNS 81

Query: 103 GDN 105
           GDN
Sbjct: 82  GDN 84


>gi|291388825|ref|XP_002710955.1| PREDICTED: RNA polymerase II transcriptional coactivator-like
           [Oryctolagus cuniculus]
          Length = 126

 Score = 39.3 bits (90), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 49  RRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R + V+ ++GKV  DI E++V  EG+   G+ G+SL    W+ L++ V   + A+
Sbjct: 69  RSIGVQGFKGKVLADIPEYWVDPEGEMKAGRNGVSLKPKLWSQLKEQVSNTDAAM 123


>gi|405972228|gb|EKC37007.1| hypothetical protein CGI_10025991 [Crassostrea gigas]
          Length = 167

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 28/41 (68%)

Query: 62  VDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           VDIRE+   E ++FP KKGISL++  + TL   ++ I+ AL
Sbjct: 28  VDIREWKSSENRQFPTKKGISLNLQLFKTLTLSIDLIDTAL 68


>gi|403353035|gb|EJY76050.1| Putative RNA polymerase II transcriptional coactivator [Oxytricha
           trifallax]
          Length = 220

 Score = 38.9 bits (89), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 41/67 (61%)

Query: 36  DSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHV 95
           D +   + E++  ++V V+ ++G   VDIRE Y K G+    +KG+SL+++ +  L+D +
Sbjct: 150 DKEGSAIFELNNKKKVVVKKYKGMTLVDIRETYEKNGETLFTQKGVSLTLEMFEKLKDML 209

Query: 96  EEINKAL 102
             I++ L
Sbjct: 210 PSIDQEL 216


>gi|440295186|gb|ELP88099.1| hypothetical protein EIN_222520 [Entamoeba invadens IP1]
          Length = 192

 Score = 38.9 bits (89), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 24  PPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISL 83
           PP   S+T S +D    V+  I +N  +S     G++ VDIRE+    G+  P  KGI L
Sbjct: 113 PP--LSETKSVNDK---VLIRIGENVFISKSEVNGEMCVDIREYNNICGRLNPTDKGILL 167

Query: 84  SVDQWNTLRDHVEEINKAL 102
            + +WNT+   V  + K L
Sbjct: 168 GMKEWNTIMKSVPFLTKWL 186


>gi|1109662|gb|AAC46989.1| p31A [Drosophila melanogaster]
 gi|1586828|prf||2204395A transrepressor
          Length = 98

 Score = 37.7 bits (86), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)

Query: 49 RRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
          R+V +  ++G+  VDIREFY K G+  PGKKG
Sbjct: 55 RQVRINEFRGRKSVDIREFYDKGGQILPGKKG 86


>gi|392356027|ref|XP_003752192.1| PREDICTED: LOW QUALITY PROTEIN: activated RNA polymerase II
           transcriptional coactivator p15-like [Rattus norvegicus]
          Length = 150

 Score = 37.7 bits (86), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 10/67 (14%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVD 86
           AS   SS   DD    +I K R VSV +++GK+ +DIRE+++  EG+  PG+K       
Sbjct: 85  ASSKQSSHSRDDNTF-QIGKLRYVSVEDFKGKLLIDIREYWMDSEGEMKPGRK------- 136

Query: 87  QWNTLRD 93
            W+ L+D
Sbjct: 137 -WSQLKD 142


>gi|328872589|gb|EGG20956.1| ssDNA-binding transcriptional regulator [Dictyostelium
           fasciculatum]
          Length = 164

 Score = 37.7 bits (86), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 6/67 (8%)

Query: 35  DDSDDIVVCEISKNRRVSVRNWQGKV-WVDIREFYV-KEGKKFPGKKGISLSVDQWNTLR 92
           D++D  ++ ++    +V+ R+  G V  VD+R  Y  KEG   P +KGIS S+++WN ++
Sbjct: 38  DNADKFMISKL----KVASRSVFGGVNRVDLRTVYENKEGAIAPTQKGISFSLEEWNLVK 93

Query: 93  DHVEEIN 99
            ++  I+
Sbjct: 94  QNIALID 100


>gi|405954174|gb|EKC21688.1| hypothetical protein CGI_10003497 [Crassostrea gigas]
          Length = 141

