Query 033987
Match_columns 106
No_of_seqs 100 out of 211
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 14:18:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 98.9 4E-09 1.4E-13 77.3 6.3 54 49-102 88-143 (195)
2 1u8s_A Glycine cleavage system 98.7 4.5E-08 1.5E-12 70.6 7.2 55 48-102 87-145 (192)
3 2ko1_A CTR148A, GTP pyrophosph 98.2 6.7E-06 2.3E-10 51.3 7.0 48 53-100 4-51 (88)
4 1zpv_A ACT domain protein; str 98.1 1E-05 3.4E-10 51.3 6.8 41 54-94 5-45 (91)
5 1u8s_A Glycine cleavage system 98.0 1.8E-05 6.3E-10 56.8 7.5 49 54-102 6-54 (192)
6 2nyi_A Unknown protein; protei 97.8 7.8E-05 2.7E-09 54.4 7.8 48 54-101 5-52 (195)
7 2jhe_A Transcription regulator 97.7 5.1E-05 1.7E-09 51.5 5.0 36 57-92 3-38 (190)
8 3p96_A Phosphoserine phosphata 96.6 0.004 1.4E-07 48.8 6.0 42 53-94 11-52 (415)
9 3n0v_A Formyltetrahydrofolate 96.3 0.0061 2.1E-07 47.8 5.4 45 54-100 8-52 (286)
10 3obi_A Formyltetrahydrofolate 96.2 0.0077 2.6E-07 47.3 5.9 38 53-90 5-42 (288)
11 3lou_A Formyltetrahydrofolate 96.2 0.0076 2.6E-07 47.4 5.8 38 53-90 9-46 (292)
12 2f1f_A Acetolactate synthase i 96.1 0.0097 3.3E-07 43.5 5.6 36 56-91 5-40 (164)
13 3nrb_A Formyltetrahydrofolate 96.1 0.0099 3.4E-07 46.6 5.9 46 53-100 6-51 (287)
14 3o1l_A Formyltetrahydrofolate 95.9 0.012 4E-07 46.7 5.7 36 55-90 23-58 (302)
15 1y7p_A Hypothetical protein AF 95.7 0.013 4.4E-07 45.7 4.9 37 55-91 5-41 (223)
16 2pc6_A Probable acetolactate s 95.6 0.019 6.5E-07 42.1 5.2 34 56-89 6-39 (165)
17 2f06_A Conserved hypothetical 95.5 0.047 1.6E-06 37.1 6.5 46 55-100 73-118 (144)
18 2f06_A Conserved hypothetical 95.0 0.082 2.8E-06 35.8 6.6 35 55-89 7-41 (144)
19 2fgc_A Acetolactate synthase, 93.8 0.24 8.2E-06 37.5 7.4 37 55-91 30-67 (193)
20 1sc6_A PGDH, D-3-phosphoglycer 92.0 0.45 1.6E-05 38.5 7.1 44 57-100 334-377 (404)
21 2re1_A Aspartokinase, alpha an 88.5 0.39 1.3E-05 33.7 3.5 41 43-87 18-59 (167)
22 2qmw_A PDT, prephenate dehydra 87.8 0.6 2.1E-05 36.3 4.4 47 52-100 184-236 (267)
23 2qmx_A Prephenate dehydratase; 87.5 0.58 2E-05 36.7 4.2 46 53-100 199-247 (283)
24 2re1_A Aspartokinase, alpha an 87.0 1 3.5E-05 31.5 4.8 36 52-89 101-139 (167)
25 3mwb_A Prephenate dehydratase; 85.5 0.96 3.3E-05 36.0 4.5 46 53-100 200-249 (313)
26 2dt9_A Aspartokinase; protein- 84.9 0.65 2.2E-05 32.4 2.9 35 52-86 14-49 (167)
27 3luy_A Probable chorismate mut 83.5 1.3 4.5E-05 35.4 4.5 37 62-100 216-255 (329)
28 3k5p_A D-3-phosphoglycerate de 83.1 3.3 0.00011 34.0 6.9 55 38-94 329-383 (416)
29 3p96_A Phosphoserine phosphata 83.0 6.7 0.00023 30.3 8.3 39 52-90 99-138 (415)
30 2dtj_A Aspartokinase; protein- 82.9 1.1 3.8E-05 31.8 3.5 38 52-89 13-51 (178)
31 3mtj_A Homoserine dehydrogenas 81.9 1.3 4.3E-05 36.6 3.9 49 54-102 359-409 (444)
32 2dtj_A Aspartokinase; protein- 81.1 1.5 5.1E-05 31.1 3.7 38 43-84 88-128 (178)
33 1ygy_A PGDH, D-3-phosphoglycer 81.1 4.3 0.00015 33.5 6.9 49 50-98 450-500 (529)
34 2dt9_A Aspartokinase; protein- 79.1 2 7E-05 29.8 3.8 33 52-84 93-128 (167)
35 1phz_A Protein (phenylalanine 73.4 1.7 5.7E-05 36.5 2.3 49 50-100 30-81 (429)
36 4go7_X Aspartokinase; transfer 61.4 6.4 0.00022 29.2 3.2 33 53-85 34-67 (200)
37 3s1t_A Aspartokinase; ACT doma 58.0 12 0.0004 26.7 4.0 40 43-86 89-131 (181)
38 3s1t_A Aspartokinase; ACT doma 52.4 13 0.00045 26.5 3.5 33 53-85 15-48 (181)
39 3ab4_A Aspartokinase; aspartat 49.4 15 0.00052 29.3 3.7 37 52-88 262-299 (421)
40 3mah_A Aspartokinase; aspartat 48.8 10 0.00035 26.0 2.3 34 52-85 16-52 (157)
41 3kol_A Oxidoreductase, glyoxal 47.4 41 0.0014 20.8 4.9 35 67-104 108-142 (156)
42 3rri_A Glyoxalase/bleomycin re 43.3 56 0.0019 20.0 5.7 39 66-104 79-119 (135)
43 3c1m_A Probable aspartokinase; 38.9 22 0.00075 29.0 3.2 41 43-87 311-354 (473)
44 3ab4_A Aspartokinase; aspartat 38.5 32 0.0011 27.4 4.0 38 43-84 337-377 (421)
45 3zw5_A Glyoxalase domain-conta 37.3 44 0.0015 21.3 3.9 38 67-104 100-138 (147)
46 3ey7_A Biphenyl-2,3-DIOL 1,2-d 35.5 53 0.0018 19.7 3.9 37 68-104 84-121 (133)
47 3r6a_A Uncharacterized protein 35.2 91 0.0031 20.2 5.3 34 68-104 76-109 (144)
48 3hdp_A Glyoxalase-I; glutathio 32.5 85 0.0029 19.0 5.1 37 68-104 88-124 (133)
49 4esb_A Transcriptional regulat 29.5 1E+02 0.0035 20.1 4.8 39 64-103 41-79 (115)
50 3g12_A Putative lactoylglutath 28.6 1.1E+02 0.0038 19.1 7.1 45 53-104 66-111 (128)
51 3tvi_A Aspartokinase; structur 28.2 39 0.0014 27.6 3.0 33 52-84 296-331 (446)
52 4g6x_A Glyoxalase/bleomycin re 27.0 1.3E+02 0.0043 19.3 4.9 34 68-104 109-142 (155)
53 3huh_A Virulence protein STM31 26.9 77 0.0026 19.9 3.7 37 68-104 97-134 (152)
54 3c1m_A Probable aspartokinase; 26.9 61 0.0021 26.3 3.9 32 52-83 402-436 (473)
55 1lfd_A Ralgds; RAL, effector i 26.5 74 0.0025 21.3 3.6 37 43-81 7-43 (87)
56 2cdq_A Aspartokinase; aspartat 26.0 56 0.0019 27.2 3.6 34 52-85 339-375 (510)
57 3ghj_A Putative integron gene 25.9 82 0.0028 19.9 3.8 36 67-104 97-132 (141)
58 4ehi_A Bifunctional purine bio 25.3 71 0.0024 27.5 4.2 27 54-83 26-52 (534)
59 3zzm_A Bifunctional purine bio 25.0 1.1E+02 0.0038 26.3 5.3 26 55-83 13-38 (523)
60 3hhh_A Transcriptional regulat 24.9 1.3E+02 0.0043 19.7 4.6 39 64-103 45-83 (116)
61 3l76_A Aspartokinase; alloster 23.6 54 0.0018 27.7 3.1 39 43-85 437-476 (600)
62 1zvp_A Hypothetical protein VC 23.0 1E+02 0.0034 21.4 4.0 39 50-90 67-108 (133)
63 2yvq_A Carbamoyl-phosphate syn 22.4 53 0.0018 22.4 2.4 28 55-83 27-54 (143)
