Query 033997
Match_columns 106
No_of_seqs 102 out of 323
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 14:30:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/033997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/033997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ga3_A Interferon-induced heli 94.6 0.034 1.2E-06 39.6 3.8 87 9-99 12-100 (133)
2 3eqt_A ATP-dependent RNA helic 94.5 0.018 6.1E-07 41.5 2.3 92 7-100 11-104 (145)
3 3lrr_A Probable ATP-dependent 93.7 0.032 1.1E-06 39.0 2.2 89 6-98 2-94 (121)
4 2qfd_A Probable ATP-dependent 93.3 0.11 3.9E-06 37.3 4.6 80 7-98 25-116 (145)
5 3e0o_A Peptide methionine sulf 92.7 0.044 1.5E-06 39.5 1.7 67 7-81 40-106 (144)
6 2kv1_A Methionine-R-sulfoxide 92.6 0.07 2.4E-06 37.6 2.7 64 8-79 19-82 (124)
7 4a2v_A RIG-I, retinoic acid in 92.2 0.08 2.7E-06 37.5 2.5 89 6-98 4-97 (131)
8 3hcg_A Peptide methionine sulf 92.1 0.08 2.7E-06 38.2 2.5 68 7-81 41-108 (146)
9 2kao_A Methionine-R-sulfoxide 92.1 0.093 3.2E-06 37.0 2.7 65 7-79 18-82 (124)
10 3cxk_A Methionine-R-sulfoxide 91.5 0.062 2.1E-06 39.5 1.3 66 8-80 72-137 (164)
11 3mao_A Methionine-R-sulfoxide 91.3 0.076 2.6E-06 36.4 1.5 65 7-79 11-75 (105)
12 2k8d_A Peptide methionine sulf 89.7 0.069 2.4E-06 38.8 0.2 67 8-81 60-126 (151)
13 3hcj_A MSRB, peptide methionin 87.5 0.07 2.4E-06 38.9 -1.0 66 8-80 49-114 (154)
14 3e0m_A Peptide methionine sulf 87.0 0.2 6.9E-06 40.0 1.3 67 7-80 207-273 (313)
15 2l1u_A MSRB2, methionine-R-sul 84.2 0.25 8.7E-06 35.5 0.6 67 8-81 36-109 (143)
16 1fv5_A First zinc finger of U- 66.5 0.65 2.2E-05 25.1 -1.1 23 4-26 3-25 (36)
17 2elm_A Zinc finger protein 406 61.4 1.4 4.8E-05 22.2 -0.4 22 4-25 4-25 (37)
18 4gl2_A Interferon-induced heli 59.9 1.6 5.6E-05 35.6 -0.4 90 6-99 583-674 (699)
19 2lvu_A Zinc finger and BTB dom 62.6 2.1 7.2E-05 19.3 0.0 19 8-26 1-19 (26)
20 1srk_A Zinc finger protein ZFP 57.2 1.7 5.7E-05 21.2 -0.5 21 5-25 3-23 (35)
21 2elo_A Zinc finger protein 406 56.9 1.4 4.7E-05 21.8 -0.9 23 3-25 3-25 (37)
22 2elx_A Zinc finger protein 406 55.0 1.8 6.2E-05 20.9 -0.6 21 5-25 3-23 (35)
23 1x6m_A GFA, glutathione-depend 54.2 16 0.00053 26.3 4.2 50 31-81 63-114 (196)
24 2elp_A Zinc finger protein 406 52.4 3.1 0.00011 20.5 0.1 21 5-25 5-26 (37)
25 2elq_A Zinc finger protein 406 52.0 2.2 7.7E-05 20.9 -0.5 21 5-25 5-25 (36)
26 2elv_A Zinc finger protein 406 51.7 2.3 7.8E-05 20.8 -0.5 20 5-24 5-24 (36)
27 2m0e_A Zinc finger and BTB dom 50.2 3.2 0.00011 18.7 -0.1 19 8-26 1-19 (29)
28 2elt_A Zinc finger protein 406 48.7 2.6 9E-05 20.5 -0.6 21 5-25 5-25 (36)
29 2kvh_A Zinc finger and BTB dom 48.6 2.3 7.9E-05 19.4 -0.8 17 8-24 2-18 (27)
30 2yu5_A Zinc finger protein 473 48.5 4.3 0.00015 20.8 0.3 22 5-26 8-29 (44)
31 1rik_A E6APC1 peptide; E6-bind 47.7 3.3 0.00011 18.8 -0.3 18 8-25 1-18 (29)
32 1njq_A Superman protein; zinc- 47.6 2.7 9.3E-05 21.1 -0.6 21 6-26 3-23 (39)
33 2els_A Zinc finger protein 406 47.5 2.9 9.9E-05 20.4 -0.5 21 5-25 5-25 (36)
34 2epc_A Zinc finger protein 32; 47.3 3.3 0.00011 20.9 -0.3 22 5-26 7-28 (42)
35 2lvr_A Zinc finger and BTB dom 52.7 4.1 0.00014 18.6 0.0 19 8-26 2-20 (30)
36 2lvt_A Zinc finger and BTB dom 52.2 4.2 0.00014 18.6 0.0 19 8-26 1-19 (29)
37 2ely_A Zinc finger protein 224 46.3 5.8 0.0002 20.5 0.6 23 4-26 7-29 (46)
38 2eoy_A Zinc finger protein 473 46.1 5.1 0.00017 20.8 0.3 22 5-26 8-29 (46)
39 2yu8_A Zinc finger protein 347 45.3 5.3 0.00018 20.6 0.3 22 5-26 8-29 (46)
40 2ykg_A Probable ATP-dependent 44.8 16 0.00055 29.6 3.3 86 9-98 578-667 (696)
41 2en2_A B-cell lymphoma 6 prote 44.4 3.7 0.00013 20.8 -0.4 21 5-25 7-27 (42)
42 1p7a_A BF3, BKLF, kruppel-like 44.0 3 0.0001 20.4 -0.8 21 5-25 7-27 (37)
43 2elr_A Zinc finger protein 406 43.9 2.7 9.4E-05 20.4 -1.0 21 5-25 5-25 (36)
44 2yte_A Zinc finger protein 473 43.7 3.2 0.00011 21.0 -0.8 22 5-26 6-27 (42)
45 2kvf_A Zinc finger and BTB dom 43.7 3 0.0001 19.0 -0.8 18 8-25 2-19 (28)
46 2emb_A Zinc finger protein 473 43.4 4.3 0.00015 20.8 -0.3 21 5-25 8-28 (44)
47 2epw_A Zinc finger protein 268 43.3 5.9 0.0002 20.4 0.3 22 5-26 8-29 (46)
48 2el5_A Zinc finger protein 268 42.6 4.2 0.00014 20.5 -0.4 22 5-26 6-27 (42)
49 2eoo_A ZFP-95, zinc finger pro 42.5 4.6 0.00016 21.0 -0.2 22 4-25 7-28 (46)
50 2ept_A Zinc finger protein 32; 42.2 4 0.00014 20.6 -0.5 21 5-25 6-26 (41)
51 1nyp_A Pinch protein; LIM doma 42.2 7.2 0.00025 22.5 0.6 12 10-21 32-43 (66)
52 2m0d_A Zinc finger and BTB dom 42.1 3.4 0.00012 18.7 -0.7 18 8-25 2-19 (30)
53 2en3_A ZFP-95, zinc finger pro 42.1 6.3 0.00021 20.3 0.3 22 5-26 8-29 (46)
54 2eor_A Zinc finger protein 224 41.6 4.4 0.00015 20.9 -0.4 22 5-26 8-29 (46)
55 2eox_A Zinc finger protein 473 41.2 5.7 0.0002 20.3 0.0 22 5-26 8-29 (44)
56 2emj_A Zinc finger protein 28 41.0 4.8 0.00016 20.9 -0.3 21 5-25 8-28 (46)
57 2epv_A Zinc finger protein 268 40.8 4.8 0.00017 20.7 -0.3 21 5-25 8-28 (44)
58 2yts_A Zinc finger protein 484 40.8 4.6 0.00016 20.8 -0.4 22 5-26 8-29 (46)
59 2eow_A Zinc finger protein 347 40.7 5.1 0.00017 20.6 -0.2 21 5-25 8-28 (46)
60 2em8_A Zinc finger protein 224 40.7 4.7 0.00016 20.9 -0.4 22 4-25 7-28 (46)
61 2ctu_A Zinc finger protein 483 40.6 16 0.00054 20.1 1.9 23 5-27 14-36 (73)
62 2ytg_A ZFP-95, zinc finger pro 40.6 6.7 0.00023 20.2 0.2 22 5-26 8-29 (46)
63 2em7_A Zinc finger protein 224 40.4 5.1 0.00017 20.7 -0.3 22 4-25 7-28 (46)
64 2ytf_A Zinc finger protein 268 40.3 5 0.00017 20.7 -0.3 22 5-26 8-29 (46)
65 2emx_A Zinc finger protein 268 40.2 5.1 0.00017 20.5 -0.3 23 4-26 5-27 (44)
66 3iuf_A Zinc finger protein UBI 40.2 4.4 0.00015 21.7 -0.6 22 5-26 3-24 (48)
67 2eme_A Zinc finger protein 473 39.9 5.1 0.00018 20.6 -0.3 22 5-26 8-29 (46)
68 2iyb_E Testin, TESS, TES; LIM 39.7 6.8 0.00023 22.8 0.2 13 8-20 31-43 (65)
69 2emm_A ZFP-95, zinc finger pro 39.6 5.2 0.00018 20.6 -0.3 21 5-25 8-28 (46)
70 2em2_A Zinc finger protein 28 39.5 5.2 0.00018 20.7 -0.3 22 5-26 8-29 (46)
71 2eml_A Zinc finger protein 28 39.5 5.1 0.00017 20.7 -0.4 21 5-25 8-28 (46)
72 2eof_A Zinc finger protein 268 39.2 5.3 0.00018 20.3 -0.3 22 5-26 8-29 (44)
73 1klr_A Zinc finger Y-chromosom 39.2 4.2 0.00014 18.4 -0.7 18 9-26 2-19 (30)
74 2el4_A Zinc finger protein 268 39.2 5.3 0.00018 20.5 -0.3 22 5-26 8-29 (46)
