BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 033996
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356552976|ref|XP_003544835.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Glycine max]
Length = 106
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/106 (95%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFKSE+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKSEDSQEIVGRVKIVACDSKLLTQ 106
>gi|357501375|ref|XP_003620976.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|217071430|gb|ACJ84075.1| unknown [Medicago truncatula]
gi|355495991|gb|AES77194.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|388521381|gb|AFK48752.1| unknown [Medicago truncatula]
Length = 106
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/106 (94%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PE+AIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPEIAIQVLVQFDKSMTEALETQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+E+ QE VGRVKIVACDSKLLSQ
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLSQ 106
>gi|356500773|ref|XP_003519205.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Glycine max]
Length = 106
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/106 (94%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+E+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106
>gi|388497136|gb|AFK36634.1| unknown [Lotus japonicus]
Length = 106
Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/106 (94%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALETQVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+E+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKNEDNQENVGRVKIVACDSKLLTQ 106
>gi|302142093|emb|CBI19296.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/106 (93%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALE+QVKSKV+IK
Sbjct: 58 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 117
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+EE QE VGRVKIVACDSKLL+Q
Sbjct: 118 GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 163
>gi|225459042|ref|XP_002285630.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Vitis vinifera]
gi|359492969|ref|XP_003634490.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Vitis vinifera]
gi|147775910|emb|CAN60284.1| hypothetical protein VITISV_015528 [Vitis vinifera]
Length = 106
Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/106 (93%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALE+QVKSKV+IK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+EE QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLLTQ 106
>gi|255572854|ref|XP_002527359.1| transcription initiation factor iia (tfiia), gamma chain, putative
[Ricinus communis]
gi|223533278|gb|EEF35031.1| transcription initiation factor iia (tfiia), gamma chain, putative
[Ricinus communis]
Length = 106
Score = 207 bits (526), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/106 (92%), Positives = 104/106 (98%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQ+GTL+PELAIQVLVQFDKSMTEALE+QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFK+E+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKNEDSQENVGRVKIVACDSKLLTQ 106
>gi|224081907|ref|XP_002306523.1| predicted protein [Populus trichocarpa]
gi|222855972|gb|EEE93519.1| predicted protein [Populus trichocarpa]
Length = 106
Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 103/106 (97%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLD+MVQNGTL+PELA QVLVQFDKSMTEALET+VKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDDMVQNGTLSPELAFQVLVQFDKSMTEALETKVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDA+FK+E+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDAMFKNEDTQENVGRVKIVACDSKLLTQ 106
>gi|449441770|ref|XP_004138655.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
gi|449490144|ref|XP_004158520.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
Length = 106
Score = 204 bits (518), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/106 (89%), Positives = 102/106 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALE+QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDA FK+E+ E VGR+KIVACDSKLLSQ
Sbjct: 61 GHLHTYRFCDNVWTFILQDASFKNEDSSENVGRIKIVACDSKLLSQ 106
>gi|449441772|ref|XP_004138656.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cucumis sativus]
Length = 106
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/106 (90%), Positives = 101/106 (95%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQNGTL+PELAIQVLVQFDKSMTEALE+QVKSKV IK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVIIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDA FK+E+ E VGR+KIVACDSKLLSQ
Sbjct: 61 GHLHTYRFCDNVWTFILQDASFKNEDSNEVVGRIKIVACDSKLLSQ 106
>gi|15233829|ref|NP_194175.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|30686529|ref|NP_849434.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|297803670|ref|XP_002869719.1| transcription initiation factor IIA gamma chain [Arabidopsis lyrata
subsp. lyrata]
gi|20141796|sp|Q39236.2|T2AG_ARATH RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|2826882|emb|CAA11524.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|5051786|emb|CAB45079.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|7269294|emb|CAB79354.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|18176271|gb|AAL60014.1| putative transcription factor IIA small subunit [Arabidopsis
thaliana]
gi|20465319|gb|AAM20063.1| putative transcription factor IIA small subunit [Arabidopsis
thaliana]
gi|21553865|gb|AAM62958.1| transcription factor IIA small subunit [Arabidopsis thaliana]
gi|39545876|gb|AAR28001.1| TFIIA-S [Arabidopsis thaliana]
gi|222424034|dbj|BAH19978.1| AT4G24440 [Arabidopsis thaliana]
gi|297315555|gb|EFH45978.1| transcription initiation factor IIA gamma chain [Arabidopsis lyrata
subsp. lyrata]
gi|332659504|gb|AEE84904.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
gi|332659505|gb|AEE84905.1| transcription initiation factor IIA subunit 2 [Arabidopsis
thaliana]
Length = 106
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/106 (89%), Positives = 103/106 (97%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQ+GTL+PELAIQVLVQFDKSMTEALE+QVK+KVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDA+FKS++ QE V RVKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLLTQ 106
>gi|115461653|ref|NP_001054426.1| Os05g0107700 [Oryza sativa Japonica Group]
gi|122169632|sp|Q0DLD3.1|T2AG_ORYSJ RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|158513184|sp|A2XZI2.2|T2AG_ORYSI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|14719311|gb|AAK73129.1|AC079022_2 putative transcription factor IIA small subunit [Oryza sativa]
gi|28195115|gb|AAO33769.1| transcription factor IIA small subunit [Oryza sativa Indica Group]
gi|52353565|gb|AAU44131.1| putative transcription initiation factor IIA gamma chain [Oryza
sativa Japonica Group]
gi|55585041|gb|AAV53716.1| transcription factor IIA gamma subunit [Oryza sativa Indica Group]
gi|113577977|dbj|BAF16340.1| Os05g0107700 [Oryza sativa Japonica Group]
gi|215694411|dbj|BAG89404.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195944|gb|EEC78371.1| hypothetical protein OsI_18140 [Oryza sativa Indica Group]
gi|222629915|gb|EEE62047.1| hypothetical protein OsJ_16831 [Oryza sativa Japonica Group]
gi|347737139|gb|AEP20535.1| transcription factor [Oryza sativa Japonica Group]
Length = 106
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 99/106 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVACDSKLLSQ
Sbjct: 61 GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106
>gi|226497468|ref|NP_001152705.1| LOC100286346 [Zea mays]
gi|195611888|gb|ACG27774.1| transcription initiation factor IIA gamma chain [Zea mays]
gi|195659197|gb|ACG49066.1| transcription initiation factor IIA gamma chain [Zea mays]
gi|219887343|gb|ACL54046.1| unknown [Zea mays]
gi|413950271|gb|AFW82920.1| transcription initiation factor IIA gamma chain [Zea mays]
Length = 106
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/106 (86%), Positives = 98/106 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGTL+PELAIQVLVQFDKSMT+ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL DA FK+EE E VG+VKIVACDSKLL Q
Sbjct: 61 GHLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSKLLGQ 106
>gi|357490101|ref|XP_003615338.1| Transcription initiation factor IIA subunit [Medicago truncatula]
gi|355516673|gb|AES98296.1| Transcription initiation factor IIA subunit [Medicago truncatula]
Length = 106
Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/106 (84%), Positives = 101/106 (95%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIG CLT+TLD++VQNGTL+P+ AI++L+QFDKS+TEALET+VKSKVSIK
Sbjct: 1 MATFELYRRSTIGQCLTDTLDDLVQNGTLSPDHAIKILIQFDKSVTEALETKVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFILQDALFKSE+ QE VGRVKIVACDSKLL Q
Sbjct: 61 GHLHTYRFCDNVWTFILQDALFKSEDKQENVGRVKIVACDSKLLGQ 106
>gi|357135021|ref|XP_003569111.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Brachypodium distachyon]
Length = 106
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/106 (86%), Positives = 99/106 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVTVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL DA FK+EE E VG+VKIVACDSKLL+Q
Sbjct: 61 GHLHTYRFCDNVWTFILTDAQFKNEETTEQVGKVKIVACDSKLLTQ 106
>gi|270000376|gb|ACZ58035.1| TFIIA small subunity [Saccharum hybrid cultivar SP80-3280]
Length = 106
Score = 194 bits (492), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 98/106 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGTL+PELAIQVL+QFDKSMT+ALE QVKSKV+IK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVNNGTLSPELAIQVLIQFDKSMTDALENQVKSKVNIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVACDSKLL Q
Sbjct: 61 GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLGQ 106
>gi|242089165|ref|XP_002440415.1| hypothetical protein SORBIDRAFT_09g000610 [Sorghum bicolor]
gi|241945700|gb|EES18845.1| hypothetical protein SORBIDRAFT_09g000610 [Sorghum bicolor]
Length = 106
Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 92/106 (86%), Positives = 98/106 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMT+ALE QVKSKV+IK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVNIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL DA FK+EE E VG+VKIVACDSKLL Q
Sbjct: 61 GHLHTYRFCDNVWTFILTDASFKNEETTEQVGKVKIVACDSKLLGQ 106
>gi|195621538|gb|ACG32599.1| transcription initiation factor IIA gamma chain [Zea mays]
Length = 106
Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 97/106 (91%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGT +PELAIQVLVQFDKSMT+ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSNGTXSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL DA FK+EE E VG+VKIVACDSKLL Q
Sbjct: 61 GHLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSKLLGQ 106
>gi|55585039|gb|AAV53715.1| transcription factor IIA gamma subunit [Oryza sativa Indica Group]
Length = 106
Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 98/106 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVL QFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVACDSKLLSQ
Sbjct: 61 GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ 106
>gi|242055747|ref|XP_002457019.1| hypothetical protein SORBIDRAFT_03g047230 [Sorghum bicolor]
gi|241928994|gb|EES02139.1| hypothetical protein SORBIDRAFT_03g047230 [Sorghum bicolor]
Length = 109
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/104 (85%), Positives = 98/104 (94%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIG CLTETLDE+V +G ++PELAIQVLVQFDKSMTEALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGTCLTETLDELVSSGAVSPELAIQVLVQFDKSMTEALEMQVKSKVNVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLL 104
GHLHTYRFCDNVWTFIL DA FKSEE+QET+G+VKIVACDSKLL
Sbjct: 61 GHLHTYRFCDNVWTFILTDATFKSEEIQETLGKVKIVACDSKLL 104
>gi|106879581|emb|CAJ38374.1| transcription initiation factor [Plantago major]
Length = 114
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/106 (84%), Positives = 99/106 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLD+MV +G L+PELAIQVL+QFDKSMTEALE++VKSKVSIK
Sbjct: 9 MATFELYRRSTIGMCLTETLDQMVSSGVLSPELAIQVLIQFDKSMTEALESEVKSKVSIK 68
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFI+Q+A KSEE QETV VKIVACDSKLL+Q
Sbjct: 69 GHLHTYRFCDNVWTFIVQNAQLKSEEGQETVETVKIVACDSKLLTQ 114
>gi|115442493|ref|NP_001045526.1| Os01g0970500 [Oryza sativa Japonica Group]
gi|57899208|dbj|BAD87357.1| putative transcription factor IIA small subunit [Oryza sativa
Japonica Group]
gi|57899877|dbj|BAD87713.1| putative transcription factor IIA small subunit [Oryza sativa
Japonica Group]
gi|113535057|dbj|BAF07440.1| Os01g0970500 [Oryza sativa Japonica Group]
gi|125529275|gb|EAY77389.1| hypothetical protein OsI_05377 [Oryza sativa Indica Group]
gi|125601520|gb|EAZ41096.1| hypothetical protein OsJ_25588 [Oryza sativa Japonica Group]
Length = 109
Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 97/104 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLL 104
GHLHTYRFCDNVWTFIL DA+FK+EE+ ET+ +VKIVACDSKLL
Sbjct: 61 GHLHTYRFCDNVWTFILTDAIFKNEEITETINKVKIVACDSKLL 104
>gi|116784069|gb|ABK23201.1| unknown [Picea sitchensis]
Length = 106
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 97/106 (91%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYR+STIG CLTETLDE+V NGTL+PE AIQVLVQFDKSM EALETQVKSKV+IK
Sbjct: 1 MATFELYRKSTIGTCLTETLDELVSNGTLSPEHAIQVLVQFDKSMAEALETQVKSKVTIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTF+LQ+A FK E++QE RVKIVACDSK+L+Q
Sbjct: 61 GHLHTYRFCDNVWTFLLQNATFKGEDIQENAVRVKIVACDSKILTQ 106
>gi|165874602|gb|ABY68181.1| transcription factor IIA gamma subunit [Oryza officinalis]
gi|165874606|gb|ABY68183.1| transcription factor IIA gamma subunit [Oryza brachyantha]
gi|165874608|gb|ABY68184.1| transcription factor IIA gamma subunit [Oryza granulata]
gi|165874610|gb|ABY68185.1| transcription factor IIA gamma subunit [Leersia tisserantii]
Length = 99
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/99 (87%), Positives = 92/99 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
GHLHTYRFCDNVWTFIL +A FK+EE E VG+VKIVAC
Sbjct: 61 GHLHTYRFCDNVWTFILTEAQFKNEETTEQVGKVKIVAC 99
>gi|165874600|gb|ABY68180.1| transcription factor IIA gamma subunit [Oryza punctata]
Length = 99
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 93/99 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
GHLHTYRFCDNVWTFIL +A FK+E+ E+VG+VKIVAC
Sbjct: 61 GHLHTYRFCDNVWTFILTEAQFKNEDTTESVGKVKIVAC 99
>gi|165874604|gb|ABY68182.1| transcription factor IIA gamma subunit [Oryza australiensis]
Length = 99
Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/99 (86%), Positives = 92/99 (92%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
GHLHTYRFCDNVWTFIL +A FK+E+ E VG+VKIVAC
Sbjct: 61 GHLHTYRFCDNVWTFILTEAQFKNEDTTEQVGKVKIVAC 99
>gi|1429228|emb|CAA67369.1| TFIIA [Arabidopsis thaliana]
Length = 106
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/106 (82%), Positives = 96/106 (90%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMVQ+GT++PELAIQVLVQFDKSMTEALE+QVK+KVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVQSGTVSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLH + DNVWTFILQDA+FKS + QE V VKIVA DSKLL+Q
Sbjct: 61 GHLHHLQVRDNVWTFILQDAMFKSYDRQENVSPVKIVASDSKLLTQ 106
>gi|190612384|gb|ACE80626.1| TFIIAgamma [Cyperus rotundus]
Length = 87
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/87 (91%), Positives = 83/87 (95%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV NGTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFILQDA FKS+E+QETV R
Sbjct: 61 RFCDNVWTFILQDAAFKSDEIQETVNR 87
>gi|165874624|gb|ABY68192.1| transcription factor IIA gamma subunit [Leersia tisserantii]
Length = 91
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 85/91 (93%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGGLSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL+DA FK+EE+ ET+G+VKIVA
Sbjct: 61 FCDNVWTFILKDATFKNEEITETIGKVKIVA 91
>gi|118487018|gb|ABK95340.1| unknown [Populus trichocarpa]
Length = 84
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/84 (89%), Positives = 81/84 (96%)
Query: 23 MVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALF 82
MVQNGTL+PELA QVLVQFDKSMTEALET+VKSKVSIKGHLHTYRFCDNVWTFILQDA+F
Sbjct: 1 MVQNGTLSPELAFQVLVQFDKSMTEALETKVKSKVSIKGHLHTYRFCDNVWTFILQDAMF 60
Query: 83 KSEELQETVGRVKIVACDSKLLSQ 106
K+E+ QE VGRVKIVACDSKLL+Q
Sbjct: 61 KNEDTQENVGRVKIVACDSKLLTQ 84
>gi|165874612|gb|ABY68186.1| transcription factor IIA gamma subunit [Oryza rufipogon]
Length = 91
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 84/91 (92%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL DA+FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILTDAIFKNEEITETINKVKIVA 91
>gi|165874620|gb|ABY68190.1| transcription factor IIA gamma subunit [Oryza brachyantha]
Length = 91
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 84/91 (92%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL+DA FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILRDATFKNEEMTETINKVKIVA 91
>gi|190612376|gb|ACE80622.1| TFIIAgamma [Rhynchoryza subulata]
Length = 87
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL +A FK+EE E VG+
Sbjct: 61 RFCDNVWTFILTEAAFKNEETTEQVGK 87
>gi|165874616|gb|ABY68188.1| transcription factor IIA gamma subunit [Oryza officinalis]
Length = 91
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL DA FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILTDATFKNEEITETINKVKIVA 91
>gi|190612370|gb|ACE80619.1| TFIIAgamma [Leersia perrieri]
gi|190612374|gb|ACE80621.1| TFIIAgamma [Potamophila parviflora]
gi|190612380|gb|ACE80624.1| TFIIAgamma [Luziola fluitans]
Length = 87
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL +A FK+EE E VG+
Sbjct: 61 RFCDNVWTFILTEAQFKNEETTEQVGK 87
>gi|190612378|gb|ACE80623.1| TFIIAgamma [Hygroryza aristata]
Length = 87
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/87 (86%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL +A FK+EE E VG+
Sbjct: 61 RFCDNVWTFILTEANFKNEETTEQVGK 87
>gi|190612364|gb|ACE80616.1| TFIIAgamma [Ehrharta erecta]
Length = 87
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 81/87 (93%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLD+MV +G L+PELAIQVLVQFDKSMT+ALE QVKSKV++KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTDALENQVKSKVTVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ETVG+
Sbjct: 61 RFCDNVWTFILTDATFKNEEITETVGK 87
>gi|190612358|gb|ACE80613.1| TFIIAgamma [Rhynchoryza subulata]
Length = 87
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKVS+KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ETVG+
Sbjct: 61 RFCDNVWTFILTDATFKNEEITETVGK 87
>gi|165874622|gb|ABY68191.1| transcription factor IIA gamma subunit [Oryza granulata]
Length = 91
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV +KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVIVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL+DA FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILKDATFKNEEITETISKVKIVA 91
>gi|165874614|gb|ABY68187.1| transcription factor IIA gamma subunit [Oryza punctata]
Length = 91
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 83/91 (91%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL D +FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILTDPIFKNEEITETINKVKIVA 91
>gi|190612368|gb|ACE80618.1| TFIIAgamma [Phyllostachys aurea]
Length = 87
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 81/87 (93%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIG+CLTETLD+MV +GTL+PELAIQVLVQFDKSMT+ALE QVKSKVS+KGHLHTY
Sbjct: 1 YRRSTIGLCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVSVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ETV +
Sbjct: 61 RFCDNVWTFILTDAPFKNEEISETVSK 87
>gi|190612362|gb|ACE80615.1| TFIIAgamma [Luziola fluitans]
Length = 87
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/87 (82%), Positives = 82/87 (94%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV +GTL+P+LAIQVLVQFDKSMT+ALE QVKSKV++KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVLSGTLSPDLAIQVLVQFDKSMTDALEHQVKSKVTVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ET+G+
Sbjct: 61 RFCDNVWTFILTDATFKNEEIAETIGK 87
>gi|165874618|gb|ABY68189.1| transcription factor IIA gamma subunit [Oryza australiensis]
Length = 91
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 83/91 (91%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYR 67
RRSTIG CLT+TLD+MV +GTL PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTYR
Sbjct: 1 RRSTIGTCLTDTLDDMVSSGTLCPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTYR 60
Query: 68 FCDNVWTFILQDALFKSEELQETVGRVKIVA 98
FCDNVWTFIL+DA FK+EE+ ET+ +VKIVA
Sbjct: 61 FCDNVWTFILKDATFKNEEITETINKVKIVA 91
>gi|190612382|gb|ACE80625.1| TFIIAgamma [Ehrharta erecta]
Length = 87
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 79/87 (90%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV GTL+PELAIQVLVQFDKSMTEALE +VKSKV+IKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSTGTLSPELAIQVLVQFDKSMTEALENEVKSKVTIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE E VG+
Sbjct: 61 RFCDNVWTFILTDAQFKNEETTEQVGK 87
>gi|190612372|gb|ACE80620.1| TFIIAgamma [Chikusichloa aquatica]
Length = 87
Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/87 (85%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIKGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL +A FK+EE + VG+
Sbjct: 61 RFCDNVWTFILTEAQFKNEENTDQVGK 87
>gi|190612354|gb|ACE80611.1| TFIIAgamma [Chikusichloa aquatica]
Length = 87
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKVS+KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ET+ +
Sbjct: 61 RFCDNVWTFILTDATFKNEEIAETISK 87
>gi|190612356|gb|ACE80612.1| TFIIAgamma [Potamophila parviflora]
Length = 87
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKVS+KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ET+ +
Sbjct: 61 RFCDNVWTFILTDATFKNEEIAETINK 87
>gi|190612360|gb|ACE80614.1| TFIIAgamma [Hygroryza aristata]
Length = 87
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLTETLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKVS+KGHLHTY
Sbjct: 1 YRRSTIGMCLTETLDDMVSSGALSPELAIQVLVQFDKSMTNALEHQVKSKVSVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL DA FK+EE+ ET+ +
Sbjct: 61 RFCDNVWTFILTDATFKNEEITETISK 87
>gi|168032348|ref|XP_001768681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680180|gb|EDQ66619.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 89/106 (83%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MA++ELYR+S+IGM LT+ LDE+V NGT++P LA++VL+QFD+SM EA T+VK+K S K
Sbjct: 1 MASYELYRKSSIGMSLTDALDELVTNGTISPLLAVKVLMQFDRSMNEAFSTKVKAKTSFK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL+ A FK++ V RVKIVACD+K+L++
Sbjct: 61 GHLHTYRFCDNVWTFILEQASFKTDNDVTAVDRVKIVACDAKILAR 106
>gi|190612366|gb|ACE80617.1| TFIIAgamma [Phyllostachys aurea]
Length = 87
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 79/87 (90%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIG+CLTETLD+MV +GTL+PELAIQVLVQFDKSMT+ALE QVKSKVS KGHLHTY
Sbjct: 1 YRRSTIGLCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVSFKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL+DA FK EE+ E V +
Sbjct: 61 RFCDNVWTFILKDATFKYEEISEKVSK 87
>gi|168010137|ref|XP_001757761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691037|gb|EDQ77401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 90/106 (84%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MA++ELYR+S+IG+ LT+ LDE+V NGT++P LA++VL+QFD+SM EAL T+VK K S K
Sbjct: 1 MASYELYRKSSIGVSLTDALDELVTNGTISPLLAVKVLMQFDRSMNEALSTKVKVKTSFK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYRFCDNVWTFIL++A FK++ V RVKIVACD+K+L++
Sbjct: 61 GHLHTYRFCDNVWTFILENASFKTDNDVTAVDRVKIVACDAKILAR 106
>gi|190612352|gb|ACE80610.1| TFIIAgamma [Leersia perrieri]
Length = 87
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 80/87 (91%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
YRRSTIGMCLT+TLD+MV +G L+PELAIQVLVQFDKSMT ALE QVKSKV++KGHLHTY
Sbjct: 1 YRRSTIGMCLTDTLDDMVSSGGLSPELAIQVLVQFDKSMTSALEHQVKSKVTVKGHLHTY 60
Query: 67 RFCDNVWTFILQDALFKSEELQETVGR 93
RFCDNVWTFIL+DA FK+EE+ ET+ +
Sbjct: 61 RFCDNVWTFILKDATFKNEEITETINK 87
>gi|302792214|ref|XP_002977873.1| hypothetical protein SELMODRAFT_233015 [Selaginella moellendorffii]
gi|300154576|gb|EFJ21211.1| hypothetical protein SELMODRAFT_233015 [Selaginella moellendorffii]
Length = 108
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 88/106 (83%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M + ELYR+STIG+ LT+ LDEMV NG++ P LA++VL+QFDKSM EAL+++V++K + K
Sbjct: 1 MGSLELYRKSTIGIGLTDALDEMVTNGSIPPLLAVRVLMQFDKSMGEALQSKVRAKTTFK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHL TYRFCDN+W F+L++A FK++ + V RVKIVACD+K+L++
Sbjct: 61 GHLRTYRFCDNIWIFLLENATFKTDNEVQHVDRVKIVACDAKILAR 106
>gi|281205083|gb|EFA79276.1| transcription initiation factor IIA gamma chain [Polysphondylium
pallidum PN500]
Length = 131
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 79/106 (74%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M +ELYRRSTIG LT+TLDE+V N ++ +L +VL+QFDKS+ EAL VKSK S K
Sbjct: 19 MRYYELYRRSTIGEALTDTLDELVTNQYISQQLYDKVLLQFDKSINEALADTVKSKASFK 78
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
G LHTYRFCDNVWTFIL++A FK+E V VKIVACD+ + ++
Sbjct: 79 GDLHTYRFCDNVWTFILENAEFKTENETIKVDNVKIVACDANISNE 124
>gi|384486650|gb|EIE78830.1| hypothetical protein RO3G_03535 [Rhizopus delemar RA 99-880]
gi|384497972|gb|EIE88463.1| hypothetical protein RO3G_13174 [Rhizopus delemar RA 99-880]
Length = 110
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 81/99 (81%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IGM LT++LDE++Q+G + P+LA++VL+ FD+S++EAL VK+K +IKGHL
Sbjct: 7 YELYRRSSIGMALTDSLDELIQSGHINPQLAMRVLMTFDRSISEALSQIVKNKATIKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
HTYRFCD VWTFI+++ FK ++ + +VKIVAC+ K
Sbjct: 67 HTYRFCDEVWTFIVENPNFKFDQELVSADKVKIVACNVK 105
>gi|328772652|gb|EGF82690.1| hypothetical protein BATDEDRAFT_9833 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 76/98 (77%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++GM LT+TLDE++Q+G + P+ A++VL QFD S EAL ++VKSK +IKGHL
Sbjct: 5 YELYRRSSLGMALTDTLDELIQDGHIDPQTAMKVLSQFDLSFAEALHSKVKSKATIKGHL 64
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
H YR CD+VWTFI+++ F+ E T ++K+VAC +
Sbjct: 65 HIYRLCDDVWTFIVENPAFRFENETVTANKIKVVACKA 102
>gi|330794689|ref|XP_003285410.1| transcription initiation factor IIA gamma chain [Dictyostelium
purpureum]
gi|325084680|gb|EGC38103.1| transcription initiation factor IIA gamma chain [Dictyostelium
purpureum]
Length = 116
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 78/103 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G LT+TL+E++ N ++ L ++L QFDKS+ EAL VKSK + KG+L
Sbjct: 10 YELYRRSSVGEALTDTLEELLMNQYISSSLYQKILSQFDKSINEALSNTVKSKTTFKGNL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
HTYRFCDNVWTFIL +A FK++ ++ V RVKIVACD+ + Q
Sbjct: 70 HTYRFCDNVWTFILDNASFKTDGVEVKVKRVKIVACDANVQDQ 112
>gi|328849869|gb|EGF99042.1| hypothetical protein MELLADRAFT_73472 [Melampsora larici-populina
98AG31]
Length = 122
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 75/98 (76%), Gaps = 2/98 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
FELYRRS++G+ LT+ LDE++Q+G + P+LA+ VL QFDKS + L TQ++SK IKGHL
Sbjct: 14 FELYRRSSVGLALTDALDELIQSGHINPQLALTVLKQFDKSASHVLSTQLRSKCQIKGHL 73
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVAC 99
TYR CD VWTF+L D++FK E ++ V RVKIVAC
Sbjct: 74 STYRLCDEVWTFLLHDSIFKLEGGEQVGPVKRVKIVAC 111
>gi|443692949|gb|ELT94433.1| hypothetical protein CAPTEDRAFT_146781 [Capitella teleta]
Length = 105
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 78/100 (78%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L E+LD+++Q G +TPELA++VL QFD+++ AL T+VK+KV+ KGH
Sbjct: 2 SYQLYRNTTLGNTLQESLDDLIQCGQITPELALKVLQQFDEAINTALSTRVKNKVTFKGH 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D FK TV +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLDDVEFKEVSELVTVDKVKIVACDGK 101
>gi|303274388|ref|XP_003056515.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462599|gb|EEH59891.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 111
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 6/111 (5%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M +ELYRRST+GM LT+ LDEMV N LTP +A++VLVQFDK M+EAL +VK+K + K
Sbjct: 1 MTYYELYRRSTLGMTLTDALDEMVTNFELTPSVAMKVLVQFDKCMSEALN-RVKAKTTFK 59
Query: 61 GHLHTYRFCDNVWTFILQDALFKS-----EELQETVGRVKIVACDSKLLSQ 106
G+L TYRFCDNVWTFIL D F + E T+ ++KIVACD + S
Sbjct: 60 GNLGTYRFCDNVWTFILSDVTFSTSGAGGEIATATLDKLKIVACDGRTTSD 110
>gi|409076553|gb|EKM76924.1| hypothetical protein AGABI1DRAFT_115570 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426194516|gb|EKV44447.1| hypothetical protein AGABI2DRAFT_194488 [Agaricus bisporus var.