64 3elk_A Putative transcriptiona 22.1 1.5E+02 0.0051 19.3 4.6 38 65-103 47-84 (117)
65 2i7r_A Conserved domain protei 21.9 1.3E+02 0.0046 17.8 4.2 42 57-104 67-108 (118)
66 2pjs_A AGR_C_3564P, uncharacte 21.8 1.2E+02 0.004 18.0 3.7 35 68-104 75-109 (119)
67 2a4x_A Mitomycin-binding prote 21.3 1.5E+02 0.0052 18.2 5.7 36 67-104 84-119 (138)
68 2jys_A Protease/reverse transc 21.1 58 0.002 22.6 2.3 28 74-101 35-63 (107)
69 3zi1_A Glyoxalase domain-conta 20.6 2.3E+02 0.0078 21.1 5.8 37 68-104 233-271 (330)
70 1wj5_A Hypothetical protein (r 20.5 35 0.0012 24.2 1.1 34 65-104 77-110 (120)
71 2rbb_A Glyoxalase/bleomycin re 20.3 1.6E+02 0.0056 18.1 5.7 36 67-104 88-123 (141)
72 4esf_A PADR-like transcription 20.1 1.4E+02 0.0046 19.6 4.0 39 64-103 43-81 (117)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.86 E-value=4e-09 Score=77.33 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=49.9
Q ss_pred CCCCCcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecC--CceeEEEEEee
Q 033987 49 DSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS--SGKHNKFAITK 102 (106)
Q Consensus 49 ~ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~G--er~~DvFYVTD 102 (106)
+.+...++|+|.+.||||++++|+++|+++|+||..++..|.+ ++..|.||++.
T Consensus 88 ~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~ 143 (195)
T 2nyi_A 88 SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGS 143 (195)
T ss_dssp CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEE
T ss_pred CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEE
Confidence 4456779999999999999999999999999999999999999 88999999964
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.69 E-value=4.5e-08 Score=70.61 Aligned_cols=55 Identities=15% Similarity=0.132 Sum_probs=46.8
Q ss_pred CCCCCCcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCC----ceeEEEEEee
Q 033987 48 LDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSS----GKHNKFAITK 102 (106)
Q Consensus 48 N~ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ge----r~~DvFYVTD 102 (106)
++.+...++|+|.+.||||+|++|++.|++.|+||..++..|+++ +..|.||++.
T Consensus 87 ~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~ 145 (192)
T 1u8s_A 87 HQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAI 145 (192)
T ss_dssp CCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEE
T ss_pred CccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEE
Confidence 345567899999999999999999999999999999999999995 6899999964
No 3
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.18 E-value=6.7e-06 Score=51.27 Aligned_cols=48 Identities=10% Similarity=0.000 Sum_probs=40.6
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEE
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 100 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYV 100 (106)
..+.+.|...||||+|.+|+++|++.|++|....+.+.++.+..+|-+
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v 51 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMI 51 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEE
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEE
Confidence 456789999999999999999999999999999998876655555543
No 4
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.11 E-value=1e-05 Score=51.32 Aligned_cols=41 Identities=17% Similarity=0.200 Sum_probs=36.4
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCce
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGK 94 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~ 94 (106)
...+.|.+.||||+|.+|+++|++.|.||......+.++.+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~ 45 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYF 45 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEE
Confidence 46799999999999999999999999999999888766433
No 5
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.02 E-value=1.8e-05 Score=56.84 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=43.3
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEee
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITK 102 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD 102 (106)
..+|.|.+.||||+++.|+++|++.|+||..+.+.+.++++.=.|.|..
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~ 54 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISG 54 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEec
Confidence 4689999999999999999999999999999999988777766777643
No 6
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=97.81 E-value=7.8e-05 Score=54.37 Aligned_cols=48 Identities=23% Similarity=0.216 Sum_probs=42.0
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEe
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAIT 101 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVT 101 (106)
..+|-|.+.|||||.+.|+.+|.++|+||..|++.+.++++.=.|.|.
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~ 52 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVS 52 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEE
Confidence 468999999999999999999999999999999998777654377764
No 7
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=97.70 E-value=5.1e-05 Score=51.47 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=33.7
Q ss_pred EEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCC
Q 033987 57 VEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSS 92 (106)
Q Consensus 57 VEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ge 92 (106)
|+|.+.||+|||.+|+++|.+.|++|....+.+.|.