75 2kvg_A Zinc finger and BTB dom 39.2 2.9 0.0001 19.2 -1.3 17 8-24 2-18 (27)
76 1iz6_A Initiation factor 5A; S 39.2 18 0.0006 25.0 2.3 32 29-60 33-64 (138)
77 2ep3_A Zinc finger protein 484 39.0 5.4 0.00018 20.6 -0.3 22 5-26 8-29 (46)
78 1vd4_A Transcription initiatio 39.0 12 0.0004 21.0 1.2 19 5-23 10-28 (62)
79 2emp_A Zinc finger protein 347 39.0 5.6 0.00019 20.5 -0.3 21 5-25 8-28 (46)
80 2enh_A Zinc finger protein 28 38.7 6 0.0002 20.5 -0.1 22 5-26 8-29 (46)
81 2eon_A ZFP-95, zinc finger pro 38.7 4.2 0.00014 21.2 -0.8 23 4-26 7-29 (46)
82 3fac_A Putative uncharacterize 38.7 18 0.00062 23.5 2.2 18 62-79 64-81 (118)
83 2yrj_A Zinc finger protein 473 38.7 5.7 0.00019 20.4 -0.2 21 5-25 8-28 (46)
84 1ogy_B Diheme cytochrome C NAP 38.6 12 0.00042 26.3 1.4 29 7-35 93-121 (130)
85 2enc_A Zinc finger protein 224 38.6 5.4 0.00018 20.6 -0.4 21 5-25 8-28 (46)
86 2em5_A ZFP-95, zinc finger pro 38.5 5.4 0.00018 20.7 -0.4 22 5-26 8-29 (46)
87 2ene_A Zinc finger protein 347 38.4 5.4 0.00019 20.6 -0.4 22 5-26 8-29 (46)
88 2em4_A Zinc finger protein 28 38.3 5.5 0.00019 20.6 -0.4 22 5-26 8-29 (46)
89 2emg_A Zinc finger protein 484 38.3 4.4 0.00015 21.0 -0.8 22 5-26 8-29 (46)
90 2enf_A Zinc finger protein 347 38.1 4.6 0.00016 20.9 -0.7 22 5-26 8-29 (46)
91 2ytp_A Zinc finger protein 484 38.0 5.9 0.0002 20.5 -0.3 21 5-25 8-28 (46)
92 2em3_A Zinc finger protein 28 38.0 5.6 0.00019 20.5 -0.4 22 5-26 8-29 (46)
93 2yso_A ZFP-95, zinc finger pro 38.0 5.7 0.0002 20.5 -0.3 21 5-25 8-28 (46)
94 2emi_A Zinc finger protein 484 37.9 5.8 0.0002 20.5 -0.3 21 5-25 8-28 (46)
95 1paa_A Yeast transcription fac 37.8 3.9 0.00013 18.7 -0.9 17 9-25 2-18 (30)
96 2emf_A Zinc finger protein 484 37.8 5.8 0.0002 20.5 -0.3 22 5-26 8-29 (46)
97 2ema_A Zinc finger protein 347 37.7 5.7 0.0002 20.5 -0.3 21 5-25 8-28 (46)
98 2ep2_A Zinc finger protein 484 37.6 5.7 0.00019 20.5 -0.4 22 5-26 8-29 (46)
99 2em9_A Zinc finger protein 224 37.6 5.8 0.0002 20.4 -0.3 22 5-26 8-29 (46)
100 2eq0_A Zinc finger protein 347 37.6 5.9 0.0002 20.4 -0.3 22 5-26 8-29 (46)
101 2ytj_A Zinc finger protein 484 37.5 5.6 0.00019 20.5 -0.4 21 5-25 8-28 (46)
102 1x61_A Thyroid receptor intera 37.1 11 0.00036 22.0 0.8 11 10-20 34-44 (72)
103 2m0f_A Zinc finger and BTB dom 37.1 4.2 0.00014 18.3 -0.9 18 8-25 1-18 (29)
104 2yth_A Zinc finger protein 224 37.0 4.8 0.00016 20.9 -0.7 22 5-26 8-29 (46)
105 2el6_A Zinc finger protein 268 37.0 6 0.00021 20.5 -0.3 22 5-26 8-29 (46)
106 2eos_A B-cell lymphoma 6 prote 36.8 4.8 0.00017 20.3 -0.7 22 5-26 7-28 (42)
107 2eif_A IF-5A, protein (eukaryo 36.8 21 0.00072 24.5 2.4 30 31-60 39-68 (136)
108 2ytb_A Zinc finger protein 32; 36.7 4.7 0.00016 20.3 -0.8 22 5-26 7-28 (42)
109 2yto_A Zinc finger protein 484 36.7 6.2 0.00021 20.4 -0.3 22 5-26 8-29 (46)
110 2ytk_A Zinc finger protein 347 36.6 5.8 0.0002 20.4 -0.4 21 5-25 8-28 (46)
111 2eop_A Zinc finger protein 268 36.5 5 0.00017 20.7 -0.7 22 5-26 8-29 (46)
112 3uk3_C Zinc finger protein 217 36.5 3.7 0.00013 22.1 -1.3 21 6-26 1-21 (57)
113 2eom_A ZFP-95, zinc finger pro 36.4 5 0.00017 20.9 -0.7 23 4-26 7-29 (46)
114 2emh_A Zinc finger protein 484 36.2 6.3 0.00022 20.3 -0.3 22 5-26 8-29 (46)
115 2eq4_A Zinc finger protein 224 36.1 5.3 0.00018 20.5 -0.6 22 5-26 8-29 (46)
116 2eoh_A Zinc finger protein 28 36.1 4.9 0.00017 20.8 -0.8 22 5-26 8-29 (46)
117 2en8_A Zinc finger protein 224 35.9 6.4 0.00022 20.2 -0.3 22 5-26 8-29 (46)
118 2ytn_A Zinc finger protein 347 35.6 5.3 0.00018 20.6 -0.7 22 5-26 8-29 (46)
119 2em6_A Zinc finger protein 224 35.6 5.5 0.00019 20.6 -0.6 22 5-26 8-29 (46)
120 2epx_A Zinc finger protein 28 35.5 5.3 0.00018 20.6 -0.7 22 5-26 8-29 (47)
121 2emy_A Zinc finger protein 268 35.5 6.5 0.00022 20.3 -0.3 22 5-26 8-29 (46)
122 2emz_A ZFP-95, zinc finger pro 35.1 5.3 0.00018 20.7 -0.7 22 4-25 7-28 (46)
123 2ysp_A Zinc finger protein 224 35.1 5.6 0.00019 20.5 -0.6 21 5-25 8-28 (46)
124 2en1_A Zinc finger protein 224 35.0 5.5 0.00019 20.5 -0.7 21 5-25 8-28 (46)
125 2emk_A Zinc finger protein 28 34.9 5.4 0.00018 20.7 -0.7 22 5-26 8-29 (46)
126 2yrm_A B-cell lymphoma 6 prote 34.8 4.7 0.00016 20.7 -1.0 22 5-26 6-27 (43)
127 2elz_A Zinc finger protein 224 34.7 5.6 0.00019 20.6 -0.7 22 5-26 8-29 (46)
128 2en9_A Zinc finger protein 28 34.7 5.5 0.00019 20.6 -0.7 22 5-26 8-29 (46)
129 2en7_A Zinc finger protein 268 34.2 4.6 0.00016 20.5 -1.1 22 5-26 8-29 (44)
130 2eoj_A Zinc finger protein 268 34.0 4.9 0.00017 20.5 -1.0 21 5-25 8-28 (44)
131 2ytq_A Zinc finger protein 268 33.9 5.9 0.0002 20.5 -0.7 22 5-26 8-29 (46)
132 2egq_A FHL1 protein; LIM domai 33.8 8.9 0.0003 22.7 0.0 11 11-21 17-27 (77)
133 2epz_A Zinc finger protein 28 33.4 6 0.0002 20.4 -0.7 22 5-26 8-29 (46)
134 1yui_A GAGA-factor; complex (D 33.3 6.3 0.00022 21.3 -0.7 21 5-25 20-40 (54)
135 3cpf_A Eukaryotic translation 33.3 22 0.00075 24.5 2.0 32 29-60 33-64 (138)
136 2en6_A Zinc finger protein 268 33.3 6 0.0002 20.4 -0.7 21 5-25 8-28 (46)
137 2ep1_A Zinc finger protein 484 33.2 5.1 0.00017 20.6 -1.0 22 5-26 8-29 (46)
138 1bkb_A Translation initiation 33.2 26 0.00091 23.9 2.4 31 30-60 36-66 (136)
139 2em0_A Zinc finger protein 224 33.1 6.2 0.00021 20.3 -0.7 22 5-26 8-29 (46)
140 2eoz_A Zinc finger protein 473 32.9 6.2 0.00021 20.4 -0.7 22 5-26 8-29 (46)
141 1x68_A FHL5 protein; four-and- 32.6 13 0.00045 22.0 0.7 11 10-20 36-46 (76)
142 2eod_A TNF receptor-associated 32.2 15 0.00053 20.4 0.9 18 6-23 33-51 (66)
143 2ytd_A Zinc finger protein 473 32.1 8.1 0.00028 19.8 -0.3 21 5-25 8-28 (46)
144 2epu_A Zinc finger protein 32; 32.0 5.6 0.00019 20.5 -1.0 21 5-25 8-28 (45)
145 2ep0_A Zinc finger protein 28 32.0 7.9 0.00027 19.9 -0.4 21 5-25 8-28 (46)
146 2d8z_A Four and A half LIM dom 31.9 12 0.0004 21.7 0.4 11 10-20 32-42 (70)
147 2eq3_A Zinc finger protein 347 31.7 5.1 0.00017 20.6 -1.2 22 5-26 8-29 (46)
148 1zr9_A Zinc finger protein 593 31.7 3 0.0001 29.0 -2.7 26 2-27 43-68 (124)
149 1ard_A Yeast transcription fac 31.5 4.5 0.00015 18.3 -1.3 18 8-25 1-18 (29)
150 2ehe_A Four and A half LIM dom 31.3 13 0.00044 22.3 0.5 17 11-27 17-33 (82)
151 2eln_A Zinc finger protein 406 31.3 7.8 0.00027 20.6 -0.5 21 5-25 5-27 (38)