bisporus H97]
Length = 114
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG-RVKIVAC 99
HLHTYR CD+VWTFI+++A FK E ++ R+KI+AC
Sbjct: 64 HLHTYRLCDDVWTFIVKNASFKMESNEQVAAQRIKIIAC 102
>gi|409047469|gb|EKM56948.1| hypothetical protein PHACADRAFT_254362 [Phanerochaete carnosa
HHB-10118-sp]
Length = 113
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 79/100 (79%), Gaps = 3/100 (3%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ NG++TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITNGSITPQLAMKVLQQFDKSLADTMVKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVAC 99
HLHTYR CD+VWTFI+++A FK E E V ++KIVAC
Sbjct: 64 HLHTYRLCDDVWTFIVKNASFKMES-NEMVATPKIKIVAC 102
>gi|389746506|gb|EIM87686.1| transcription initiation factor IIA gamma subunit [Stereum hirsutum
FP-91666 SS1]
Length = 113
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMIKQVKNKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
HLHTYR CD+VWTFI++DA FK E + T ++KI+AC
Sbjct: 64 HLHTYRLCDDVWTFIVKDASFKMESNEMVTAPKIKIIAC 102
>gi|331227790|ref|XP_003326563.1| transcription initiation factor TFIIA small subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|309305553|gb|EFP82144.1| transcription initiation factor TFIIA small subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 122
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 77/99 (77%), Gaps = 4/99 (4%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
FELYRRS++G+ LT+ LDE++Q+G + P+LA+ VL QFDKS ++ L TQ++SK ++KGHL
Sbjct: 13 FELYRRSSLGLALTDALDELIQSGHINPQLALTVLKQFDKSASQVLSTQLRSKCTVKGHL 72
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG---RVKIVAC 99
TYR CD VWTF+L D+ FK E ++VG RVKIVAC
Sbjct: 73 STYRLCDEVWTFLLHDSTFKLEG-GDSVGPVKRVKIVAC 110
>gi|255070253|ref|XP_002507208.1| predicted protein [Micromonas sp. RCC299]
gi|226522483|gb|ACO68466.1| predicted protein [Micromonas sp. RCC299]
Length = 111
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MA +ELYRRST+GM LT+ LDEMV G LTP +A++VL QFDK M AL++ +K+K+S K
Sbjct: 1 MAYYELYRRSTLGMTLTDALDEMVTTGELTPTIAMKVLAQFDKFMNGALKS-LKTKLSFK 59
Query: 61 GHLHTYRFCDNVWTFILQDALFK-----SEELQETVGRVKIVACDSK 102
G L TYRFCDNVWTF+L++ F ++ +V R+KIVACD K
Sbjct: 60 GDLETYRFCDNVWTFMLKNVTFDVSGPGGDKRAASVDRLKIVACDGK 106
>gi|406867008|gb|EKD20047.1| transcription initiation factor IIA gamma chain [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 115
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IGM LT+TLD+++ + + P+LA+++L FD+S+TE L +VK++++ KGHL
Sbjct: 9 YELYRRSSIGMALTDTLDDLISDRRIEPQLAMKILANFDRSITEVLADKVKARLTFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF+++D FK E +TV +VKIV+C+SK
Sbjct: 69 DTYRFCDEVWTFLIKDVTFKMENSSQTVQADKVKIVSCNSK 109
>gi|299739857|ref|XP_002910251.1| hypothetical protein CC1G_10965 [Coprinopsis cinerea okayama7#130]
gi|298403974|gb|EFI26757.1| hypothetical protein CC1G_10965 [Coprinopsis cinerea okayama7#130]
Length = 113
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVAC 99
HLHTYR CD+VWTFI+++A FK E E V R+KI+AC
Sbjct: 64 HLHTYRLCDDVWTFIVKNASFKMES-NEIVNAPRIKIIAC 102
>gi|66504876|ref|XP_623063.1| PREDICTED: transcription initiation factor IIA subunit 2 [Apis
mellifera]
Length = 112
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|332022639|gb|EGI62927.1| Transcription initiation factor IIA subunit 2 [Acromyrmex
echinatior]
Length = 112
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|380014682|ref|XP_003691351.1| PREDICTED: transcription initiation factor IIA subunit 2-like [Apis
florea]
Length = 112
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|307190250|gb|EFN74357.1| Transcription initiation factor IIA subunit 2 [Camponotus
floridanus]
Length = 112
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAIVDKVKIVACDGKTLD 105
>gi|429238584|ref|NP_587763.2| transcription factor TFIIA complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|395398472|sp|O74948.2|T2AG_SCHPO RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|347834421|emb|CAA19263.2| transcription factor TFIIA complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 109
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 77/99 (77%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+ LD+++ G ++P+LA++VL FDKSMTEAL +V+S+++ KGHL
Sbjct: 5 YELYRRSSIGISLTDALDDLISQGKISPQLAMKVLFNFDKSMTEALAEKVRSRLTFKGHL 64
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
TYRFCD VWTFI+++ F+ + T +++IVAC ++
Sbjct: 65 DTYRFCDEVWTFIIKNPSFRFDNETVTSNKIRIVACATR 103
>gi|395331388|gb|EJF63769.1| transcription initiation factor IIA gamma subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 113
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADIMVKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
HLHTYR CD+VWTFI+++ FK E ++ + ++KIVAC
Sbjct: 64 HLHTYRLCDDVWTFIVKNPTFKMESNEQVSAPKIKIVAC 102
>gi|392588001|gb|EIW77334.1| transcription initiation factor IIA gamma subunit [Coniophora
puteana RWD-64-598 SS2]
Length = 113
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K S+KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTSLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSE-ELQETVGRVKIVAC 99
HL TYR CD+VWTFI+++ FK E Q T R+KI+AC
Sbjct: 64 HLRTYRLCDDVWTFIIKNPTFKMEGNEQVTAERIKIIAC 102
>gi|383847845|ref|XP_003699563.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Megachile rotundata]
Length = 112
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LA++VL+QFDK++ +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLALKVLLQFDKAINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAMVDKVKIVACDGKTLD 105
>gi|121543873|gb|ABM55601.1| transcription initiation factor IIA gamma chain-like protein
[Maconellicoccus hirsutus]
Length = 115
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
T++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ AL T+VK+++S K G
Sbjct: 2 TYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKTINNALATKVKTRISFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L TYRFCDNVWTF+L D F+ V +VKIVACD K ++
Sbjct: 62 KLSTYRFCDNVWTFMLNDVEFREVAELAKVEKVKIVACDGKNMN 105
>gi|336375000|gb|EGO03336.1| hypothetical protein SERLA73DRAFT_174781 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387965|gb|EGO29109.1| hypothetical protein SERLADRAFT_456442 [Serpula lacrymans var.
lacrymans S7.9]
Length = 113
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMIKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
HLHTYR CD+VWTFI+++ FK E + + R+KI+AC
Sbjct: 64 HLHTYRLCDDVWTFIVKNPSFKMESNEMVSAPRIKIIAC 102
>gi|307208051|gb|EFN85582.1| Transcription initiation factor IIA subunit 2 [Harpegnathos
saltator]
Length = 170
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK + +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKVINQALATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAMVDKVKIVACDGK 102
>gi|114052188|ref|NP_001040463.1| transcription initiation factor IIA gamma chain [Bombyx mori]
gi|95102994|gb|ABF51438.1| transcription initiation factor IIA gamma chain [Bombyx mori]
Length = 108
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +TIG L E+LDE++Q G +TP LA++VL+QFDKS+ +AL +VKS+++ K G
Sbjct: 2 SYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGK 102
>gi|392562446|gb|EIW55626.1| transcription initiation factor IIA gamma subunit [Trametes
versicolor FP-101664 SS1]
Length = 113
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KG
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLKG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVAC 99
HLHTYR CD+VWTFI+++ FK E + + ++KIVAC
Sbjct: 64 HLHTYRLCDDVWTFIVKNPQFKMESNEVVSAPKIKIVAC 102
>gi|226372334|gb|ACO51792.1| Transcription initiation factor IIA subunit 2 [Rana catesbeiana]
Length = 109
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ + P+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQINPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ VG+VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVGKVKIVACDGK 101
>gi|393219983|gb|EJD05469.1| transcription initiation factor IIA, gamma subunit [Fomitiporia
mediterranea MF3/22]
Length = 115
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 5/102 (4%)
Query: 2 ATFELYRRST--IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI 59
A +E YR S+ IGM LT++LDE++ NG++TP+LA++VL QFDKS+ + L QVK+K ++
Sbjct: 4 AYYEFYRGSSYVIGMALTDSLDELITNGSITPQLAMKVLQQFDKSLADTLVKQVKTKTTL 63
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVAC 99
KGHLHTYR CD+VWTFI++D FK E E V ++KI+AC
Sbjct: 64 KGHLHTYRLCDDVWTFIVKDPSFKMES-NEMVSAQKIKIIAC 104
>gi|340709907|ref|XP_003393541.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Bombus terrestris]
gi|350398694|ref|XP_003485276.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Bombus impatiens]
Length = 112
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LAI+VL+QFDK++ +AL +VKS++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPQLAIKVLLQFDKAINQALAARVKSRLIFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEIAIVDKVKIVACDGKTLD 105
>gi|156545984|ref|XP_001607333.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Nasonia vitripennis]
Length = 112
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA++VL+QFDK++ +AL T+VKS++S + G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAVKVLLQFDKAINQALATRVKSRLSFRAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWTF+L D F+ V +VKIVACD K L
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVHEVAMVDKVKIVACDGKTLD 105
>gi|345570876|gb|EGX53694.1| hypothetical protein AOL_s00006g22 [Arthrobotrys oligospora ATCC
24927]
Length = 111
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+ LD+++ +G + P+LA+++L FD+S+T+ L QV +K+S KGHL
Sbjct: 7 YELYRRSSIGVALTDALDDLISDGRIAPQLAMKILSNFDRSVTDILAQQVTAKLSFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG-RVKIVACDSK 102
TYRFCD VWTF+++D FK + Q RVKIV+C+SK
Sbjct: 67 DTYRFCDEVWTFLIKDVTFKLDNSQTVQSERVKIVSCNSK 106
>gi|405964663|gb|EKC30120.1| Transcription initiation factor IIA subunit 2 [Crassostrea gigas]
Length = 107
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 76/100 (76%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L E+LDE++Q G +TP+LA++VL+QFDK++ AL +VK+++ +KG
Sbjct: 2 SYQLYRNTTLGHTLQESLDELIQGGQITPQLALKVLLQFDKAINTALANRVKNRIQLKGK 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L + F+ + +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNNVDFRDVQELAKCDKVKIVACDGK 101
>gi|358054967|dbj|GAA99034.1| hypothetical protein E5Q_05723 [Mixia osmundae IAM 14324]
Length = 585
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/98 (54%), Positives = 74/98 (75%), Gaps = 2/98 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G+ LT+ LDE++Q+G + P+LA++VL +FDK+ L + +K+K ++KGHL
Sbjct: 485 YELYRRSSLGLSLTDALDELIQSGHINPQLALKVLAKFDKAAALVLASSLKTKCTVKGHL 544
Query: 64 HTYRFCDNVWTFILQDALFKSE--ELQETVGRVKIVAC 99
TYR CD VWTFIL DA K E E+ VG+VKIVAC
Sbjct: 545 KTYRLCDEVWTFILTDATLKLEGSEVMGPVGKVKIVAC 582
>gi|357617974|gb|EHJ71090.1| transcription initiation factor IIA gamma chain [Danaus plexippus]
Length = 106
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +TIG L E+LDE++Q G +TP LA++VL+QFDKS+ AL +VKS+++ K G
Sbjct: 2 SYQLYRNTTIGNTLQESLDELIQYGQITPTLAVKVLLQFDKSINTALSNRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEVAKVDKVKIVACDGK 102
>gi|308799910|ref|XP_003074736.1| transcription factor IIA small subunit (ISS) [Ostreococcus tauri]
gi|116061276|emb|CAL51994.1| transcription factor IIA small subunit (ISS) [Ostreococcus tauri]
Length = 113
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 6/106 (5%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+ ELYRRSTIGM LT+ LDEMV +G L+P +A++VL +FD+ +T L+ K+K SIKG
Sbjct: 2 SLELYRRSTIGMSLTDALDEMVNSGVLSPSIAMKVLFEFDRCVTRVLQAS-KTKASIKGQ 60
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQET-----VGRVKIVACDSKL 103
LHTYRFC NVWTFI++DA+ + T V +K+VACD KL
Sbjct: 61 LHTYRFCGNVWTFIVEDAVVNVTDTDSTSRESRVKLLKVVACDGKL 106
>gi|185134307|ref|NP_001117838.1| transcription initiation factor IIA subunit 2 [Oncorhynchus mykiss]
gi|20140636|sp|Q90YG6.1|T2AG_ONCMY RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|14716990|emb|CAC44187.1| putative TFIIA gamma chain [Oncorhynchus mykiss]
gi|209730768|gb|ACI66253.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|209736464|gb|ACI69101.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|225703850|gb|ACO07771.1| Transcription initiation factor IIA gamma chain [Oncorhynchus
mykiss]
gi|303661137|gb|ADM16024.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|303664308|gb|ADM16138.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
Length = 108
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ KG L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|291222339|ref|XP_002731169.1| PREDICTED: general transcription factor IIA, 2, 12kDa-like
[Saccoglossus kowalevskii]
Length = 108
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 76/100 (76%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L E+LDE++Q+ ++P+LA+QVL+QFDK++ AL +VK++++ KGH
Sbjct: 2 SYQLYRNTTLGNSLQESLDELIQSQQISPQLALQVLLQFDKAINNALSHRVKNRINFKGH 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVA D K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTDLVKVEKVKIVAVDGK 101
>gi|126165282|ref|NP_001075177.1| transcription initiation factor IIA subunit 2 [Gallus gallus]
gi|121308871|dbj|BAF43532.1| general transcription facter IIA subunit 2 [Gallus gallus]
Length = 109
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGK 101
>gi|346473245|gb|AEO36467.1| hypothetical protein [Amblyomma maculatum]
gi|427786133|gb|JAA58518.1| Putative transcription initiation factor iia subunit 2
[Rhipicephalus pulchellus]
gi|442757843|gb|JAA71080.1| Putative transcription initiation factor iia gamma chain [Ixodes
ricinus]
Length = 107
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA++VL+QFDK++ AL +VK++++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSKLLSQ 106
HL TYRFCDNVWTF+L+D F+ E+QE V +VKIVACD K +Q
Sbjct: 62 HLSTYRFCDNVWTFVLKDVEFR--EVQELVKADKVKIVACDGKNQNQ 106
>gi|350537373|ref|NP_001232523.1| putative general transcription factor IIA small subunit
[Taeniopygia guttata]
gi|149410826|ref|XP_001509605.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Ornithorhynchus anatinus]
gi|197127217|gb|ACH43715.1| putative general transcription factor IIA small subunit
[Taeniopygia guttata]
gi|449270574|gb|EMC81233.1| Transcription initiation factor IIA subunit 2 [Columba livia]
Length = 109
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGK 101
>gi|158292095|ref|XP_313653.4| AGAP004370-PA [Anopheles gambiae str. PEST]
gi|157017271|gb|EAA09250.4| AGAP004370-PA [Anopheles gambiae str. PEST]
Length = 112
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
T++LYR +T+G L E+LDE++Q G +TP+LA++VLVQFDKS+ AL +VKS+V+ K
Sbjct: 2 TYQLYRNTTLGNTLQESLDELIQYGQITPQLAVRVLVQFDKSINAALSNRVKSRVTFKAA 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWT +L D F+ V +VKIVACD K +S
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFARVDKVKIVACDGKNVS 105
>gi|20140818|sp|Q9IA78.1|T2AG_PAROL RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|7340064|gb|AAF61068.1|AF220549_1 TFIIA P12 subunit [Paralichthys olivaceus]
Length = 111
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL ++V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALASRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|432958696|ref|XP_004086112.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Oryzias latipes]
Length = 109
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|126277261|ref|XP_001374038.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Monodelphis domestica]
gi|395502575|ref|XP_003755654.1| PREDICTED: transcription initiation factor IIA subunit 2
[Sarcophilus harrisii]
Length = 109
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|66472540|ref|NP_001018441.1| transcription initiation factor IIA subunit 2 [Danio rerio]
gi|63101237|gb|AAH95322.1| Zgc:110584 [Danio rerio]
gi|182891902|gb|AAI65482.1| Zgc:110584 protein [Danio rerio]
Length = 109
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|281342321|gb|EFB17905.1| hypothetical protein PANDA_012452 [Ailuropoda melanoleuca]
gi|351698418|gb|EHB01337.1| Transcription initiation factor IIA subunit 2, partial
[Heterocephalus glaber]
Length = 102
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|240274965|gb|EER38480.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus H143]
gi|325094316|gb|EGC47626.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus H88]
Length = 131
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK+++S KG
Sbjct: 25 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKARLSFKG 84
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++DA FK + Q TV +VKIV+C+SK
Sbjct: 85 HLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKVKIVSCNSK 126
>gi|344293342|ref|XP_003418382.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Loxodonta africana]
gi|395822261|ref|XP_003784440.1| PREDICTED: transcription initiation factor IIA subunit 2 [Otolemur
garnettii]
gi|417395771|gb|JAA44928.1| Putative transcription initiation factor iia subunit 2-like protein
[Desmodus rotundus]
Length = 109
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|16758064|ref|NP_445797.1| transcription initiation factor IIA subunit 2 [Rattus norvegicus]
gi|87299617|ref|NP_001034608.1| transcription initiation factor IIA subunit 2 [Mus musculus]
gi|384475645|ref|NP_001244983.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
gi|57108247|ref|XP_535502.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Canis lupus familiaris]
gi|291402911|ref|XP_002718244.1| PREDICTED: general transcription factor IIA, 2, 12kDa [Oryctolagus
cuniculus]
gi|293340271|ref|XP_002724568.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Rattus norvegicus]
gi|297696778|ref|XP_002825557.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Pongo abelii]
gi|311244636|ref|XP_003121518.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 1 [Sus scrofa]
gi|311244638|ref|XP_003121519.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 2 [Sus scrofa]
gi|311244640|ref|XP_003121520.1| PREDICTED: transcription initiation factor IIA subunit 2-like
isoform 3 [Sus scrofa]
gi|338717888|ref|XP_003363718.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Equus caballus]
gi|345795012|ref|XP_864467.2| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Canis lupus familiaris]
gi|348555455|ref|XP_003463539.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cavia porcellus]
gi|354465252|ref|XP_003495094.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cricetulus griseus]
gi|402874451|ref|XP_003901051.1| PREDICTED: transcription initiation factor IIA subunit 2 [Papio
anubis]
gi|410961134|ref|XP_003987140.1| PREDICTED: transcription initiation factor IIA subunit 2 [Felis
catus]
gi|2811071|sp|O08950.1|T2AG_RAT RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|47117190|sp|Q80ZM7.2|T2AG_MOUSE RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|2149998|gb|AAB58717.1| TFIIA small subunit [Rattus norvegicus]
gi|74146762|dbj|BAE41360.1| unnamed protein product [Mus musculus]
gi|74193485|dbj|BAE20680.1| unnamed protein product [Mus musculus]
gi|148694233|gb|EDL26180.1| mCG2938, isoform CRA_a [Mus musculus]
gi|148694236|gb|EDL26183.1| mCG2938, isoform CRA_a [Mus musculus]
gi|148694240|gb|EDL26187.1| mCG2938, isoform CRA_a [Mus musculus]
gi|149028856|gb|EDL84197.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|149028857|gb|EDL84198.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|149028858|gb|EDL84199.1| general transcription factor IIa 2, isoform CRA_c [Rattus
norvegicus]
gi|335775678|gb|AEH58652.1| transcription initiation factor IIA subunit-like protein [Equus
caballus]
gi|383417801|gb|AFH32114.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
gi|384944484|gb|AFI35847.1| transcription initiation factor IIA subunit 2 [Macaca mulatta]
Length = 109
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|241628895|ref|XP_002410024.1| transcription initiation factor IIA gamma chain, putative [Ixodes
scapularis]
gi|327488497|sp|B7Q1Q9.1|T2AG_IXOSC RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|215503287|gb|EEC12781.1| transcription initiation factor IIA gamma chain, putative [Ixodes
scapularis]
Length = 118
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 80/103 (77%), Gaps = 5/103 (4%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA++VL+QFDK++ AL +VK++++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQCGQITPHLALKVLLQFDKAINNALANRVKTRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCDNVWTF+L+D F+ E+QE V +VKIVACD K
Sbjct: 62 HLSTYRFCDNVWTFVLKDVEFR--EVQELVKADKVKIVACDGK 102
>gi|225715064|gb|ACO13378.1| Transcription initiation factor IIA subunit 2 [Esox lucius]
Length = 108
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|157167547|ref|XP_001654850.1| transcription initiation factor IIA (TFIIA), gamma chain [Aedes
aegypti]
gi|108882475|gb|EAT46700.1| AAEL002154-PA [Aedes aegypti]
Length = 107
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L ETLDE++Q G +TP LA++VLVQFDKS+ AL +VKS+V+ K
Sbjct: 2 SYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINSALSNRVKSRVTFKAA 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLS 105
L+TYRFCDNVWT +L D F+ V +VKIVACD K+ S
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFAKVDKVKIVACDGKIES 105
>gi|195977142|gb|ACG63689.1| general transcription factor IIa 2 (predicted) [Otolemur garnettii]
Length = 109
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ KG L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAVNSALAQRVRNRVNSKGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|4758486|ref|NP_004483.1| transcription initiation factor IIA subunit 2 [Homo sapiens]
gi|83035115|ref|NP_001032708.1| transcription initiation factor IIA subunit 2 [Bos taurus]
gi|55642219|ref|XP_510452.1| PREDICTED: uncharacterized protein LOC453483 isoform 4 [Pan
troglodytes]
gi|114657367|ref|XP_001173111.1| PREDICTED: uncharacterized protein LOC453483 isoform 3 [Pan
troglodytes]
gi|397515443|ref|XP_003827961.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Pan paniscus]
gi|397515445|ref|XP_003827962.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Pan paniscus]
gi|410049246|ref|XP_003952713.1| PREDICTED: uncharacterized protein LOC453483 [Pan troglodytes]
gi|426233202|ref|XP_004010606.1| PREDICTED: transcription initiation factor IIA subunit 2 [Ovis
aries]
gi|426379277|ref|XP_004056327.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Gorilla gorilla gorilla]
gi|426379279|ref|XP_004056328.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Gorilla gorilla gorilla]
gi|426379281|ref|XP_004056329.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 3
[Gorilla gorilla gorilla]
gi|1729806|sp|P52657.1|T2AG_HUMAN RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA p12 subunit; Short=TFIIA-12;
Short=TFIIAS; AltName: Full=Transcription initiation
factor IIA gamma chain; Short=TFIIA-gamma
gi|555900|gb|AAA64951.1| transcription factor IIA small 12 kDa subunit [Homo sapiens]
gi|558214|emb|CAA57357.1| smallest subunit of TFIIA [Homo sapiens]
gi|710403|gb|AAB58247.1| transcription factor TFIIA small subunit p12 [Homo sapiens]
gi|12653047|gb|AAH00287.1| General transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|12804933|gb|AAH01919.1| General transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|30583563|gb|AAP36026.1| general transcription factor IIA, 2, 12kDa [Homo sapiens]
gi|49457380|emb|CAG46989.1| GTF2A2 [Homo sapiens]
gi|60656075|gb|AAX32601.1| general transcription factor IIA 2 [synthetic construct]
gi|81674371|gb|AAI09832.1| General transcription factor IIA, 2, 12kDa [Bos taurus]
gi|119597979|gb|EAW77573.1| general transcription factor IIA, 2, 12kDa, isoform CRA_a [Homo
sapiens]
gi|119597980|gb|EAW77574.1| general transcription factor IIA, 2, 12kDa, isoform CRA_a [Homo
sapiens]
gi|123980684|gb|ABM82171.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|123995511|gb|ABM85357.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|208966358|dbj|BAG73193.1| general transcription factor IIA, 2, 12kDa [synthetic construct]
gi|296483231|tpg|DAA25346.1| TPA: general transcription factor IIA, 2, 12kDa [Bos taurus]
gi|410210114|gb|JAA02276.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410251320|gb|JAA13627.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410289436|gb|JAA23318.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|410337355|gb|JAA37624.1| general transcription factor IIA, 2, 12kDa [Pan troglodytes]
gi|431895951|gb|ELK05369.1| Transcription initiation factor IIA subunit 2 [Pteropus alecto]
gi|440899108|gb|ELR50473.1| Transcription initiation factor IIA subunit 2 [Bos grunniens mutus]
Length = 109
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|225707636|gb|ACO09664.1| Transcription initiation factor IIA gamma chain [Osmerus mordax]
Length = 109
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|38492545|pdb|1NVP|D Chain D, Human TfiiaTBPDNA COMPLEX
Length = 108