T Consensus 3 ~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~ 38 (190)
T 2jhe_A 3 LEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR 38 (190)
T ss_dssp EEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE
T ss_pred EEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE
Confidence 789999999999999999999999999999988753
No 8
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.57 E-value=0.004 Score=48.76 Aligned_cols=42 Identities=12% Similarity=0.167 Sum_probs=37.6
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCce
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGK 94 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~ 94 (106)
..-+|.|.+.||||+.+.|++.|++.|.||....-...++++
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f 52 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRL 52 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEe
Confidence 456899999999999999999999999999999888777654
No 9
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.26 E-value=0.0061 Score=47.80 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=36.9
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEE
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 100 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYV 100 (106)
.-++.|.+.||||+.+.|++.|++.|+||....-.++. ..+.|+.
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~--~~g~Ffm 52 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDR--QSGRFFI 52 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET--TTTEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccC--CCCeeEE
Confidence 36899999999999999999999999999988777543 2344554
No 10
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.24 E-value=0.0077 Score=47.27 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=33.7
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEec
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 90 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~ 90 (106)
..-++.|.+.||||+.+.|++.|++.|+||....-.++
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d 42 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYND 42 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeec
Confidence 34689999999999999999999999999998877543
No 11
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.23 E-value=0.0076 Score=47.43 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=34.1
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEec
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 90 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~ 90 (106)
..-++.|.+.||||+.+.|++.|++.|+||....-.++
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d 46 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDD 46 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEec
Confidence 34689999999999999999999999999998887754
No 12
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.15 E-value=0.0097 Score=43.55 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=32.5
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecC
Q 033987 56 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS 91 (106)
Q Consensus 56 VVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~G 91 (106)
.++|...||||+|.+|+++|++.|.||.+..+....
T Consensus 5 ~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~ 40 (164)
T 2f1f_A 5 ILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTD 40 (164)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECS
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecC
Confidence 578999999999999999999999999998887533
No 13
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.10 E-value=0.0099 Score=46.61 Aligned_cols=46 Identities=26% Similarity=0.395 Sum_probs=36.9
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEE
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 100 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYV 100 (106)
..-++.|.+.||||+.+.|++.|++.|+||....-.++. ..+.|+.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~--~~g~Ffm 51 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDE--DSSKFFM 51 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET--TTTEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecC--CCCeEEE
Confidence 346899999999999999999999999999988775432 2334554
No 14
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=95.95 E-value=0.012 Score=46.69 Aligned_cols=36 Identities=22% Similarity=0.176 Sum_probs=33.3
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEec
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD 90 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~ 90 (106)
-++.|.+.||||+.+.|++.|++.|+||....-.++
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d 58 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSD 58 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEec
Confidence 589999999999999999999999999999887765
No 15
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.72 E-value=0.013 Score=45.66 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=30.0
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecC
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDS 91 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~G 91 (106)
.-++|...||+|+|.+|+++|++.+.||...+..+..
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 3478999999999999999999999999999999864
No 16
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=95.60 E-value=0.019 Score=42.14 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=31.5
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEe
Q 033987 56 IVEITFGDRLGALLDTMNALKNLGLNVVKANVFL 89 (106)
Q Consensus 56 VVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT 89 (106)
.+.|...||||+|.+|++.|++.|.||.+..+..
T Consensus 6 ~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~ 39 (165)
T 2pc6_A 6 IISLLMENEAGALSRVAGLFSARGYNIESLSVAP 39 (165)
T ss_dssp EEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEE
T ss_pred EEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEe
Confidence 5789999999999999999999999999988864
No 17
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.47 E-value=0.047 Score=37.05 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=34.8
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEE
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 100 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYV 100 (106)
.++-|.-.|+||.|.++.++|.+.|+||........+.+..=+|-+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 5788888999999999999999999999776655233444334433
No 18
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.03 E-value=0.082 Score=35.83 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.5
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEe
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL 89 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT 89 (106)
-.+.|.-.||||.|.++.+.|++.|+||..-.+..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~ 41 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE 41 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe
Confidence 35677889999999999999999999999877754
No 19
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=93.81 E-value=0.24 Score=37.46 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=32.3
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEE-ecC
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVVKANVF-LDS 91 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~Is-T~G 91 (106)
-.+.|...||||.|.+|++.|++.|.||.+=.+. |+.
T Consensus 30 ~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted 67 (193)
T 2fgc_A 30 HLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESET 67 (193)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSS
T ss_pred EEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCC
Confidence 4688999999999999999999999999987775 443
No 20
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.99 E-value=0.45 Score=38.48 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=38.1
Q ss_pred EEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEE
Q 033987 57 VEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAI 100 (106)
Q Consensus 57 VEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYV 100 (106)
+-+.-.||||.|..|+++|.+.|+||..-++.+.|+.+.=+.-|
T Consensus 334 l~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidv 377 (404)
T 1sc6_A 334 LMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI 377 (404)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEc
Confidence 44778899999999999999999999999999988877655544
No 21
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=88.53 E-value=0.39 Score=33.66 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=33.0
Q ss_pred EEEEeCCCCCCcEEEEEEe-CCcccHHHHHHHHHHhCCcEEEEEEE
Q 033987 43 KVIIDLDSDPDATIVEITF-GDRLGALLDTMNALKNLGLNVVKANV 87 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a-~DRpGLL~di~~aL~dLgL~I~~A~I 87 (106)
-|..++ +.+.|.|.. .|+||.|.++.++|.+.|++|..-..