152 1a7i_A QCRP2 (LIM1); LIM domai 31.3 20 0.0007 21.3 1.4 12 10-21 35-46 (81)
153 1wyh_A SLIM 2, skeletal muscle 31.1 18 0.00062 20.9 1.1 12 10-21 34-45 (72)
154 2eov_A Zinc finger protein 484 31.0 6.9 0.00023 20.1 -0.7 22 5-26 8-29 (46)
155 3er0_A Eukaryotic translation 30.9 34 0.0012 24.5 2.8 32 29-60 57-88 (167)
156 2eoe_A Zinc finger protein 347 30.8 5.3 0.00018 20.5 -1.2 22 5-26 8-29 (46)
157 2eq1_A Zinc finger protein 347 30.6 7 0.00024 20.1 -0.8 22 5-26 8-29 (46)
158 2eq2_A Zinc finger protein 347 30.5 5.4 0.00018 20.6 -1.2 22 5-26 8-29 (46)
159 2yti_A Zinc finger protein 347 30.4 5.3 0.00018 20.6 -1.3 22 5-26 8-29 (46)
160 2drp_A Protein (tramtrack DNA- 30.3 6.5 0.00022 21.8 -1.0 22 5-26 6-27 (66)
161 1x4l_A Skeletal muscle LIM-pro 30.2 14 0.00049 21.5 0.6 11 10-20 36-46 (72)
162 2cur_A Skeletal muscle LIM-pro 29.8 13 0.00045 21.5 0.3 11 10-20 32-42 (69)
163 2epq_A POZ-, at HOOK-, and zin 29.7 5 0.00017 20.7 -1.4 21 5-25 6-26 (45)
164 4a2w_A RIG-I, retinoic acid in 29.1 12 0.0004 32.7 0.0 67 9-79 812-882 (936)
165 2eou_A Zinc finger protein 473 29.0 7.3 0.00025 19.9 -0.8 22 5-26 8-29 (44)
166 2eoq_A Zinc finger protein 224 29.0 7.3 0.00025 20.0 -0.9 22 5-26 8-29 (46)
167 4gzn_C ZFP-57, zinc finger pro 28.7 8.5 0.00029 22.4 -0.7 21 5-25 28-48 (60)
168 2ytm_A Zinc finger protein 28 28.7 6.3 0.00021 20.5 -1.2 22 5-26 8-29 (46)
169 2ct1_A Transcriptional repress 28.4 11 0.00036 21.7 -0.3 22 5-26 11-32 (77)
170 2ytt_A Zinc finger protein 473 27.3 6.3 0.00021 20.4 -1.3 23 4-26 7-29 (46)
171 2ytr_A Zinc finger protein 347 27.3 6 0.00021 20.3 -1.4 22 5-26 8-29 (46)
172 3izc_U 60S ribosomal protein R 27.2 31 0.0011 24.9 2.0 36 27-62 54-96 (160)
173 1bbo_A Human enhancer-binding 26.9 10 0.00034 20.2 -0.6 21 5-25 25-45 (57)
174 2eps_A POZ-, at HOOK-, and zin 26.6 9.8 0.00034 20.6 -0.6 22 5-26 8-29 (54)
175 2d9h_A Zinc finger protein 692 26.6 10 0.00035 21.7 -0.6 21 5-25 3-23 (78)
176 1ncs_A Peptide M30F, transcrip 26.2 30 0.001 17.9 1.4 22 5-26 14-37 (47)
177 1jni_A NAPB;, diheme cytochrom 26.0 16 0.00056 25.3 0.3 28 7-34 92-119 (123)
178 1rim_A E6APC2 peptide; E6-bind 25.8 6.6 0.00023 19.0 -1.4 18 8-25 1-18 (33)
179 3hks_A EIF-5A-2, eukaryotic tr 25.5 42 0.0014 24.1 2.4 31 30-60 56-86 (167)
180 1g47_A Pinch protein; LIM doma 25.4 17 0.0006 21.3 0.3 16 11-26 13-28 (77)
181 1iml_A CRIP, cysteine rich int 24.7 27 0.00092 20.5 1.1 25 9-39 27-51 (76)
182 4ayb_P DNA-directed RNA polyme 24.6 26 0.00089 20.7 1.0 17 8-24 2-18 (48)
183 2cu8_A Cysteine-rich protein 2 24.4 19 0.00064 21.3 0.3 11 10-20 37-47 (76)
184 1x3h_A Leupaxin; paxillin fami 24.1 29 0.00099 20.5 1.2 12 10-21 42-53 (80)
185 3gox_A Restriction endonucleas 23.9 18 0.0006 27.2 0.2 18 58-77 163-180 (200)
186 1x6o_A Eukaryotic initiation f 23.7 38 0.0013 24.5 1.9 32 29-60 57-88 (174)
187 1va1_A Transcription factor SP 23.6 12 0.00043 18.3 -0.5 21 5-25 4-26 (37)
188 1x5w_A Zinc finger protein 64, 23.5 13 0.00043 20.9 -0.6 21 5-25 5-25 (70)
189 1bhi_A CRE-BP1, ATF-2; CRE bin 23.5 12 0.00042 18.2 -0.6 21 5-25 2-24 (38)
190 2yt9_A Zinc finger-containing 23.1 18 0.00062 21.1 0.1 22 5-26 3-24 (95)
191 3jyw_Q 60S ribosomal protein L 23.1 21 0.0007 24.6 0.4 34 28-61 54-94 (116)
192 1wig_A KIAA1808 protein; LIM d 23.0 28 0.00095 20.6 0.9 12 10-21 32-43 (73)
193 1twf_J DNA-directed RNA polyme 22.9 8.3 0.00028 24.5 -1.6 18 64-81 3-20 (70)
194 2adr_A ADR1; transcription reg 22.9 12 0.0004 20.2 -0.8 20 6-25 27-46 (60)
195 1znf_A 31ST zinc finger from X 22.7 7.9 0.00027 17.1 -1.4 17 9-25 1-17 (27)
196 1zfd_A SWI5; DNA binding motif 22.5 12 0.00043 17.3 -0.6 18 8-25 2-21 (32)
197 1f2i_G Fusion of N-terminal 17 21.8 14 0.00049 20.7 -0.6 10 8-17 48-57 (73)
198 1x6e_A Zinc finger protein 24; 21.8 14 0.0005 20.8 -0.6 21 5-25 10-30 (72)
199 2lt7_A Transcriptional regulat 21.7 12 0.00041 24.7 -1.0 23 4-26 17-39 (133)
200 1x6h_A Transcriptional repress 21.6 17 0.00058 20.8 -0.3 21 5-25 11-31 (86)
201 3mjh_B Early endosome antigen 21.5 9.5 0.00033 20.9 -1.3 18 9-26 5-22 (34)
202 2jr6_A UPF0434 protein NMA0874 21.4 32 0.0011 21.2 1.0 37 8-48 7-46 (68)
203 3sjl_A Methylamine utilization 21.2 20 0.00067 28.8 -0.1 31 3-33 22-60 (373)
204 2hf1_A Tetraacyldisaccharide-1 21.2 34 0.0012 21.0 1.1 35 9-47 8-45 (68)
205 2epp_A POZ-, at HOOK-, and zin 21.2 13 0.00045 22.3 -0.9 24 5-28 9-32 (66)
206 1x63_A Skeletal muscle LIM-pro 21.2 33 0.0011 20.3 1.0 16 11-26 17-32 (82)
207 1x4k_A Skeletal muscle LIM-pro 21.0 27 0.00091 20.1 0.5 13 12-24 8-20 (72)
208 2lv2_A Insulinoma-associated p 20.4 15 0.00052 22.8 -0.7 18 6-23 53-70 (85)
209 1v6g_A Actin binding LIM prote 20.4 33 0.0011 20.3 0.9 10 11-20 17-26 (81)
210 2dar_A PDZ and LIM domain prot 20.4 33 0.0011 20.9 0.9 9 11-19 27-35 (90)
211 2d8x_A Protein pinch; LIM doma 20.2 33 0.0011 19.7 0.8 12 10-21 32-43 (70)
212 2epr_A POZ-, at HOOK-, and zin 20.0 13 0.00046 19.3 -0.9 21 5-25 8-28 (48)
No 1
>3ga3_A Interferon-induced helicase C domain-containing protein 1, MDA5; innate immune receptor, RNA biniding, RLR, alternative splicing, antiviral defense; 1.45A {Homo sapiens} PDB: 2rqb_A
Probab=94.56 E-value=0.034 Score=39.56 Aligned_cols=87 Identities=11% Similarity=0.172 Sum_probs=53.5
Q ss_pred eEEcccCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEeecccc
Q 033997 9 LYSCCNCRNHVALHDDVISK--SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYERAYEET 86 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~e~s 86 (106)
.+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+..-+...+. ..+...-..|.|. |+..+|-....---+=
T Consensus 12 kllCrkC~~~~C~g~DIR~ie~~HhVnv~p~F--~~~y~~~~~~~~~k~-f~d~~~~g~I~C~-Cgq~WG~~m~yk~~~L 87 (133)
T 3ga3_A 12 TFLCKNCSVLACSGEDIHVIEKMHHVNMTPEF--KELYIVRENKALQKK-CADYQINGEIICK-CGQAWGTMMVHKGLDL 87 (133)
T ss_dssp EEEETTTCCEEEEGGGCEEETTTEEECCCTGG--GGSEEEECCTTTCEE-CSSCEEEEEEEET-TSCEEEEEEEETTEEE
T ss_pred EEEccCCCeeEEeccceEEeccceEEeeChhh--eeeEEecCCCCccch-hccccCCceEEEe-cCChhhhhEEeccccC
Confidence 48999999999999997433 2111112221 233434322222233 4667888899999 9999997665433333
Q ss_pred cccccceEEEEec
Q 033997 87 QKYKEGKFILEKS 99 (106)
Q Consensus 87 qkYKEGkfIlE~~ 99 (106)
=-.|.-.|++|-.