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 2 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSL 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 100
>gi|387915566|gb|AFK11392.1| transcription initiation factor IIA subunit 2 [Callorhinchus milii]
Length = 106
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGK 101
>gi|154286362|ref|XP_001543976.1| transcription initiation factor IIA gamma chain [Ajellomyces
capsulatus NAm1]
gi|261193267|ref|XP_002623039.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis SLH14081]
gi|150407617|gb|EDN03158.1| transcription initiation factor IIA gamma chain [Ajellomyces
capsulatus NAm1]
gi|225558530|gb|EEH06814.1| transcription initiation factor iia small chain [Ajellomyces
capsulatus G186AR]
gi|239588644|gb|EEQ71287.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis SLH14081]
gi|239614031|gb|EEQ91018.1| transcription initiation factor IIA gamma chain [Ajellomyces
dermatitidis ER-3]
gi|327353379|gb|EGE82236.1| hypothetical protein BDDG_05179 [Ajellomyces dermatitidis ATCC
18188]
Length = 111
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK+++S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKARLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++DA FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKVKIVSCNSK 106
>gi|410912542|ref|XP_003969748.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Takifugu rubripes]
Length = 115
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|295667541|ref|XP_002794320.1| transcription initiation factor IIA small subunit [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226286426|gb|EEH41992.1| transcription initiation factor IIA small subunit [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 111
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK+++S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVKARLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++DA FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKVKIVSCNSK 106
>gi|240849492|ref|NP_001155689.1| transcription initiation factor IIA gamma chain-like [Acyrthosiphon
pisum]
gi|239788400|dbj|BAH70884.1| ACYPI007048 [Acyrthosiphon pisum]
Length = 112
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E++DEM+Q G +TP L +++L+QFDKS+ +L T+VKSK++ K G
Sbjct: 2 SYQLYRNTTLGNTLQESIDEMIQYGQITPALGMKILLQFDKSVNNSLATRVKSKITFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+ TYRFCDNVWTF+L D FK + V ++KIVACD K
Sbjct: 62 KMDTYRFCDNVWTFMLSDVEFKETQEMAKVEKLKIVACDGK 102
>gi|296418041|ref|XP_002838653.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634608|emb|CAZ82844.1| unnamed protein product [Tuber melanosporum]
Length = 114
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 75/102 (73%), Gaps = 3/102 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS IG+ L ++LD+M+ G++TP+LA++VL FD+S+ E L +VK+ S KGHL
Sbjct: 8 YELYRRSCIGVALMDSLDDMISKGSITPQLALKVLSNFDRSIAETLANRVKANFSFKGHL 67
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE---TVGRVKIVACDSK 102
TYRFCD+VWTF++ D FK + + + ++KIV+C+SK
Sbjct: 68 DTYRFCDDVWTFLVTDVTFKFPQKNKPTISTNKIKIVSCNSK 109
>gi|301775817|ref|XP_002923329.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Ailuropoda melanoleuca]
Length = 114
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|119191810|ref|XP_001246511.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303313329|ref|XP_003066676.1| transcription initiation factor IIA gamma chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106338|gb|EER24531.1| transcription initiation factor IIA gamma chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320036397|gb|EFW18336.1| transcription initiation factor 2A gamma chain [Coccidioides
posadasii str. Silveira]
gi|392864260|gb|EAS34918.2| transcription initiation factor IIA gamma chain [Coccidioides
immitis RS]
Length = 111
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V++K+S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVRAKLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++DA FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKVKIVSCNSK 106
>gi|225680085|gb|EEH18369.1| transcription initiation factor IIA gamma chain [Paracoccidioides
brasiliensis Pb03]
gi|226291880|gb|EEH47308.1| transcription initiation factor IIA small subunit [Paracoccidioides
brasiliensis Pb18]
Length = 111
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK+++S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLAEKVKARLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++DA FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKVKIVSCNSK 106
>gi|348500470|ref|XP_003437796.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Oreochromis niloticus]
Length = 136
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELVKVDKVKIVACDGK 101
>gi|157167549|ref|XP_001654851.1| transcription initiation factor IIA (TFIIA), gamma chain [Aedes
aegypti]
gi|108882476|gb|EAT46701.1| AAEL002140-PA [Aedes aegypti]
Length = 115
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L ETLDE++Q G +TP LA++VLVQFDKS+ AL +VKS+V+ K
Sbjct: 2 SYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINSALSNRVKSRVTFKAA 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFAKVDKVKIVACDGK 102
>gi|225710538|gb|ACO11115.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
Length = 111
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG- 61
+++LYR +T+G L ETLDE++Q LTP LA++VL+QFD+S+ AL T+VK++++ K
Sbjct: 2 SYQLYRNTTLGHALRETLDELMQMQLLTPALALEVLLQFDRSINNALNTRVKTRLNFKAD 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D FK V RVKIVACD+K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAK 102
>gi|403274557|ref|XP_003929041.1| PREDICTED: transcription initiation factor IIA subunit 2 [Saimiri
boliviensis boliviensis]
Length = 109
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGAL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVEKVKIVACDGK 101
>gi|388578950|gb|EIM19281.1| transcription initiation factor iia small chain, partial [Wallemia
sebi CBS 633.66]
Length = 113
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Query: 4 FELYRRST----IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI 59
FELYRRS +G+ LT++LDE++ +G + PELA++VL QFDKSM AL QVK+K +
Sbjct: 8 FELYRRSRLVLYVGIALTDSLDELITSGHINPELAMKVLTQFDKSMMNALSNQVKNKTQM 67
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVAC 99
+GHLHTYR CD VWTFI+++ FK ++ ++KIVAC
Sbjct: 68 RGHLHTYRLCDEVWTFIVKNPTFKVDQGDLVNANKIKIVAC 108
>gi|52346124|ref|NP_001005107.1| general transcription factor IIA, 2, 12kDa [Xenopus (Silurana)
tropicalis]
gi|148226765|ref|NP_001080922.1| general transcription factor IIA, 2, 12kDa [Xenopus laevis]
gi|301632362|ref|XP_002945255.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Xenopus (Silurana) tropicalis]
gi|33312520|gb|AAQ04073.1|AF424778_1 transcription factor IIA small subunit [Xenopus laevis]
gi|34099898|gb|AAP44970.1| transcription factor IIA small subunit [Xenopus laevis]
gi|49118757|gb|AAH72888.1| TFIIAg protein [Xenopus laevis]
gi|49900038|gb|AAH77041.1| MGC89923 protein [Xenopus (Silurana) tropicalis]
gi|57033116|gb|AAH88977.1| TFIIAg protein [Xenopus laevis]
Length = 109
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ + P+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQINPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|347838088|emb|CCD52660.1| similar to transcription initiation factor IIA gamma chain
[Botryotinia fuckeliana]
Length = 115
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
Query: 4 FELYRR-STIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+ELYRR S+IGM LT+TLD+++ + P+LA+++L FD+S+TE L +VK++++ KGH
Sbjct: 8 YELYRRTSSIGMALTDTLDDLISERRIEPQLAMKILANFDRSITEVLADKVKARLTFKGH 67
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
L TYRFCD VWTF+++D FK E ++V +VKIV+C+SK
Sbjct: 68 LDTYRFCDEVWTFLIKDVTFKMENSSQSVTADKVKIVSCNSK 109
>gi|164662421|ref|XP_001732332.1| hypothetical protein MGL_0107 [Malassezia globosa CBS 7966]
gi|159106235|gb|EDP45118.1| hypothetical protein MGL_0107 [Malassezia globosa CBS 7966]
Length = 113
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+S+IG+ LT+ LDE++Q+G + P LA++VL QFDKS++E L VKSK ++KGHL
Sbjct: 9 YEFYRQSSIGIQLTDALDELIQSGHINPILAMKVLEQFDKSISETLANNVKSKGNVKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
H YR CD VWTFI+++A FK + + +V + KIVAC
Sbjct: 69 HNYRLCDEVWTFIIKNAAFKLDNGEMLSVDKAKIVAC 105
>gi|332235814|ref|XP_003267100.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 1
[Nomascus leucogenys]
gi|332235816|ref|XP_003267101.1| PREDICTED: transcription initiation factor IIA subunit 2 isoform 2
[Nomascus leucogenys]
gi|441616011|ref|XP_004088335.1| PREDICTED: transcription initiation factor IIA subunit 2 [Nomascus
leucogenys]
Length = 109
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQYQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|390480702|ref|XP_002763716.2| PREDICTED: transcription initiation factor IIA subunit 2-like
[Callithrix jacchus]
Length = 122
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGA 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELIKVEKVKIVACDGK 101
>gi|74224980|dbj|BAE38203.1| unnamed protein product [Mus musculus]
Length = 145
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAHRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|391341152|ref|XP_003744895.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Metaseiulus occidentalis]
Length = 106
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 81/103 (78%), Gaps = 5/103 (4%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L ++LDE+V +G ++ +LA++VL+QFDKS+ AL T+V+S++S K G
Sbjct: 2 SYQLYRNTTLGQTLQDSLDELVASGQISQQLAVRVLLQFDKSINNALATRVRSRLSFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCDNVWTF+L++ F+ E+QE V +VKIVACD K
Sbjct: 62 HLSTYRFCDNVWTFVLKNVEFR--EVQELVRADKVKIVACDGK 102
>gi|213513642|ref|NP_001135014.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
gi|209738024|gb|ACI69881.1| Transcription initiation factor IIA subunit 2 [Salmo salar]
Length = 108
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ KG L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTIVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|225709032|gb|ACO10362.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
gi|225711164|gb|ACO11428.1| Transcription initiation factor IIA subunit 2 [Caligus
rogercresseyi]
Length = 111
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG- 61
+++LYR +T+G L ETLDE++Q LTP LA++VL+QFD+S+ AL T+VK++++ K
Sbjct: 2 SYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINNALNTRVKTRLNFKAD 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D FK V RVKIVACD+K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFKEVSELAKVDRVKIVACDAK 102
>gi|66809053|ref|XP_638249.1| transcription initiation factor IIA gamma chain [Dictyostelium
discoideum AX4]
gi|74853880|sp|Q54ND1.1|T2AG_DICDI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|60466695|gb|EAL64746.1| transcription initiation factor IIA gamma chain [Dictyostelium
discoideum AX4]
Length = 115
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR+STIG LT+TL+E++ N ++ L ++L QFDK++ EAL VK+K + KG L
Sbjct: 8 YELYRKSTIGEALTDTLEELLINQYISNSLYQKILTQFDKTINEALSNTVKAKTTFKGSL 67
Query: 64 HTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACDSKL 103
HTYRFCD+VWTFIL++A FK+E + V RVKIVACD+ +
Sbjct: 68 HTYRFCDSVWTFILENAQFKTEANEIVKVDRVKIVACDANV 108
>gi|225704122|gb|ACO07907.1| Transcription initiation factor IIA gamma chain [Oncorhynchus
mykiss]
Length = 108
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 73/99 (73%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V ++V+ KG L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVCNRVNFKGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACDGK 101
>gi|407261929|ref|XP_003945923.1| PREDICTED: transcription initiation factor IIA subunit 2-like [Mus
musculus]
gi|148683953|gb|EDL15900.1| mCG48744 [Mus musculus]
Length = 109
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+L +QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLVLQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|405122013|gb|AFR96781.1| transcription initiation factor iia small chain [Cryptococcus
neoformans var. grubii H99]
Length = 124
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR S+IG LT+ LDE++ G + P+LA++VL QFDKS+TE L+ VK+K +IKGHL
Sbjct: 8 YEFYRGSSIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIKGHL 67
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-----TVGRVKIVACDS 101
TYR CD+VWTF+++D FK E + T ++KIVAC S
Sbjct: 68 STYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKS 110
>gi|378727559|gb|EHY54018.1| transcription initiation factor TFIIA small subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 111
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR S+IG L +T+D+++ +G + P+LA+++L FD+++ E L +VKS+++ KGHL
Sbjct: 7 YELYRGSSIGEALIDTIDDLINDGRIEPQLAMKILSNFDRAIAETLAEKVKSRLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVACDSK 102
TYRFCD+VWTF+++D FKS+ QE +VKIV+C+SK
Sbjct: 67 ETYRFCDDVWTFLVKDVRFKSDGGQEFHADKVKIVSCNSK 106
>gi|393227790|gb|EJD35455.1| transcription initiation factor IIA, gamma subunit [Auricularia
delicata TFB-10046 SS5]
Length = 115
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR S+IG+ LT+TLDE++ G ++P+LA++VL Q+DKS+ + L VKSK ++KGHL
Sbjct: 7 YEFYRGSSIGVALTDTLDELITAGKISPQLAMKVLQQYDKSLADTLNKSVKSKTTLKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSE-ELQETVGRVKIVAC 99
HTYR D+VWTF++ DA FK E + RVKIVAC
Sbjct: 67 HTYRHLDDVWTFVVTDASFKMEGNDMVSAPRVKIVAC 103
>gi|380751758|gb|AFE56220.1| xa5, partial [Oryza sativa Indica Group]
gi|380751760|gb|AFE56221.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 58/60 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
>gi|440795175|gb|ELR16311.1| transcription initiation factor iia, gamma subunit, helical domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 123
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 77/106 (72%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++ + LYR+ST+G+CL + LD++ + + +LA +VL QFDKSM+EAL T+V+++ + K
Sbjct: 9 VSVYSLYRKSTLGICLQDALDDLQERNHIGADLAQKVLEQFDKSMSEALATRVRTRFTFK 68
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
GHLHTYR DNVWTF+L+D F+S+ TV VKIVAC+ + Q
Sbjct: 69 GHLHTYRLVDNVWTFLLEDTTFRSDTDVVTVDLVKIVACEERQPGQ 114
>gi|393237932|gb|EJD45471.1| transcription initiation factor IIA, gamma subunit [Auricularia
delicata TFB-10046 SS5]
Length = 115
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S++G+ LT+ LDE++ G ++P+LA++VL Q+DKS+ +AL VK+K ++KG
Sbjct: 5 AYYEFYRGSSLGVALTDALDELITAGKISPQLAMKVLQQYDKSLADALNKTVKAKTTLKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
HLHTYR D+VWTF++ DA FK E T RVKIVAC
Sbjct: 65 HLHTYRHLDDVWTFVVTDASFKMEGNDMVTAPRVKIVAC 103
>gi|332373300|gb|AEE61791.1| unknown [Dendroctonus ponderosae]
Length = 106
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LA +VL+QFDKS+ + L T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGHTLQESLDELLQYGQITPQLACKVLLQFDKSINQMLATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ + +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVHEITKIDKVKIVACDGK 102
>gi|242020422|ref|XP_002430654.1| transcription initiation factor IIA gamma chain, putative
[Pediculus humanus corporis]
gi|212515826|gb|EEB17916.1| transcription initiation factor IIA gamma chain, putative
[Pediculus humanus corporis]
Length = 112
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LD+++Q G +TP+L ++VL+QFDKS+ AL T+VKSK++ + G
Sbjct: 2 SYQLYRNTTLGTTLQESLDDLIQYGHITPQLGMKVLLQFDKSINNALSTRVKSKLTFRAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
L+TYRFCDNVWTF L D F+ + V +VK+VACD + +++
Sbjct: 62 KLNTYRFCDNVWTFFLTDVEFREVQEIAKVDKVKVVACDGRNVAE 106
>gi|296806849|ref|XP_002844147.1| transcription initiation factor IIA gamma chain [Arthroderma otae
CBS 113480]
gi|238845449|gb|EEQ35111.1| transcription initiation factor IIA gamma chain [Arthroderma otae
CBS 113480]
Length = 111
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 77/103 (74%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK K+S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++D FK ++ Q T+ +VKIV C+SK
Sbjct: 65 HLDTYRFCDEVWTFLVKDVTFKLDD-QSTLHADKVKIVGCNSK 106
>gi|355692759|gb|EHH27362.1| General transcription factor IIA subunit 2 [Macaca mulatta]
Length = 109
Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+ L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLRNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 101
>gi|327305737|ref|XP_003237560.1| transcription initiation factor IIA gamma chain [Trichophyton
rubrum CBS 118892]
gi|326460558|gb|EGD86011.1| transcription initiation factor IIA gamma chain [Trichophyton
rubrum CBS 118892]
gi|326471422|gb|EGD95431.1| transcription initiation factor IIA gamma chain [Trichophyton
tonsurans CBS 112818]
gi|326481726|gb|EGE05736.1| transcription initiation factor IIA gamma chain [Trichophyton
equinum CBS 127.97]
Length = 111
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 77/103 (74%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK K+S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
HL TYRFCD VWTF+++D FK ++ Q T+ +VKIV C+SK
Sbjct: 65 HLDTYRFCDEVWTFLVKDVTFKLDD-QSTLHAQKVKIVGCNSK 106
>gi|413950272|gb|AFW82921.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 62
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGTL+PELAIQVLVQFDKSMT+ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|189065230|dbj|BAG34953.1| unnamed protein product [Homo sapiens]
Length = 109
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 74/99 (74%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGSL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L F+ V +VKIVACD K
Sbjct: 63 NTYRFCDNVWTFVLNYVEFREVTELIKVDKVKIVACDGK 101
>gi|170042250|ref|XP_001848846.1| transcription initiation factor IIA gamma chain [Culex
quinquefasciatus]
gi|167865753|gb|EDS29136.1| transcription initiation factor IIA gamma chain [Culex
quinquefasciatus]
Length = 109
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L ETLDE++Q G +TP LA++VLVQFDKS+ AL +VKS+V+ K
Sbjct: 2 SYQLYRNTTLGNTLQETLDELIQYGQITPALAVRVLVQFDKSINAALSNRVKSRVTFKAA 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNQVEFREVHEFAKVDKVKIVACDGK 102
>gi|115388223|ref|XP_001211617.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195701|gb|EAU37401.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 111
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ +G + P+LA+++L FDK +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINDGRIEPQLAMKILSTFDKVITEVLAEKVRARLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + T +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVNFKLDNQTMVTADKVKIVSCNSK 106
>gi|413950274|gb|AFW82923.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 74
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGTL+PELAIQVLVQFDKSMT+ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|194745812|ref|XP_001955381.1| GF18732 [Drosophila ananassae]
gi|190628418|gb|EDV43942.1| GF18732 [Drosophila ananassae]
Length = 106
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPNLAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|380751756|gb|AFE56219.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 58/60 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSI+
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIE 60
>gi|413950273|gb|AFW82922.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 78
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 58/60 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV NGTL+PELAIQVLVQFDKSMT+ALE QVKSKV++K
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSNGTLSPELAIQVLVQFDKSMTDALENQVKSKVTVK 60
>gi|195392308|ref|XP_002054801.1| GJ24638 [Drosophila virilis]
gi|194152887|gb|EDW68321.1| GJ24638 [Drosophila virilis]
Length = 107
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|195445356|ref|XP_002070290.1| GK11978 [Drosophila willistoni]
gi|194166375|gb|EDW81276.1| GK11978 [Drosophila willistoni]
Length = 106
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|242818673|ref|XP_002487164.1| transcription initiation factor iia small chain [Talaromyces
stipitatus ATCC 10500]
gi|218713629|gb|EED13053.1| transcription initiation factor iia small chain [Talaromyces
stipitatus ATCC 10500]
Length = 111
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 77/103 (74%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L V++++S KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSNFDRYVTEVLAGHVRARLSFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVTFKLDN-QTTVQADKVKIVSCNSK 106
>gi|440639671|gb|ELR09590.1| transcription initiation factor TFIIA small subunit [Geomyces
destructans 20631-21]
Length = 109
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 73/99 (73%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G L +TLDE++ + P+LA+++L FD+S+TE L+ +VK++++ KGHL
Sbjct: 9 YELYRRSSVGRTLMDTLDELIGERRIEPQLAMKILSHFDRSITEVLQDKVKARMTFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
TYRFCD VWTF+++D FK + +VKIV+C +K
Sbjct: 69 DTYRFCDEVWTFLIKDVTFKMDNTSVHADKVKIVSCGTK 107
>gi|296418474|ref|XP_002838857.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634837|emb|CAZ83048.1| unnamed protein product [Tuber melanosporum]
Length = 115
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG LT+ LD+++ G + P+LA+++L FD+ +TE L +VK+ ++ KGHL
Sbjct: 7 YELYRRSSIGTALTDALDDLISEGRIAPQLAMKILSNFDRGITEILADKVKANLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-----TVGRVKIVACDSK 102
TYRFCD VWTF+++D FK + Q + +VKIV+C+SK
Sbjct: 67 DTYRFCDEVWTFLIKDVTFKFQGGQGPNSSVSADKVKIVSCNSK 110
>gi|121716591|ref|XP_001275852.1| transcription initiation factor iia small chain [Aspergillus
clavatus NRRL 1]
gi|119404009|gb|EAW14426.1| transcription initiation factor iia small chain [Aspergillus
clavatus NRRL 1]
Length = 111
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRIITEVLADKVRARLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDSK 102
HL TYRFCD+VWTF+++D FK + T +VKIV+C+SK
Sbjct: 65 HLDTYRFCDDVWTFLIKDVTFKLDNQTTITADKVKIVSCNSK 106
>gi|195145386|ref|XP_002013677.1| GL24263 [Drosophila persimilis]
gi|198452144|ref|XP_001358646.2| GA18701 [Drosophila pseudoobscura pseudoobscura]
gi|194102620|gb|EDW24663.1| GL24263 [Drosophila persimilis]
gi|198131804|gb|EAL27787.2| GA18701 [Drosophila pseudoobscura pseudoobscura]
Length = 105
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|258573327|ref|XP_002540845.1| transcription initiation factor IIA gamma chain [Uncinocarpus
reesii 1704]
gi|237901111|gb|EEP75512.1| transcription initiation factor IIA gamma chain [Uncinocarpus
reesii 1704]
Length = 114
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 79/106 (74%), Gaps = 6/106 (5%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK- 60
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK+K+S K
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKAKLSFKA 64
Query: 61 --GHLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
GHL TYRFCD VWTF+++DA FK + Q TV ++KIV+C+SK
Sbjct: 65 SLGHLDTYRFCDEVWTFLIKDATFKLDN-QTTVHADKIKIVSCNSK 109
>gi|17738155|ref|NP_524467.1| Transcription-factor-IIA-S [Drosophila melanogaster]
gi|1711664|sp|P52656.1|T2AG_DROME RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA p14 subunit; Short=TFIIA-14;
AltName: Full=Transcription initiation factor IIA gamma
chain; Short=TFIIA-gamma; AltName: Full=dTFIIA-S
gi|662912|emb|CAA58244.1| dTFIIA-S [Drosophila melanogaster]
gi|7301064|gb|AAF56199.1| Transcription-factor-IIA-S [Drosophila melanogaster]
gi|201065449|gb|ACH92134.1| FI01012p [Drosophila melanogaster]
Length = 106
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGK 102
>gi|195054706|ref|XP_001994264.1| GH10565 [Drosophila grimshawi]
gi|193896134|gb|EDV95000.1| GH10565 [Drosophila grimshawi]
Length = 107
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPTLAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|169762810|ref|XP_001727305.1| transcription initiation factor IIA small chain [Aspergillus oryzae
RIB40]
gi|238488629|ref|XP_002375552.1| transcription initiation factor iia small chain [Aspergillus flavus
NRRL3357]
gi|83770333|dbj|BAE60466.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697940|gb|EED54280.1| transcription initiation factor iia small chain [Aspergillus flavus
NRRL3357]
gi|391866817|gb|EIT76085.1| transcription initiation factor IIA, gamma subunit [Aspergillus
oryzae 3.042]
Length = 112
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 79/103 (76%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ +G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 6 AYYELYRGSSLGLSLTDTLDDLINDGRIEPQLAMKILSTFDRVITEVLADKVRARLTFKG 65
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + Q TV +VKIV+C+SK
Sbjct: 66 HLDTYRFCDEVWTFLIKDVTFKLDN-QTTVQADKVKIVSCNSK 107
>gi|380751762|gb|AFE56222.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 57/60 (95%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMC TETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCPTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60
>gi|194910164|ref|XP_001982085.1| GG12397 [Drosophila erecta]
gi|195331428|ref|XP_002032403.1| GM23533 [Drosophila sechellia]