 Score = 37.7 bits (86), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 44  EISKNRRVSVRNW-QGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           E+   R + V     G+  VDIRE+   E ++FP KKGISL++  + TL   ++ I+  L
Sbjct: 9   ELGNERYIQVCTLDNGERIVDIREWKSSENRQFPTKKGISLNLQLFKTLTLSIDLIDTDL 68

Query: 103 G 103
            
Sbjct: 69  A 69


>gi|390360809|ref|XP_001179446.2| PREDICTED: uncharacterized protein LOC752530 [Strongylocentrotus
           purpuratus]
          Length = 175

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEG--KKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           R   V+ ++G  +V+IRE+Y  +G  +  PG+KGI+L+ + W  L     EI+ A+ D S
Sbjct: 112 RFAVVKKFRGVPYVNIREYYNTKGTNRMLPGQKGINLTGENWWKLVKAKFEISDAVRDLS 171


>gi|405958400|gb|EKC24530.1| hypothetical protein CGI_10019912 [Crassostrea gigas]
          Length = 134

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 62  VDIREFYVK--EGKKFPGKKGISLSVDQWNTLRDHVEEINKALGDN 105
           V+IR++++    G+  P KKG +++ DQW TL++ + E+ K +GD 
Sbjct: 85  VNIRKWWMPPGNGEIVPTKKGAAITFDQWETLKELMSEVGKKIGDQ 130


>gi|405959271|gb|EKC25324.1| hypothetical protein CGI_10015603 [Crassostrea gigas]
          Length = 188

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 2/45 (4%)

Query: 62  VDIREFYVKEG--KKFPGKKGISLSVDQWNTLRDHVEEINKALGD 104
           V+IR++++  G  +  P KKG +++ DQW TL++ + E+ K +GD
Sbjct: 110 VNIRKWWMPPGNDEIVPTKKGAAITFDQWKTLKELMPEVEKKIGD 154


>gi|115757331|ref|XP_001185847.1| PREDICTED: uncharacterized protein LOC754487 [Strongylocentrotus
           purpuratus]
          Length = 175

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEG--KKFPGKKGISLSVDQWNTLRDHVEEINKALGDNS 106
           R   V+ ++G  +V+IRE+Y  +G  +  PG+KGI+L+ + W  L     EI+ A+ D S
Sbjct: 112 RFAVVKKFRGVPYVNIREYYNTKGTNRMLPGQKGINLTGENWWKLVKAKFEISDAVRDLS 171


>gi|221219488|gb|ACM08405.1| Activated RNA polymerase II transcriptional coactivator p15 [Salmo
           salar]
          Length = 170

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 25  PKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKK 79
           P     + ++D   +  + +I + R VSVR ++GK  VDIRE+++ ++G+  PGKK
Sbjct: 51  PGAGGSSKAADSKTEDGMFQIGRMRYVSVREFKGKCLVDIREYWMNQDGEMKPGKK 106


>gi|440474684|gb|ELQ43412.1| hypothetical protein OOU_Y34scaffold00153g6 [Magnaporthe oryzae
          Y34]
          Length = 154

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 6  KRKEEEEYDSDGSVDGHAP-PKKASKTDSSD------DSDDIVVCEISKNRRVSVRNWQG 58
          KR  +EE  S GS     P P K +K+ +S+      D++     EIS  RRV +  ++ 
Sbjct: 9  KRARDEEAQSGGSEAETKPAPVKKAKSKASNPGGSQVDAEGNPFWEISDKRRVGISQFKK 68

Query: 59 KVWVDIREFYVKEGKKFPGKK 79
            +++IRE+Y   G+  PGKK
Sbjct: 69 MDFINIREYYEAGGEMKPGKK 89


>gi|66820016|ref|XP_643662.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
           AX4]
 gi|60471778|gb|EAL69733.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
           AX4]
          Length = 141

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           +S  R++S  N++G   +DIREF+  K G+  P  KGISL+ +Q+  + ++ + I
Sbjct: 79  LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQFMVILENGDTI 133


>gi|392343496|ref|XP_003754901.1| PREDICTED: LOW QUALITY PROTEIN: activated RNA polymerase II
           transcriptional coactivator p15-like [Rattus norvegicus]
          Length = 139

 Score = 37.4 bits (85), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 28  ASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKK 79
           AS   SS   DD    +I K R VSV +++GK+ +DIRE+++  EG+  PG+K
Sbjct: 85  ASSKQSSHSRDDNTF-QIGKLRYVSVEDFKGKLLIDIREYWMDSEGEMKPGRK 136