T Consensus 18 gIa~~~----~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~ 59 (167)
T 2re1_A 18 GIAFDK----NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQ 59 (167)
T ss_dssp EEEEEC----CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEE
T ss_pred EEEecC----CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEc
Confidence 455543 557888885 89999999999999999999986544
No 22
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=87.82 E-value=0.6 Score=36.35 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=35.7
Q ss_pred CCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEEEEEEe---cCCceeEEEEE
Q 033987 52 PDATIVEITF---GDRLGALLDTMNALKNLGLNVVKANVFL---DSSGKHNKFAI 100 (106)
Q Consensus 52 ~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~A~IsT---~Ger~~DvFYV 100 (106)
...|-+-+.- .|+||.|+++.+.|++.|+|+.+ |.+ .+....=.|||
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~Ffi 236 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSW--IESRPLKTQLGMYRFFV 236 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTCEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeE--EEEeecCCCCccEEEEE
Confidence 3456666666 89999999999999999999875 443 23334678887
No 23
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=87.53 E-value=0.58 Score=36.66 Aligned_cols=46 Identities=13% Similarity=0.223 Sum_probs=35.6
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEe---cCCceeEEEEE
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL---DSSGKHNKFAI 100 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT---~Ger~~DvFYV 100 (106)
..|-+-+.-.|+||.|+++.+.|++.|+|+.+ |.+ .+.-..=.|||
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~Ffv 247 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTK--IESRPSRKKAFEYLFYA 247 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTEEEEEE
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeE--EEeeEcCCCCcceEEEE
Confidence 35666666689999999999999999999875 444 34444778887
No 24
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=86.96 E-value=1 Score=31.52 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=32.3
Q ss_pred CCcEEEEEEeCC---cccHHHHHHHHHHhCCcEEEEEEEEe
Q 033987 52 PDATIVEITFGD---RLGALLDTMNALKNLGLNVVKANVFL 89 (106)
Q Consensus 52 ~~~TVVEV~a~D---RpGLL~di~~aL~dLgL~I~~A~IsT 89 (106)
+..++|.|.+.+ +||.+..+.++|.+.|++|.. |+|
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~--ist 139 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM--IST 139 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE--EEE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE--EEc
Confidence 468999999988 999999999999999999987 455
No 25
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=85.48 E-value=0.96 Score=36.00 Aligned_cols=46 Identities=26% Similarity=0.410 Sum_probs=34.8
Q ss_pred CcEEEEEEeC-CcccHHHHHHHHHHhCCcEEEEEEEEe---cCCceeEEEEE
Q 033987 53 DATIVEITFG-DRLGALLDTMNALKNLGLNVVKANVFL---DSSGKHNKFAI 100 (106)
Q Consensus 53 ~~TVVEV~a~-DRpGLL~di~~aL~dLgL~I~~A~IsT---~Ger~~DvFYV 100 (106)
..|-|-+.-. |+||.|+++.+.|++.|+|+.+ |.+ .+.-..=.|||
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~Ffi 249 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSR--IESRPTGQYLGHYFFSI 249 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTTSEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEE--EEEeecCCCCccEEEEE
Confidence 4576767774 9999999999999999999864 444 23333567887
No 26
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=84.85 E-value=0.65 Score=32.44 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=29.3
Q ss_pred CCcEEEEEEe-CCcccHHHHHHHHHHhCCcEEEEEE
Q 033987 52 PDATIVEITF-GDRLGALLDTMNALKNLGLNVVKAN 86 (106)
Q Consensus 52 ~~~TVVEV~a-~DRpGLL~di~~aL~dLgL~I~~A~ 86 (106)
.+.++|.|.+ .|+||.+.++.++|.+.|++|..-.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~ 49 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMII 49 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEE
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEE
Confidence 4567777766 7999999999999999999998743
No 27
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=83.52 E-value=1.3 Score=35.42 Aligned_cols=37 Identities=16% Similarity=0.325 Sum_probs=28.8
Q ss_pred CCcccHHHHHHHHHHhCCcEEEEEEEEe---cCCceeEEEEE
Q 033987 62 GDRLGALLDTMNALKNLGLNVVKANVFL---DSSGKHNKFAI 100 (106)
Q Consensus 62 ~DRpGLL~di~~aL~dLgL~I~~A~IsT---~Ger~~DvFYV 100 (106)
.|+||.|+++-..|++.|+|+.+ |.+ .+.-..=.|||
T Consensus 216 ~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~~Y~Ffi 255 (329)
T 3luy_A 216 VTGPGVLANLLDVFRDAGLNMTS--FISRPIKGRTGTYSFIV 255 (329)
T ss_dssp CCSTTHHHHHHHHHHHTTCCEEE--EEEEEETTEEEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHCCcceEE--EEeeECCCCCccEEEEE
Confidence 38999999999999999999865 443 34444667887
No 28
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.15 E-value=3.3 Score=33.98 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=44.1
Q ss_pred CcCCCEEEEeCCCCCCcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCce
Q 033987 38 TIPTPKVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGK 94 (106)
Q Consensus 38 ~vp~prV~IDN~ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~ 94 (106)
.|+.|.|.... .+...-|-+.-.|+||.|.+|.++|.+.|+||..=.-.|.|+.+
T Consensus 329 ~Vn~p~~~~~~--~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~ 383 (416)
T 3k5p_A 329 AVNFPQVQLPP--RPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVG 383 (416)
T ss_dssp BSSSCCCCCCC--CSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCE
T ss_pred eeeCCCcCCCC--CCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceE
Confidence 34445554432 33456788888999999999999999999999999999999975
No 29
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=82.99 E-value=6.7 Score=30.34 Aligned_cols=39 Identities=15% Similarity=0.127 Sum_probs=34.5
Q ss_pred CCcEEEEEEeCC-cccHHHHHHHHHHhCCcEEEEEEEEec
Q 033987 52 PDATIVEITFGD-RLGALLDTMNALKNLGLNVVKANVFLD 90 (106)
Q Consensus 52 ~~~TVVEV~a~D-RpGLL~di~~aL~dLgL~I~~A~IsT~ 90 (106)
...-++.+.++| ++|++.++++.|.+.|+||....--+.
T Consensus 99 ~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~ 138 (415)
T 3p96_A 99 PSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD 138 (415)
T ss_dssp CCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES
T ss_pred CCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC
Confidence 456689999999 999999999999999999988877764
No 30
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=82.92 E-value=1.1 Score=31.77 Aligned_cols=38 Identities=16% Similarity=0.201 Sum_probs=30.9
Q ss_pred CCcEEEEE-EeCCcccHHHHHHHHHHhCCcEEEEEEEEe
Q 033987 52 PDATIVEI-TFGDRLGALLDTMNALKNLGLNVVKANVFL 89 (106)
Q Consensus 52 ~~~TVVEV-~a~DRpGLL~di~~aL~dLgL~I~~A~IsT 89 (106)
.+.+.|.| ...|+||.|.++.+.|.+.|++|..-..++
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~ 51 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV 51 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45677777 358999999999999999999988765543
No 31
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=81.89 E-value=1.3 Score=36.65 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=33.6
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEec--CCceeEEEEEee
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD--SSGKHNKFAITK 102 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~--Ger~~DvFYVTD 102 (106)
.-.+.+...||||.|.+|+++|.+.|++|.+-.=.-. ++.......||.
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 3467788899999999999999999999987432211 112356666664
No 32
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=81.15 E-value=1.5 Score=31.09 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=32.4
Q ss_pred EEEEeCCCCCCcEEEEEEeC---CcccHHHHHHHHHHhCCcEEEE
Q 033987 43 KVIIDLDSDPDATIVEITFG---DRLGALLDTMNALKNLGLNVVK 84 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a~---DRpGLL~di~~aL~dLgL~I~~ 84 (106)
.|.++ ++..+|.|.+. ++||.+..+.++|.+.|++|..