gi|195503049|ref|XP_002098488.1| GE23914 [Drosophila yakuba]
gi|195573267|ref|XP_002104615.1| GD18345 [Drosophila simulans]
gi|190656723|gb|EDV53955.1| GG12397 [Drosophila erecta]
gi|194121346|gb|EDW43389.1| GM23533 [Drosophila sechellia]
gi|194184589|gb|EDW98200.1| GE23914 [Drosophila yakuba]
gi|194200542|gb|EDX14118.1| GD18345 [Drosophila simulans]
Length = 106
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|71002444|ref|XP_755903.1| transcription initiation factor iia small chain [Aspergillus
fumigatus Af293]
gi|66853541|gb|EAL93865.1| transcription initiation factor iia small chain [Aspergillus
fumigatus Af293]
gi|159129958|gb|EDP55072.1| transcription initiation factor iia small chain [Aspergillus
fumigatus A1163]
Length = 111
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + T +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVTFKLDNQATVTADKVKIVSCNSK 106
>gi|255953137|ref|XP_002567321.1| Pc21g02570 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589032|emb|CAP95154.1| Pc21g02570 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 111
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FDK +TE L +V+++++ K
Sbjct: 4 VAYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILGTFDKIVTEVLADKVRARLTFK 63
Query: 61 GHLHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDSK 102
GHL TYRFCD VWTF+++D FK + T +VKIV+C+SK
Sbjct: 64 GHLDTYRFCDEVWTFLIKDVSFKLDNQTTVTADKVKIVSCNSK 106
>gi|449295948|gb|EMC91969.1| hypothetical protein BAUCODRAFT_39124 [Baudoinia compniacensis UAMH
10762]
Length = 112
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR ++IGM L +TLD+++ + P+LA+ ++ QFDKS+ L +VK++++ KGHL
Sbjct: 9 YELYRGTSIGMALADTLDDLISTRRIEPQLAMHIMAQFDKSIANVLGEKVKARLNFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACDSK 102
TYRFCD VWTFI++D FK + E RVKIVAC SK
Sbjct: 69 DTYRFCDEVWTFIIKDVNFKMDNSSTERAERVKIVACQSK 108
>gi|213405229|ref|XP_002173386.1| transcription initiation factor IIA gamma chain
[Schizosaccharomyces japonicus yFS275]
gi|212001433|gb|EEB07093.1| transcription initiation factor IIA gamma chain
[Schizosaccharomyces japonicus yFS275]
Length = 107
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 74/99 (74%), Gaps = 2/99 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+I LT+ LD+++ G ++P+LA++VL FDKSMTEAL +VK++++ KGHL
Sbjct: 5 YELYRRSSIS--LTDALDDLISQGKISPQLAMKVLFNFDKSMTEALSEKVKARLTFKGHL 62
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
TYRFCD VWTFI+++ F+ + +++IVAC ++
Sbjct: 63 DTYRFCDEVWTFIIKNPSFRFDNETVASNKIRIVACATR 101
>gi|156402941|ref|XP_001639848.1| predicted protein [Nematostella vectensis]
gi|156226979|gb|EDO47785.1| predicted protein [Nematostella vectensis]
Length = 101
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 77/100 (77%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L E+LDE++Q+ ++P+LA+QVL+ FDK++ AL +VK+K++ KGH
Sbjct: 2 SYQLYRNTTLGNSLQESLDELIQSQQISPQLALQVLLHFDKAINHALSNKVKNKITFKGH 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L++ F+ V +VK+VACD K
Sbjct: 62 LNTYRFCDNVWTFVLENVDFRDVGDVVKVDKVKVVACDGK 101
>gi|91086493|ref|XP_970803.1| PREDICTED: similar to transcription initiation factor IIA gamma
chain [Tribolium castaneum]
Length = 112
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LA +VL+ FDKS+ L T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGHTLQESLDELIQYGQITPQLACKVLLLFDKSINMTLATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ + V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFREVQEITKVDKVKIVACDGK 102
>gi|119482003|ref|XP_001261030.1| transcription initiation factor iia small chain [Neosartorya
fischeri NRRL 181]
gi|119409184|gb|EAW19133.1| transcription initiation factor iia small chain [Neosartorya
fischeri NRRL 181]
Length = 111
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + T +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVTFKLDNQTTVTADKVKIVSCNSK 106
>gi|270009805|gb|EFA06253.1| hypothetical protein TcasGA2_TC009112 [Tribolium castaneum]
Length = 112
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP+LA +VL+ FDKS+ L T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGHTLQESLDELIQYGQITPQLACKVLLLFDKSINMTLATRVKSRLTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ E+QE V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTFMLNDVEFR--EVQEITKVDKVKIVACDGK 102
>gi|225717684|gb|ACO14688.1| Transcription initiation factor IIA subunit 2 [Caligus clemensi]
Length = 110
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L ETLDE++Q LTP LA++VL+QFD+S+ AL T++K++++ K
Sbjct: 2 SYQLYRNTTLGHTLRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKAE 61
Query: 63 -LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L + FK V RVKIVACD+K
Sbjct: 62 KLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAK 102
>gi|67523451|ref|XP_659785.1| hypothetical protein AN2181.2 [Aspergillus nidulans FGSC A4]
gi|74597622|sp|Q5BB99.1|T2AG_EMENI RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|40745069|gb|EAA64225.1| hypothetical protein AN2181.2 [Aspergillus nidulans FGSC A4]
gi|259487565|tpe|CBF86336.1| TPA: transcription initiation factor iia small chain
(AFU_orthologue; AFUA_2G15680) [Aspergillus nidulans
FGSC A4]
Length = 111
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRTRLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVACDSK 102
HL TYRFCD VWTF+++D FK + Q + +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVNFKLDNQQTISADKVKIVSCNSK 106
>gi|380751752|gb|AFE56217.1| xa5, partial [Oryza sativa Indica Group]
gi|380751754|gb|AFE56218.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/60 (91%), Positives = 57/60 (95%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVL QFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60
>gi|425767434|gb|EKV06007.1| Transcription initiation factor IIA subunit 2 [Penicillium
digitatum Pd1]
gi|425769139|gb|EKV07642.1| Transcription initiation factor IIA subunit 2 [Penicillium
digitatum PHI26]
Length = 111
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 79/104 (75%), Gaps = 3/104 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FDK +TE L +V+++++ K
Sbjct: 4 VAYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILGTFDKIVTEVLADKVRARLTFK 63
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
GHL TYRFCD VWTF+++D FK + Q TV +VKIV+C+SK
Sbjct: 64 GHLDTYRFCDEVWTFLIKDVSFKLDN-QTTVSADKVKIVSCNSK 106
>gi|145251215|ref|XP_001397121.1| transcription initiation factor IIA small chain [Aspergillus niger
CBS 513.88]
gi|134082651|emb|CAK42545.1| unnamed protein product [Aspergillus niger]
gi|350636454|gb|EHA24814.1| hypothetical protein ASPNIDRAFT_48817 [Aspergillus niger ATCC 1015]
gi|358374970|dbj|GAA91558.1| transcription initiation factor iia small chain [Aspergillus
kawachii IFO 4308]
Length = 111
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 78/103 (75%), Gaps = 3/103 (2%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S++G+ LT+TLD+++ G + P+LA+++L FD+ +TE L +V+++++ KG
Sbjct: 5 AYYELYRGSSLGLSLTDTLDDLINEGRIEPQLAMKILSTFDRVITEVLADKVRARLTFKG 64
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
HL TYRFCD VWTF+++D FK + Q TV +VKIV+C+SK
Sbjct: 65 HLDTYRFCDEVWTFLIKDVTFKLDN-QTTVSADKVKIVSCNSK 106
>gi|320590491|gb|EFX02934.1| transcription initiation factor iia small chain [Grosmannia
clavigera kw1407]
Length = 111
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 78/107 (72%), Gaps = 5/107 (4%)
Query: 1 MAT---FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKV 57
MAT +ELYRRS+IG LT+TLDE+++ + P+LA++VL FD+++ E L+ +VK+++
Sbjct: 1 MATPSFYELYRRSSIGYALTDTLDELIRENRIDPQLAMKVLQNFDRAIAETLQEKVKARL 60
Query: 58 SIKGHLHTYRFCDNVWTFILQDALFKSEELQET--VGRVKIVACDSK 102
S KG L TYRFCD VWTF+++D FK E V +VKIV+C++K
Sbjct: 61 SFKGSLDTYRFCDEVWTFLIRDVQFKMEGGGAPVFVDKVKIVSCNAK 107
>gi|145343702|ref|XP_001416452.1| Transcription initiation factor IIA gamma chain, probable
[Ostreococcus lucimarinus CCE9901]
gi|144576677|gb|ABO94745.1| Transcription initiation factor IIA gamma chain, probable
[Ostreococcus lucimarinus CCE9901]
Length = 113
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 79/108 (73%), Gaps = 10/108 (9%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+ ELYRRS++GM LT+ LDE+V +G L+P +A++VL +FDKS+ +L K K S+KG
Sbjct: 2 SLELYRRSSLGMALTDALDELVISGVLSPTIAMKVLSEFDKSVCRSLRAS-KVKASVKGQ 60
Query: 63 LHTYRFCDNVWTFILQDAL-------FKSEELQETVGRVKIVACDSKL 103
LHTYRFC NVWTFI+++A+ +S+E++ V +K+VACDSKL
Sbjct: 61 LHTYRFCGNVWTFIVENAIVNIADVDVQSKEVR--VQLLKVVACDSKL 106
>gi|195109783|ref|XP_001999461.1| GI23054 [Drosophila mojavensis]
gi|193916055|gb|EDW14922.1| GI23054 [Drosophila mojavensis]
Length = 107
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+QFDKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPALAFKVLLQFDKSINIALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEFVKVDKVKIVACDGK 102
>gi|170116071|ref|XP_001889228.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635869|gb|EDR00171.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 116
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 75/103 (72%), Gaps = 6/103 (5%)
Query: 2 ATFELYRRST---IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVS 58
A +E YR S+ IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K +
Sbjct: 4 AYYEFYRGSSYVKIGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKNKTT 63
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVAC 99
+KGHL TYR CD+VWTFI++ FK E E V R+KI+AC
Sbjct: 64 LKGHLKTYRLCDDVWTFIVKSPTFKMES-NEMVSAQRIKIIAC 105
>gi|302689847|ref|XP_003034603.1| hypothetical protein SCHCODRAFT_75575 [Schizophyllum commune H4-8]
gi|300108298|gb|EFI99700.1| hypothetical protein SCHCODRAFT_75575 [Schizophyllum commune H4-8]
Length = 115
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 77/104 (74%), Gaps = 5/104 (4%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +E YR S+IGM LT++LDE++ +G +TP+LA++VL QFDKS+ + + VKSK +++G
Sbjct: 4 AYYEFYRGSSIGMALTDSLDELITSGEITPQLAMKVLQQFDKSLADTMVKHVKSKCNMRG 63
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVG----RVKIVACDS 101
L TYR CD+VWTF+++D +FK E E VG ++KI++C S
Sbjct: 64 SLRTYRLCDDVWTFVVKDPVFKLEG-GEHVGADSKKIKIISCKS 106
>gi|408393289|gb|EKJ72554.1| hypothetical protein FPSE_07191 [Fusarium pseudograminearum CS3096]
Length = 115
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VK+++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKARLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
TYRFCD VWTF++++ FK + + T +VKIV+C++K
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDSGSQSITANKVKIVSCNAK 109
>gi|302881887|ref|XP_003039854.1| hypothetical protein NECHADRAFT_50001 [Nectria haematococca mpVI
77-13-4]
gi|327488499|sp|C7ZPG2.1|T2AG_NECH7 RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|256720721|gb|EEU34141.1| hypothetical protein NECHADRAFT_50001 [Nectria haematococca mpVI
77-13-4]
Length = 114
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + + P+LA+++L FD+++TEAL+ VK+++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISDERINPQLAMKILGNFDQAITEALQKNVKARLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
TYRFCD VWTF++++ FK + + T +VKIV+C++K
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDTGGQAVTANKVKIVSCNAK 109
>gi|225718774|gb|ACO15233.1| Transcription initiation factor IIA subunit 2 [Caligus clemensi]
Length = 110
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G ETLDE++Q LTP LA++VL+QFD+S+ AL T++K++++ K
Sbjct: 2 SYQLYRNTTLGHTFRETLDELMQMQLLTPALALKVLLQFDRSINTALNTRLKTRLNFKAE 61
Query: 63 -LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L + FK V RVKIVACD+K
Sbjct: 62 KLNTYRFCDNVWTFMLNEVEFKEVSELAKVDRVKIVACDAK 102
>gi|380751764|gb|AFE56223.1| xa5, partial [Oryza sativa Indica Group]
Length = 60
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 56/60 (93%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MATFELYRRSTIGMCLTE LDEMV +GTL+PELAIQVL QFDKSMTEALE QVKSKVSIK
Sbjct: 1 MATFELYRRSTIGMCLTEALDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60
>gi|21064507|gb|AAM29483.1| RE44302p [Drosophila melanogaster]
Length = 106
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E+LDE++Q G +TP LA +VL+Q DKS+ AL +VK++V+ K G
Sbjct: 2 SYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQLDKSINNALNQRVKARVTFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWT +L D F+ V +VKIVACD K
Sbjct: 62 KLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGK 102
>gi|330935585|ref|XP_003305041.1| hypothetical protein PTT_17775 [Pyrenophora teres f. teres 0-1]
gi|311318231|gb|EFQ86978.1| hypothetical protein PTT_17775 [Pyrenophora teres f. teres 0-1]
Length = 113
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G LT+TLD ++ + P+LA+++L+ FD+++ + L +VKS+++ KGHL
Sbjct: 9 YELYRRSSLGGSLTDTLDNLITERRIEPQLAMKILLNFDRAVADVLSEKVKSRLTFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQET-VGRVKIVACDSK 102
TYRFCD+VWTFI++D FK + RVKIV+C++K
Sbjct: 69 DTYRFCDDVWTFIIKDINFKLDNTHPIHADRVKIVSCNAK 108
>gi|387019155|gb|AFJ51695.1| Transcription initiation factor IIA subunit 2 [Crotalus adamanteus]
Length = 109
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 75/100 (75%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFRGS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTEVVKVDKVKIVACDGK 101
>gi|358398952|gb|EHK48303.1| hypothetical protein TRIATDRAFT_298448 [Trichoderma atroviride IMI
206040]
Length = 115
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VKS++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILSNFDQAITEALQKNVKSRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + +V +VKIV+C++K
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDNGNVSVQADKVKIVSCNAK 109
>gi|340517640|gb|EGR47883.1| transcription initiation factor TFIIA, small subunit [Trichoderma
reesei QM6a]
Length = 115
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VKS++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILSNFDQAITEALQKNVKSRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + +V +VKIV+C++K
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDNGSVSVQADKVKIVSCNAK 109
>gi|189205949|ref|XP_001939309.1| transcription initiation factor IIA gamma chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975402|gb|EDU42028.1| transcription initiation factor IIA gamma chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 113
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G LT+TLD ++ + P+LA+++L+ FD+++ + L +VKS+++ KGHL
Sbjct: 9 YELYRRSSLGGSLTDTLDNLITERRIEPQLAMKILLNFDRAVADVLSEKVKSRLTFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQET-VGRVKIVACDSK 102
TYRFCD+VWTFI++D FK + RVKIV+C++K
Sbjct: 69 DTYRFCDDVWTFIIKDINFKLDNTHTIHADRVKIVSCNAK 108
>gi|165874598|gb|ABY68179.1| transcription factor IIA gamma subunit [Oryza rufipogon]
Length = 57
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/57 (92%), Positives = 55/57 (96%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKV 57
MATFELYRRSTIGMCLTETLDEMV +GTL+PELAIQVLVQFDKSMTEALE QVKSKV
Sbjct: 1 MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKV 57
>gi|451856469|gb|EMD69760.1| hypothetical protein COCSADRAFT_32434 [Cochliobolus sativus ND90Pr]
gi|452003041|gb|EMD95498.1| hypothetical protein COCHEDRAFT_1019248 [Cochliobolus
heterostrophus C5]
Length = 113
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G LT+TLD ++ + P+LA+++L FD+++ + L +VK++++ KGHL
Sbjct: 9 YELYRRSSLGGSLTDTLDHLITERRIEPQLAMKILANFDRAVADVLSEKVKARLTFKGHL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQET-VGRVKIVACDSK 102
TYRFCD+VWTFI++D FK + + RVKIV+C++K
Sbjct: 69 DTYRFCDDVWTFIIKDINFKLDNTHQIHADRVKIVSCNAK 108
>gi|413950275|gb|AFW82924.1| hypothetical protein ZEAMMB73_776594 [Zea mays]
Length = 62
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 45 MTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLL 104
MT+ALE QVKSKV++KGHLHTYRFCDNVWTFIL DA FK+EE E VG+VKIVACDSKLL
Sbjct: 1 MTDALENQVKSKVTVKGHLHTYRFCDNVWTFILTDASFKNEEATEQVGKVKIVACDSKLL 60
Query: 105 SQ 106
Q
Sbjct: 61 GQ 62
>gi|402083634|gb|EJT78652.1| transcription initiation factor IIA gamma chain [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 116
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG LT+ LD+++Q + P+LA++++ FD+++ E L +VKS+++ +G L
Sbjct: 10 YELYRRSSIGTALTDALDDLIQENRMDPQLAMKIVANFDRAIAETLNEKVKSRLTFRGSL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD+VWTF++++ FK + +TV ++KIV+C++K
Sbjct: 70 DTYRFCDDVWTFLIKNVSFKMDNGGQTVTADKIKIVSCNAK 110
>gi|358382624|gb|EHK20295.1| hypothetical protein TRIVIDRAFT_90125 [Trichoderma virens Gv29-8]
Length = 115
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VKS++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERIHPQLAMKILGNFDQAITEALQKNVKSRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + +V +VKIV+C++K
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDNGSVSVQADKVKIVSCNAK 109
>gi|400598059|gb|EJP65779.1| transcription initiation factor IIA [Beauveria bassiana ARSEF 2860]
Length = 115
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ V+S++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISESRIHPQLAMKILGTFDQAITEALQKNVRSRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYR CD VWTF++++ FK + +TV +VKIV+C++K
Sbjct: 69 DTYRLCDEVWTFLIKNVTFKMDNGSQTVQADKVKIVSCNAK 109
>gi|321261519|ref|XP_003195479.1| transcription initiation factor iia small chain [Cryptococcus
gattii WM276]
gi|317461952|gb|ADV23692.1| Transcription initiation factor iia small chain, putative
[Cryptococcus gattii WM276]
Length = 126
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 8/106 (7%)
Query: 4 FELYRRS---TIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+E YR S IG LT+ LDE++ G + P+LA++VL QFDKS+TE L+ VK+K +IK
Sbjct: 8 YEFYRGSRHVGIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK 67
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQE-----TVGRVKIVACDS 101
GHL TYR CD+VWTF+++D FK E + T ++KIVAC S
Sbjct: 68 GHLSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKS 113
>gi|340375130|ref|XP_003386090.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Amphimedon queenslandica]
Length = 115
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++ELYR +T+G+CL + LDEM+ + P+LA++VL QFDKS+ +AL ++V+++ + KG
Sbjct: 2 SYELYRHTTLGVCLQDALDEMIGTQQINPQLALRVLKQFDKSVGKALSSRVRTRYNFKGK 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQET--VGRVKIVACD 100
L TYR+CDNVWT ++QD K + + V +VKIVACD
Sbjct: 62 LKTYRYCDNVWTCLVQDVELKETQAADVVQVNKVKIVACD 101
>gi|58269180|ref|XP_571746.1| transcription initiation factor iia small chain [Cryptococcus
neoformans var. neoformans JEC21]
gi|134114409|ref|XP_774133.1| hypothetical protein CNBG4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819547|sp|P0CR85.1|T2AG_CRYNB RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|338819548|sp|P0CR84.1|T2AG_CRYNJ RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|50256766|gb|EAL19486.1| hypothetical protein CNBG4330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227982|gb|AAW44439.1| transcription initiation factor iia small chain, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 127
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 8/106 (7%)
Query: 4 FELYRRST---IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+E YR S IG LT+ LDE++ G + P+LA++VL QFDKS+TE L+ VK+K +IK
Sbjct: 8 YEFYRGSRHVHIGTALTDALDELITQGDIPPQLAMRVLQQFDKSLTECLQKGVKNKTTIK 67
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQE-----TVGRVKIVACDS 101
GHL TYR CD+VWTF+++D FK E + T ++KIVAC S
Sbjct: 68 GHLSTYRLCDDVWTFVVKDPQFKMEGVGAGSEMVTGSKIKIVACKS 113
>gi|389628640|ref|XP_003711973.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
70-15]
gi|327488498|sp|A4QW40.1|T2AG_MAGO7 RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
small chain
gi|351644305|gb|EHA52166.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
70-15]
gi|440474769|gb|ELQ43493.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
Y34]
gi|440487364|gb|ELQ67156.1| transcription initiation factor IIA gamma chain [Magnaporthe oryzae
P131]
Length = 116
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRR+++G+CLT+ LD+++ N + P+LA+++L FD+ + E L+ +VK+++ KG L
Sbjct: 10 YELYRRTSLGICLTDALDDLITNDRINPQLAMKILANFDRVVAETLQEKVKARLQFKGAL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
YRFCD+VWTF++++ FK + +T+ +VKIV+C++K
Sbjct: 70 DNYRFCDDVWTFVIKNINFKLDGGNQTIQADKVKIVSCNAK 110
>gi|407920278|gb|EKG13493.1| Transcription initiation factor IIA gamma subunit [Macrophomina
phaseolina MS6]
Length = 110
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E+YR+++IG+ L +TLDE++ + P+LAI+++ FDK++ + + +VK+++S KGHL
Sbjct: 7 YEIYRKTSIGLTLMDTLDELISTRRMEPQLAIKIMQNFDKALADVISEKVKARLSFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVACDS 101
TYRFCD+VWTFI++D FK + Q+ T ++KIV+ +S
Sbjct: 67 DTYRFCDDVWTFIIKDITFKMDNSQQLTADKIKIVSNNS 105
>gi|402219125|gb|EJT99199.1| transcription initiation factor IIA gamma subunit [Dacryopinax sp.
DJM-731 SS1]
Length = 123
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR ++IG L ++LDE++Q+G +TP+LA +VL+QFD++ TE L VK K S+KGHL
Sbjct: 10 YEFYRSASIGRALMDSLDELIQDGLITPQLAFKVLMQFDRATTETLNRHVKFKTSLKGHL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACDS 101
TYR CD+VWTF +++ FK E + T +VKI+A S
Sbjct: 70 STYRLCDDVWTFFVKNPSFKIEGGELVTADKVKIIAVKS 108
>gi|310795275|gb|EFQ30736.1| transcription initiation factor IIA [Glomerella graminicola M1.001]
gi|380478167|emb|CCF43747.1| transcription initiation factor IIA [Colletotrichum higginsianum]
Length = 115
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+ LD+++ + P+LA+++L FD+++TEAL+ VK++++ KG L
Sbjct: 9 YELYRRSSIGLALTDMLDDLISEERIHPQLAMKILANFDQAITEALQKSVKARLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
TYRFCD VWTF++++ FK + + T +VKIV+C++K
Sbjct: 69 STYRFCDEVWTFLIKNVQFKLDNGGQIVTADKVKIVSCNAK 109
>gi|321476568|gb|EFX87528.1| hypothetical protein DAPPUDRAFT_230366 [Daphnia pulex]
Length = 110
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-GH 62
++LYR +T+G L ETLDE++Q G +TP+LA++VLV FD++M +L +VK++++ K G
Sbjct: 3 YQLYRNTTLGNTLQETLDELIQFGQITPQLALKVLVHFDRTMNNSLAQKVKNRLTFKAGK 62
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ VKIVACD K
Sbjct: 63 LNTYRFCDNVWTFLLSDVEFRDVSELCKGETVKIVACDGK 102
>gi|169611212|ref|XP_001799024.1| hypothetical protein SNOG_08714 [Phaeosphaeria nodorum SN15]
gi|160702247|gb|EAT83882.2| hypothetical protein SNOG_08714 [Phaeosphaeria nodorum SN15]
Length = 115
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS++G LT+TLD ++ + P+LA+++L+ FDK++ + L +VK++++ KGHL
Sbjct: 8 YELYRRSSLGGALTDTLDHLITERRIEPQLAMKILINFDKAVADGLADKVKTRLTFKGHL 67
Query: 64 HTYRFCDNVWTFILQDALFKSEELQET-VGRVKIVACDSK 102
TYRFCD+VWTFI++D FK + + RVKIV+ +K
Sbjct: 68 DTYRFCDDVWTFIIKDINFKLDNSNQVHADRVKIVSLPNK 107
>gi|385306001|gb|EIF49941.1| transcription initiation factor iia gamma chain [Dekkera
bruxellensis AWRI1499]
Length = 111
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YRRST+G L + LD ++ + + P+LA++VL FD+ ++ L VKSK+S KGHL
Sbjct: 7 YEFYRRSTVGTSLADALDTLIVDQRIQPQLAMKVLANFDRVTSDNLRDIVKSKLSFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVACDSK 102
HTYRFCD+VWTF+++D K ++ V + KIVAC+SK
Sbjct: 67 HTYRFCDDVWTFVIKDVNVKFDDGHTMDVDKFKIVACNSK 106
>gi|392578165|gb|EIW71293.1| hypothetical protein TREMEDRAFT_28361 [Tremella mesenterica DSM
1558]
Length = 140
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 74/108 (68%), Gaps = 12/108 (11%)
Query: 4 FELYRRST-----IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVS 58
+E YR S+ IG LT++LDE++ G++ P+LA++VL QFDKS+TE ++ VK+K S
Sbjct: 8 YEFYRGSSFVKHFIGTALTDSLDELITQGSMPPQLAMRVLQQFDKSLTECIQKGVKTKTS 67
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQE-------TVGRVKIVAC 99
+KGHL TYR CD+VWTF+++ +FK + Q T ++KIVAC
Sbjct: 68 VKGHLSTYRLCDDVWTFVVKQPVFKMDGHQGGGGGEFVTAPKIKIVAC 115
>gi|328869993|gb|EGG18368.1| transcription initiation factor IIA gamma chain [Dictyostelium
fasciculatum]
Length = 118
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR+ST+G LT+TL+E++ + ++ L +VL QFDKSM EAL T VKSK S KG L
Sbjct: 12 YELYRKSTVGEALTDTLEELLLSQYISKNLHDKVLHQFDKSMNEALSTIVKSKYSFKGDL 71
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVACDSKL 103
HTYRFCDNVWTFI+ DA F + + TV RVK+VACD+ L
Sbjct: 72 HTYRFCDNVWTFIIDDAKFTVDSGEPITVDRVKLVACDANL 112
>gi|346323764|gb|EGX93362.1| transcription initiation factor iia small chain [Cordyceps
militaris CM01]
Length = 115
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ V+ ++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISESRIHPQLAMKILGNFDQAITEALQKNVRCRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYR CD VWTF++++ FK + TV +VKIV+C++K
Sbjct: 69 DTYRLCDEVWTFLIKNVTFKMDNGSHTVQADKVKIVSCNAK 109
>gi|402592981|gb|EJW86908.1| transcription initiation factor IIA subunit 2 [Wuchereria
bancrofti]
Length = 111
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG- 61
+++LYR +T+G+ L TLDE V++GT+TP LA VL FDK + AL +VK+KV+ K
Sbjct: 2 SYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKAD 61
Query: 62 HLHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
L YRFCDNVWTF++++ F+ ++ + V RVKIVACD+
Sbjct: 62 KLKAYRFCDNVWTFVMENVEFRDVTQPVDGVVDRVKIVACDA 103
>gi|393906374|gb|EJD74262.1| hypothetical protein LOAG_18400 [Loa loa]
Length = 111
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG- 61
+++LYR +T+G+ L TLDE V++GT+TP LA VL FDK + AL +VK+KV+ K