>gi|72034836|ref|XP_799259.1| PREDICTED: uncharacterized protein LOC594736 [Strongylocentrotus
           purpuratus]
 gi|390346761|ref|XP_003726618.1| PREDICTED: uncharacterized protein LOC100887956 [Strongylocentrotus
           purpuratus]
          Length = 187

 Score = 37.4 bits (85), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)

Query: 49  RRVSVRNWQGKVWVDIREFYVKEGKK------FPGKKGISLSVDQWNTLRDHVEEINKAL 102
           R   V+N++G  ++ IRE+Y  +  K       PG +GI+L+ D W  +   +  I+ A+
Sbjct: 119 RYAVVKNYRGVTYIAIREYYKDKKSKNTPDRMLPGIRGINLTADNWWQMTKSIMSISDAV 178


>gi|294885367|ref|XP_002771295.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239874791|gb|EER03111.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 265

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           V  ++ + +V  + W+G V++DIR+++  EG+K P +KG+ L+V+++       E +  A
Sbjct: 108 VWRVTDDVKVKAKLWKGMVFMDIRKYF-DEGRK-PTQKGVFLNVEKYEKTMARQEMVTAA 165

Query: 102 L 102
           L
Sbjct: 166 L 166


>gi|294896360|ref|XP_002775518.1| hypothetical protein Pmar_PMAR020499 [Perkinsus marinus ATCC 50983]
 gi|239881741|gb|EER07334.1| hypothetical protein Pmar_PMAR020499 [Perkinsus marinus ATCC 50983]
          Length = 631

 Score = 36.2 bits (82), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 42  VCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEINKA 101
           V  ++ + +V  + W+G V++DIR+++  EG+K P +KG+ L+V+++       E +  A
Sbjct: 107 VWRVTDDVKVKAKLWKGMVFMDIRKYF-DEGRK-PTQKGVFLNVEKYEKTMARQEMVTAA 164

Query: 102 L 102
           L
Sbjct: 165 L 165


>gi|390567589|ref|ZP_10247917.1| hypothetical protein WQE_04862 [Burkholderia terrae BS001]
 gi|389940490|gb|EIN02291.1| hypothetical protein WQE_04862 [Burkholderia terrae BS001]
          Length = 86

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 30/43 (69%), Gaps = 1/43 (2%)

Query: 46 SKNRRVSVRNWQGKVWVDIREFYVKEGKKF-PGKKGISLSVDQ 87
          S+  R+++ +++G+ ++D+R +Y  E  ++ PG+ G+SL  DQ
Sbjct: 23 SERLRINISDYRGRTFIDLRVWYSTEAGEYKPGRAGVSLRPDQ 65


>gi|170572036|ref|XP_001891960.1| RNA polymerase II transcriptional coactivator [Brugia malayi]
 gi|158603219|gb|EDP39232.1| RNA polymerase II transcriptional coactivator, putative [Brugia
          malayi]
          Length = 85

 Score = 35.8 bits (81), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 11 EEYDSDGSVDGHAPPKKA-SKTDSSDDSDDIVVCEISKNRRVSVRNWQGKVWVDIREFY 68
          E   SD S+    P KK  +   S  ++D   + E+ K R V+VR+++GK  +DIRE+Y
Sbjct: 24 ENSTSDESIIDKNPVKKGRTNGGSFKNADGDEMFELGKMRFVTVRSFKGKSLIDIREYY 82


>gi|238493929|ref|XP_002378201.1| PX domain protein [Aspergillus flavus NRRL3357]
 gi|220696695|gb|EED53037.1| PX domain protein [Aspergillus flavus NRRL3357]
          Length = 926

 Score = 35.4 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 4/45 (8%)

Query: 64  IREFYVKEGKKFPGKK----GISLSVDQWNTLRDHVEEINKALGD 104
           +RE+Y K+G++ PGKK    GISL +DQ+ +L   + +I   L D
Sbjct: 828 LREYYEKDGQELPGKKVGPSGISLPIDQFASLVTLLPDIELTLKD 872


>gi|403369594|gb|EJY84646.1| hypothetical protein OXYTRI_17507 [Oxytricha trifallax]
          Length = 407