T Consensus 88 ~v~~~----~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ 128 (178)
T 2dtj_A 88 NVLYD----DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 128 (178)
T ss_dssp EEEEE----SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred eEEEe----CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE
Confidence 45554 46788888887 8999999999999999999987
No 33
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=81.14 E-value=4.3 Score=33.53 Aligned_cols=49 Identities=24% Similarity=0.242 Sum_probs=40.0
Q ss_pred CCCCcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEec--CCceeEEE
Q 033987 50 SDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFLD--SSGKHNKF 98 (106)
Q Consensus 50 ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~--Ger~~DvF 98 (106)
..+....+-+.-.||||.+..++..|.+.|+||..-.+.-. |+.++=++
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i 500 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILL 500 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEE
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEE
Confidence 55667788899999999999999999999999999999764 44444343
No 34
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=79.13 E-value=2 Score=29.84 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=29.5
Q ss_pred CCcEEEEEEeCC---cccHHHHHHHHHHhCCcEEEE
Q 033987 52 PDATIVEITFGD---RLGALLDTMNALKNLGLNVVK 84 (106)
Q Consensus 52 ~~~TVVEV~a~D---RpGLL~di~~aL~dLgL~I~~ 84 (106)
+...+|.|.+.+ +||.+..+.++|.+.|++|..
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCE
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEE
Confidence 567889999987 999999999999999999944
No 35
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=73.36 E-value=1.7 Score=36.47 Aligned_cols=49 Identities=12% Similarity=0.220 Sum_probs=36.2
Q ss_pred CCCCcEEEEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEe---cCCceeEEEEE
Q 033987 50 SDPDATIVEITFGDRLGALLDTMNALKNLGLNVVKANVFL---DSSGKHNKFAI 100 (106)
Q Consensus 50 ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT---~Ger~~DvFYV 100 (106)
.....|-|-+.-.|+||.|+++.+.|++.|+|+.+ |.+ .+....=.|||
T Consensus 30 tg~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTk--IESRPsk~~~~eY~FfV 81 (429)
T 1phz_A 30 NQNGAISLIFSLKEEVGALAKVLRLFEENDINLTH--IESRPSRLNKDEYEFFT 81 (429)
T ss_dssp CSSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTS--EEEEECSSCTTEEEEEE
T ss_pred CCCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEE--EEeeecCCCCccEEEEE
Confidence 34456667777789999999999999999999764 333 23334667777
No 36
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=61.36 E-value=6.4 Score=29.17 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=27.0
Q ss_pred CcEEEEEEe-CCcccHHHHHHHHHHhCCcEEEEE
Q 033987 53 DATIVEITF-GDRLGALLDTMNALKNLGLNVVKA 85 (106)
Q Consensus 53 ~~TVVEV~a-~DRpGLL~di~~aL~dLgL~I~~A 85 (106)
+.+.|.|.. .|+||.+.+|-++|.+.|++|..=
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI 67 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMV 67 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEEE
Confidence 445555543 799999999999999999999764
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=58.01 E-value=12 Score=26.74 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=33.2
Q ss_pred EEEEeCCCCCCcEEEEEEeC---CcccHHHHHHHHHHhCCcEEEEEE
Q 033987 43 KVIIDLDSDPDATIVEITFG---DRLGALLDTMNALKNLGLNVVKAN 86 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a~---DRpGLL~di~~aL~dLgL~I~~A~ 86 (106)
.|.++ +...+|.|.+. ++||.+..+.++|.+.|++|..-.
T Consensus 89 ~v~~~----~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 89 QLLYD----DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp EEEEE----SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eEEEe----CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 56665 35778888776 899999999999999999998765
No 38
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=52.42 E-value=13 Score=26.48 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=26.2
Q ss_pred CcEEEEEE-eCCcccHHHHHHHHHHhCCcEEEEE
Q 033987 53 DATIVEIT-FGDRLGALLDTMNALKNLGLNVVKA 85 (106)
Q Consensus 53 ~~TVVEV~-a~DRpGLL~di~~aL~dLgL~I~~A 85 (106)
+.+.|.|. -.|+||.+.+|-++|.+.|++|..-
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I 48 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMV 48 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCE
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEE
Confidence 44455553 4699999999999999999999754
No 39
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=49.43 E-value=15 Score=29.27 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=30.6
Q ss_pred CCcEEEEEE-eCCcccHHHHHHHHHHhCCcEEEEEEEE
Q 033987 52 PDATIVEIT-FGDRLGALLDTMNALKNLGLNVVKANVF 88 (106)
Q Consensus 52 ~~~TVVEV~-a~DRpGLL~di~~aL~dLgL~I~~A~Is 88 (106)
.+.+.|.|. -.|++|.+.++-+.|.+.|++|..-..+
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~ 299 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQN 299 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEEC
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEcc
Confidence 356778887 5899999999999999999999865443
No 40
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=48.83 E-value=10 Score=26.01 Aligned_cols=34 Identities=6% Similarity=-0.076 Sum_probs=27.8
Q ss_pred CCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEEE
Q 033987 52 PDATIVEITF---GDRLGALLDTMNALKNLGLNVVKA 85 (106)
Q Consensus 52 ~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~A 85 (106)
++.+.|.|.+ .++||.+.++-++|.+.|++|..-
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I 52 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMV 52 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCE
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEE
Confidence 3567788875 478999999999999999998643
No 41
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=47.43 E-value=41 Score=20.84 Aligned_cols=35 Identities=3% Similarity=-0.015 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 67 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 67 LL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
=|.++.+.|.+.|+.+...-....+. ..||++|.+
T Consensus 108 d~~~~~~~l~~~G~~~~~~~~~~~~g---~~~~~~DPd 142 (156)
T 3kol_A 108 LFDRAVTVIGENKIAIAHGPVTRPTG---RGVYFYDPD 142 (156)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEC-CC---EEEEEECTT
T ss_pred HHHHHHHHHHHCCCccccCceecCCc---cEEEEECCC
Confidence 37788889999999997765554333 288999876
No 42
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=43.26 E-value=56 Score=20.04 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=29.6
Q ss_pred cHHHHHHHHHHhCCcEEEEEEEEe-cCC-ceeEEEEEeecc
Q 033987 66 GALLDTMNALKNLGLNVVKANVFL-DSS-GKHNKFAITKAY 104 (106)
Q Consensus 66 GLL~di~~aL~dLgL~I~~A~IsT-~Ge-r~~DvFYVTD~~ 104 (106)
.=|.++.+.|.+.|+.+...-... .|. +..-.||++|.+
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPd 119 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPS 119 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTT
T ss_pred HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCC
Confidence 568889999999999997776654 342 345689999976
No 43
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=38.87 E-value=22 Score=28.95 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=33.5
Q ss_pred EEEEeCCCCCCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEEEEE
Q 033987 43 KVIIDLDSDPDATIVEITF---GDRLGALLDTMNALKNLGLNVVKANV 87 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~A~I 87 (106)
-|..+ ++.+.|.|.+ .+++|.+.++.++|.+.|++|..-..