Sbjct: 2 SYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKAD 61
Query: 62 HLHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
L YRFCDNVWTF++++ F+ ++ + V RVKIVACD+
Sbjct: 62 KLKAYRFCDNVWTFVMENVEFRDVTQPVDGIVDRVKIVACDA 103
>gi|324508659|gb|ADY43652.1| Transcription initiation factor IIA subunit 2 [Ascaris suum]
Length = 113
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%), Gaps = 3/102 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG-H 62
+++YR +T+G+ L + LDE +Q+G +TP+LA++VL FDK++ +AL+ +VK+KV+ +
Sbjct: 3 YQMYRTTTLGVALQKALDEFIQDGLITPQLAMKVLTTFDKAINKALQVRVKNKVTFRADK 62
Query: 63 LHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDSK 102
L TYRFCDNVWTF+++ F+ S + V RVK VACD +
Sbjct: 63 LVTYRFCDNVWTFVMEGVDFREASNSFGDRVDRVKFVACDGR 104
>gi|452838716|gb|EME40656.1| hypothetical protein DOTSEDRAFT_74262 [Dothistroma septosporum
NZE10]
Length = 114
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR S+IG+ L +TLD+++ + + P+LA++++ FD+ + L +VK+++S KGHL
Sbjct: 11 YELYRGSSIGLALADTLDDLISSRRIEPQLAMKIMQHFDQHIAGVLGEKVKARMSFKGHL 70
Query: 64 HTYRFCDNVWTFILQDALFKSEE-LQETVGRVKIVACDSK 102
YRFCD VWTF+++D FK + LQ RVKIVAC SK
Sbjct: 71 DVYRFCDEVWTFVIKDVKFKMDNALQLEAERVKIVACQSK 110
>gi|195996563|ref|XP_002108150.1| hypothetical protein TRIADDRAFT_49735 [Trichoplax adhaerens]
gi|190588926|gb|EDV28948.1| hypothetical protein TRIADDRAFT_49735 [Trichoplax adhaerens]
Length = 113
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L ETL+E++Q + P+LA+ VL+QFDK++ AL ++++++S KGH
Sbjct: 2 SYQLYRNTTLGQSLQETLEELIQTQQIDPDLALIVLLQFDKTINSALANRLRTRMSFKGH 61
Query: 63 LHTYRFCDNVWTFILQDALFK---SEELQETVGRVKIVACDSK 102
L TYRFCD+VWT I+++A F+ S+ V ++K+VACD K
Sbjct: 62 LRTYRFCDSVWTLIVENAEFRETGSDTHSFKVDKLKVVACDGK 104
>gi|388855885|emb|CCF50460.1| probable transcription initiation factor iia gamma chain [Ustilago
hordei]
Length = 117
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IGM LT+ LDE++Q+G + P LA++VL +FDKS+ L VK+K +KGHL
Sbjct: 13 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKSIATNLAKNVKAKAQLKGHL 72
Query: 64 HTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVAC 99
YR C+ VWTF +++A K + EL + V +VKIVAC
Sbjct: 73 KDYRLCEEVWTFRVRNATLKLDNSELLD-VDKVKIVAC 109
>gi|346970251|gb|EGY13703.1| transcription initiation factor IIA gamma chain [Verticillium
dahliae VdLs.17]
Length = 115
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ L + LD+++ + P+LA+++L FD+++TEAL+ VK++++ KG L
Sbjct: 9 YELYRRSSIGLALMDMLDDLISAERIYPQLAMKILANFDQAITEALQKNVKARLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
TYRFCD VWTF++++ FK + + V +VKIV+C++K
Sbjct: 69 STYRFCDEVWTFLIKNVQFKLDNGGQMVSADKVKIVSCNAK 109
>gi|47209483|emb|CAF89599.1| unnamed protein product [Tetraodon nigroviridis]
Length = 84
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 64/80 (80%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q +TP+LA+QVL+QFDK++ AL +V+++V+ KG L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQTQQITPQLALQVLLQFDKAINTALANRVRNRVNFKGSL 62
Query: 64 HTYRFCDNVWTFILQDALFK 83
+TYRFCDNVWTF+L D F+
Sbjct: 63 NTYRFCDNVWTFVLNDVEFR 82
>gi|452979059|gb|EME78822.1| hypothetical protein MYCFIDRAFT_71072 [Pseudocercospora fijiensis
CIRAD86]
Length = 115
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR ++IG+ L +TLD+++ + + P+LA++++ FD+ + + L +VK++++ KGHL
Sbjct: 12 YELYRGTSIGLALADTLDDLISSRRIEPQLAMRIMANFDQHIAQVLGDKVKARMTFKGHL 71
Query: 64 HTYRFCDNVWTFILQDALFKSEE-LQETVGRVKIVACDSK 102
YRFCD VWTF+++D FK + LQ +VKIVAC SK
Sbjct: 72 DVYRFCDEVWTFVIKDVKFKMDNALQMDADKVKIVACQSK 111
>gi|302422522|ref|XP_003009091.1| transcription initiation factor IIA gamma chain [Verticillium
albo-atrum VaMs.102]
gi|261352237|gb|EEY14665.1| transcription initiation factor IIA gamma chain [Verticillium
albo-atrum VaMs.102]
Length = 115
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ L + LD+++ + P+LA+++L FD+++TEAL+ VK++++ KG L
Sbjct: 9 YELYRRSSIGLALMDMLDDLISAERIYPQLAMKILANFDQAITEALQKNVKARLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
TYRFCD VWTF++++ FK + + V +VKIV+C++K
Sbjct: 69 STYRFCDEVWTFLIKNVQFKLDNGGQLVSADKVKIVSCNAK 109
>gi|342881151|gb|EGU82099.1| hypothetical protein FOXB_07377 [Fusarium oxysporum Fo5176]
Length = 123
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 78/109 (71%), Gaps = 10/109 (9%)
Query: 4 FELYRRST--------IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKS 55
+ELYRRS+ IG+ LT+TLD+++ + + P+LA+++L FD+++TEAL+ VK+
Sbjct: 9 YELYRRSSLTNMVHCSIGLALTDTLDDLISDERINPQLAMKILSNFDQAITEALQKNVKA 68
Query: 56 KVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
++ KG L TYRFCD VWTF++++ FK + ++V +VKIV+C++K
Sbjct: 69 RLQFKGSLDTYRFCDEVWTFLIKNVTFKMDNGSQSVTANKVKIVSCNAK 117
>gi|170584870|ref|XP_001897214.1| Transcription initiation factor IIA, gamma subunit, helical domain
containing protein [Brugia malayi]
gi|158595368|gb|EDP33927.1| Transcription initiation factor IIA, gamma subunit, helical domain
containing protein [Brugia malayi]
Length = 495
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+ +++LYR +T+G+ L TLDE V++GT+TP LA VL FDK + AL +VK+KV+ K
Sbjct: 384 LMSYQLYRSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFK 443
Query: 61 GH-LHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
L YRFCDNVWTF++++ F+ ++ + V RVKIVACD+
Sbjct: 444 ADKLKAYRFCDNVWTFVMENVEFRDVTQPVDGVVDRVKIVACDA 487
>gi|443896936|dbj|GAC74279.1| transcription initiation factor IIA, gamma subunit [Pseudozyma
antarctica T-34]
Length = 114
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IGM LT+ LDE++Q+G + P LA++VL +FDKS+ L VK+K +KGHL
Sbjct: 10 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKSIATNLAKNVKAKSQLKGHL 69
Query: 64 HTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVAC 99
YR C+ VWTF +++A K + EL + V +VKIVAC
Sbjct: 70 KDYRLCEEVWTFRVRNATLKLDNAELLD-VDKVKIVAC 106
>gi|116195804|ref|XP_001223714.1| hypothetical protein CHGG_04500 [Chaetomium globosum CBS 148.51]
gi|88180413|gb|EAQ87881.1| hypothetical protein CHGG_04500 [Chaetomium globosum CBS 148.51]
Length = 114
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G+ LT+ LDE++ + + P+LA++VL QFD+ + E L+ +VKS+++ KG L
Sbjct: 9 YDLYRHGSLGVALTDALDELIGDERIDPQLAMKVLTQFDRVIAETLQEKVKSRLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + TV +VKIV+C SK
Sbjct: 69 DTYRFCDEVWTFLIRNVTFKLDNGSHTVVADKVKIVSCSSK 109
>gi|322695376|gb|EFY87185.1| transcription initiation factor IIA small subunit [Metarhizium
acridum CQMa 102]
Length = 392
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VKS++ KG L
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKSRLQFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKI 96
TYRFCD VWTF++++ FK + ++V +VKI
Sbjct: 69 DTYRFCDEVWTFLIKNVTFKMDNGSQSVQADKVKI 103
>gi|367022130|ref|XP_003660350.1| hypothetical protein MYCTH_2086212 [Myceliophthora thermophila ATCC
42464]
gi|347007617|gb|AEO55105.1| hypothetical protein MYCTH_2086212 [Myceliophthora thermophila ATCC
42464]
Length = 114
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G+ LT+ LDE++ + + P+LA++VL QFD+ + E L+ +VK++++ KG L
Sbjct: 9 YDLYRHGSLGVALTDALDELIGDERIDPQLAMKVLTQFDRVIAETLQEKVKARLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + +TV +VKIV+C SK
Sbjct: 69 DTYRFCDEVWTFLIRNVTFKLDNGSQTVQADKVKIVSCSSK 109
>gi|260948724|ref|XP_002618659.1| hypothetical protein CLUG_02119 [Clavispora lusitaniae ATCC 42720]
gi|238848531|gb|EEQ37995.1| hypothetical protein CLUG_02119 [Clavispora lusitaniae ATCC 42720]
Length = 121
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 11/112 (9%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG L + LD ++ + + P+LA+++L FD+ ++E L+T+ KSK++
Sbjct: 5 AYYELYRRSTIGSALADALDTLISDEKIQPQLAMRILNNFDRIISENLKTERGLCKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQE--------TVGRVKIVACDSK 102
KG LHTYRFCD+VWTFI+++ L K ++ +V + KIVAC+S+
Sbjct: 65 FKGDLHTYRFCDDVWTFIIKNVLIKMTDVSNNDTNDSDISVDKFKIVACNSR 116
>gi|391336955|ref|XP_003742840.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Metaseiulus occidentalis]
Length = 106
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L E LDE V +G ++ LA QVL QFDKS++ T+VKS++S K G
Sbjct: 2 SYQLYRTTTLGHTLQEALDEFVASGQISQALACQVLSQFDKSISNVFATRVKSRLSFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGR--VKIVACDSK 102
L TYRFCDNVWT +L++ F+ E+QE V VKIVAC+S+
Sbjct: 62 RLSTYRFCDNVWTLVLKNVEFR--EIQEIVKADTVKIVACESR 102
>gi|294659290|ref|XP_461652.2| DEHA2G02486p [Debaryomyces hansenii CBS767]
gi|199433848|emb|CAG90100.2| DEHA2G02486p [Debaryomyces hansenii CBS767]
Length = 124
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 77/115 (66%), Gaps = 14/115 (12%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQV---KSKVS 58
A +ELYRRSTIG LT+ LD ++ + + P+LA+++L FD+ ++E L+ + KSK++
Sbjct: 5 AYYELYRRSTIGTTLTDALDTLISDEKIQPQLAMRILNNFDRIISELLKNESGISKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK--------SEELQE---TVGRVKIVACDSK 102
KG LHTYRFCD+VWTFI+++ L K + +L + V + KIVAC+SK
Sbjct: 65 FKGDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGNNDLNDNEINVDKFKIVACNSK 119
>gi|343424751|emb|CBQ68289.1| probable transcription initiation factor iia gamma chain
[Sporisorium reilianum SRZ2]
Length = 116
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRS+IGM LT+ LDE++Q+G + P LA++VL +FDK++ L VK+K +KGHL
Sbjct: 12 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKAIATNLGKNVKAKSQLKGHL 71
Query: 64 HTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVAC 99
YR C+ VWTF +++A K + + V +VKIVAC
Sbjct: 72 KDYRLCEEVWTFRVRNATLKLDNAEILDVDKVKIVAC 108
>gi|363752399|ref|XP_003646416.1| hypothetical protein Ecym_4566 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890051|gb|AET39599.1| hypothetical protein Ecym_4566 [Eremothecium cymbalariae
DBVPG#7215]
Length = 112
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L ++LD ++ +G + LAI+VL FDK ++EAL + +K++ KGHL
Sbjct: 7 YELYRRSTIGAALMDSLDTLISDGRIEASLAIRVLETFDKVVSEALRDKTSAKLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFK-------SEELQETVGRVKIVACDSK 102
TYRFCD+VWTFI++D E T R+ IVAC+SK
Sbjct: 67 DTYRFCDDVWTFIIKDCQVNLDQPSTDDSENNFTCDRLHIVACNSK 112
>gi|328350624|emb|CCA37024.1| Immunoglobulin-binding protein 1 [Komagataella pastoris CBS 7435]
Length = 425
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 73/98 (74%), Gaps = 3/98 (3%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR+STIG LT+ LD ++ + + P+LA+++L FD+ + + ++ + K+K+S KGHL
Sbjct: 7 YELYRKSTIGTTLTDALDTLILDQRIQPQLALRILSNFDRVVADTMKEKAKTKISFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVAC 99
HTYRFCD+VWTFI++D L + + +ETV + KIVAC
Sbjct: 67 HTYRFCDDVWTFIIKD-LGITLDQKETVRTDKFKIVAC 103
>gi|255713582|ref|XP_002553073.1| KLTH0D08338p [Lachancea thermotolerans]
gi|238934453|emb|CAR22635.1| KLTH0D08338p [Lachancea thermotolerans CBS 6340]
Length = 115
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 75/105 (71%), Gaps = 6/105 (5%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G L + LD ++ +G + LA++VL FD+ + E L+ + +SK++ KGHL
Sbjct: 7 YELYRRSTVGATLVDALDTLISDGRIEASLAMRVLDTFDRVVAETLKDKTQSKLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDA---LFKSEELQET---VGRVKIVACDSK 102
TYRFCD+VWTFI++D L ++E++Q V +++IVAC+SK
Sbjct: 67 DTYRFCDDVWTFIIKDCNVKLDQTEDIQGNTVVVDKLRIVACNSK 111
>gi|336263617|ref|XP_003346588.1| hypothetical protein SMAC_04761 [Sordaria macrospora k-hell]
gi|380090483|emb|CCC11779.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 115
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G LT+ LD+++ + P+LA++VL+QFD+ +TEAL +VK++++ KG L
Sbjct: 10 YDLYRHGSLGSTLTDALDDLIGAERMDPQLAMKVLMQFDRVITEALNEKVKARLTFKGSL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
TYRFCD VWTF++++ FK + Q T +VKIV+C +K
Sbjct: 70 DTYRFCDEVWTFLIKNVTFKMDGGQSVVTADKVKIVSCSAK 110
>gi|212530448|ref|XP_002145381.1| transcription initiation factor iia small chain [Talaromyces
marneffei ATCC 18224]
gi|210074779|gb|EEA28866.1| transcription initiation factor iia small chain [Talaromyces
marneffei ATCC 18224]
Length = 101
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Query: 11 TIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCD 70
++G+ LT+TLD+++ G + P+LA+++L +D+ +TE L QV+++++ KGHL TYRFCD
Sbjct: 4 SLGLSLTDTLDDLINEGRIEPQLAMKILSNYDRYVTEILAVQVRARLTFKGHLDTYRFCD 63
Query: 71 NVWTFILQDALFKSEELQETVG-RVKIVACDSK 102
VWTF+++D FK + Q + RVKIV+C+SK
Sbjct: 64 EVWTFLIKDVTFKLDNQQTVLADRVKIVSCNSK 96
>gi|254566241|ref|XP_002490231.1| Transcription initiation factor IIA small subunit [Komagataella
pastoris GS115]
gi|238030027|emb|CAY67950.1| Transcription initiation factor IIA small subunit [Komagataella
pastoris GS115]
Length = 110
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR+STIG LT+ LD ++ + + P+LA+++L FD+ + + ++ + K+K+S KGHL
Sbjct: 7 YELYRKSTIGTTLTDALDTLILDQRIQPQLALRILSNFDRVVADTMKEKAKTKISFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDS 101
HTYRFCD+VWTFI++D L + + +ETV + KIVAC +
Sbjct: 67 HTYRFCDDVWTFIIKD-LGITLDQKETVRTDKFKIVACSA 105
>gi|171690782|ref|XP_001910316.1| hypothetical protein [Podospora anserina S mat+]
gi|170945339|emb|CAP71451.1| unnamed protein product [Podospora anserina S mat+]
Length = 113
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G+ LT+ LDE++ + ++ P+LA++VL QFD+ + E L+ +VK +++ KG L
Sbjct: 8 YDLYRHGSLGLTLTDALDELIGDESIAPQLAMKVLTQFDRVVAETLQEKVKQRLTFKGSL 67
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + Q +V +VKIV+C +K
Sbjct: 68 DTYRFCDEVWTFLIRNVTFKMDGNQGSVVADKVKIVSCSAK 108
>gi|85112999|ref|XP_964450.1| hypothetical protein NCU09748 [Neurospora crassa OR74A]
gi|28926232|gb|EAA35214.1| predicted protein [Neurospora crassa OR74A]
gi|336470824|gb|EGO58985.1| hypothetical protein NEUTE1DRAFT_116338 [Neurospora tetrasperma
FGSC 2508]
gi|350291891|gb|EGZ73086.1| transcription initiation factor IIA, gamma subunit [Neurospora
tetrasperma FGSC 2509]
Length = 115
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 73/101 (72%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G LT+ LD+++ + P+LA++VL+QFD+ +TEAL +VK++++ KG L
Sbjct: 10 YDLYRHGSLGSTLTDALDDLIGAERIDPQLAMKVLMQFDRVITEALSEKVKARLTFKGSL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACDSK 102
TYRFCD VWTF++++ FK + Q T +VKIV+C +K
Sbjct: 70 DTYRFCDEVWTFLIKNVTFKMDGGQSVVTADKVKIVSCSAK 110
>gi|302678869|ref|XP_003029117.1| hypothetical protein SCHCODRAFT_59771 [Schizophyllum commune H4-8]
gi|300102806|gb|EFI94214.1| hypothetical protein SCHCODRAFT_59771 [Schizophyllum commune H4-8]
Length = 119
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 9/108 (8%)
Query: 2 ATFELYRRST------IGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKS 55
A +E YR S+ +GM LT++LDE++ +G +TP+LA++VL QFDKS+ + + +++
Sbjct: 4 AYYEFYRGSSYGHAPSLGMALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMANSLRA 63
Query: 56 KVSIKGHLHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
K ++KGHL TYR CD+VWTF+++ + K S +L T ++KI+AC S
Sbjct: 64 KATLKGHLKTYRLCDDVWTFVVKQPVVKLESSDLISTE-KIKIIACKS 110
>gi|342319267|gb|EGU11217.1| Transcription initiation factor iia small chain, putative
[Rhodotorula glutinis ATCC 204091]
Length = 123
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+++YRRS +G L E LDE++ +G + P+LA+ L QFDKS ++ L+ VK K ++K HL
Sbjct: 17 YQIYRRSALGTALVEALDELINSGHINPQLALMTLNQFDKSASQTLQKDVKVKSTVKAHL 76
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV---GRVKIVACDS 101
TY ++VWTFIL++ FK E ETV G+ +IVAC S
Sbjct: 77 KTYNHLEDVWTFILENPTFKFENGSETVHASGKCRIVACKS 117
>gi|324526547|gb|ADY48689.1| Transcription initiation factor IIA subunit 2 [Ascaris suum]
Length = 111
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG-H 62
+++YR +T+G+ L TLDE+V++GT++P LA V+ FDK + +AL +VK+K S K
Sbjct: 3 YQMYRTTTLGVALRNTLDELVEDGTISPPLAQNVMATFDKCINKALSQRVKNKTSFKADK 62
Query: 63 LHTYRFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
L YRFCDNVWTF++++ F+ + ++ + RVK VACD+
Sbjct: 63 LRAYRFCDNVWTFVMENVEFRDATRPIEGVIERVKFVACDA 103
>gi|403419266|emb|CCM05966.1| predicted protein [Fibroporia radiculosa]
Length = 98
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Query: 14 MCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVW 73
M LT++LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++KGHLHTYR CD+VW
Sbjct: 1 MALTDSLDELITSGAITPQLAMKVLQQFDKSLADTMVKQVKTKTTLKGHLHTYRLCDDVW 60
Query: 74 TFILQDALFKSEELQET-VGRVKIVAC 99
TFI+++ FK E + ++KIVAC
Sbjct: 61 TFIVKNPSFKMEGNEMVQAPKIKIVAC 87
>gi|390599690|gb|EIN09086.1| transcription initiation factor IIA gamma subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 119
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 9/104 (8%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR S+IGM LT+ LDE++ +G +TP+LA++VL QFDKS+ + + QVK+K ++K +
Sbjct: 6 YEFYRGSSIGMALTDALDELITSGAITPQLAMKVLNQFDKSLADTMVKQVKTKTTLKARI 65
Query: 64 H------TYRFCDNVWTFILQDALFK--SEELQETVGRVKIVAC 99
TYR CD+VWTF L++A FK S E+ T ++KIVAC
Sbjct: 66 QTPLFLCTYRLCDDVWTFSLRNAQFKMESNEMVNT-PKIKIVAC 108
>gi|367045250|ref|XP_003653005.1| hypothetical protein THITE_2170357 [Thielavia terrestris NRRL 8126]
gi|347000267|gb|AEO66669.1| hypothetical protein THITE_2170357 [Thielavia terrestris NRRL 8126]
Length = 114
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 74/101 (73%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR ++G+ LT+ LDE++ + + P+LA++VL QFD+ + E L+ +VK++++ KG L
Sbjct: 9 YDLYRHGSLGVSLTDALDELIGDERIDPQLAMKVLTQFDRIIAETLQEKVKARLTFKGSL 68
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV--GRVKIVACDSK 102
TYRFCD VWTF++++ FK + +TV +VKIV+C +K
Sbjct: 69 DTYRFCDEVWTFLIRNVTFKLDNGSQTVQADKVKIVSCSAK 109
>gi|156546312|ref|XP_001606238.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Nasonia vitripennis]
Length = 115
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 75/102 (73%), Gaps = 3/102 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-G 61
+++LYR +T+G L ETLD+++ ++ LA++VL+QFDK+M +AL T+VKS+++ K G
Sbjct: 2 SYQLYRNTTLGNTLEETLDDLLAYDQISRGLAVKVLLQFDKAMNQALTTKVKSRLNFKAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQET--VGRVKIVACDS 101
+L TYRFCDNVWT +L D F+ + ++ V +VKIVAC+
Sbjct: 62 NLKTYRFCDNVWTLMLHDVEFRDSQRVDSIHVDKVKIVACEG 103
>gi|154303585|ref|XP_001552199.1| hypothetical protein BC1G_08677 [Botryotinia fuckeliana B05.10]
gi|156049595|ref|XP_001590764.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154692903|gb|EDN92641.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 97
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 68/91 (74%), Gaps = 2/91 (2%)
Query: 14 MCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVW 73
M LT+TLD+++ + P+LA+++L FD+S+TE L +VK++++ KGHL TYRFCD VW
Sbjct: 1 MALTDTLDDLISERRIEPQLAMKILANFDRSITEVLADKVKARLTFKGHLDTYRFCDEVW 60
Query: 74 TFILQDALFKSEELQETV--GRVKIVACDSK 102
TF+++D FK E ++V +VKIV+C+SK
Sbjct: 61 TFLIKDVTFKMENSSQSVTADKVKIVSCNSK 91
>gi|344228279|gb|EGV60165.1| transcription initiation factor IIA, gamma subunit [Candida tenuis
ATCC 10573]
Length = 120
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 76/111 (68%), Gaps = 10/111 (9%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRST+G LT+ LD+++ + + P+LA+ ++ FD+ ++E L+ + KSK++
Sbjct: 5 AYYELYRRSTVGATLTDALDQLISDEKIQPQLAMTIVTNFDRVISELLKPEQNIAKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK-----SEELQE--TVGRVKIVACDSK 102
KG L TYRFCD+VWTFI+++ L K EL + TV + KIVAC+S+
Sbjct: 65 FKGDLSTYRFCDDVWTFIIKNVLIKLTDTSHSELNDEVTVDKFKIVACNSR 115
>gi|448079724|ref|XP_004194448.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|448084209|ref|XP_004195547.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|359375870|emb|CCE86452.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
gi|359376969|emb|CCE85352.1| Piso0_004942 [Millerozyma farinosa CBS 7064]
Length = 124
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 14/115 (12%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG LT+ LD ++ + + P+LA ++L FD+ ++E L+ + KSK++
Sbjct: 5 AYYELYRRSTIGTTLTDALDTLITDEKIQPQLANKILNNFDRIISELLKNESSIAKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQETVG-----------RVKIVACDSK 102
KG LHTYRFCD+VWTFI+++ + K ++ + G + KIVAC+SK
Sbjct: 65 FKGDLHTYRFCDDVWTFIIKNVIIKLTDVSNSGGDSLGDNEISVDKFKIVACNSK 119
>gi|357126992|ref|XP_003565171.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Brachypodium distachyon]
Length = 63
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 45 MTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLL 104
M+ AL+ QVKSKV IKGHL TYRFCDNVWTFIL DA F++E++ ET+GRVKIVACDS L+
Sbjct: 1 MSAALQHQVKSKVIIKGHLRTYRFCDNVWTFILADATFRNEKISETLGRVKIVACDSNLI 60
Query: 105 SQ 106
Q
Sbjct: 61 PQ 62
>gi|430814155|emb|CCJ28569.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 392
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 68/89 (76%)
Query: 14 MCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVW 73
+ LT+ LD+++++G + P+LA+++L+ FDKS+T+ L +VKS+++ +GHL TYRFCD VW
Sbjct: 4 ISLTDALDDLIRDGQIPPQLAMKILLNFDKSITDNLTEKVKSRMTFRGHLDTYRFCDEVW 63
Query: 74 TFILQDALFKSEELQETVGRVKIVACDSK 102
TFI+++ F+ E ++KIVAC+SK
Sbjct: 64 TFIIKNPCFRLENDTMVADKIKIVACNSK 92
>gi|150951578|ref|XP_001387921.2| Transcription initiation factor IIA small chain (TFIIA 13.5 kDa
subunit) [Scheffersomyces stipitis CBS 6054]
gi|149388710|gb|EAZ63898.2| Transcription initiation factor IIA small chain (TFIIA 13.5 kDa
subunit) [Scheffersomyces stipitis CBS 6054]
Length = 119
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 9/110 (8%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRST+G LT+ LD ++ + + P+LA+++L FD+ ++E L+ + KS+++
Sbjct: 5 AYYELYRRSTVGATLTDALDTLISDEKIQPQLAMRILANFDRIISENLKLENNIAKSRLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQE------TVGRVKIVACDSK 102
KG L TY FCD+VWTFI+++ L K ++ TV + KIVAC+SK
Sbjct: 65 FKGVLSTYNFCDDVWTFIIKNVLIKMSDVSANVDSEITVDKFKIVACNSK 114
>gi|198418949|ref|XP_002126495.1| PREDICTED: similar to general transcription factor IIA, 2, 12kDa
[Ciona intestinalis]
Length = 108
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 78/100 (78%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++LYR +T+G L E+LDE++Q+ +TP+LA++VL++FDK++ L ++V+++V+ +G
Sbjct: 2 SYQLYRSTTLGNSLQESLDELIQSQQITPQLALRVLLEFDKAINHGLSSRVRNRVTFRGD 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L++ F ++ V +VKIVACD +
Sbjct: 62 LNTYRFCDNVWTFVLKNTEFTDCLVKVKVDKVKIVACDGR 101
>gi|302306622|ref|NP_983017.2| ABR071Wp [Ashbya gossypii ATCC 10895]
gi|299788605|gb|AAS50841.2| ABR071Wp [Ashbya gossypii ATCC 10895]
gi|374106220|gb|AEY95130.1| FABR071Wp [Ashbya gossypii FDAG1]
Length = 112
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 7/106 (6%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG+ L ++LD ++ +G + LA++VL FDK ++E L + +K++ KGHL
Sbjct: 7 YELYRRSTIGVALMDSLDTLISDGRIEASLAMRVLETFDKVVSETLRDKTSAKLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFK-------SEELQETVGRVKIVACDSK 102
TYRFCD+VWTFI++D E T R+ IVAC+SK
Sbjct: 67 DTYRFCDDVWTFIIKDCQVNLDQPSADGAESSFTCERLHIVACNSK 112
>gi|398392047|ref|XP_003849483.1| hypothetical protein MYCGRDRAFT_62604 [Zymoseptoria tritici IPO323]
gi|339469360|gb|EGP84459.1| hypothetical protein MYCGRDRAFT_62604 [Zymoseptoria tritici IPO323]
Length = 114
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYR ++IG+ L +TLD+++ + + P+LA++++ FD+ + L +VK++++ KGHL
Sbjct: 10 YELYRGTSIGLALADTLDDLISSRRIEPQLAMRIMANFDQHIASVLGEKVKARMNFKGHL 69
Query: 64 HTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSK 102
YRFCD VWTF+++D FK + Q +VKIVAC +K
Sbjct: 70 DVYRFCDEVWTFVIKDVKFKMDNNTQQLDAEKVKIVACQTK 110
>gi|313231289|emb|CBY08404.1| unnamed protein product [Oikopleura dioica]
Length = 114
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 71/100 (71%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L ++LDE++Q ++ L +VL +FDK++ AL +V+++++ KG
Sbjct: 2 NYQLYRNTTLGTTLIDSLDELIQQQAISHSLRQKVLEEFDKAINYALANKVRNRITFKGK 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF++++A F+ V +VK+VACD K
Sbjct: 62 LNTYRFCDNVWTFVIENAEFREVIDCIQVPKVKVVACDGK 101
>gi|380799729|gb|AFE71740.1| transcription initiation factor IIA subunit 2, partial [Macaca
mulatta]
Length = 90
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 62/82 (75%)
Query: 21 DEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDA 80
DE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D
Sbjct: 1 DELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDV 60
Query: 81 LFKSEELQETVGRVKIVACDSK 102
F+ V +VKIVACD K
Sbjct: 61 EFREVTELIKVDKVKIVACDGK 82
>gi|354483073|ref|XP_003503719.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Cricetulus griseus]
Length = 109
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 68/100 (68%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LY +T+G L E LDE++Q+ +TP+LA QVL+Q DK++ AL +V+++V+ +
Sbjct: 2 AYQLYGNTTLGNSLQEGLDELIQSQQITPQLAFQVLLQCDKAINSALAQRVRNRVNFRDS 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L+TYRFCDNVWTF+L D F+ V +VKIVA K
Sbjct: 62 LNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVAYGGK 101
>gi|353234802|emb|CCA66823.1| probable TFIIA subunit [transcription initiation factor]
[Piriformospora indica DSM 11827]
Length = 125
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+ELYR S++G+ L ++LD ++ + +TP+LAI+++ ++DK++ + L+ QVK+K + KG
Sbjct: 4 PYELYRGSSVGIALADSLDALISSNEITPQLAIRIMERYDKAVCDVLQKQVKAKATFKGR 63
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQE-TVGRVKIVAC 99
LHTYR CD+VW+F L+ K E ++ V ++KI+AC
Sbjct: 64 LHTYRNCDDVWSFYLRKCTLKMEGGEQVPVEKLKIIAC 101