T Consensus 88 P~LkIksFVve~~ 100 (133)
T 3ga3_A 88 PCLKIRNFVVVFK 100 (133)
T ss_dssp EEECGGGEEEEET
T ss_pred ceEEEEEEEEEcC
Confidence 3456677777753
No 2
>3eqt_A ATP-dependent RNA helicase DHX58; innate immunity, RIG-I-like helicases, viral RNA detection, LGP2/dsRNA complex, ATP-binding, coiled coil; 2.00A {Homo sapiens} PDB: 2w4r_A 2rqa_A
Probab=94.51 E-value=0.018 Score=41.54 Aligned_cols=92 Identities=17% Similarity=0.228 Sum_probs=54.5
Q ss_pred CceEEcccCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEeecc
Q 033997 7 PRLYSCCNCRNHVALHDDVISK--SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYERAYE 84 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~e 84 (106)
.-.+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+..+|..-.....+...-..|.|..|+..+|-....---
T Consensus 11 ~vkllCrkC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~~~~k~f~d~~~~g~I~C~~Cgq~WG~~m~yk~~ 88 (145)
T 3eqt_A 11 HVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPNF--SNYYNVSRDPVVINKVFKDWKPGGVISCRNCGEVWGLQMIYKSV 88 (145)
T ss_dssp GCEEEETTTCCEEEEGGGEEEETTTEEEECCGGG--GGGEEEEEEECCCSSCCSSEEEEEEEEETTTCCEEEEEEEETTE
T ss_pred heEEECCCCCeeEEeccceEEeccceEEeeChhh--eeeEEeccCCCCCCcccccccCCcEEEchhhChhhHhhEEeccc
Confidence 3459999999999999997433 1110111111 23333322322211113455677889999999999976654433
Q ss_pred cccccccceEEEEecc
Q 033997 85 ETQKYKEGKFILEKSK 100 (106)
Q Consensus 85 ~sqkYKEGkfIlE~~~ 100 (106)
+==-.|.-.|++|-..
T Consensus 89 ~LP~LkIksFVve~~~ 104 (145)
T 3eqt_A 89 KLPVLKVRSMLLETPQ 104 (145)
T ss_dssp EEEEECGGGEEEEETT
T ss_pred cCceEeEEEEEEEcCC
Confidence 3444677778887643
No 3
>3lrr_A Probable ATP-dependent RNA helicase DDX58; innate immunity, viral RNA, RIG-I like receptors, antiviral ATP-binding, helicase, hydrolase; HET: ATP; 2.15A {Homo sapiens} PDB: 3lrn_A* 3og8_A 2rmj_A 3ncu_A*
Probab=93.68 E-value=0.032 Score=39.00 Aligned_cols=89 Identities=22% Similarity=0.344 Sum_probs=54.9
Q ss_pred CCceEEcccCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEe
Q 033997 6 GPRLYSCCNCRNHVALHDDVISK--SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCS--DCRVVLGWKYER 81 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 81 (106)
|+..+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+...+. .+. .-+.++-..|.|. .|+..+|-....
T Consensus 2 ~~~~llC~kC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 77 (121)
T 3lrr_A 2 ENKKLLCRKCKALACYTADVRVIEESHYTVLGDAF--KECFVSRPHPK-PKQ-FSSFEKRAKIFCARQNCSHDWGIHVKY 77 (121)
T ss_dssp CCEEEEETTTCCEEEEGGGEEEETTTEEEECSHHH--HTTEEEEECSS-CCE-ETTEEEEEEEEECSTTTCCEEEEEEEE
T ss_pred CCEEEECCCCCeEEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhheEEe
Confidence 56779999999999999997432 1111111111 22333322222 222 2356778889999 999999976654
Q ss_pred ecccccccccceEEEEe
Q 033997 82 AYEETQKYKEGKFILEK 98 (106)
Q Consensus 82 A~e~sqkYKEGkfIlE~ 98 (106)
---+==-.|.-.|++|-
T Consensus 78 k~~~LP~LkI~sfvve~ 94 (121)
T 3lrr_A 78 KTFEIPVIKIESFVVED 94 (121)
T ss_dssp TTEEEEEECGGGEEEEE
T ss_pred ccccCceEEEEEEEEEe
Confidence 43334456777788876
No 4
>2qfd_A Probable ATP-dependent RNA helicase DDX58; zinc finger, alternative splicing, antiviral defense, ATP- binding, hydrolase, immune response; 2.70A {Homo sapiens} PDB: 2qfb_A
Probab=93.27 E-value=0.11 Score=37.32 Aligned_cols=80 Identities=20% Similarity=0.396 Sum_probs=52.3
Q ss_pred CceEEcccCcCCCCCCCCe----------eeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCc
Q 033997 7 PRLYSCCNCRNHVALHDDV----------ISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCS--DCRVV 74 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~l----------iSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~ 74 (106)
.-.+.|++|.+.+++.+|| +.+.|. ..+.+..-+... ..-+...-..|+|. .|+..
T Consensus 25 ~v~llCrkC~~~~C~g~DIrvie~~HhV~v~p~F~----------~~y~v~~~~~~k--~f~d~~~~g~I~C~~~~Cg~~ 92 (145)
T 2qfd_A 25 NKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK----------ECFVSRPHPKPK--QFSSFEKRAKIFCARQNCSHD 92 (145)
T ss_dssp CCEEEETTTCCEEEEGGGEEEETTTEEEECSTTGG----------GTEEEEECSSCC--CCSSEEEEEEEEECSTTTCCE
T ss_pred ceEEEccCCCeeEEcccceeEecCCcEEecCcCce----------eeEEEcCCcccc--hhhceeCCceEEeCCcccCcc
Confidence 3459999999999999998 444554 222222111111 14445677899999 99999
Q ss_pred eeeEEEeecccccccccceEEEEe
Q 033997 75 LGWKYERAYEETQKYKEGKFILEK 98 (106)
Q Consensus 75 lGWkY~~A~e~sqkYKEGkfIlE~ 98 (106)
+|-.-.+---+-=-.|.-.|+||.
T Consensus 93 WG~~m~yk~~~lP~LkIksFVv~~ 116 (145)
T 2qfd_A 93 WGIHVKYKTFEIPVIKIESFVVED 116 (145)
T ss_dssp EEEEEEETTEEEEEECGGGEEEEC
T ss_pred hhceEEEccccCceEEEEEEEEEe
Confidence 987654433334456777888875
No 5
>3e0o_A Peptide methionine sulfoxide reductase MSRB; oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.88.1.3 PDB: 1xm0_A 2kzn_A
Probab=92.71 E-value=0.044 Score=39.54 Aligned_cols=67 Identities=18% Similarity=0.194 Sum_probs=42.3
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYER 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|.++|=++++ -|....|=.-.+.-+-+ .+...+|++ -|+.. ..|.|..|+..||=-...
T Consensus 40 ~G~Y~C~~Cg~pLF~S~~----KfdSg~GWPSF~~pi~~-~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 106 (144)
T 3e0o_A 40 EGLYVDIVSGKPLFTSKD----KFDSQCGWPSFTKPIEE-EVEEKLDTS--HGMIR-TEVRSRTADSHLGHVFND 106 (144)
T ss_dssp SEEEEETTTCCEEEETTT----BCCCTTSSCEESCCSTT-TEEEEEECC--TTSCE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEeCCCCcccccCcc----cccCCCCCcccCchhcc-ceEEeecCC--CCceE-EEEEcCCCCCccCCccCC
Confidence 347999999999987764 45555554443444433 333334432 24432 368999999999975543
No 6
>2kv1_A Methionine-R-sulfoxide reductase B1; MSRB1, SELR, metal-binding, nucleus, oxidoreductase, seleniu; NMR {Mus musculus}
Probab=92.64 E-value=0.07 Score=37.61 Aligned_cols=64 Identities=14% Similarity=0.278 Sum_probs=37.7
Q ss_pred ceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033997 8 RLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKY 79 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 79 (106)
-+|.|+.|.++|=++++= |....|=.-.++.+-.-.+-..+++. |.. ...|.|..|+..||=-.