T Consensus 311 gIa~~----~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ 354 (473)
T 3c1m_A 311 AISTI----KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQ 354 (473)
T ss_dssp EEEEE----EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhcc----CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEe
Confidence 45553 4678888886 68899999999999999999987554
No 44
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=38.48 E-value=32 Score=27.36 Aligned_cols=38 Identities=21% Similarity=0.323 Sum_probs=31.2
Q ss_pred EEEEeCCCCCCcEEEEEEeC---CcccHHHHHHHHHHhCCcEEEE
Q 033987 43 KVIIDLDSDPDATIVEITFG---DRLGALLDTMNALKNLGLNVVK 84 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a~---DRpGLL~di~~aL~dLgL~I~~ 84 (106)
.|.++ ++..+|.|.+. ++||.+..+.++|.+.|++|..
T Consensus 337 ~v~~~----~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 377 (421)
T 3ab4_A 337 NVLYD----DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 377 (421)
T ss_dssp EEEEE----CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCE
T ss_pred eEEEe----CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEE
Confidence 45554 45677888885 7999999999999999999983
No 45
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=37.28 E-value=44 Score=21.30 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCC-ceeEEEEEeecc
Q 033987 67 ALLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 104 (106)
Q Consensus 67 LL~di~~aL~dLgL~I~~A~IsT~Ge-r~~DvFYVTD~~ 104 (106)
=|.++.+.|.+.|+.+...-+...|. ...-.||++|.+
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPd 138 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTT
T ss_pred CHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCC
Confidence 47788889999999998766654444 345679999976
No 46
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=35.52 E-value=53 Score=19.70 Aligned_cols=37 Identities=19% Similarity=0.336 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCC-ceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ge-r~~DvFYVTD~~ 104 (106)
|.++.+.|.+.|+.+...-....+. ...-.||++|.+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPd 121 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTT
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCC
Confidence 7888899999999998765544443 345688999875
No 47
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=35.22 E-value=91 Score=20.20 Aligned_cols=34 Identities=9% Similarity=0.167 Sum_probs=26.1
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
+.++.+.|.+.|+.+...-....+. -.||++|.+
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPd 109 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSD 109 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTT
T ss_pred HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCC
Confidence 7788899999999998776554433 368999876
No 48
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=32.51 E-value=85 Score=19.03 Aligned_cols=37 Identities=5% Similarity=0.142 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
+.+..+.|++.|+.+...-....+.+-.-.+|+.|.+
T Consensus 88 i~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPd 124 (133)
T 3hdp_A 88 IQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTD 124 (133)
T ss_dssp HHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETT
T ss_pred HHHHHHHHHHcCCccccCCeecccCCCceEEEEECCC
Confidence 6788899999999987753323333334678998875
No 49
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=29.54 E-value=1e+02 Score=20.05 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=27.5
Q ss_pred cccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeec
Q 033987 64 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 103 (106)
Q Consensus 64 RpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~ 103 (106)
.+|-||.+-+-|.+.|+-... ....++.+..-.|.+|+.
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~-~~~~~~g~~rk~Y~LT~~ 79 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGT-LKASSLGPKRKYYHITDK 79 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEE-EEECTTSCEEEEEEECHH
T ss_pred CcChHHHHHHHHHHCCCeEEE-eeecCCCCCcEEEEECHH
Confidence 479999999999999995443 333344555556668863
No 50
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=28.63 E-value=1.1e+02 Score=19.10 Aligned_cols=45 Identities=9% Similarity=0.035 Sum_probs=30.4
Q ss_pred CcEEEEEEeCCcccHHHHHHHHHHhCCcE-EEEEEEEecCCceeEEEEEeecc
Q 033987 53 DATIVEITFGDRLGALLDTMNALKNLGLN-VVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 53 ~~TVVEV~a~DRpGLL~di~~aL~dLgL~-I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
....+-+...| +.++.+.|.++|.. +...-.... +-.- ||++|.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~--~G~~-~~~~DPd 111 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMP--DGKK-AIVLDPD 111 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC---CEE-EEEECTT
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCC--CccE-EEEECCC
Confidence 34455666666 88999999999999 765444332 2222 8999976
No 51
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=28.21 E-value=39 Score=27.62 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=29.2
Q ss_pred CCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEE
Q 033987 52 PDATIVEITF---GDRLGALLDTMNALKNLGLNVVK 84 (106)
Q Consensus 52 ~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~ 84 (106)
.+.+.|.|.. .+++|.+.+|-++|.+.|++|..
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~ 331 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH 331 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE
Confidence 4677899987 58999999999999999999975
No 52
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=27.01 E-value=1.3e+02 Score=19.28 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=26.2
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
|.+..+.|++.|..+...-....+.+ .+|++|.+
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~~~~g~---~~~f~DPd 142 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTDMGPVV---TAILDDTC 142 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSSCE---EEEEECSS
T ss_pred hhhhhhHHhcCCcEEeeCCEEcCCeE---EEEEECCC
Confidence 66788899999999988776655543 57888875
No 53
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=26.94 E-value=77 Score=19.94 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCC-ceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSS-GKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ge-r~~DvFYVTD~~ 104 (106)
|.++.+.|.+.|+.+...-....+. ...-.||+.|.+
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPd 134 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTT
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCC
Confidence 7888889999999987765544433 345788999876
No 54
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=26.91 E-value=61 Score=26.27 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=27.8
Q ss_pred CCcEEEEEEeC---CcccHHHHHHHHHHhCCcEEE
Q 033987 52 PDATIVEITFG---DRLGALLDTMNALKNLGLNVV 83 (106)
Q Consensus 52 ~~~TVVEV~a~---DRpGLL~di~~aL~dLgL~I~ 83 (106)
++..+|.|.+. ++||.+..+.++|.+.|++|.
T Consensus 402 ~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 402 KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 46678888886 489999999999999999993
No 55
>1lfd_A Ralgds; RAL, effector interaction; HET: GNP; 2.10A {Rattus norvegicus} SCOP: d.15.1.5 PDB: 2b3a_A
Probab=26.54 E-value=74 Score=21.28 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=31.5
Q ss_pred EEEEeCCCCCCcEEEEEEeCCcccHHHHHHHHHHhCCcE
Q 033987 43 KVIIDLDSDPDATIVEITFGDRLGALLDTMNALKNLGLN 81 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~a~DRpGLL~di~~aL~dLgL~ 81 (106)
||.+|++....|-=|-|...||---+ |.++|.++||.