>gi|312073160|ref|XP_003139395.1| hypothetical protein LOAG_03809 [Loa loa]
Length = 525
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 8 RRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH-LHTY 66
R +T+G+ L TLDE V++GT+TP LA VL FDK + AL +VK+KV+ K L Y
Sbjct: 421 RSTTLGIALRSTLDEFVEDGTITPSLAQTVLTTFDKCINRALSQRVKNKVNFKADKLKAY 480
Query: 67 RFCDNVWTFILQDALFK--SEELQETVGRVKIVACDS 101
RFCDNVWTF++++ F+ ++ + V RVKIVACD+
Sbjct: 481 RFCDNVWTFVMENVEFRDVTQPVDGIVDRVKIVACDA 517
>gi|195469637|ref|XP_002099743.1| GE16551 [Drosophila yakuba]
gi|194187267|gb|EDX00851.1| GE16551 [Drosophila yakuba]
Length = 104
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI-KGH 62
++ YR +T+G L ETL+EM+Q+G +T ELA VL ++DKS+T AL +V +K++ G
Sbjct: 3 YQHYRATTLGTTLQETLEEMIQSGEITQELANAVLQKYDKSVTNALSKKVTTKINFTAGR 62
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L TYRFCDNVWT IL+D F+ + V VK+VAC K
Sbjct: 63 LQTYRFCDNVWTLILKDVEFRKGQEVLQVDAVKVVACLGK 102
>gi|50290107|ref|XP_447485.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526795|emb|CAG60422.1| unnamed protein product [Candida glabrata]
Length = 120
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 12/111 (10%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK ++E L+ +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVSETLKDNAQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQ----------DALFKSEELQET--VGRVKIVACDSK 102
TY FCD+VWTFI++ AL ++E Q T V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKKCQVTVEGPASALNPTDEPQTTLSVDKLRIVACNSK 117
>gi|444322864|ref|XP_004182073.1| hypothetical protein TBLA_0H02700 [Tetrapisispora blattae CBS 6284]
gi|387515119|emb|CCH62554.1| hypothetical protein TBLA_0H02700 [Tetrapisispora blattae CBS 6284]
Length = 114
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 73/105 (69%), Gaps = 6/105 (5%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G CL + LD ++ +G + LA++VL FD+ E+L + ++++++KG+L
Sbjct: 7 YELYRRSTLGNCLVDALDTLISDGRMEASLAMRVLEAFDRVAAESLRDRAQARLAVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALF----KSEELQET--VGRVKIVACDSK 102
TY FCD+VWTFI++D S + Q+T V +++IVAC++K
Sbjct: 67 DTYGFCDDVWTFIVKDCQVTVDNPSGDTQQTLPVDKLRIVACNAK 111
>gi|443915141|gb|ELU36719.1| transcription initiation factor IIA, gamma subunit
domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 128
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 7/96 (7%)
Query: 11 TIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK------GHLH 64
+IG+ LT++LDE++ +G++TP+LA++VL QFDKS+ + L VK K ++K GHL
Sbjct: 21 SIGIALTDSLDELITSGSITPQLAMKVLAQFDKSLADTLVKHVKVKTNLKVSATAVGHLS 80
Query: 65 TYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVAC 99
TYR CD VWTFI++ A FK E + T ++KIVAC
Sbjct: 81 TYRLCDEVWTFIVRGANFKMESNEVVTAQKIKIVAC 116
>gi|312371194|gb|EFR19440.1| hypothetical protein AND_22420 [Anopheles darlingi]
Length = 632
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 6 LYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-GHLH 64
LYR +T+G L ETLDEM+Q G +TP L +VLVQFDKS+ AL +VKS+V+ K G L+
Sbjct: 116 LYRNTTLGCMLQETLDEMLQYGQITPHLFSRVLVQFDKSINAALSNRVKSRVTFKAGKLN 175
Query: 65 TYRFCDNVWTFILQDALFK 83
TYRFCDNVWT +L D F+
Sbjct: 176 TYRFCDNVWTLMLNDVEFR 194
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 22 EMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-GHLHTYRFCDNVWTFILQDA 80
E + G +TP L+ +VL+QFDKS+ AL +VKS+V+ K G L+TYRFCDNVWT +L D
Sbjct: 198 EFAKYGQITPHLSGRVLIQFDKSINAALSNRVKSRVTFKAGKLNTYRFCDNVWTLMLNDV 257
Query: 81 LFKSEELQETVGRVKIVACDSK 102
F+ E+ E ++ V S+
Sbjct: 258 EFR--EVHEFAKPLEAVTTRSR 277
>gi|146412514|ref|XP_001482228.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 123
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 75/112 (66%), Gaps = 13/112 (11%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQV---KSKVSIK 60
+E+YRR+TIG L + LD ++ + + P+LA ++L FD+ +++ L++++ KSK++ K
Sbjct: 7 YEIYRRATIGTTLADALDSLITDQQIQPQLANKILNNFDRVISDLLKSELGIAKSKLTFK 66
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQE----------TVGRVKIVACDSK 102
G LHTYRFCD+VWTFI+++ L K ++ +V R KIVAC+++
Sbjct: 67 GDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGDMLNDNELSVDRFKIVACNAR 118
>gi|194912209|ref|XP_001982456.1| GG12724 [Drosophila erecta]
gi|190648132|gb|EDV45425.1| GG12724 [Drosophila erecta]
Length = 104
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI-KG 61
T++ YR +T+G L ETLDEM+Q+G +T ++A VL ++DKS+T+AL+ V SK++ G
Sbjct: 2 TYQHYRATTLGTTLQETLDEMIQSGDITEDMASVVLRKYDKSVTKALDEHVTSKINFTAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L YRFCDNVWT +L+D F+ + V VK+VAC K
Sbjct: 62 RLENYRFCDNVWTLLLKDVEFRQGQEVLQVDAVKVVACLGK 102
>gi|190348655|gb|EDK41150.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 123
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 74/112 (66%), Gaps = 13/112 (11%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVSIK 60
+E+YRR+TIG L + LD ++ + + P+LA ++L FD+ +++ L+++ KSK++ K
Sbjct: 7 YEIYRRATIGTTLADALDSLITDQQIQPQLANKILNNFDRVISDLLKSESGIAKSKLTFK 66
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQE----------TVGRVKIVACDSK 102
G LHTYRFCD+VWTFI+++ L K ++ +V R KIVAC+++
Sbjct: 67 GDLHTYRFCDDVWTFIIKNVLIKLTDVSNSGDMLNDNELSVDRFKIVACNAR 118
>gi|50305621|ref|XP_452771.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641904|emb|CAH01622.1| KLLA0C12815p [Kluyveromyces lactis]
Length = 113
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G L ++LD ++ +G + LA+ +L FD+ +++ L + SK++ KGHL
Sbjct: 7 YELYRRSTLGASLMDSLDTLISDGRIEASLAMTILETFDRVISDTLRDKTTSKLTFKGHL 66
Query: 64 HTYRFCDNVWTFILQDALFK----SEELQETVGRVKIVACDSK 102
TYRFCD+VWTFI++D + K +E + ++ IVAC++K
Sbjct: 67 DTYRFCDDVWTFIVKDCIVKLDGQDQESELKCDKLHIVACNAK 109
>gi|358335180|dbj|GAA53680.1| transcription initiation factor TFIIA small subunit [Clonorchis
sinensis]
Length = 160
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 15/117 (12%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAI---------------QVLVQFDKSM 45
M ++YRR+T+G L E LDEMV++ L + A+ QV+ +FD+ +
Sbjct: 1 MTYHQMYRRTTLGNTLQEALDEMVEHKLLQQKTALKVNATRNDEAYFPCLQVIQKFDQCI 60
Query: 46 TEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+ AL +VK+++S+KGHL+TYRFCDNVWT ++ D K TV ++KIVAC+ K
Sbjct: 61 SLALAKRVKNRLSLKGHLNTYRFCDNVWTLVMNDVEIKDSSAIMTVDKIKIVACEGK 117
>gi|390339399|ref|XP_001178578.2| PREDICTED: transcription initiation factor IIA subunit 2-like
[Strongylocentrotus purpuratus]
Length = 95
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 29 LTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQ 88
+TP+LA+ VL++FD+++ +AL ++K+K+S KGHL+TYRFCDNVWTF+L D F++ +
Sbjct: 15 ITPQLALNVLLKFDRAINDALANRLKNKISFKGHLNTYRFCDNVWTFVLNDVDFRNGDF- 73
Query: 89 ETVGRVKIVACDSKL 103
TV +VKIVA D K+
Sbjct: 74 VTVDKVKIVAVDGKI 88
>gi|412990173|emb|CCO19491.1| transcription initiation factor IIA gamma chain [Bathycoccus
prasinos]
Length = 98
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
Query: 14 MCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVW 73
M LT+ LDEMV LTP +A+++L++FD+ + + LE +K K + HLHTYRFCDNVW
Sbjct: 1 MALTDALDEMVTARELTPTIAMRILLEFDRCIVKELEL-LKQKTTFGAHLHTYRFCDNVW 59
Query: 74 TFILQDALFKSEELQETV-----GRVKIVACDSKLLSQ 106
TFIL++ FK+ V +VK+VACDSK+L +
Sbjct: 60 TFILENVKFKATNYSGIVEEIHADKVKVVACDSKILER 97
>gi|344300448|gb|EGW30769.1| hypothetical protein SPAPADRAFT_142741 [Spathaspora passalidarum
NRRL Y-27907]
Length = 125
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 75/116 (64%), Gaps = 15/116 (12%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG+ LT+ LD ++ + + P+LA ++L FD+ +++ L+ + KSK++
Sbjct: 5 AYYELYRRSTIGVTLTDALDTLISDERIPPQLANRILTNFDRIISDLLKHESNIAKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK------------SEELQETVGRVKIVACDSK 102
KG L TYRFCD+VWTFI+++ L K S + + V + KIVAC+S+
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVLIKMSDVTGGGSGNDSVDTEVQVEKFKIVACNSR 120
>gi|68466137|ref|XP_722843.1| hypothetical protein CaO19.12095 [Candida albicans SC5314]
gi|68466430|ref|XP_722697.1| hypothetical protein CaO19.4625 [Candida albicans SC5314]
gi|46444687|gb|EAL03960.1| hypothetical protein CaO19.4625 [Candida albicans SC5314]
gi|46444843|gb|EAL04115.1| hypothetical protein CaO19.12095 [Candida albicans SC5314]
Length = 130
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 20/121 (16%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQV---KSKVS 58
A +ELYRRSTIG+ L + LD ++ + + P+LA ++L+ FD+ + E L+ + KSK+
Sbjct: 5 AYYELYRRSTIGVTLMDALDTLISDEKIQPQLANRILINFDRIIAENLKNENIVGKSKLI 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK-----------------SEELQETVGRVKIVACDS 101
KG L TYRFCD+VWTFI+++ + K S +L+ V + KIVAC+S
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVIIKLNDVSSKDSGGGDKDKDSGDLELNVDKFKIVACNS 124
Query: 102 K 102
+
Sbjct: 125 R 125
>gi|307108792|gb|EFN57031.1| hypothetical protein CHLNCDRAFT_15032, partial [Chlorella
variabilis]
gi|307108793|gb|EFN57032.1| hypothetical protein CHLNCDRAFT_15221, partial [Chlorella
variabilis]
Length = 83
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
MA LYR+S +G L + LD++V+ G L P+LA+++L ++D+ + E +E +V +K S+K
Sbjct: 1 MACSALYRQSKLGHSLVDALDQLVEEGKLPPQLALRILDEYDEVVFETMENKVTAKGSLK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFK 83
GHL YRFCDNVWTFIL A F+
Sbjct: 61 GHLDIYRFCDNVWTFILSGATFR 83
>gi|50556660|ref|XP_505738.1| YALI0F22136p [Yarrowia lipolytica]
gi|49651608|emb|CAG78549.1| YALI0F22136p [Yarrowia lipolytica CLIB122]
Length = 111
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ +YR S+IG LTE LDE++++ T+ P+LA++V+ FD+ M + L V++++S KG L
Sbjct: 7 YNIYRVSSIGTALTEALDELIRDSTIPPQLALKVVEVFDRVMADTLRNDVRNRMSFKGEL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG--RVKIVACDSK 102
HTYR ++VWTFI++ +FK + + V ++KIV C+++
Sbjct: 67 HTYRGLEDVWTFIIRRVVFKMDN-NDVVNADKIKIVTCNAR 106
>gi|156842031|ref|XP_001644385.1| hypothetical protein Kpol_1064p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156115027|gb|EDO16527.1| hypothetical protein Kpol_1064p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 123
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 15/114 (13%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G CL + LD ++ +G + LA++VL FD+ + E+L+ +SK+++KG L
Sbjct: 7 YELYRRSTVGNCLVDALDTLISDGRIEASLAMRVLETFDRVVAESLKDNTQSKLTVKGLL 66
Query: 64 HTYRFCDNVWTFILQDALFKSE------ELQETVG---------RVKIVACDSK 102
TY FCD+VWTFI++ E EL +T G +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIIKSCQVTVESSSINRELGDTSGDDHTTIAVDKLRIVACNSK 120
>gi|195347518|ref|XP_002040299.1| GM19003 [Drosophila sechellia]
gi|194121727|gb|EDW43770.1| GM19003 [Drosophila sechellia]
Length = 107
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI-KG 61
++ YR +T+G L ETLDEM++ G +T E+ VL ++DKS+T AL+ S ++ G
Sbjct: 2 NYQHYRATTLGSTLQETLDEMMERGDITQEIVNLVLQKYDKSVTSALKEHGTSNMTFTAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
LHT+RFCDNVWT IL+DA F+ ++ V VK+VAC
Sbjct: 62 RLHTFRFCDNVWTLILKDAEFREDQHSMKVDVVKVVAC 99
>gi|366996376|ref|XP_003677951.1| hypothetical protein NCAS_0H02940 [Naumovozyma castellii CBS 4309]
gi|342303821|emb|CCC71604.1| hypothetical protein NCAS_0H02940 [Naumovozyma castellii CBS 4309]
Length = 120
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 14/112 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK ++E L+ +K+S+KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVSETLKDNTAAKMSVKGNL 66
Query: 64 HTYRFCDNVWTFILQ-------------DALFKSEELQETVGRVKIVACDSK 102
TY FCD+VWTFI++ DA +S+ + TV +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCKVTVEGNSNIMDANGESQNVI-TVDKLRIVACNSK 117
>gi|241954206|ref|XP_002419824.1| transcription initiation factor IIA (TFIIA) small subunit, putative
[Candida dubliniensis CD36]
gi|223643165|emb|CAX42039.1| transcription initiation factor IIA (TFIIA) small subunit, putative
[Candida dubliniensis CD36]
Length = 129
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 19/120 (15%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQV---KSKVS 58
A +ELYRRSTIG+ L + LD ++ + + P+LA ++L+ FD+ + E L+ + KSK+
Sbjct: 5 AYYELYRRSTIGVTLMDALDTLISDEKIQPQLANRILINFDRIIAENLKNENIVGKSKLI 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK----------------SEELQETVGRVKIVACDSK 102
KG L TYRFCD+VWTFI+++ + K S +L+ V + KIVAC+S+
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVIIKLNDVSKDNNNNSNDKDSGDLELNVDKFKIVACNSR 124
>gi|198452236|ref|XP_002137443.1| GA26545 [Drosophila pseudoobscura pseudoobscura]
gi|198131845|gb|EDY68001.1| GA26545 [Drosophila pseudoobscura pseudoobscura]
Length = 129
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG-H 62
++LYR ST+G+ L +TLDE+V+NG ++P LA +VL Q+D S+ EA + VK+ ++ G
Sbjct: 3 YQLYRSSTVGITLQDTLDELVKNGQMSPFLAGKVLQQYDVSINEAFKENVKTCLTFTGSR 62
Query: 63 LHTYRFCDNVWTFILQDALFKSEE-LQETVGRVKIVACDS 101
L +Y+FCDNVWT L+D F S+ + V +VKIVAC+S
Sbjct: 63 LSSYQFCDNVWTLRLKDVEFCSKNHVIAKVDKVKIVACES 102
>gi|448530103|ref|XP_003869987.1| Toa2 TFIIA small subunit [Candida orthopsilosis Co 90-125]
gi|380354341|emb|CCG23856.1| Toa2 TFIIA small subunit [Candida orthopsilosis]
Length = 128
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 73/119 (61%), Gaps = 18/119 (15%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG+ L + LD ++ + + P+LA ++L FD+ + E L+ + KSK++
Sbjct: 5 AYYELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNESNIAKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQET---------------VGRVKIVACDSK 102
KG L TYRFCD+VWTFI+++ L K +L + V + KIVAC+++
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVLVKMTDLSGSTTGSSGGSDGDLELHVDKFKIVACNAR 123
>gi|367000241|ref|XP_003684856.1| hypothetical protein TPHA_0C02690 [Tetrapisispora phaffii CBS 4417]
gi|357523153|emb|CCE62422.1| hypothetical protein TPHA_0C02690 [Tetrapisispora phaffii CBS 4417]
Length = 129
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 21/120 (17%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G CL + LD ++ +G + LA++VL FDK ++E+L +SK+++KG L
Sbjct: 7 YELYRRSTVGSCLVDALDTLISDGRIEASLAMKVLESFDKVVSESLRENTQSKLNVKGLL 66
Query: 64 HTYRFCDNVWTFILQD----------ALFKSEELQET-----------VGRVKIVACDSK 102
TY FCD+VWTFI++D A +E ++ V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIIKDCKVTVESNKTATITNENGEQVTSTTDEQQTIQVDKLRIVACNSK 126
>gi|326926507|ref|XP_003209441.1| PREDICTED: transcription initiation factor IIA subunit 2-like,
partial [Meleagris gallopavo]
Length = 99
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%)
Query: 24 VQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFK 83
+Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D F+
Sbjct: 13 LQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFR 72
Query: 84 SEELQETVGRVKIVACDSK 102
V +VKIVACD K
Sbjct: 73 EVTELVKVDKVKIVACDGK 91
>gi|339245513|ref|XP_003378682.1| protein YIPF5 [Trichinella spiralis]
gi|316972395|gb|EFV56073.1| protein YIPF5 [Trichinella spiralis]
Length = 331
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK-GH 62
++LYR +T+G L ETLDE +Q+G +T +LA +VL +D++M +AL T+V+SK+ + G
Sbjct: 3 YQLYRNTTLGSTLQETLDEFIQSGQITQQLAFKVLQAYDRTMNKALSTKVRSKIQFRAGK 62
Query: 63 LHTYRFCDNVWTFILQDALFK 83
L TYRFCDNVWTF+++ F+
Sbjct: 63 LCTYRFCDNVWTFVMEQIEFR 83
>gi|453081398|gb|EMF09447.1| transcription initiation factor iia small chain [Mycosphaerella
populorum SO2202]
Length = 103
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
Y RS IG+ L +TLD+++ + + P+LA++++ FD+ + L +VK++++ KGHL Y
Sbjct: 4 YARS-IGLALADTLDDLISSRRIEPQLAMRIMANFDQHIATVLGDKVKARMTFKGHLDVY 62
Query: 67 RFCDNVWTFILQDALFKSEEL-QETVGRVKIVACDSK 102
RFCD VWTF+++D FK + Q +VKIVAC SK
Sbjct: 63 RFCDEVWTFVIKDVKFKMDNAHQMDAEKVKIVACQSK 99
>gi|354547727|emb|CCE44462.1| hypothetical protein CPAR2_402630 [Candida parapsilosis]
Length = 129
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 19/120 (15%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG+ L + LD ++ + + P+LA ++L FD+ + E L+ + KSK++
Sbjct: 5 AYYELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNESNIAKSKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQET----------------VGRVKIVACDSK 102
KG L TYRFCD+VWTFI+++ L K +L + V + KIVAC+++
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVLVKMTDLSGSASGSSGGGSDGDLELHVDKFKIVACNAR 124
>gi|195553916|ref|XP_002076788.1| GD24638 [Drosophila simulans]
gi|194202778|gb|EDX16354.1| GD24638 [Drosophila simulans]
Length = 107
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI-KG 61
++ YR +T+G L ETLDEM++ G +T E+A VL ++DKS+T AL+ S ++ G
Sbjct: 2 NYQHYRATTLGSTLQETLDEMMERGDITQEIANLVLQKYDKSVTSALKEHGTSNMTFTAG 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
L T+RFCDNVWT IL+DA F+ ++ V VK+VAC
Sbjct: 62 RLQTFRFCDNVWTLILKDAEFREDQHSMKVDVVKVVAC 99
>gi|149028855|gb|EDL84196.1| general transcription factor IIa 2, isoform CRA_b [Rattus
norvegicus]
Length = 93
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 21 DEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDA 80
D + + +TP+LA+QVL+QFDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D
Sbjct: 4 DSLFWSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDV 63
Query: 81 LFKSEELQETVGRVKIVACDSK 102
F+ V +VKIVACD K
Sbjct: 64 EFREVTELIKVDKVKIVACDGK 85
>gi|254582957|ref|XP_002499210.1| ZYRO0E06622p [Zygosaccharomyces rouxii]
gi|238942784|emb|CAR30955.1| ZYRO0E06622p [Zygosaccharomyces rouxii]
Length = 122
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G L + LD M+ +G + LA++VL FD+ + E L +SK+++KG+L
Sbjct: 7 YELYRRSTVGNSLVDALDTMISDGRIEASLAMRVLETFDRVVAETLRDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVG--------------RVKIVACDSK 102
TY FCD+VWTFI+++ E E G +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEGSHEGSGHMGGSDGQSTIAVDKLRIVACNSK 119
>gi|333449428|gb|AEF33400.1| transcription initiation factor IIA subunit 2 protein, partial
[Crassostrea ariakensis]
Length = 101
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 27 GTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEE 86
G +TP+LA++VL+QFDK++ AL +VK+++ +KG L+TYRFCDNVWTF+L + F+ +
Sbjct: 20 GQITPQLALKVLLQFDKAINTALANRVKNRIQLKGKLNTYRFCDNVWTFVLNNVDFRDVQ 79
Query: 87 LQETVGRVKIVACDSKLLS 105
+VKIVACD K S
Sbjct: 80 ELAKCDKVKIVACDGKSAS 98
>gi|1633310|pdb|1YTF|D Chain D, Yeast TfiiaTBPDNA COMPLEX
gi|38492533|pdb|1NH2|D Chain D, Crystal Structure Of A Yeast TfiiaTBPDNA COMPLEX
Length = 121
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L+ +SK+++KG+L
Sbjct: 6 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNL 65
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--------------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E+ +V +++IVAC+SK
Sbjct: 66 DTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSK 118
>gi|6322792|ref|NP_012865.1| Toa2p [Saccharomyces cerevisiae S288c]
gi|418109|sp|P32774.1|T2AG_YEAST RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=TFIIA 13.5 kDa subunit; AltName:
Full=Transcription initiation factor IIA small chain;
AltName: Full=Transcription initiation factor IIA small
subunit
gi|73535264|pdb|1RM1|B Chain B, Structure Of A Yeast TfiiaTBPTATA-Box Dna Complex
gi|172895|gb|AAA19653.1| transcription factor IIA [Saccharomyces cerevisiae]
gi|433648|emb|CAA53423.1| B112 [Saccharomyces cerevisiae]
gi|486077|emb|CAA81895.1| TOA2 [Saccharomyces cerevisiae]
gi|45269671|gb|AAS56216.1| YKL058W [Saccharomyces cerevisiae]
gi|151941488|gb|EDN59851.1| transcription factor IIA subunit [Saccharomyces cerevisiae YJM789]
gi|190409771|gb|EDV13036.1| transcription initiation factor IIA small chain [Saccharomyces
cerevisiae RM11-1a]
gi|256272473|gb|EEU07454.1| Toa2p [Saccharomyces cerevisiae JAY291]
gi|259147780|emb|CAY81030.1| Toa2p [Saccharomyces cerevisiae EC1118]
gi|285813202|tpg|DAA09099.1| TPA: Toa2p [Saccharomyces cerevisiae S288c]
gi|323332781|gb|EGA74186.1| Toa2p [Saccharomyces cerevisiae AWRI796]
gi|323347785|gb|EGA82049.1| Toa2p [Saccharomyces cerevisiae Lalvin QA23]
gi|349579505|dbj|GAA24667.1| K7_Toa2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365764606|gb|EHN06128.1| Toa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298080|gb|EIW09178.1| Toa2p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1587559|prf||2206495H Transcription Factor IIA:SUBUNIT=small
Length = 122
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L+ +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--------------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E+ +V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACNSK 119
>gi|401840246|gb|EJT43148.1| TOA2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 122
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L+ +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--------------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E+ +V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEDSHHDASQNGSGDSQSVISVDKLRIVACNSK 119
>gi|401624837|gb|EJS42876.1| toa2p [Saccharomyces arboricola H-6]
Length = 122
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L+ +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--------------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E+ +V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEDSHHDASQSGSGDSQSVISVDKLRIVACNSK 119
>gi|365759706|gb|EHN01481.1| Toa2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 134
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L+ +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE--------------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E+ +V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEDSHHDASQNGSGDSQSVISVDKLRIVACNSK 119
>gi|367011024|ref|XP_003680013.1| hypothetical protein TDEL_0B06730 [Torulaspora delbrueckii]
gi|359747671|emb|CCE90802.1| hypothetical protein TDEL_0B06730 [Torulaspora delbrueckii]
Length = 118
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 70/109 (64%), Gaps = 10/109 (9%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G L + LD ++ +G + LA++VL FD+ + E L +SK+++KG+L
Sbjct: 7 YELYRRSTVGNSLVDALDTLISDGRIEASLAMRVLETFDRVVAETLRDNTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALF--------KSEELQETVG--RVKIVACDSK 102
TY FCD+VWTFI+++ S + Q TV +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEGVPGGNSGDAQTTVSVDKLRIVACNSK 115
>gi|327284512|ref|XP_003226981.1| PREDICTED: transcription initiation factor IIA subunit 2-like
[Anolis carolinensis]
Length = 99
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 55/74 (74%)
Query: 29 LTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQ 88
+TP+LA+QVL+QFDK++ A +V+++V+ +G L+TYRFCDNVWTF+L D F+
Sbjct: 18 ITPQLALQVLLQFDKAINSAFAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTEL 77
Query: 89 ETVGRVKIVACDSK 102
V +VKIVACD K
Sbjct: 78 VKVDKVKIVACDGK 91
>gi|410083010|ref|XP_003959083.1| hypothetical protein KAFR_0I01670 [Kazachstania africana CBS 2517]
gi|372465673|emb|CCF59948.1| hypothetical protein KAFR_0I01670 [Kazachstania africana CBS 2517]
Length = 115
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 7/106 (6%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ G + LA++VL FD+ + E+L +SK+++KG+L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISEGRIEASLAMRVLETFDRVVAESLRENTQSKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQE-------TVGRVKIVACDSK 102
TY FCD+VWTFI+++ E V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCQVTVEGSAADGNNDTIAVDKLRIVACNSK 112
>gi|17551834|ref|NP_498226.1| Protein B0336.13 [Caenorhabditis elegans]
gi|20141028|sp|Q9BIB4.1|YMYD_CAEEL RecName: Full=Transcription initiation factor IIA small chain
homolog
gi|351065569|emb|CCD61534.1| Protein B0336.13 [Caenorhabditis elegans]
Length = 139
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI- 59
M+++ LYR +T+G L +TL++M G LT LA +VL QFDKSM + + K K++
Sbjct: 1 MSSYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFC 60
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSK 102
L TYR+CDNVWTFIL + K + E + ++K+VACD +
Sbjct: 61 ATQLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGR 105
>gi|365984289|ref|XP_003668977.1| hypothetical protein NDAI_0C00730 [Naumovozyma dairenensis CBS 421]
gi|343767745|emb|CCD23734.1| hypothetical protein NDAI_0C00730 [Naumovozyma dairenensis CBS 421]
Length = 122
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 71/113 (62%), Gaps = 14/113 (12%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRST+G L + LD ++ +G + LA++VL FDK ++E L+ ++K+++KG+L
Sbjct: 7 YELYRRSTVGNSLVDALDTLISDGRIEASLAMRVLETFDKVISETLKDNTQAKLTVKGNL 66
Query: 64 HTYRFCDNVWTFILQ--------------DALFKSEELQETVGRVKIVACDSK 102
TY FCD+VWTFI++ D+ ++ V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCKVTVEGNSQINGDSNNSDDQNIINVDKLRIVACNSK 119
>gi|255720977|ref|XP_002545423.1| transcription initiation factor IIA small chain [Candida tropicalis
MYA-3404]
gi|240135912|gb|EER35465.1| transcription initiation factor IIA small chain [Candida tropicalis
MYA-3404]
Length = 212
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG+ LT+ LD ++ + + P+LA ++L FD+ + E L+ + KSK+
Sbjct: 69 AYYELYRRSTIGVTLTDALDTLISDEKIQPQLANRILNNFDRIIAENLKNENNLAKSKLV 128
Query: 59 IKGHLHTYRFCDNVWTFILQDALFK 83
KG L TYRFCD+VWTFI+++ + K
Sbjct: 129 FKGDLDTYRFCDDVWTFIIKNVIIK 153
>gi|7494874|pir||T15332 hypothetical protein B0336.5 - Caenorhabditis elegans
Length = 334
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI- 59
M+++ LYR +T+G L +TL++M G LT LA +VL QFDKSM + + K K++
Sbjct: 196 MSSYALYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFC 255