T Consensus 19 G~Y~C~~Cg~pLF~S~~K----fdSg~GWPSF~~~i~~~~v~~~~d~~---~~~-r~Ev~C~~Cg~HLGHVF 82 (124)
T 2kv1_A 19 GVYVCAKCSYELFSSHSK----YAHSSPWPAFTETIHPDSVTKCPEKN---RPE-ALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp EEEEETTTCCBCCCTTSC----CCCCSSSCCBSCCCCCSSCEEEECSS---STT-CEEEECTTTTCCCEEEC
T ss_pred EEEEecCCCCcccccCCc----ccCCCCCceeecccccceEEEEeccC---Cce-EEEEEEecCCCccCCcc
Confidence 489999999999888763 54444433323333211111122221 211 35799999999999643
No 7
>4a2v_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 1.44A {Anas platyrhynchos} PDB: 4a2x_A
Probab=92.15 E-value=0.08 Score=37.47 Aligned_cols=89 Identities=20% Similarity=0.329 Sum_probs=51.3
Q ss_pred CCceEEcccCcCCCCCCCCeeee--eecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEe
Q 033997 6 GPRLYSCCNCRNHVALHDDVISK--SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCS--DCRVVLGWKYER 81 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~ 81 (106)
|...+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+..-+. .+. .-+.+.-..|.|. .|+..+|-....
T Consensus 4 ~~~kllCrkC~~~vC~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 79 (131)
T 4a2v_A 4 GQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAF--KERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKY 79 (131)
T ss_dssp -CCEEEETTTCCEEEEGGGEEEETTTEEEECSSGG--GGGEEEEECCC-CCC-TTSEEEEEEEEESCTTTCCEEEEEEEE
T ss_pred cceEEEccCCCeeEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhhhEee
Confidence 45679999999999999997332 1111111111 12223322221 222 2356778889999 999998875543
Q ss_pred eccc-ccccccceEEEEe
Q 033997 82 AYEE-TQKYKEGKFILEK 98 (106)
Q Consensus 82 A~e~-sqkYKEGkfIlE~ 98 (106)
---+ ==-.|.-.|++|-
T Consensus 80 k~~~~LP~LkIksFVve~ 97 (131)
T 4a2v_A 80 LTFDNLPVIKIKSFVMES 97 (131)
T ss_dssp TTEEEEEEECGGGEEECC
T ss_pred cCcccCceEeEEEEEEEe
Confidence 2211 2246677777775
No 8
>3hcg_A Peptide methionine sulfoxide reductase MSRA/MSRB; PILB, methionine sulfoxide reductase B, reduced form, disulfide bond; 1.82A {Neisseria meningitidis serogroup A} SCOP: b.88.1.3 PDB: 3hch_A* 1l1d_A
Probab=92.11 E-value=0.08 Score=38.23 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=41.9
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYER 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|.++|=++++ -|....|=.-.+.-+-.-.+...+|+++ |+.. ..|.|..|+..||=-...
T Consensus 41 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~s~--gm~R-tEV~C~~Cg~HLGHVF~D 108 (146)
T 3hcg_A 41 PGIYVDVVSGEPLFSSAD----KYDSGCGWPSFTRPIDAKSVTEHDDFSY--NMRR-TEVRSHAADSHLGHVFPD 108 (146)
T ss_dssp SEEEEETTTCCEEEEGGG----EECCSSSSCEESSCSSGGGEEEEEEEET--TEEE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEecCCCcccccCcc----cccCCCCChhhccccCCCceEEeecCCC--CcEE-EEEEeCCCCCccCceeCC
Confidence 348999999999877653 4555556544444432211222334332 4332 478999999999975543
No 9
>2kao_A Methionine-R-sulfoxide reductase B1; mouse reduced methionine sulfoxide reductase B1 (MSRB1) (SEC95Cys mutant, selenocysteine; NMR {Mus musculus} PDB: 2kv1_A
Probab=92.09 E-value=0.093 Score=36.98 Aligned_cols=65 Identities=15% Similarity=0.319 Sum_probs=37.9
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKY 79 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 79 (106)
+-+|.|+.|.++|=++++ -|....|=.-.++-+-.-.+...+|.. ++ .-..|.|..|+..||=-.
T Consensus 18 ~GiY~C~~Cg~pLF~S~~----KFdSG~GWPSF~~pi~~~~v~~~~D~~---~~-~RtEV~C~~Cg~HLGHVF 82 (124)
T 2kao_A 18 PGVYVCAKCSYELFSSHS----KYAHSSPWPAFTETIHPDSVTKCPEKN---RP-EALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp CCEEEESSSCCCCCCTTT----SCCCCCSSCCBSCCCCCSSCEEEECSS---CT-TCEEEECTTTTCCCEEEC
T ss_pred CEEEEeCCCCCccccCcc----cccCCCCChhhCccCCccceEEEecCC---CC-CEEEEEeCCCCCcCCccC
Confidence 348999999999988875 344444433333333211111111211 11 135899999999999755
No 10
>3cxk_A Methionine-R-sulfoxide reductase; structural genomics, MSRB, oxidoreductase, MIC labcard, PSI-2, protein structure initiative; 1.70A {Burkholderia pseudomallei strain} PDB: 3cez_A
Probab=91.46 E-value=0.062 Score=39.50 Aligned_cols=66 Identities=23% Similarity=0.457 Sum_probs=41.3
Q ss_pred ceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033997 8 RLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYE 80 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 80 (106)
-+|.|+.|.++|=++++ -|....|=.-.++-+-+-.+...+|+. -|+. -..|.|..|+..||=-..
T Consensus 72 GiY~C~~Cg~pLF~S~~----KFdSGcGWPSF~~pi~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 137 (164)
T 3cxk_A 72 GIYHCVVCGTALFESGA----KYHSGCGWPSYFKPIDGEVIDEKMDYT--HGMT-RVEVRCNQCGAHLGHVFE 137 (164)
T ss_dssp EEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSTTSEEEEEECG--GGCC-EEEEEETTTCCEEEEEES
T ss_pred eEEEccCCCccccCCch----hccCCCCCcccCcccCCCceEEeECCC--CCcE-EEEEEeCCCCCccCcccC
Confidence 48999999999977764 455555654444444322222333332 2442 446899999999997553
No 11
>3mao_A Methionine-R-sulfoxide reductase B1; oxidoreductase, structural genomics consortium, SGC, cytoplasm, metal-binding, nucleus, selenocysteine, zinc; HET: MLI; 1.42A {Homo sapiens}
Probab=91.26 E-value=0.076 Score=36.42 Aligned_cols=65 Identities=15% Similarity=0.341 Sum_probs=38.8
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEE
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKY 79 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY 79 (106)
+-+|.|+.|.++|=++++ -|....|=.-.+.-+-.-.+...+|.. ++ .-..|.|..|+..||=-.
T Consensus 11 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~~---~~-~RtEV~C~~C~~HLGHVF 75 (105)
T 3mao_A 11 PGVYVCAKCGYELFSSRS----KYAHSSPWPAFTETIHADSVAKRPEHN---RS-EALKVSCGKCGNGLGHEF 75 (105)
T ss_dssp SEEEEETTTCCEEEEGGG----EECCSSSSCEESCCSSTTSEEEEECTT---ST-TEEEEEETTTCCEEEEEE
T ss_pred CEEEEcCCCCCccccCCc----ccCCCCCChhhccccCCCceEEEecCC---CC-CEEEEEeCCCCCccCccc
Confidence 347999999999877663 455555554444433211111112211 11 235899999999999755
No 12
>2k8d_A Peptide methionine sulfoxide reductase MSRB; thermophilic, Zn binding, metal-binding, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=89.73 E-value=0.069 Score=38.76 Aligned_cols=67 Identities=21% Similarity=0.528 Sum_probs=41.8
Q ss_pred ceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033997 8 RLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYER 81 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 81 (106)
-+|.|+.|.++|=++++ -|....|=.-.+.-+-.-.+...+|+. -|+.. ..|.|..|+..||--...
T Consensus 60 G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~V~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 126 (151)
T 2k8d_A 60 GIYRCICCGTDLFDSET----KFDSGTGWPSFYDVVSEHNIKLREDRS--LGMVR-CEVLCARCDAHLGHVFDD 126 (151)
T ss_dssp SEEEETTTTEEEEEGGG----SCCSTTCCSEESCCSCTTSEECCCCBT--TSSCE-EEEEETTEEEEEEEEEEC
T ss_pred EEEEecCCCCcccCCcc----cccCCCCCcccCcccCCCceEEeeCCC--CCceE-EEEEeCCCCCcCCcccCC
Confidence 48999999999877753 465556644444444321222333332 23332 468999999999976543
No 13
>3hcj_A MSRB, peptide methionine sulfoxide reductase; methionine sulfoxide reductase B, oxidized form, oxidoreductase; 1.66A {Xanthomonas campestris PV} PDB: 3hci_A*
Probab=87.49 E-value=0.07 Score=38.88 Aligned_cols=66 Identities=20% Similarity=0.415 Sum_probs=38.0
Q ss_pred ceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033997 8 RLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYE 80 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 80 (106)
-+|.|+.|.++|=++++ -|....|=--.+.-+-.-.+...+|.+ -|+.. ..|.|..|+..||=-..
T Consensus 49 G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~ 114 (154)
T 3hcj_A 49 GVYTCRLCGLPLFRSNA----KFDSGTGWPSFFAPYDPAHVREIRDTS--YGMIR-TEIVCARCDSHLGHVFP 114 (154)
T ss_dssp EEEEETTTCCEEEEECT----TCCCCTTSSTTEEESCGGGEEEECCTT--TTTSC-EEEEETTTCCEEEEEES
T ss_pred EEEEccCCCCccccCcc----cccCCCCCcccccccCccceEEeecCC--CCceE-EEEEeCCCCCccCCccC
Confidence 48999999999977664 344444433333332211111122221 13321 47899999999997554
No 14
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=87.05 E-value=0.2 Score=40.00 Aligned_cols=67 Identities=13% Similarity=0.144 Sum_probs=40.6
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYE 80 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 80 (106)
+-+|.|+.|.++|=++++ -|....|=--.+.-+-.-.+...+|+++ |+. =..|.|..|+..||=-..