T Consensus 7 RVs~d~~~gn~YKSI~ltsqDrtp~v--I~~al~Khnl~ 43 (87)
T 1lfd_A 7 RVSLDVDNGNMYKSILVTSQDKAPTV--IRKAMDKHNLD 43 (87)
T ss_dssp EEEESSCSSEEEEEEEEETTCBHHHH--HHHHHHHTTCC
T ss_pred EEEEecCCCcEEEEEEEecCCCcHHH--HHHHHHHcCCC
Confidence 89999988888988999999996544 67889999885
No 56
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=25.96 E-value=56 Score=27.20 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=30.0
Q ss_pred CCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEEE
Q 033987 52 PDATIVEITF---GDRLGALLDTMNALKNLGLNVVKA 85 (106)
Q Consensus 52 ~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~A 85 (106)
.+.+.|.|.. .+++|.+.++-++|.+.|++|..-
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I 375 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV 375 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE
Confidence 3678899987 679999999999999999999865
No 57
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=25.92 E-value=82 Score=19.95 Aligned_cols=36 Identities=11% Similarity=-0.028 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 67 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 67 LL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
=|.++.+.|.+.|+.+........| ..-.||++|.+
T Consensus 97 dld~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~~DPd 132 (141)
T 3ghj_A 97 EIEPLKKALESKGVSVHGPVNQEWM--QAVSLYFADPN 132 (141)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEGGG--TEEEEEEECTT
T ss_pred HHHHHHHHHHHCCCeEeCCcccCCC--CceEEEEECCC
Confidence 3778889999999999843332222 24689999976
No 58
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=25.33 E-value=71 Score=27.55 Aligned_cols=27 Identities=22% Similarity=0.565 Sum_probs=22.2
Q ss_pred cEEEEEEeCCcccHHHHHHHHHHhCCcEEE
Q 033987 54 ATIVEITFGDRLGALLDTMNALKNLGLNVV 83 (106)
Q Consensus 54 ~TVVEV~a~DRpGLL~di~~aL~dLgL~I~ 83 (106)
.-+|.| .||.||+ ++++.|.++|..|.
T Consensus 26 raLISV--~DK~glv-~~Ak~L~~lGfeI~ 52 (534)
T 4ehi_A 26 RALLSV--SDKEGIV-EFGKELENLGFEIL 52 (534)
T ss_dssp EEEEEE--SSCTTHH-HHHHHHHHTTCEEE
T ss_pred EEEEEE--cccccHH-HHHHHHHHCCCEEE
Confidence 346667 6999955 99999999999985
No 59
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=25.02 E-value=1.1e+02 Score=26.28 Aligned_cols=26 Identities=19% Similarity=0.528 Sum_probs=21.6
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEE
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVV 83 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~ 83 (106)
-+|.| .||.||+ ++++.|.++|..|.
T Consensus 13 aLISV--sDK~glv-elAk~L~~lGfeI~ 38 (523)
T 3zzm_A 13 ALISV--YDKTGLV-DLAQGLSAAGVEII 38 (523)
T ss_dssp EEEEE--SSCTTHH-HHHHHHHHTTCEEE
T ss_pred EEEEE--eccccHH-HHHHHHHHCCCEEE
Confidence 45566 6999955 99999999999985
No 60
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=24.88 E-value=1.3e+02 Score=19.74 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=26.4
Q ss_pred cccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeec
Q 033987 64 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 103 (106)
Q Consensus 64 RpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~ 103 (106)
.+|-||.+-+-|.+.|+--.. .....+.+..-.|.+|+.
T Consensus 45 s~gtlY~~L~rLe~~GlI~~~-~~~~~~g~~rk~Y~lT~~ 83 (116)
T 3hhh_A 45 VEGTVYTILLRLEKNQWVIAE-KKPSEKGPMRKFYRLTSS 83 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEE-EEECC--CEEEEEEECHH
T ss_pred CccHHHHHHHHHHHCCCEEEE-eeecCCCCCceEEEECHH
Confidence 479999999999999995443 333334455556668763
No 61
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=23.62 E-value=54 Score=27.67 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCcEEEEEE-eCCcccHHHHHHHHHHhCCcEEEEE
Q 033987 43 KVIIDLDSDPDATIVEIT-FGDRLGALLDTMNALKNLGLNVVKA 85 (106)
Q Consensus 43 rV~IDN~ss~~~TVVEV~-a~DRpGLL~di~~aL~dLgL~I~~A 85 (106)
-|..|. +.+.|.|. -.|+||.+.++-+.|.+.|++|..-
T Consensus 437 Gia~~~----~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI 476 (600)
T 3l76_A 437 GVALDQ----DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMI 476 (600)
T ss_dssp EEEEEC----SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEE
T ss_pred EEEeeC----CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEE
Confidence 455543 34455553 4799999999999999999999543
No 62
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=22.98 E-value=1e+02 Score=21.43 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=28.6
Q ss_pred CCCCcEEEEEEe---CCcccHHHHHHHHHHhCCcEEEEEEEEec
Q 033987 50 SDPDATIVEITF---GDRLGALLDTMNALKNLGLNVVKANVFLD 90 (106)
Q Consensus 50 ss~~~TVVEV~a---~DRpGLL~di~~aL~dLgL~I~~A~IsT~ 90 (106)
....+..|.|.. .|-.|++..++..|++.|+.|.. |+|+
T Consensus 67 ~~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iSty 108 (133)
T 1zvp_A 67 SSALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IAGY 108 (133)
T ss_dssp CCSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EECS
T ss_pred cCCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EEec
Confidence 334555666644 78999999999999999998863 4544
No 63
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=22.41 E-value=53 Score=22.40 Aligned_cols=28 Identities=21% Similarity=0.262 Sum_probs=23.0
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCcEEE
Q 033987 55 TIVEITFGDRLGALLDTMNALKNLGLNVV 83 (106)
Q Consensus 55 TVVEV~a~DRpGLL~di~~aL~dLgL~I~ 83 (106)
-++.|.-.|+++++ ++++.|.++|..|.
T Consensus 27 vliSv~d~dK~~l~-~~a~~l~~lGf~i~ 54 (143)
T 2yvq_A 27 ILIGIQQSFRPRFL-GVAEQLHNEGFKLF 54 (143)
T ss_dssp EEEECCGGGHHHHH-HHHHHHHTTTCEEE
T ss_pred EEEEecccchHHHH-HHHHHHHHCCCEEE
Confidence 57788888899866 58889999999875
No 64
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=22.11 E-value=1.5e+02 Score=19.34 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=26.2
Q ss_pred ccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeec
Q 033987 65 LGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 103 (106)
Q Consensus 65 pGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~ 103 (106)
+|-||.+-+.|.+.||-...- ....+.+..-.|.+|+.