 Score = 35.4 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 41  VVCEISKNRRVSVRNW--QGKVWVDIREFYVKEGKKFPGKKGISLSVDQWNTLRDHVEEI 98
           VV E+S N+ V +  W  +G   +  R +   + K FP K+G++L+ +QW       E+I
Sbjct: 329 VVYELSANKMVKMGIWAQKGIFMIHFRGYQKDQSKHFPEKEGLALTGEQWRKFCKFYEQI 388

Query: 99  N 99
           N
Sbjct: 389 N 389


>gi|115352454|ref|YP_774293.1| hypothetical protein Bamb_2403 [Burkholderia ambifaria AMMD]
 gi|115282442|gb|ABI87959.1| hypothetical protein Bamb_2403 [Burkholderia ambifaria AMMD]
          Length = 106

 Score = 35.4 bits (80), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 46 SKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGISLSVDQ 87
          S+  RV+V  ++G+V VD+R ++  E G+  PG+ G+SL  DQ
Sbjct: 43 SERLRVTVSEYRGRVLVDLRIWFAAEHGEWKPGRAGVSLRPDQ 85


>gi|300120308|emb|CBK19862.2| Transcriptional coactivator p15 [Blastocystis hominis]
          Length = 107

 Score = 35.4 bits (80), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVK--EGKKFPGKKGISLSVDQWNTLRDHVEEINKAL 102
           IS  + V+V  ++G+  V+IRE YVK  +G+  P KKGI L+ + +N L    E+I   +
Sbjct: 40  ISSRKAVTVNEFRGEPSVNIRE-YVKLDDGRTAPTKKGIFLTEENYNALMKCEEQIKTMI 98


>gi|260835524|ref|XP_002612758.1| hypothetical protein BRAFLDRAFT_128266 [Branchiostoma floridae]
 gi|229298138|gb|EEN68767.1| hypothetical protein BRAFLDRAFT_128266 [Branchiostoma floridae]
          Length = 378

 Score = 35.0 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYVKEGKKF---PGKKGISLSVDQWNTLRD 93
           I  N  +S   +  +  + +R+FY  +       PGK+G+S++ DQWN L++
Sbjct: 212 IHDNVFISCTVFNSRPLISVRQFYTTKDDPTTLKPGKRGLSMTPDQWNKLKE 263


>gi|164663105|ref|XP_001732674.1| hypothetical protein MGL_0449 [Malassezia globosa CBS 7966]
 gi|159106577|gb|EDP45460.1| hypothetical protein MGL_0449 [Malassezia globosa CBS 7966]
          Length = 883

 Score = 35.0 bits (79), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 8   KEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVS 52
           K+EE Y +D   +  APP  AS  D+SDD+ D     +++ R+ +
Sbjct: 788 KDEESYFADEPENETAPPVGASSVDASDDAKDRTFPSLARRRKAA 832


>gi|66826299|ref|XP_646504.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
           AX4]
 gi|60474440|gb|EAL72377.1| ssDNA-binding transcriptional regulator [Dictyostelium discoideum
           AX4]
          Length = 129

 Score = 34.7 bits (78), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 8/61 (13%)

Query: 45  ISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGISLSVDQW-------NTLRDHVE 96
           +S  R++S  N++G   +DIREF+  K G+  P  KGISL+ +Q        +T++D ++
Sbjct: 67  LSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIK 126

Query: 97  E 97
           E
Sbjct: 127 E 127


>gi|295798088|emb|CAX68908.1| ssDNA-binding transcriptional regulator, transcriptional
           coactivator p15 [uncultured bacterium]
          Length = 77

 Score = 34.7 bits (78), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 50  RVSVRNWQGKVWVDIREFYVKEG--KKFPGKKGISLSVDQWNTLRDHVEEINKALGDN 105
           RV +R ++G   +DIR + + +G  +  P  KG++++V     L+  +EE  K L +N
Sbjct: 17  RVGIREFKGNDLIDIRTWTMTQGSNEMVPTAKGVTINVHLLQELKKALEEAEKILKEN 74


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.308    0.130    0.380 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,848,092,289
Number of Sequences: 23463169
Number of extensions: 67818081
Number of successful extensions: 289654
Number of sequences better than 100.0: 449
Number of HSP's better than 100.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 289001
Number of HSP's gapped (non-prelim): 558
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)