T Consensus 207 ~G~Y~c~~cg~pLF~S~~----KfdSg~GWPSF~~~i~~~~v~~~~D~s~--gm~-RtEv~c~~c~~HLGHVF~ 273 (313)
T 3e0m_A 207 EGIYVDITTGEPLFFAKD----KFASGCGWPSFSRPLSKELIHYYKDLSH--GME-RIEVRSRSGSAHLGHVFT 273 (313)
T ss_dssp SEEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSGGGEEEEEECCT--TCC-EEEEEESSSCCEEEEEES
T ss_pred CeEEEecCCCccccCCCc----cccCCCCCcccCcccCCCceEEeecCCC--CcE-EEEEECCCCCCccCcccC
Confidence 348999999999877653 4555555444344332111222233321 443 247899999999997554
No 15
>2l1u_A MSRB2, methionine-R-sulfoxide reductase B2, mitochondria; methionine sulfoxide reductase, oxidoreductase; NMR {Mus musculus}
Probab=84.24 E-value=0.25 Score=35.46 Aligned_cols=67 Identities=16% Similarity=0.347 Sum_probs=38.6
Q ss_pred ceEEcccCcCCCCCCCCeeeeeecCCCceEEEeeccc-------ccccCCccceeeceecEEEeeeecccCCCceeeEEE
Q 033997 8 RLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAM-------NIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYE 80 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~-------Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~ 80 (106)
-+|.|+.|.++|=++++ -|....|=.-.+.-+. .-.+...+|++ -|+. =..|.|..|+..||=-+.
T Consensus 36 G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF~~pi~~~~~~~~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 108 (143)
T 2l1u_A 36 GMYHCVCCDSPLFSSEK----KYCSGTGWPSFSEAYGSKGSDESHTGILRRLDTS--LGCP-RMEVVCKQCEAHLGHVFP 108 (143)
T ss_dssp EEEEESSSSCEEEEGGG----BCTTTTCCSBBSSCCSCCTTHHHHTCEEEEEECT--TSSC-EEEEEESSSCCCCEEEEC
T ss_pred eEEEeCCCCCeeecCcc----cccCCCCChhhchhhccccccCCCCceEEeeccc--CCce-EEEEEECCCCCcCCcccC
Confidence 47999999999877754 4554445433233221 00111122221 2333 246899999999997654
Q ss_pred e
Q 033997 81 R 81 (106)
Q Consensus 81 ~ 81 (106)
.
T Consensus 109 D 109 (143)
T 2l1u_A 109 D 109 (143)
T ss_dssp C
T ss_pred C
Confidence 3
No 16
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=66.45 E-value=0.65 Score=25.10 Aligned_cols=23 Identities=13% Similarity=0.372 Sum_probs=18.7
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
|.|+++|.|..|..-++..+.|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~ 25 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLE 25 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHcc
Confidence 56889999999998887766654
No 17
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.40 E-value=1.4 Score=22.15 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=15.8
Q ss_pred ccCCceEEcccCcCCCCCCCCe
Q 033997 4 MVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~l 25 (106)
-.|.++|.|..|..-++..+.|
T Consensus 4 H~~~k~~~C~~C~k~f~~~~~L 25 (37)
T 2elm_A 4 GSSGHLYYCSQCHYSSITKNCL 25 (37)
T ss_dssp SSSSCEEECSSSSCEEECHHHH
T ss_pred cCCCcCeECCCCCcccCCHHHH
Confidence 3567899999998766554433
No 18
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=59.87 E-value=1.6 Score=35.62 Aligned_cols=90 Identities=13% Similarity=0.165 Sum_probs=41.7
Q ss_pred CCceEEcccCcCCCCCCCCeee--eeecCCCceEEEeecccccccCCccceeeceecEEEeeeecccCCCceeeEEEeec
Q 033997 6 GPRLYSCCNCRNHVALHDDVIS--KSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYERAY 83 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~liS--k~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~A~ 83 (106)
......|.+|.+.++..+||-. .+-+=.-.++ |.....+. .+..-....-+......|.|. |+..+|-.+..--
T Consensus 583 ~~~~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~c~-~~~~~g~~~~~~~ 658 (699)
T 4gl2_A 583 SLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPE--FKELYIVR-ENKTLQKKCADYQINGEIICK-CGQAWGTMMVHKG 658 (699)
T ss_dssp CSEEEEESSSCCEEEEGGGCEEETTTEEECCCHH--HHHHCEEC----------------CEEECS-SSCEEEEECCCC-
T ss_pred ceeEEECCCCCcEEEehhheeeeccCceEeeCcc--hhhheeec-CCCccchhhhccccCCcEEee-cCchhhHHeeEcc
Confidence 3335789999999999988743 1111001111 12333332 222111124566777889999 9999987553322
Q ss_pred ccccccccceEEEEec
Q 033997 84 EETQKYKEGKFILEKS 99 (106)
Q Consensus 84 e~sqkYKEGkfIlE~~ 99 (106)
-+==-.|.=.|++|..
T Consensus 659 ~~~p~~~~~~~~~~~~ 674 (699)
T 4gl2_A 659 LDLPCLKIRNFVVVFK 674 (699)
T ss_dssp --CEEECGGGEEEEET
T ss_pred cccceeEEEEEEEEcC
Confidence 2222344555666653
No 19
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=62.62 E-value=2.1 Score=19.34 Aligned_cols=19 Identities=16% Similarity=0.504 Sum_probs=14.5
Q ss_pred ceEEcccCcCCCCCCCCee
Q 033997 8 RLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
++|.|..|+.-++..+.|.
T Consensus 1 kp~~C~~C~k~f~~~~~l~ 19 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLA 19 (26)
Confidence 4689999998877766654
No 20
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=57.20 E-value=1.7 Score=21.18 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=15.6
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+...+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~l 23 (35)
T 1srk_A 3 SGKRPFVCRICLSAFTTKANC 23 (35)
T ss_dssp SCCSCEECSSSCCEESSHHHH
T ss_pred CCCcCeeCCCCCcccCCHHHH
Confidence 356889999998877665544
No 21
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.91 E-value=1.4 Score=21.80 Aligned_cols=23 Identities=22% Similarity=0.340 Sum_probs=16.8
Q ss_pred cccCCceEEcccCcCCCCCCCCe
Q 033997 3 EMVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 3 ~l~g~~~y~C~~C~thLa~~~~l 25 (106)
--.|.++|.|..|..-++..+.|
T Consensus 3 ~h~~~k~~~C~~C~k~f~~~~~l 25 (37)
T 2elo_A 3 SGSSGRSYSCPVCEKSFSEDRLI 25 (37)
T ss_dssp CCCCCCCCEETTTTEECSSHHHH
T ss_pred CCCCCCCcCCCCCCCccCCHHHH
Confidence 34567889999998777665544
No 22
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=54.99 E-value=1.8 Score=20.88 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=15.4
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (35)
T 2elx_A 3 SGSSGYVCALCLKKFVSSIRL 23 (35)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCcchhCCHHHH
Confidence 356789999998776665544
No 23
>1x6m_A GFA, glutathione-dependent formaldehyde-activating ENZ; Zn-enzyme, 3_10 helix, lyase; 2.35A {Paracoccus denitrificans} SCOP: b.88.1.4 PDB: 1xa8_A*
Probab=54.24 E-value=16 Score=26.30 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=27.0
Q ss_pred cCCCceEEEeecc--cccccCCccceeeceecEEEeeeecccCCCceeeEEEe
Q 033997 31 QGRNGRAFLFSHA--MNIVVGPKEDRQLMTGLHTVADVFCSDCRVVLGWKYER 81 (106)
Q Consensus 31 ~G~~G~AyLf~~v--~Nv~~g~~~~r~m~TG~h~V~DI~C~~C~~~lGWkY~~ 81 (106)
.|+.-.++++-.. +.+..|+..-+...+|. .+.--||..|++.|-|..+.
T Consensus 63 ~Gs~f~~~~~vp~~~~~~~~G~~~l~~y~ss~-~~~r~FC~~CGs~l~~~~~~ 114 (196)
T 1x6m_A 63 EGAIFSQVAVVGRDALEVLEGAEKLEIVNAEA-PIQRHRCRDCGVHMYGRIEN 114 (196)
T ss_dssp TTCSSEEEEEEEGGGEEEEECGGGEEESCTTS-SEEEEEETTTCCEEEEEECC
T ss_pred cCCccEEEEEEehhHeEEecCCCceEEEeCCC-CeeeEECCCCCCcCCccccc
Confidence 3444444444322 23334554333323333 35667999999999876543
No 24
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.45 E-value=3.1 Score=20.46 Aligned_cols=21 Identities=19% Similarity=0.313 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCC-CCe
Q 033997 5 VGPRLYSCCNCRNHVALH-DDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~-~~l 25 (106)
.+.++|.|..|..-+... +.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L 26 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDL 26 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHH
T ss_pred CCCCCeECCCCChhhccCHHHH
Confidence 456889999998777665 443
No 25
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.97 E-value=2.2 Score=20.88 Aligned_cols=21 Identities=10% Similarity=0.384 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elq_A 5 SSGKPFKCSLCEYATRSKSNL 25 (36)
T ss_dssp CCCCSEECSSSSCEESCHHHH
T ss_pred CCCCCccCCCCCchhCCHHHH
Confidence 466889999998877665443
No 26
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.74 E-value=2.3 Score=20.85 Aligned_cols=20 Identities=25% Similarity=0.433 Sum_probs=14.4
Q ss_pred cCCceEEcccCcCCCCCCCC
Q 033997 5 VGPRLYSCCNCRNHVALHDD 24 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~ 24 (106)
.+.++|.|..|..-+...+.