T Consensus 47 ~gtly~~L~~Le~~GlI~~~~-~~~~~~~~rk~Y~lT~~ 84 (117)
T 3elk_A 47 QGSIYILLKTMKERGFVISES-SVNEKGQQLTVYHITDA 84 (117)
T ss_dssp TTHHHHHHHHHHHHTSEEEEE-EEC-CCCEEEEEEECHH
T ss_pred cchHHHHHHHHHHCCCEEEEe-eecCCCCCceEEEECHH
Confidence 599999999999999955443 32344455556668763
No 65
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=21.88 E-value=1.3e+02 Score=17.78 Aligned_cols=42 Identities=17% Similarity=0.286 Sum_probs=28.1
Q ss_pred EEEEeCCcccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 57 VEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 57 VEV~a~DRpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
+-+...| +.++.+.|.+.|..+...-.... +-.-.||++|.+
T Consensus 67 ~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPd 108 (118)
T 2i7r_A 67 IHIEVED----VDQNYKRLNELGIKVLHGPTVTD--WGTESLLVQGPA 108 (118)
T ss_dssp EEEECSC----HHHHHHHHHHHTCCEEEEEEECT--TSCEEEEEECGG
T ss_pred EEEEECC----HHHHHHHHHHCCCceecCCcccc--CccEEEEEECCC
Confidence 4444444 77888899999999866544332 334567899875
No 66
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=21.77 E-value=1.2e+02 Score=17.95 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=25.3
Q ss_pred HHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
+.++.+.|.+.|..+...-.... +-.-.||++|.+
T Consensus 75 ~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPd 109 (119)
T 2pjs_A 75 FDEVHARILKAGLPIEYGPVTEA--WGVQRLFLRDPF 109 (119)
T ss_dssp HHHHHHHHHHTTCCCSEEEEECT--TSCEEEEEECTT
T ss_pred HHHHHHHHHHCCCccccCCccCC--CccEEEEEECCC
Confidence 77888999999999876543332 224578999875
No 67
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=21.32 E-value=1.5e+02 Score=18.21 Aligned_cols=36 Identities=6% Similarity=-0.148 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 67 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 67 LL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
=|.++.+.|.+.|..+...-.... +-.-.||++|.+
T Consensus 84 dv~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPd 119 (138)
T 2a4x_A 84 SVDKKYAELVDAGYEGHLKPWNAV--WGQRYAIVKDPD 119 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEET--TTEEEEEEECTT
T ss_pred HHHHHHHHHHHCCCceeeCCcccC--CCcEEEEEECCC
Confidence 467778889999999876544332 224578899875
No 68
>2jys_A Protease/reverse transcriptase; retroviral protease, hydrolase; NMR {Simian foamy virus type 1}
Probab=21.06 E-value=58 Score=22.60 Aligned_cols=28 Identities=7% Similarity=0.039 Sum_probs=22.2
Q ss_pred HHHhCCcEEEEEEEEe-cCCceeEEEEEe
Q 033987 74 ALKNLGLNVVKANVFL-DSSGKHNKFAIT 101 (106)
Q Consensus 74 aL~dLgL~I~~A~IsT-~Ger~~DvFYVT 101 (106)
+|-.-.--|...-|.| .|++-.|++|++
T Consensus 35 ~fL~~E~PI~~~~I~TIHG~k~q~vYYl~ 63 (107)
T 2jys_A 35 AFLEDERPIQTMLIKTIHGEKQQDVYYLT 63 (107)
T ss_dssp GGTTTCCCSEEEEEECSSCEEEEEEEEEE
T ss_pred HHhcccccccceEEEEecCceeceEEEEE
Confidence 3444556678888998 899999999996
No 69
>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}
Probab=20.65 E-value=2.3e+02 Score=21.06 Aligned_cols=37 Identities=11% Similarity=0.065 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCcEEEEEEEE--ecCCceeEEEEEeecc
Q 033987 68 LLDTMNALKNLGLNVVKANVF--LDSSGKHNKFAITKAY 104 (106)
Q Consensus 68 L~di~~aL~dLgL~I~~A~Is--T~Ger~~DvFYVTD~~ 104 (106)
|....+.|.++|+.+...... +.|..-...||+.|.+
T Consensus 233 ld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPd 271 (330)
T 3zi1_A 233 LPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPD 271 (330)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTT
T ss_pred HHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCC
Confidence 788889999999998776543 3444455789999976
No 70
>1wj5_A Hypothetical protein (riken cDNA 0610009H20); winged helix, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.4.5.59
Probab=20.50 E-value=35 Score=24.24 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 65 LGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 65 pGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
.-++-+..+.|.+.|+.-+| ++..-++|||||.|
T Consensus 77 ~sifKeAi~~Lqe~G~VfqK------~~~~d~lYyVT~qD 110 (120)
T 1wj5_A 77 QRVFKNALQLLQEKGLVFQR------DSGSDKLYYVTTKD 110 (120)
T ss_dssp HHHHHHHHHHHHHHTSEECS------SCSSSCCBEECSSS
T ss_pred HHHHHHHHHHHHHCCEEEec------cCCccceEEeeccc
Confidence 34666888999999987665 33344799999986
No 71
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=20.30 E-value=1.6e+02 Score=18.14 Aligned_cols=36 Identities=11% Similarity=-0.043 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeecc
Q 033987 67 ALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKAY 104 (106)
Q Consensus 67 LL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~~ 104 (106)
-|.++.+.|.+.|..+...-.... +..-.||++|.+
T Consensus 88 dv~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~DPd 123 (141)
T 2rbb_A 88 AVDKLVPVAIAAGATLIKAPYETY--YHWYQAVLLDPE 123 (141)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECT--TSEEEEEEECTT
T ss_pred HHHHHHHHHHHcCCeEecCccccC--CccEEEEEECCC
Confidence 467788889999999876644332 335678999876
No 72
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=20.12 E-value=1.4e+02 Score=19.56 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=24.8
Q ss_pred cccHHHHHHHHHHhCCcEEEEEEEEecCCceeEEEEEeec
Q 033987 64 RLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFAITKA 103 (106)
Q Consensus 64 RpGLL~di~~aL~dLgL~I~~A~IsT~Ger~~DvFYVTD~ 103 (106)
.+|-||.+-+.|.+.|+--..-. ...+.+..-.|.+|+.
T Consensus 43 s~gtlY~~L~rLe~~GlI~~~~~-~~~~g~~rk~Y~LT~~ 81 (117)
T 4esf_A 43 VEGTVYTILVRLEKKKLVNIEKK-PSDMGPPRKFYSLNEA 81 (117)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE-C-----CEEEEEECHH
T ss_pred CccHHHHHHHHHHHCCCEEEEee-cCCCCCCceEEEECHH
Confidence 47999999999999999544432 2234444556668763
Done!