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSKLLS 105
L TYR+CDNVWTFIL + K + E + ++K+VACD + S
Sbjct: 256 ATQLLTYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGRQTS 303
>gi|403213875|emb|CCK68377.1| hypothetical protein KNAG_0A07240 [Kazachstania naganishii CBS
8797]
Length = 119
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ELYRRSTIG L + LD ++ +G + LA++VL FDK + E L SK+++KG L
Sbjct: 7 YELYRRSTIGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAENLRDNTGSKLTVKGDL 66
Query: 64 HTYRFCDNVWTFILQDALFKSEELQET-----------VGRVKIVACDSK 102
TY FCD+VWTFI+++ E V +++IVAC+SK
Sbjct: 67 DTYGFCDDVWTFIVKNCNVTVENTGNGAGNNGANDAIKVDKLRIVACNSK 116
>gi|149236972|ref|XP_001524363.1| transcription initiation factor IIA small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451898|gb|EDK46154.1| transcription initiation factor IIA small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 134
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 24/125 (19%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ---VKSKVS 58
A +ELYRRSTIG+ L + LD ++ + + P+LA ++L FD+ + E L+ K K++
Sbjct: 5 AYYELYRRSTIGVTLADALDTLISDEKIQPQLANRILNNFDRIIAENLKNDANIAKLKLT 64
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEE---------------------LQETVGRVKIV 97
KG L TYRFCD+VWTFI+++ + K + L+ V + KIV
Sbjct: 65 FKGDLDTYRFCDDVWTFIIKNVIVKLSDVGGGSNSNSNGNSNSNSNDNDLEINVDKFKIV 124
Query: 98 ACDSK 102
AC+S+
Sbjct: 125 ACNSR 129
>gi|268571771|ref|XP_002641144.1| Hypothetical protein CBG08996 [Caenorhabditis briggsae]
Length = 134
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI- 59
M+++ LYR +T+G L +TL++M +G L L +VL+QFDKSM + + K K++
Sbjct: 1 MSSYALYRGTTLGQALDQTLNDMEADGLLPKSLVSKVLMQFDKSMNKQISRLPKEKMNFC 60
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSK 102
L TYR+CDNVWTFIL + K + E + ++KIVACD +
Sbjct: 61 ATQLLTYRYCDNVWTFILNNVNLKDPQRSFDEPIEKLKIVACDGR 105
>gi|387912870|sp|C4QGM3.2|T2AG_SCHMA RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
Length = 104
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M E+YR +T+G L E LDEM+ + L P + +V+ +FD+ ++ AL +VK+++S++
Sbjct: 1 MTYHEMYRSTTLGTTLREALDEMLAHNLLQPGMDHKVMQKFDQCISNALAKRVKNRLSLR 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKI 96
GHL+TYR CDNVWT ++ D K TV +V +
Sbjct: 61 GHLNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKVSL 96
>gi|308497460|ref|XP_003110917.1| hypothetical protein CRE_04729 [Caenorhabditis remanei]
gi|308242797|gb|EFO86749.1| hypothetical protein CRE_04729 [Caenorhabditis remanei]
Length = 135
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI- 59
M+++ LYR +T+G L +TL++M + G L L +VL QFDKSM + + K K++
Sbjct: 1 MSSYALYRGTTLGQALEQTLNDMEEEGLLPKSLVSKVLNQFDKSMNKQISRLPKEKMNFC 60
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSK 102
L TYR+CDNVWTFIL + K + + + ++KIVACD +
Sbjct: 61 ASQLLTYRYCDNVWTFILNNVTLKDPQRSFDDPIDKLKIVACDGR 105
>gi|384250264|gb|EIE23744.1| transcription initiation factor IIA, gamma subunit [Coccomyxa
subellipsoidea C-169]
Length = 119
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M LYR S IG CL E LDEM+ + +L ++V+ +FD ++ +ALE V +K K
Sbjct: 1 MTMLTLYRTSKIGDCLAEALDEMITQDKIPGDLGMKVMAEFDSAIYKALEKDVTTKTLFK 60
Query: 61 GHLHTYRFCDNVWTFILQDALFK---------SEELQETVGRVKIVACDSKLLSQ 106
GHL +YR+CD VWT ++ D F+ S + ++K+V D +L Q
Sbjct: 61 GHLDSYRYCDQVWTMVMSDTNFRMETTGPGGSSRSSEVKADKIKLVCVDERLWQQ 115
>gi|341883902|gb|EGT39837.1| hypothetical protein CAEBREN_09207 [Caenorhabditis brenneri]
Length = 136
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSI- 59
M+++ LYR +T+G L +TL +M G L L ++L QFDKSM + + K KV
Sbjct: 1 MSSYALYRGTTLGQALEQTLSDMDDEGLLPKSLVNKILFQFDKSMNKQISRLPKEKVQFC 60
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEE--LQETVGRVKIVACDSK 102
L TYR+CDNVWTFIL + + + E V ++KIVACD +
Sbjct: 61 ATQLVTYRYCDNVWTFILNNVTLRDSQRSFDEPVDKLKIVACDGR 105
>gi|256084306|ref|XP_002578371.1| transcription initiation factor iia (tfiia) gamma chain
[Schistosoma mansoni]
Length = 132
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M E+YR +T+G L E LDEM+ + L P + +V+ +FD+ ++ AL +VK+++S++
Sbjct: 1 MTYHEMYRSTTLGTTLREALDEMLAHNLLQPGMDHKVMQKFDQCISNALAKRVKNRLSLR 60
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVK 95
GHL+TYR CDNVWT ++ D K TV + +
Sbjct: 61 GHLNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKAQ 95
>gi|24639006|ref|NP_569877.1| TfIIA-S-2 [Drosophila melanogaster]
gi|20140919|sp|Q9W5B9.1|T2AH_DROME RecName: Full=Transcription initiation factor IIA subunit 2-2;
AltName: Full=General transcription factor IIA subunit
2-2; AltName: Full=Transcription initiation factor IIA
gamma-2 chain; Short=TFIIA-gamma-2
gi|7290110|gb|AAF45575.1| TfIIA-S-2 [Drosophila melanogaster]
gi|285002274|gb|ADC32536.1| RT05689p [Drosophila melanogaster]
gi|294862340|gb|ADC32535.2| RT05676p [Drosophila melanogaster]
gi|358439616|gb|AEU10776.1| RT12102p1 [Drosophila melanogaster]
Length = 107
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG- 61
++ YR +T+G L +TLDEM++ G +T ++A VL+++DKS++ AL+ S +S
Sbjct: 2 NYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTAE 61
Query: 62 HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
L T+R CDNVWT IL+DA F+ ++ V VKIVAC
Sbjct: 62 RLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVAC 99
>gi|429862154|gb|ELA36813.1| transcription initiation factor iia small chain [Colletotrichum
gloeosporioides Nara gc5]
Length = 92
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 62/85 (72%), Gaps = 2/85 (2%)
Query: 20 LDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQD 79
LD+++ + P+LA+++L FD+++TEAL+ VK++++ KG L TYRFCD VWTF++++
Sbjct: 2 LDDLISEERIHPQLAMKILANFDQAITEALQKSVKARLTFKGSLSTYRFCDEVWTFLIKN 61
Query: 80 ALFKSEELQETVG--RVKIVACDSK 102
FK + + V +VKIV+C+SK
Sbjct: 62 VQFKLDSGGQMVSADKVKIVSCNSK 86
>gi|17556689|ref|NP_499644.1| Protein Y111B2A.13 [Caenorhabditis elegans]
gi|20140870|sp|Q9NEX2.2|T2AG_CAEEL RecName: Full=Transcription initiation factor IIA subunit 2;
AltName: Full=General transcription factor IIA subunit
2; AltName: Full=Transcription initiation factor IIA
gamma chain; Short=TFIIA-gamma
gi|13548465|emb|CAC35842.1| Protein Y111B2A.13 [Caenorhabditis elegans]
Length = 113
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
++LYR +T+G L +TLD+ V + + L+ +++ FDKS+ + L + K+KV+ +
Sbjct: 4 PNYQLYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRA 63
Query: 62 -HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
L YR+CDNVWTFI++ + TV R+KIVACD + Q
Sbjct: 64 DKLRAYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQTKGQ 109
>gi|71019177|ref|XP_759819.1| hypothetical protein UM03672.1 [Ustilago maydis 521]
gi|46099617|gb|EAK84850.1| hypothetical protein UM03672.1 [Ustilago maydis 521]
Length = 155
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 40/136 (29%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK--- 60
+ELYRRS+IGM LT+ LDE++Q+G + P LA++VL +FDK++ L VK+K +K
Sbjct: 12 YELYRRSSIGMQLTDALDELIQSGHINPVLAMRVLNEFDKAIATNLAKNVKAKSQLKVRL 71
Query: 61 ------------------------------------GHLHTYRFCDNVWTFILQDALFKS 84
GHL YR C+ VWTF +++A K
Sbjct: 72 LPSALACSLHSADILLDAFLLHHHRVRSTSLFALDQGHLKDYRLCEEVWTFRVRNATLKL 131
Query: 85 EELQ-ETVGRVKIVAC 99
+ + V +VKIVAC
Sbjct: 132 DNAEILDVDKVKIVAC 147
>gi|341875755|gb|EGT31690.1| hypothetical protein CAEBREN_20155 [Caenorhabditis brenneri]
gi|341897597|gb|EGT53532.1| hypothetical protein CAEBREN_10283 [Caenorhabditis brenneri]
Length = 115
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
++LYR +T+G L +TLD+ + + L+ +V+ FDKS+ L + K+KV+ +
Sbjct: 4 PNYQLYRNTTLGQALQKTLDDFISEQLIPESLSKKVMDSFDKSINRILPMKAKNKVNFRA 63
Query: 62 -HLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
L YR+CDNVWTFI++ + TV R+KIVACD +
Sbjct: 64 DKLRAYRYCDNVWTFIVEQVDLRDAVEGGTVARLKIVACDGQ 105
>gi|308465662|ref|XP_003095089.1| hypothetical protein CRE_20924 [Caenorhabditis remanei]
gi|308246135|gb|EFO90087.1| hypothetical protein CRE_20924 [Caenorhabditis remanei]
Length = 117
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
++LYR +T+G L +TLD+ V + L+ +V+ FDKS+ L + K+KV+ +
Sbjct: 4 PNYQLYRNTTLGQALQKTLDDFVSEQIIPDSLSKKVMDSFDKSINRILPMKAKNKVNFRA 63
Query: 62 H-LHTYRFCDNVWTFILQDALFKSE-ELQETVGRVKIVACDSKLLSQ 106
L YR+CDNVWTFI++ K + V R+KIVACD + Q
Sbjct: 64 EKLRAYRYCDNVWTFIVEQVDLKEAIDPNGPVNRLKIVACDGQTKGQ 110
>gi|268571417|ref|XP_002641038.1| Hypothetical protein CBG20129 [Caenorhabditis briggsae]
Length = 114
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
++LYR +T+G L +TLD+ V + L+ +V+ FDKS+ L + ++KV+ +
Sbjct: 4 PNYQLYRNTTLGEALQKTLDDFVSEQLIPENLSKKVMDSFDKSINRILPIKARNKVNFRA 63
Query: 62 -HLHTYRFCDNVWTFILQDALFKSE-ELQETVGRVKIVACDSKLLSQ 106
L YR+CDNVWTFI++ K E V R+KIVACD + Q
Sbjct: 64 DKLRAYRYCDNVWTFIVEQVDLKEAIEPNAPVNRLKIVACDGQTKGQ 110
>gi|355693874|gb|AER99481.1| proteinral transcription factor IIA, 2, 12kDa [Mustela putorius
furo]
Length = 67
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 53/66 (80%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRGS 61
Query: 63 LHTYRF 68
L+TYRF
Sbjct: 62 LNTYRF 67
>gi|159489518|ref|XP_001702744.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280766|gb|EDP06523.1| predicted protein [Chlamydomonas reinhardtii]
Length = 119
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+F++YR +++G L ET+++M Q LT E+A+ VL QFD SM++A++ V K ++K +
Sbjct: 2 SFQIYRNTSVGESLMETIEQMAQEEKLTEEIALAVLKQFDTSMSKAIKEFVTGKATMKAN 61
Query: 63 LHTYRFCDNVWTFILQDALFK-SEELQETVGRVKIVACDS 101
+ TY + +NVWTF L+ FK ++ ++ + +ACD+
Sbjct: 62 MKTYHYYENVWTFSLEKVEFKLNQAGNGSMNGAQSLACDT 101
>gi|429965972|gb|ELA47969.1| hypothetical protein VCUG_00552 [Vavraia culicis 'floridensis']
Length = 117
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+S IG L +T+++M+ N LTP A +L +FD+++ V+S ++ KG +
Sbjct: 2 YEFYRQSIIGKALQDTIEDMLGNSQLTPAQAKLILEKFDQAVPVVFGRTVQSNMNFKGGV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
+Y F D VW FI +D + VKIVACD+
Sbjct: 62 ESYNFVDGVWNFITRDFVMTINNKMVRCDYVKIVACDA 99
>gi|440492317|gb|ELQ74892.1| Transcription initiation factor IIA, gamma subunit
[Trachipleistophora hominis]
Length = 117
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+S IG L +T+++M+ N LTP A +L +FD+++ V+S ++ KG +
Sbjct: 2 YEFYRQSIIGKALQDTIEDMLSNSQLTPVQAKLILEKFDQAVPVVFGRTVQSNMNFKGGV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
+Y F D VW FI +D + VKIVACD+
Sbjct: 62 ESYNFVDGVWNFITRDFVMTINNKMVRCDYVKIVACDA 99
>gi|183213095|gb|ACC55210.1| transcription factor IIA small subunit alpha [Xenopus borealis]
Length = 70
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 41 FDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACD 100
FDK++ AL +V+++V+ +G L+TYRFCDNVWTF+L D F+ V +VKIVACD
Sbjct: 1 FDKAINSALAQRVRNRVNFRGSLNTYRFCDNVWTFVLNDVEFREVTDLVKVDKVKIVACD 60
Query: 101 SK 102
K
Sbjct: 61 GK 62
>gi|269862285|ref|XP_002650778.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863002|ref|XP_002651058.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863352|ref|XP_002651190.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269863609|ref|XP_002651283.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269865996|ref|XP_002652119.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866266|ref|XP_002652213.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866432|ref|XP_002652272.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|269866455|ref|XP_002652279.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062822|gb|EED41777.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062838|gb|EED41784.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062946|gb|EED41844.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220063121|gb|EED41937.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220064812|gb|EED42772.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220064978|gb|EED42867.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065194|gb|EED42997.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065633|gb|EED43279.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 113
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR + IG L +T+DE V++ +TPE IQ+ +FD+ + + ++ + + KG +
Sbjct: 3 YEFYRSTIIGRALLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRIFD-RITNTIGFKGKI 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
+Y F D VW F+ +D + + +KIVACD+
Sbjct: 62 VSYNFVDGVWKFLCKDLIVSINNTYYNIPYIKIVACDA 99
>gi|148700280|gb|EDL32227.1| mCG140073 [Mus musculus]
Length = 88
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 51/65 (78%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+ L E+LDE++Q+ +TP++A+QVL+QFDK++ AL +V+++V+ +G
Sbjct: 14 AYQLYRNTTLRNSLQESLDELIQSQHITPQIALQVLLQFDKAINSALAQRVRNRVNFRGS 73
Query: 63 LHTYR 67
L+TYR
Sbjct: 74 LNTYR 78
>gi|46121847|ref|XP_385477.1| hypothetical protein FG05301.1 [Gibberella zeae PH-1]
Length = 76
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 35 IQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQE--TVG 92
+++L FD+++TEAL+ VK+++ KG L TYRFCD VWTF++++ FK + + T
Sbjct: 1 MKILGNFDQAITEALQKNVKARLQFKGSLDTYRFCDEVWTFLIKNVTFKMDSGSQSITAN 60
Query: 93 RVKIVACDSK 102
+VKIV+C++K
Sbjct: 61 KVKIVSCNAK 70
>gi|452820322|gb|EME27366.1| transcription initiation factor TFIIA small subunit [Galdieria
sulphuraria]
Length = 113
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQ-VKSKVSI 59
M ++ YR ST+G+CL E L+E+ + T + +FD++M E L + V ++++
Sbjct: 1 MTYYQHYRLSTVGICLEEALEELKEKNIFTEAEVDMIRTKFDRAMAECLSSDSVDKQLTL 60
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQE--TVGRVKIVACD 100
KG LH YRFCDNVW ++DA K ++ E VG +K++ACD
Sbjct: 61 KGSLHHYRFCDNVWQLFVKDAEVKFDKKSEFTYVGPLKVIACD 103
>gi|269867205|ref|XP_002652520.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220062314|gb|EED41537.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 113
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR + IG +T+DE V++ +TPE IQ+ +FD+ + + ++ + + KG +
Sbjct: 3 YEFYRSTIIGRAXLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRIFD-RITNTIGFKGKI 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
+Y F D VW F+ +D + + +KIVACD+
Sbjct: 62 VSYNFVDGVWKFLCKDLIVSINNTYYNIPYIKIVACDA 99
>gi|393237931|gb|EJD45470.1| hypothetical protein AURDEDRAFT_165333 [Auricularia delicata
TFB-10046 SS5]
Length = 125
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 6 LYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHT 65
YR ++IG+ L ++LDE+V G + P+LA++V+ +FDK + V K I+GH+
Sbjct: 10 FYRFTSIGVSLLDSLDELVGEGKIPPQLAMKVMEKFDKIAAGKVPL-VDKKALIRGHVDF 68
Query: 66 YRFCDNVWTFILQDALF---------KSEELQETVGRVKIVACDS 101
YR D VW F+L DA K+ + T R+KIVA S
Sbjct: 69 YRGADEVWQFVLDDAQLWMEDEGRPSKTRKADATSSRLKIVAIKS 113
>gi|353231342|emb|CCD77760.1| putative transcription initiation factor iia (tfiia),gamma chain
[Schistosoma mansoni]
Length = 107
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 40 QFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVAC 99
+FD+ ++ AL +VK+++S++GHL+TYR CDNVWT ++ D K TV ++KIVAC
Sbjct: 3 KFDQCISNALAKRVKNRLSLRGHLNTYRNCDNVWTLVMNDVEIKDSSAIMTVDKIKIVAC 62
Query: 100 DSK 102
+ K
Sbjct: 63 EGK 65
>gi|449019240|dbj|BAM82642.1| similar to transcription factor IIA small subunit [Cyanidioschyzon
merolae strain 10D]
Length = 252
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ YR STIG+ L +TLDE++ G L A V QFD+++ L +V+ + ++G L
Sbjct: 42 YAHYRASTIGLTLEDTLDELLSAGHLQESEAALVWTQFDQAVARYLRRKVRQRSVLRGRL 101
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
Y DNVWTF+++ AL + E ET V+ + S L
Sbjct: 102 AHYNLRDNVWTFLVRHALLRLERKPETYAAVERLPRTSDL 141
>gi|399950014|gb|AFP65670.1| transcription initiation factor IIA gamma chain [Chroomonas
mesostigmatica CCMP1168]
Length = 117
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M+ F+ YR ST+G+ L ETL E+++ G + EL+ + FDK+M L VK K +IK
Sbjct: 1 MSLFQ-YRASTLGIQLEETLQELLKEGVIDLELSDFIRKHFDKAMMYVLNKWVKDKPTIK 59
Query: 61 GHLHTYRFCDNVWTFILQDALFK--SEELQETVGR-VKIVACDSKLLSQ 106
G L Y+ DNVW+F + + + L ++ +KIVAC++K++S+
Sbjct: 60 GKLKHYQNLDNVWSFYILSPEIRVSNHSLPVSISEPLKIVACENKIVSE 108
>gi|399949799|gb|AFP65456.1| transcription initiation factor IIA gamma chain [Chroomonas
mesostigmatica CCMP1168]
Length = 119
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M+ F+ YR ST+G+ L ETL E+++ G + EL+ + FDK+M L VK K +IK
Sbjct: 1 MSLFQ-YRASTLGIQLEETLQELLKEGVIDLELSDFIRKHFDKAMMYVLNKWVKDKPTIK 59
Query: 61 GHLHTYRFCDNVWTFILQDALFK--SEELQETVGR-VKIVACDSKLLSQ 106
G L Y+ DNVW+F + + + L ++ +KIVAC++K++S+
Sbjct: 60 GKLKHYQNLDNVWSFYILSPEIRVSNHSLPVSISEPLKIVACENKIVSE 108
>gi|330038424|ref|XP_003239593.1| transcription initiation factor IIA gamma chain [Cryptomonas
paramecium]
gi|327206517|gb|AEA38695.1| transcription initiation factor IIA gamma chain [Cryptomonas
paramecium]
Length = 123
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
F YR STIG+ L ETL E+++ + ++ V +FDK++ L+ VK K IKG L
Sbjct: 2 FVHYRLSTIGIQLEETLQELLKKKVINFDIIDFVKNEFDKAIINGLKKYVKDKPLIKGEL 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETV---GRVKIVACDSKL 103
Y+ CDNVW F + + K V G +KI+ACD KL
Sbjct: 62 KHYQNCDNVWIFEINNPQIKVSSYNLPVQFQGILKIIACDLKL 104
>gi|315046866|ref|XP_003172808.1| transcription initiation factor IIA gamma chain [Arthroderma
gypseum CBS 118893]
gi|311343194|gb|EFR02397.1| transcription initiation factor IIA gamma chain [Arthroderma
gypseum CBS 118893]
Length = 130
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A +ELYR S+IG+ LT+TLD+++ G + P+LA+++L FD+ +TE L +VK K+S KG
Sbjct: 5 AYYELYRGSSIGLSLTDTLDDLINEGRIEPQLAMKILSNFDRVITEVLADKVKCKLSFKG 64
Query: 62 ---HLHTYRFCDNV 72
LH R+ N+
Sbjct: 65 DTPRLHWRRYLVNI 78
>gi|149028860|gb|EDL84201.1| general transcription factor IIa 2, isoform CRA_e [Rattus
norvegicus]
gi|197245743|gb|AAI68727.1| Gtf2a2 protein [Rattus norvegicus]
Length = 61
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 47/60 (78%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ + +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRNY 61
>gi|432111319|gb|ELK34601.1| Transcription initiation factor IIA subunit 2 [Myotis davidii]
Length = 97
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 47/60 (78%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ + L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRSSL 62
>gi|387593319|gb|EIJ88343.1| hypothetical protein NEQG_01787 [Nematocida parisii ERTm3]
gi|387595968|gb|EIJ93590.1| hypothetical protein NEPG_01162 [Nematocida parisii ERTm1]
Length = 118
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
F+LYR S IG + ++E + + +TP+ +L FD ++ + T V +K++ K +
Sbjct: 2 FQLYRESNIGKAFQDMIEEKINSQIITPQQGSALLEMFDMAVEQVFNTSVHNKMNFKASI 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
+Y+ +VWTF+++ + ++ RVKIVACD+ + S+
Sbjct: 62 ISYKNFADVWTFVVKGFVMTIDDKIVRADRVKIVACDANINSE 104
>gi|393237930|gb|EJD45469.1| hypothetical protein AURDEDRAFT_165332 [Auricularia delicata
TFB-10046 SS5]
Length = 127
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 2 ATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKG 61
A E YR ST+G+ L +TLDE++ + LA+++L +FD + + L + + KV +KG
Sbjct: 5 AGDEHYRASTLGLALGDTLDELINEDKIPMALAMKILRKFDAAFAKQL-PEAEGKVGLKG 63
Query: 62 HLHTYRFCDNVWTFILQDA 80
H+ Y+ VWTF+L DA
Sbjct: 64 HIDYYQNSSEVWTFVLDDA 82
>gi|378754362|gb|EHY64396.1| hypothetical protein NERG_02567 [Nematocida sp. 1 ERTm2]
Length = 118
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
F+LYR S IG + ++E + + +TP+ +L FD ++ + T V +K++ K +
Sbjct: 2 FQLYRESNIGKAFQDMIEEKINSQIITPQQGSALLEMFDMAVEQVFNTSVHNKMNFKASI 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKLLSQ 106
+Y+ +VWTF+++ + ++ RVKIVACD+ + S+
Sbjct: 62 ISYKNFADVWTFVVKGFVMTIDDKIVRADRVKIVACDANINSE 104
>gi|300706857|ref|XP_002995663.1| hypothetical protein NCER_101372 [Nosema ceranae BRL01]
gi|239604851|gb|EEQ81992.1| hypothetical protein NCER_101372 [Nosema ceranae BRL01]
Length = 115
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+S IG L + +DE V+ LTP+ A +L +FD+S+ V +S KG +
Sbjct: 2 YEFYRQSVIGRALVDIIDEKVRQNLLTPKQAKFILEKFDESIPIVFNRSVTGTLSFKGKI 61
Query: 64 HTYRFCDNVWTFILQD-ALFKSEELQETVGRVKIVACDS 101
+Y + VW FI ++ ++ + E +T +KIVACD+
Sbjct: 62 CSYNHVEGVWKFIAKNFCMYVNNEYYKT-NLIKIVACDA 99
>gi|322712510|gb|EFZ04083.1| hypothetical protein MAA_01157 [Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 45/57 (78%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
+ELYRRS+IG+ LT+TLD+++ + P+LA+++L FD+++TEAL+ VKS++ K
Sbjct: 9 YELYRRSSIGLALTDTLDDLISEERINPQLAMKILGNFDQAITEALQKNVKSRLQFK 65
>gi|148694235|gb|EDL26182.1| mCG2938, isoform CRA_c [Mus musculus]
Length = 68
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 46/58 (79%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|116283680|gb|AAH28551.1| Gtf2a2 protein [Mus musculus]
Length = 76
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 46/58 (79%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|149028861|gb|EDL84202.1| general transcription factor IIa 2, isoform CRA_f [Rattus
norvegicus]
Length = 68
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 46/58 (79%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|28913741|gb|AAH48705.1| Gtf2a2 protein [Mus musculus]
gi|74143193|dbj|BAE24136.1| unnamed protein product [Mus musculus]
gi|148694234|gb|EDL26181.1| mCG2938, isoform CRA_b [Mus musculus]
Length = 114
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 46/58 (79%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 59
>gi|340960416|gb|EGS21597.1| transcription initiation factor iia small chain-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 142
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 30/129 (23%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK--- 60
++LYR ++G LT+ LDE++ N + P+LA++VL QFD+ + E L +VK++++ K
Sbjct: 8 YDLYRHGSLGATLTDALDELIGNEQIDPQLAMKVLSQFDRVIAETLSEKVKARLTFKVIT 67
Query: 61 ----------GHLHTYR--------FCDN-------VWTFILQDALFKSEELQETV--GR 93
G + + DN +WTF++++ FK + +T+ +
Sbjct: 68 TRVAVLLLLWGRVMSASSRDALQPTLLDNLSTRFKAIWTFLIRNVHFKLNDAGQTIQADK 127
Query: 94 VKIVACDSK 102
+KIV+C +K
Sbjct: 128 IKIVSCSAK 136
>gi|148694239|gb|EDL26186.1| mCG2938, isoform CRA_e [Mus musculus]
Length = 115
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 46/58 (79%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 3 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFR 60
>gi|269862783|ref|XP_002650973.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220065328|gb|EED43082.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 104
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 11 TIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCD 70
IG L +T+DE V++ +TPE IQ+ +FD+ + + ++ + + KG + +Y F D
Sbjct: 1 NIGRALLDTIDEKVRSNVITPEQGIQIAQKFDEVIPRIFD-RITNTIGFKGKIVSYNFVD 59
Query: 71 NVWTFILQDALFKSEELQETVGRVKIVACDS 101
VW F+ +D + + +KIVACD+
Sbjct: 60 GVWKFLCKDLIVSINNTYYNIPYIKIVACDA 90
>gi|149028854|gb|EDL84195.1| general transcription factor IIa 2, isoform CRA_a [Rattus
norvegicus]
Length = 71
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 48/63 (76%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
++LYR +T+G L E+LDE++Q+ +TP+LA+QVL+QFDK++ AL +V+++V+ +
Sbjct: 2 AYQLYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINSALAQRVRNRVNFRVR 61
Query: 63 LHT 65
+ +
Sbjct: 62 IFS 64
>gi|444730970|gb|ELW71339.1| Transcription initiation factor IIA subunit 2 [Tupaia chinensis]
Length = 141
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 35/99 (35%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
++LYR +T+G L E+LDE++Q G L
Sbjct: 3 YQLYRNTTLGNSLQESLDELIQ-----------------------------------GSL 27
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 28 NTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 66
>gi|350586727|ref|XP_003482259.1| PREDICTED: transcription initiation factor IIA subunit 2-like,
partial [Sus scrofa]
Length = 101
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 10 STIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFC 69
+T+G L TLDE+ + +T +LA+QVL+QFD+++ A +V+++V +G L+T RFC
Sbjct: 1 TTLGNSLQGTLDELTPSQQITLQLALQVLLQFDEAINSAYAQKVRNRVYFRGSLNTSRFC 60
Query: 70 DNVWTFILQDALFKSEELQETVGRVKIVACD 100
+NVWTF+L F+ V + K VACD
Sbjct: 61 NNVWTFVLDAVEFREVTELLKVDKAKTVACD 91
>gi|350586731|ref|XP_003360927.2| PREDICTED: transcription initiation factor IIA subunit 2-like [Sus
scrofa]
Length = 126
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 10 STIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFC 69
+T+G L TLDE+ + +T +LA+QVL+QFD+++ A +V+++V +G L+T RFC
Sbjct: 26 TTLGNSLQGTLDELTPSQQITLQLALQVLLQFDEAINSAYAQKVRNRVYFRGSLNTSRFC 85
Query: 70 DNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+NVWTF+L F+ V + K VACD
Sbjct: 86 NNVWTFVLDAVEFREVTELLKVDKAKTVACDDN 118
>gi|353238977|emb|CCA70905.1| hypothetical protein PIIN_04841 [Piriformospora indica DSM 11827]
Length = 158
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+++YR ST+G+ L +T+DE+V++ ++ E+A ++ ++D+S+ L +V SK S
Sbjct: 6 NWQIYRWSTVGLALLDTVDELVRDNMISVEMANIIMARYDESVCSTLRKKVDSKCSFTAK 65
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACDSKLLSQ 106
T+ D V+ F L++ FK E Q TV +KI A S L +
Sbjct: 66 CQTFNLVDEVYRFSLKNVRFKMEAGQVVTVPTMKITALKSGTLDE 110
>gi|401825362|ref|XP_003886776.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
hellem ATCC 50504]
gi|392997932|gb|AFM97795.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