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~ 24 (36)
T 2elv_A 5 SSGLLYDCHICERKFKNELD 24 (36)
T ss_dssp CCCCCEECSSSCCEESSHHH
T ss_pred CCCCCeECCCCCCccCCHHH
Confidence 45678999999876655443
No 27
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.21 E-value=3.2 Score=18.66 Aligned_cols=19 Identities=11% Similarity=0.321 Sum_probs=14.0
Q ss_pred ceEEcccCcCCCCCCCCee
Q 033997 8 RLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
++|.|..|...+.....|.
T Consensus 1 k~~~C~~C~~~f~~~~~l~ 19 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLK 19 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHH
T ss_pred CCCcCCCCCcccCCHHHHH
Confidence 3688999988877766553
No 28
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.68 E-value=2.6 Score=20.45 Aligned_cols=21 Identities=19% Similarity=0.521 Sum_probs=14.9
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 5 SSGKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHH
Confidence 456789999998766654443
No 29
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=48.61 E-value=2.3 Score=19.38 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=12.6
Q ss_pred ceEEcccCcCCCCCCCC
Q 033997 8 RLYSCCNCRNHVALHDD 24 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~ 24 (106)
++|.|..|..-+...+.
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSA 18 (27)
T ss_dssp CCEECSSSSCEESSHHH
T ss_pred cCccCCCcChhhCCHHH
Confidence 57999999877665443
No 30
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.55 E-value=4.3 Score=20.80 Aligned_cols=22 Identities=14% Similarity=0.536 Sum_probs=16.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQRNYLV 29 (44)
T ss_dssp SCCCSEECSSSSCEESSSHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999988777665553
No 31
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=47.69 E-value=3.3 Score=18.83 Aligned_cols=18 Identities=17% Similarity=0.510 Sum_probs=13.0
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|...++..+.|
T Consensus 1 k~~~C~~C~k~f~~~~~l 18 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHL 18 (29)
T ss_dssp CCEECSSSSCEESCSHHH
T ss_pred CCccCCCCCchhCCHHHH
Confidence 468999998777665544
No 32
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=47.61 E-value=2.7 Score=21.10 Aligned_cols=21 Identities=24% Similarity=0.569 Sum_probs=15.5
Q ss_pred CCceEEcccCcCCCCCCCCee
Q 033997 6 GPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+.++|.|..|..-+...+.|.
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHH
T ss_pred CCCceECCCCCcccCCHHHHH
Confidence 567899999987776655543
No 33
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.47 E-value=2.9 Score=20.43 Aligned_cols=21 Identities=10% Similarity=0.518 Sum_probs=15.1
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 5 SSGKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp SCCCCEECTTTCCEESSHHHH
T ss_pred CCCCCEECCCCCceeCCHHHH
Confidence 356789999998876654443
No 34
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=47.31 E-value=3.3 Score=20.90 Aligned_cols=22 Identities=18% Similarity=0.434 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 7 ~~~~~~~C~~C~k~f~~~~~l~ 28 (42)
T 2epc_A 7 GGETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999987776655443
No 35
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=52.68 E-value=4.1 Score=18.59 Aligned_cols=19 Identities=21% Similarity=0.534 Sum_probs=14.4
Q ss_pred ceEEcccCcCCCCCCCCee
Q 033997 8 RLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
++|.|..|...+.....|.
T Consensus 2 k~~~C~~C~k~f~~~~~l~ 20 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQ 20 (30)
Confidence 5799999988777666554
No 36
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=52.22 E-value=4.2 Score=18.60 Aligned_cols=19 Identities=16% Similarity=0.440 Sum_probs=14.1
Q ss_pred ceEEcccCcCCCCCCCCee
Q 033997 8 RLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
++|.|..|..-++....|.
T Consensus 1 k~~~C~~C~k~f~~~~~l~ 19 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLI 19 (29)
Confidence 3688999988777766654
No 37
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=46.34 E-value=5.8 Score=20.52 Aligned_cols=23 Identities=13% Similarity=0.426 Sum_probs=17.9
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.+.++|.|..|..-++..+.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ely_A 7 GTGEKPFKCVECGKGFSRRSALN 29 (46)
T ss_dssp CCCCCSBCCSSSCCCBSSTTHHH
T ss_pred CCCCCCcccCccCcccCCHHHHH
Confidence 35678899999998888776654
No 38
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.07 E-value=5.1 Score=20.77 Aligned_cols=22 Identities=9% Similarity=0.374 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoy_A 8 QKEKCFKCNKCEKTFSCSKYLT 29 (46)
T ss_dssp CCSCCEECSSSCCEESSSHHHH
T ss_pred CCCCCEECcCCCCcCCCHHHHH
Confidence 4678899999987766655543
No 39
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.27 E-value=5.3 Score=20.63 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=16.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yu8_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCSSEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCcCCchhCCHHHHH
Confidence 5678899999988777665553
No 40
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=44.84 E-value=16 Score=29.65 Aligned_cols=86 Identities=21% Similarity=0.344 Sum_probs=49.8
Q ss_pred eEEcccCcCCCCCCCCe--eeeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEEEeecc
Q 033997 9 LYSCCNCRNHVALHDDV--ISKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCS--DCRVVLGWKYERAYE 84 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~l--iSk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY~~A~e 84 (106)
...|.+|..+++..++| +..+.+=.-.++ |.+-+.+..- +..+. .-.......|+|. .|+..+|-.+.+---
T Consensus 578 ~~~c~~c~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~~ 653 (696)
T 2ykg_A 578 KLLCRKCKALACYTADVRVIEDCHYTVLGDA--FKECFVSRPH-PKPKQ-FSSFEKRAKIFCARQNCSHDWGIHVKYKTF 653 (696)
T ss_dssp EEEESSSCCEEEEGGGEEEETTTEEEECSTT--GGGTEEEEEE-EEEEE-CSSCEEEEEEEESSTTTCCEEEEEEEETTE
T ss_pred hhhccCCCceeeecchhhhhcCCCeeecCHH--hHhHeeeccC-Ccccc-ccccccCCceEeCCCCCCccccceEEEcce
Confidence 47899999999999885 322222222223 2222222211 11222 2334556788999 999999987744333
Q ss_pred cccccccceEEEEe
Q 033997 85 ETQKYKEGKFILEK 98 (106)
Q Consensus 85 ~sqkYKEGkfIlE~ 98 (106)
+==.+|...|++|-
T Consensus 654 ~lp~~~~~~~~~~~ 667 (696)
T 2ykg_A 654 EIPVIKIESFVVED 667 (696)
T ss_dssp EEEEECGGGEEEEE
T ss_pred ecceeeeeeEEEEe
Confidence 33345688888874
No 41
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.41 E-value=3.7 Score=20.76 Aligned_cols=21 Identities=19% Similarity=0.468 Sum_probs=15.8
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L 27 (42)
T 2en2_A 7 GGEKPYKCETCGARFVQVAHL 27 (42)
T ss_dssp CSSCSEECTTTCCEESSHHHH
T ss_pred CCCCCEeCCCcChhhCCHHHH
Confidence 567889999998776665544
No 42
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=44.04 E-value=3 Score=20.42 Aligned_cols=21 Identities=19% Similarity=0.592 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+...+.|
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~l 27 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSDHL 27 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHHHH
T ss_pred CCCCCccCCCCCcccCcHHHH
Confidence 467889999998877665443
No 43
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.87 E-value=2.7 Score=20.37 Aligned_cols=21 Identities=10% Similarity=0.208 Sum_probs=15.8
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~l 25 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSKGTL 25 (36)
T ss_dssp CCCSSCBCTTTCCBCSSHHHH
T ss_pred CCCCCeecCcCCCCcCchHHH
Confidence 456789999999877765544
No 44
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.72 E-value=3.2 Score=20.96 Aligned_cols=22 Identities=23% Similarity=0.733 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLV 27 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 5678899999988777655543
No 45
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=43.67 E-value=3 Score=18.97 Aligned_cols=18 Identities=33% Similarity=0.785 Sum_probs=13.0
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|...++..+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQM 19 (28)
T ss_dssp CSEECSSSCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998776655443
No 46
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.45 E-value=4.3 Score=20.79 Aligned_cols=21 Identities=19% Similarity=0.578 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2emb_A 8 HTRKRYECSKCQATFNLRKHL 28 (44)
T ss_dssp CCCSSEECTTTCCEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 567889999998776665544
No 47
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.25 E-value=5.9 Score=20.35 Aligned_cols=22 Identities=18% Similarity=0.549 Sum_probs=16.7
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCWKSQLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCCCCCCccCCHHHHH
Confidence 4678899999987777666554
No 48
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=42.64 E-value=4.2 Score=20.52 Aligned_cols=22 Identities=27% Similarity=0.662 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCccCCCcChhhCCHHHHH
Confidence 5678899999987776655543
No 49
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.50 E-value=4.6 Score=20.95 Aligned_cols=22 Identities=27% Similarity=0.643 Sum_probs=16.4
Q ss_pred ccCCceEEcccCcCCCCCCCCe
Q 033997 4 MVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~l 25 (106)
-.|.++|.|..|..-++..+.|
T Consensus 7 H~~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2eoo_A 7 GSGERPYGCNECGKNFGRHSHL 28 (46)
T ss_dssp CSCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCCEEccccCcccCCHHHH
Confidence 3567889999998777665554
No 50
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.23 E-value=4 Score=20.59 Aligned_cols=21 Identities=24% Similarity=0.665 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L 26 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQKGSL 26 (41)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCCcCCHHHH
Confidence 466889999998776665544
No 51
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=42.21 E-value=7.2 Score=22.47 Aligned_cols=12 Identities=17% Similarity=0.639 Sum_probs=8.2
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|..