hellem ATCC 50504]
Length = 113
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+ +G L + +DE V + LTP +L FD S+ V + +S KG +
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNVLTPNQGKYILEAFDLSVPVVFNRSVTNSMSFKGKV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
Y D VW F +D + G V IVACD+ +
Sbjct: 62 DFYNHVDGVWRFQTKDFVMSLNNEYFRAGDVNIVACDADI 101
>gi|396080891|gb|AFN82511.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
romaleae SJ-2008]
Length = 113
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+ +G L + +DE V + LTP +L FD S+ V + +S KG +
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNVLTPNQGKYILEAFDLSVPIVFNKSVTNSMSFKGKV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
Y D VW F +D + G V IVACD+ +
Sbjct: 62 DFYNHVDGVWRFQTKDFVMSLNNEYFRAGDVNIVACDADI 101
>gi|303388329|ref|XP_003072399.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
intestinalis ATCC 50506]
gi|303301539|gb|ADM11039.1| transcription initiation factor IIA subunit gamma [Encephalitozoon
intestinalis ATCC 50506]
Length = 113
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+ +G L + +DE V + L+P +L FD S+ V + +S KG +
Sbjct: 2 YEFYRQLMVGKALEKIIDEKVNSNMLSPNQGKYILEAFDLSVPVVFNKSVTNSMSFKGKV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
Y D VW F +D + + G V IVACD+ +
Sbjct: 62 DFYNHVDGVWRFQTKDFVMSLNNEYFSGGDVNIVACDADI 101
>gi|160331859|ref|XP_001712636.1| tfIIA-S [Hemiselmis andersenii]
gi|159766085|gb|ABW98311.1| tfIIA-S [Hemiselmis andersenii]
Length = 124
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+F YR STIG+ L ETL E++ G + +L+ + +FDK++ L+ VK K IKG
Sbjct: 2 SFAQYRVSTIGIELEETLQELLDEGVIDLDLSELIKKRFDKAIMTVLKKWVKDKPVIKGK 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVG---RVKIVACDSKLLSQ 106
L Y+ CDNVW F + + + V +KIVA DSKL+S+
Sbjct: 62 LKHYQNCDNVWVFHVSNPEIRVSSYSLPVQINESLKIVASDSKLISE 108
>gi|402471788|gb|EJW05342.1| hypothetical protein EDEG_00612 [Edhazardia aedis USNM 41457]
Length = 117
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ YR+S +G L E L++ + + +T + A ++ +FD + + V++ ++ KG +
Sbjct: 2 YTFYRKSLVGKALAEALEQKINDNEITAQQARAIMEKFDSVIPNVFQRTVQTNINFKGTV 61
Query: 64 HTYRFCDNVWTF-------ILQDALFKSEELQETVGRVKIVACDS 101
H+Y D VW F + + L +SE VKIVACD+
Sbjct: 62 HSYNHVDGVWKFSTTNFVMTVNNELIRSE-------FVKIVACDA 99
>gi|401881836|gb|EJT46118.1| transcription initiation factor iia small chain [Trichosporon
asahii var. asahii CBS 2479]
gi|406701081|gb|EKD04235.1| transcription initiation factor iia small chain [Trichosporon
asahii var. asahii CBS 8904]
Length = 53
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 43 KSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSE 85
+S+TE L+ VK K S+KGHL TYR CD+VWTF+++D F+ E
Sbjct: 6 QSLTECLQKGVKQKTSVKGHLSTYRLCDDVWTFVVKDPQFRME 48
>gi|414870154|tpg|DAA48711.1| TPA: hypothetical protein ZEAMMB73_035659 [Zea mays]
Length = 259
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%)
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVK 95
+GHLHT R CDNVWTFIL DA FKS E+QET+ +V
Sbjct: 65 EGHLHTNRVCDNVWTFILIDATFKSAEIQETLSKVN 100
>gi|414877984|tpg|DAA55115.1| TPA: hypothetical protein ZEAMMB73_975351, partial [Zea mays]
Length = 137
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVA 98
+GHLHT R DNVWTFIL DA FKS E+QET+ +V +++
Sbjct: 84 QGHLHTNRVYDNVWTFILTDATFKSAEIQETLSKVNLLS 122
>gi|344243803|gb|EGV99906.1| Transcription initiation factor IIA subunit 2 [Cricetulus griseus]
Length = 63
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%)
Query: 59 IKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
+KG L+TYRFCDNVWTF+L D F+ V +VKIVACD K
Sbjct: 12 LKGSLNTYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGK 55
>gi|290996342|ref|XP_002680741.1| predicted protein [Naegleria gruberi]
gi|284094363|gb|EFC47997.1| predicted protein [Naegleria gruberi]
Length = 130
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
LYR T+G+ L E+L ++ + ++ ++ +V+ +DK + AL ++ +KVS K
Sbjct: 17 INLYRHCTLGLKLNESLQDLKEQDKISEDVIERVMKVYDKCVCNALSNKLSNKVSFKAGC 76
Query: 64 HTYRFCDNVWTFILQDALFKSEELQ-ETVGRVKIVACD 100
T+ F +NV+ ++L D K + +T+ VK+VAC+
Sbjct: 77 TTFNFNNNVYVWMLNDVNLKMGNTKLDTLDFVKVVACE 114
>gi|308512819|gb|ADO33063.1| transcription initiation factor IIA gamma chain [Biston betularia]
Length = 55
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 55 SKVSIK-GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
S+++ K G L+TYRFCDNVWTF+L D F+ + V +VKIVACD K
Sbjct: 1 SRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQEVAKVDKVKIVACDGK 49
>gi|117297099|gb|ABK33246.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297101|gb|ABK33247.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297103|gb|ABK33248.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297105|gb|ABK33249.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297107|gb|ABK33250.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297109|gb|ABK33251.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297111|gb|ABK33252.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297113|gb|ABK33253.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297115|gb|ABK33254.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297117|gb|ABK33255.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297119|gb|ABK33256.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297121|gb|ABK33257.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297123|gb|ABK33258.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297125|gb|ABK33259.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297127|gb|ABK33260.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297129|gb|ABK33261.1| transcription factor IIA gamma subunit [Oryza sativa Indica
Group]
gi|117297131|gb|ABK33262.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297133|gb|ABK33263.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297135|gb|ABK33264.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297137|gb|ABK33265.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297139|gb|ABK33266.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297141|gb|ABK33267.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297143|gb|ABK33268.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297145|gb|ABK33269.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297147|gb|ABK33270.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297149|gb|ABK33271.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297151|gb|ABK33272.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297153|gb|ABK33273.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297155|gb|ABK33274.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297157|gb|ABK33275.1| transcription factor IIA gamma subunit [Oryza sativa Japonica
Group]
gi|117297159|gb|ABK33276.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297161|gb|ABK33277.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297163|gb|ABK33278.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297165|gb|ABK33279.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297167|gb|ABK33280.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297169|gb|ABK33281.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297171|gb|ABK33282.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297173|gb|ABK33283.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297175|gb|ABK33284.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297177|gb|ABK33285.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297179|gb|ABK33286.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297181|gb|ABK33287.1| transcription factor IIA gamma subunit [Oryza nivara]
gi|117297183|gb|ABK33288.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297185|gb|ABK33289.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297187|gb|ABK33290.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297189|gb|ABK33291.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297191|gb|ABK33292.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297193|gb|ABK33293.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297195|gb|ABK33294.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297197|gb|ABK33295.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297199|gb|ABK33296.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297201|gb|ABK33297.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297203|gb|ABK33298.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297205|gb|ABK33299.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297207|gb|ABK33300.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297209|gb|ABK33301.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297211|gb|ABK33302.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297213|gb|ABK33303.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297215|gb|ABK33304.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297217|gb|ABK33305.1| transcription factor IIA gamma subunit [Oryza rufipogon]
gi|117297219|gb|ABK33306.1| transcription factor IIA gamma subunit [Oryza barthii]
gi|290020262|gb|ADD22314.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020264|gb|ADD22315.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020266|gb|ADD22316.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020268|gb|ADD22317.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020270|gb|ADD22318.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020272|gb|ADD22319.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020274|gb|ADD22320.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020276|gb|ADD22321.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020278|gb|ADD22322.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020280|gb|ADD22323.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020282|gb|ADD22324.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020284|gb|ADD22325.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020286|gb|ADD22326.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020288|gb|ADD22327.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020290|gb|ADD22328.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020292|gb|ADD22329.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020294|gb|ADD22330.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020296|gb|ADD22331.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020298|gb|ADD22332.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020300|gb|ADD22333.1| transcription factor II A gamma subunit [Oryza barthii]
gi|290020302|gb|ADD22334.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020304|gb|ADD22335.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020306|gb|ADD22336.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020308|gb|ADD22337.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020310|gb|ADD22338.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020312|gb|ADD22339.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020314|gb|ADD22340.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020316|gb|ADD22341.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020318|gb|ADD22342.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020320|gb|ADD22343.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020322|gb|ADD22344.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020324|gb|ADD22345.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020326|gb|ADD22346.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020328|gb|ADD22347.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020330|gb|ADD22348.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020332|gb|ADD22349.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020334|gb|ADD22350.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020336|gb|ADD22351.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020338|gb|ADD22352.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020340|gb|ADD22353.1| transcription factor II A gamma subunit [Oryza glaberrima]
gi|290020342|gb|ADD22354.1| transcription factor II A gamma subunit [Oryza nivara]
Length = 25
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/25 (88%), Positives = 24/25 (96%)
Query: 61 GHLHTYRFCDNVWTFILQDALFKSE 85
GHLHTYRFCDNVWTFIL DA+FK+E
Sbjct: 1 GHLHTYRFCDNVWTFILTDAIFKNE 25
>gi|19073966|ref|NP_584572.1| TRANSCRIPTION INITIATION FACTOR IIA [Encephalitozoon cuniculi
GB-M1]
gi|19068608|emb|CAD25076.1| TRANSCRIPTION INITIATION FACTOR IIA [Encephalitozoon cuniculi
GB-M1]
gi|449329358|gb|AGE95631.1| transcription initiation factor IIa [Encephalitozoon cuniculi]
Length = 113
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+E YR+ +G L + +DE V L+P +L FD S+ V + +S KG +
Sbjct: 2 YEFYRQLMVGKVLEKIVDEKVNANVLSPNQGKHILETFDLSVPIVFNKSVTNSMSFKGKV 61
Query: 64 HTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
Y D VW F + G V IVACD+ +
Sbjct: 62 DFYNHVDGVWRFQTTGFVMSLNNEYFNAGEVNIVACDADI 101
>gi|449669761|ref|XP_002154588.2| PREDICTED: coiled-coil domain-containing protein 138-like [Hydra
magnipapillata]
Length = 475
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 61 GHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDSK 102
G L+TYRFCDNVWTF+L + F+ V +VKIVACD K
Sbjct: 21 GRLNTYRFCDNVWTFVLNNVTFREVGDAVKVDKVKIVACDGK 62
>gi|403367489|gb|EJY83569.1| Transcription initiation factor IIA subunit 2 [Oxytricha trifallax]
Length = 129
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEAL-ETQVKSKVSI 59
M+ +YR +TIG L ++L E+ + EL +VL FD + + E +K +
Sbjct: 1 MSQLTIYRETTIGAALKDSLKELET--QIGEELIGKVLESFDAVICDRFKEVNSNNKCKL 58
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
+G +Y CD+VW F+L K +++ E+ +IVA D+
Sbjct: 59 QGKCISYNNCDDVWLFLLDSCSIKGDDIDESAKNCRIVATDT 100
>gi|162606312|ref|XP_001713186.1| transcription initiation factor IIA gamma chain [Guillardia theta]
gi|4583664|emb|CAB40402.1| transcription initiation factor IIA gamma chain [Guillardia theta]
Length = 128
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 3 TFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
TF + ST+G+ L ETL E++ + ++ + ++F + +L+ ++K K +KG
Sbjct: 2 TFWHFNVSTVGIELNETLHELLIANVINQDILNIIKMEFQVAFLSSLKKKIKDKPILKGK 61
Query: 63 LHTYRFCDNVWTFILQDALFKSEELQETVG---RVKIVACDSK 102
L Y+ CDNVW F + + K+ + +KIVA D+K
Sbjct: 62 LLHYQNCDNVWMFFVTNPEIKNNNYSLPINLKKPLKIVAYDNK 104
>gi|414877986|tpg|DAA55117.1| TPA: hypothetical protein ZEAMMB73_975351 [Zea mays]
Length = 98
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%)
Query: 60 KGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVA 98
KGHLHT R DNVWTFIL DA FKS E+QET+ ++ + A
Sbjct: 5 KGHLHTNRVYDNVWTFILTDATFKSAEIQETLSKMGLNA 43
>gi|407926414|gb|EKG19381.1| Transcription initiation factor IIA gamma subunit [Macrophomina
phaseolina MS6]
Length = 133
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQV--KSKVSIKG-HL 63
YR ++IG+ L TLDE+ + P+LA +V FD+ + AL + K +++ K
Sbjct: 10 YRGTSIGLALIATLDEL---PAIPPQLAEKVRRHFDREVLIALRSHRINKKRMNFKAVRC 66
Query: 64 HTYRFCDNVWTFILQDALFKSE 85
HTYRF D+ W F+L+D K++
Sbjct: 67 HTYRFYDDRWLFVLKDVKVKTD 88
>gi|326436048|gb|EGD81618.1| hypothetical protein PTSG_02335 [Salpingoeca sp. ATCC 50818]
Length = 102
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIK 60
M+ + YR++++G+ L LDE+++ +++P+L VL FD +M + L + VK + +K
Sbjct: 1 MSVNDHYRKTSLGLALQAALDELLEAQSISPDLMNHVLENFDTTMVKRL-SNVKHRADLK 59
Query: 61 GHLHTYRFCDNVWTFILQDALF---KSEELQ 88
Y+ + WT L+D F K+EEL
Sbjct: 60 ALCKEYKNMKDFWTISLKDCKFTFSKAEELH 90
>gi|320165249|gb|EFW42148.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 83
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 5 ELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLH 64
EL+R + +G L + L+EMV G L +LA++VL FD+ + L T+V+SK++ K +
Sbjct: 3 ELFRETVLGKALIDILNEMVHAGALQSKLALEVLEHFDQVVEHTLNTEVRSKINFKFRID 62
Query: 65 TYRFCD 70
D
Sbjct: 63 NENITD 68
>gi|429962754|gb|ELA42298.1| hypothetical protein VICG_00698 [Vittaforma corneae ATCC 50505]
Length = 113
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 7 YRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTY 66
Y ++ + L ETLD V+ LTP A VL +F +++ + V + +S K + TY
Sbjct: 5 YLQTLVARALIETLDVKVRENVLTPTQAQFVLSKFYEAVPKVFNASVANTMSFKAKMLTY 64
Query: 67 RFCDNVWTFILQDALFKSEELQETVGRVKIVACDSKL 103
+ D VW FI +D ++I+A D+ +
Sbjct: 65 NYVDGVWKFIAKDFGMSINNKVYRTDFIRIIARDADI 101
>gi|328853588|gb|EGG02726.1| hypothetical protein MELLADRAFT_91156 [Melampsora larici-populina
98AG31]
Length = 63
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 37 VLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKI 96
+LV DKS ++ L TQ+ S IKGHL TYR CD V E++ V RVKI
Sbjct: 1 MLVHLDKSASQVLSTQLCSNCQIKGHLSTYRLCDEVC----------GEQIGP-VKRVKI 49
Query: 97 VAC 99
VAC
Sbjct: 50 VAC 52
>gi|117582739|gb|ABK41653.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582741|gb|ABK41654.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582743|gb|ABK41655.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582745|gb|ABK41656.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582747|gb|ABK41657.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582749|gb|ABK41658.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582751|gb|ABK41659.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582753|gb|ABK41660.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582755|gb|ABK41661.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582757|gb|ABK41662.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582759|gb|ABK41663.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582761|gb|ABK41664.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582763|gb|ABK41665.1| transcription factor II A gamma subunit [Oryza officinalis]
gi|117582765|gb|ABK41666.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582767|gb|ABK41667.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582769|gb|ABK41668.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582771|gb|ABK41669.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582773|gb|ABK41670.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582775|gb|ABK41671.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582777|gb|ABK41672.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582779|gb|ABK41673.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582781|gb|ABK41674.1| transcription factor II A gamma subunit [Oryza eichingeri]
gi|117582783|gb|ABK41675.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582785|gb|ABK41676.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582787|gb|ABK41677.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582789|gb|ABK41678.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582791|gb|ABK41679.1| transcription factor II A gamma subunit [Oryza rhizomatis]
gi|117582793|gb|ABK41680.1| transcription factor II A gamma subunit [Oryza punctata]
gi|117582795|gb|ABK41681.1| transcription factor II A gamma subunit [Oryza punctata]
Length = 19
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/19 (94%), Positives = 18/19 (94%)
Query: 61 GHLHTYRFCDNVWTFILQD 79
GHLHTYRFCDNVWTFIL D
Sbjct: 1 GHLHTYRFCDNVWTFILTD 19
>gi|440640245|gb|ELR10164.1| hypothetical protein GMDG_04558 [Geomyces destructans 20631-21]
Length = 149
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 6 LYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHT 65
+Y +++ L +T+D+++ G + P+L ++L F S+ +A V+ V++KG L
Sbjct: 10 VYFHTSLCKTLCDTIDDLICAGRIEPQLGAKLLKNFVPSVKKAFAEHVREVVNMKGRLQY 69
Query: 66 YRFCDNVWTFILQDALFK 83
YR ++ W ++++D K
Sbjct: 70 YRNYEDKWWWVVRDCTVK 87
>gi|367038069|ref|XP_003649415.1| hypothetical protein THITE_2084589 [Thielavia terrestris NRRL 8126]
gi|346996676|gb|AEO63079.1| hypothetical protein THITE_2084589 [Thielavia terrestris NRRL 8126]
Length = 136
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 1 MATFELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSK--VS 58
MA +Y + T+ LT+ LD+++ + P+LA V+ + K M V++ V
Sbjct: 1 MADNSVYDKCTLLTALTDALDDLILEQKIEPQLANIVVSKMRKVMVHKFGALVRNSGTVE 60
Query: 59 IKGHLHTYRFCDNVWTFILQDA---LFKSEELQETVGRVKI------VAC-DSKLLSQ 106
I G L +Y D++W F L+DA L + E + + R I +AC SK+ S+
Sbjct: 61 ITGQLLSYNHYDHIWIFRLRDAKLVLATAPEGRAMIPRPTIDAGKLNIACGPSKMASE 118
>gi|300176949|emb|CBK25518.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 5 ELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVK--SKVSIKGH 62
++YR S +G L L +MVQ G +T E V+++FD SM++ L + + ++G
Sbjct: 7 KVYRFSELGSSLNSALTKMVQEGKITEEQKELVMLKFDNSMSQELSRRRNELPRAQLRGD 66
Query: 63 LHTYRFCDNVWTFIL 77
+ Y+ + W+F L
Sbjct: 67 IQFYKRLYDTWSFSL 81
>gi|403223635|dbj|BAM41765.1| uncharacterized protein TOT_040000147 [Theileria orientalis
strain Shintoku]
Length = 150
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALET--QVKSKVSIKG 61
+ L +R+ + L +TLD+MV+ LT E + ++L + K L+ + K+ + G
Sbjct: 11 YNLIKRTFLIESLKDTLDQMVEGYYLTKESSDRILNEAVKEYQITLKNNKHLFCKILVFG 70
Query: 62 HLHTYRFCDNVWTFILQDAL 81
L Y++ DN+WTF L+D L
Sbjct: 71 QLGQYKYLDNMWTFNLKDPL 90
>gi|167383832|ref|XP_001736697.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900824|gb|EDR27057.1| hypothetical protein EDI_000820 [Entamoeba dispar SAW760]
Length = 119
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 6 LYRRSTIGMCLTETLDEMVQNGT---LTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+YR++ G L+ D N T L+ +L Q V+FD++ E + V+S IKG
Sbjct: 10 IYRKTYCGFALSNAFDSFETNNTSAVLSTDLREQFNVEFDRAFIETFQNHVQSTTHIKGS 69
Query: 63 LHTYRFCDN-VWTFILQDALFKSE 85
+ Y+ D W F +++ K++
Sbjct: 70 GY-YKSTDGEFWEFTIKNPEIKTD 92
>gi|183230299|ref|XP_657046.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802967|gb|EAL51662.2| hypothetical protein EHI_110360 [Entamoeba histolytica HM-1:IMSS]
gi|407036779|gb|EKE38336.1| hypothetical protein ENU1_170070 [Entamoeba nuttalli P19]
gi|449703487|gb|EMD43929.1| Hypothetical protein EHI5A_021170 [Entamoeba histolytica KU27]
Length = 119
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 6 LYRRSTIGMCLTETLDEMVQNGT---LTPELAIQVLVQFDKSMTEALETQVKSKVSIKGH 62
+YR++ G L+ D N T L+ +L Q V+FD++ E + +S IKG
Sbjct: 10 IYRKTYCGFALSNAFDSFETNNTSAILSTDLREQFNVEFDRAFIETFQNHAQSTTHIKGS 69
Query: 63 LHTYRFCDN-VWTFILQDALFKSE 85
+ Y+ D W F +++ KS+
Sbjct: 70 GY-YKSTDGEFWEFTIKNPEIKSD 92
>gi|161899105|ref|XP_001712779.1| TFIIA subunit gamma [Bigelowiella natans]
gi|75756272|gb|ABA27167.1| TFIIA subunit gamma [Bigelowiella natans]
Length = 124
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
F +YR S IG+ L L E+ + + L ++L +D+ + L+ +V + IKG +
Sbjct: 14 FTIYRSSKIGISLISVLIELYKKRKIRTALIFRILNMYDQYINFLLKKKVCNTAKIKGVV 73
Query: 64 HTYRFCDNVWTFILQDALFKS 84
Y D +W D FK+
Sbjct: 74 EEYSNIDKIWYLTSLDFKFKT 94
>gi|193875776|gb|ACF24524.1| transcription initiation factor IIa gamma subunit [Gymnochlora
stellata]
Length = 124
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSKVSIKGHL 63
+ +YR + +G+ L TL + + + L ++L +FD+ M L+ ++ S IK +
Sbjct: 7 YTMYRSTKVGITLIHTLIHLYKKNKIRTFLIFKILNKFDQYMHYLLKKRIASFSVIKALV 66
Query: 64 HTYRFCDNVW 73
Y+ D++W
Sbjct: 67 DEYKHIDDIW 76
>gi|269865586|ref|XP_002651975.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
gi|220063386|gb|EED42080.1| transcription initiation factor IIA, gamma subunit [Enterocytozoon
bieneusi H348]
Length = 72
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 52 QVKSKVSIKGHLHTYRFCDNVWTFILQDALFKSEELQETVGRVKIVACDS 101
++ + + KG + +Y F D VW F+ +D + + +KIVACD+
Sbjct: 9 RITNTIGFKGKIVSYNFVDGVWKFLCKDLIVSINNTYYNIPYIKIVACDA 58
>gi|123422687|ref|XP_001306224.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121887786|gb|EAX93294.1| hypothetical protein TVAG_276990 [Trichomonas vaginalis G3]
Length = 118
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 4 FELYRRSTIGMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALETQVKSK-VSIKGH 62
F Y + IG L + LDEM Q L + + +F +S+T+A+E + K I+G+
Sbjct: 17 FNYYMGTPIGQALIKVLDEMKQARVLDDDTEYLIKREFKRSITQAMEEYQEGKECHIEGN 76
Query: 63 LHTYRFCDNVWTFILQDA 80
++F NV+ LQ A
Sbjct: 77 PVDFKFIYNVFNIKLQPA 94
>gi|85104097|ref|XP_961666.1| hypothetical protein NCU01054 [Neurospora crassa OR74A]
gi|18376175|emb|CAD21292.1| hypothetical protein [Neurospora crassa]
gi|28923214|gb|EAA32430.1| predicted protein [Neurospora crassa OR74A]
Length = 285
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 28 TLTPELAIQVLVQFDKSMTEALET--QVKSKVSI---KGHLHTYRFCDNVWTFILQD 79
+LT +L VL FD+ + + L T +V +K+ + KG L YR D++W ++D
Sbjct: 120 SLTQKLTDHVLTTFDRVIAQTLATHDEVINKIPVIKMKGKLKQYRLVDDIWKLWVED 176
>gi|403222043|dbj|BAM40175.1| uncharacterized protein TOT_020000437 [Theileria orientalis strain
Shintoku]
Length = 172
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 13 GMCLTETLDEMVQNGTLTPELAIQVLVQFDKSMTEALE--------TQVKSKVSIKGHLH 64
G+ L TL + + ++P++ +++ +++ E + + KS + IKG +
Sbjct: 74 GVSLQHTLQDFITKNVISPQVFYEIVEFHRQALYETINDIRKLQFSKKRKSPIKIKGKII 133
Query: 65 TYRFCDNVWTFILQDALFKSEELQETVGRVKI 96
Y+ D W F +Q ++++ T +KI
Sbjct: 134 NYKNEDRKWVFYIQSPKITIDKIKMTTNSMKI 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,363,008,757
Number of Sequences: 23463169
Number of extensions: 40356420
Number of successful extensions: 105450
Number of sequences better than 100.0: 395
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 104906
Number of HSP's gapped (non-prelim): 403
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)