T Consensus 32 F~C~~C~~~L~~ 43 (66)
T 1nyp_A 32 FVCAKCEKPFLG 43 (66)
T ss_dssp CBCTTTCCBCSS
T ss_pred CEECCCCCCCCC
Confidence 677777777753
No 52
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=42.13 E-value=3.4 Score=18.71 Aligned_cols=18 Identities=17% Similarity=0.386 Sum_probs=12.9
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|..-+.....|
T Consensus 2 k~~~C~~C~~~f~~~~~l 19 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSK 19 (30)
T ss_dssp CCEECTTTCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998766654443
No 53
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.07 E-value=6.3 Score=20.31 Aligned_cols=22 Identities=14% Similarity=0.475 Sum_probs=17.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCcccChhhCCHHHHH
Confidence 4678899999988777766554
No 54
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.65 E-value=4.4 Score=20.86 Aligned_cols=22 Identities=18% Similarity=0.519 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eor_A 8 TGEKPYNCEECGKAFIHDSQLQ 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCcCccCCCCCCCcCCHHHHH
Confidence 5678899999987776655543
No 55
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.17 E-value=5.7 Score=20.27 Aligned_cols=22 Identities=14% Similarity=0.369 Sum_probs=16.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (44)
T 2eox_A 8 TDSKSYNCNECGKAFTRIFHLT 29 (44)
T ss_dssp CCCCCEEETTTTEEESSSHHHH
T ss_pred CCCCCeECcccCcccCCHHHHH
Confidence 4678899999987666655543
No 56
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=41.02 E-value=4.8 Score=20.86 Aligned_cols=21 Identities=14% Similarity=0.680 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2emj_A 8 TGEKPFECAECGKSFSISSQL 28 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCEECCCCCcccCCHHHH
Confidence 567889999998776665544
No 57
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.85 E-value=4.8 Score=20.72 Aligned_cols=21 Identities=19% Similarity=0.510 Sum_probs=15.8
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (44)
T 2epv_A 8 SGEKPYECNECGKAFIWKSLL 28 (44)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCcccCchHHH
Confidence 467889999998777665554
No 58
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.79 E-value=4.6 Score=20.81 Aligned_cols=22 Identities=18% Similarity=0.492 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yts_A 8 TGEKPYICNECGKSFIQKSHLN 29 (46)
T ss_dssp CSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCEECCCCChhhCChHHHH
Confidence 4678899999987776655543
No 59
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.68 E-value=5.1 Score=20.61 Aligned_cols=21 Identities=19% Similarity=0.591 Sum_probs=15.8
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRARSSL 28 (46)
T ss_dssp CCCCCEECTTSCCEESSHHHH
T ss_pred CCCCCeeccccCChhcCHHHH
Confidence 467889999998776665544
No 60
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.68 E-value=4.7 Score=20.89 Aligned_cols=22 Identities=23% Similarity=0.480 Sum_probs=15.9
Q ss_pred ccCCceEEcccCcCCCCCCCCe
Q 033997 4 MVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~l 25 (106)
-.+.++|.|..|..-+...+.|
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2em8_A 7 GSGEKPYKCVECGKGYKRRLDL 28 (46)
T ss_dssp CCSCCSEECSSSCCEESSHHHH
T ss_pred CCCCCCeECcccCchhCCHHHH
Confidence 3567889999998766655444
No 61
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.60 E-value=16 Score=20.14 Aligned_cols=23 Identities=17% Similarity=0.358 Sum_probs=18.7
Q ss_pred cCCceEEcccCcCCCCCCCCeee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.|.++|.|..|..-+.....|..
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~ 36 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc
Confidence 46788999999988888777665
No 62
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.56 E-value=6.7 Score=20.20 Aligned_cols=22 Identities=14% Similarity=0.448 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQRVHLT 29 (46)
T ss_dssp SSCCSEECTTTCCEESSSHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 63
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.37 E-value=5.1 Score=20.69 Aligned_cols=22 Identities=23% Similarity=0.528 Sum_probs=15.9
Q ss_pred ccCCceEEcccCcCCCCCCCCe
Q 033997 4 MVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~l 25 (106)
-.+.++|.|..|..-++..+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2em7_A 7 GTGEKPYKCEECGKGFICRRDL 28 (46)
T ss_dssp SSCCCSEECSSSCCEESCHHHH
T ss_pred CCCCcCccCCCccchhCCHHHH
Confidence 3567889999998766655544
No 64
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.28 E-value=5 Score=20.67 Aligned_cols=22 Identities=18% Similarity=0.680 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytf_A 8 TGEKPFECSECQKAFNTKSNLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCcCCCCCCcccCCHHHHH
Confidence 4678899999987766655543
No 65
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.24 E-value=5.1 Score=20.48 Aligned_cols=23 Identities=13% Similarity=0.483 Sum_probs=16.6
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.|.++|.|..|..-+...+.|.
T Consensus 5 H~~~k~~~C~~C~k~f~~~~~L~ 27 (44)
T 2emx_A 5 SSGEKPFGCSCCEKAFSSKSYLL 27 (44)
T ss_dssp CSSCCCEECSSSSCEESSHHHHH
T ss_pred cCCCcCccCCCCCcccCCHHHHH
Confidence 35678899999987766655543
No 66
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=40.17 E-value=4.4 Score=21.74 Aligned_cols=22 Identities=14% Similarity=0.268 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|..-+.....|.
T Consensus 3 t~~kp~~C~~C~k~F~~~~~L~ 24 (48)
T 3iuf_A 3 DRDKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp TTTSCEECTTTCCEESSHHHHH
T ss_pred CCCcCEECCCcCcccCCHHHHH
Confidence 4678999999987776655543
No 67
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.92 E-value=5.1 Score=20.61 Aligned_cols=22 Identities=23% Similarity=0.628 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eme_A 8 SGEKPYVCDYCGKAFGLSAELV 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 5678899999987766655443
No 68
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=39.68 E-value=6.8 Score=22.76 Aligned_cols=13 Identities=15% Similarity=0.603 Sum_probs=9.3
Q ss_pred ceEEcccCcCCCC
Q 033997 8 RLYSCCNCRNHVA 20 (106)
Q Consensus 8 ~~y~C~~C~thLa 20 (106)
.-|.|..|+.+|.
T Consensus 31 ~CF~C~~C~~~L~ 43 (65)
T 2iyb_E 31 ECFLCSCCSKCLI 43 (65)
T ss_dssp TTSBCTTTCCBCT
T ss_pred CCEECCCCCCcCC
Confidence 3467888887775
No 69
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.61 E-value=5.2 Score=20.58 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQSAHL 28 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCCCCChhhCCHHHH
Confidence 567889999998776665544
No 70
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.50 E-value=5.2 Score=20.72 Aligned_cols=22 Identities=14% Similarity=0.418 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em2_A 8 SGEKPFKCKECGKAFRQNIHLA 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEECCcCCchhCCHHHHH
Confidence 5678899999987766655543
No 71
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.46 E-value=5.1 Score=20.68 Aligned_cols=21 Identities=19% Similarity=0.596 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2eml_A 8 TGEKPYECSVCGKAFSHRQSL 28 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCCCcCCccCCHHHH
Confidence 567889999998766655544
No 72
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.24 E-value=5.3 Score=20.26 Aligned_cols=22 Identities=18% Similarity=0.670 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eof_A 8 TGEKPYECNECQKAFNTKSNLM 29 (44)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCCCcccCCHhHHH
Confidence 4678899999987776655543
No 73
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=39.23 E-value=4.2 Score=18.39 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=13.4
Q ss_pred eEEcccCcCCCCCCCCee
Q 033997 9 LYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
+|.|..|...+...+.|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLK 19 (30)
T ss_dssp CCCCSSSSCCCSCSHHHH
T ss_pred CccCCCCCCccCCHHHHH
Confidence 588999988877765543
No 74
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=39.20 E-value=5.3 Score=20.54 Aligned_cols=22 Identities=27% Similarity=0.759 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFSLKSQLI 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 5678899999987776655543
No 75
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=39.18 E-value=2.9 Score=19.22 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=11.9
Q ss_pred ceEEcccCcCCCCCCCC
Q 033997 8 RLYSCCNCRNHVALHDD 24 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~ 24 (106)
++|.|..|..-++..+.
T Consensus 2 k~~~C~~C~k~f~~~~~ 18 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLAS 18 (27)
T ss_dssp CTEEETTTTEEESCHHH
T ss_pred cCcCCCCCCcccCCHHH
Confidence 57999999876655433
No 76
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=39.15 E-value=18 Score=25.02 Aligned_cols=32 Identities=25% Similarity=0.143 Sum_probs=27.2
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033997 29 SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 29 ~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
.=.|+||.|+.=-++.|+..|...++..-+|.
T Consensus 33 ~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 64 (138)
T 1iz6_A 33 SSPGKHGSAKARIEAVGIFDGKVRSIVKPTSA 64 (138)
T ss_dssp CCCCTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ecCCCCCceEEEEEEEECCCCCEEEEEecCCC
Confidence 33699999998889999999999888777764
No 77
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.02 E-value=5.4 Score=20.60 Aligned_cols=22 Identities=18% Similarity=0.611 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTDRSNLF 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 5678899999987766655543
No 78
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=38.97 E-value=12 Score=21.05 Aligned_cols=19 Identities=11% Similarity=0.310 Sum_probs=11.8
Q ss_pred cCCceEEcccCcCCCCCCC
Q 033997 5 VGPRLYSCCNCRNHVALHD 23 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~ 23 (106)
.|.++|.|..|..-++..+
T Consensus 10 ~~~k~~~C~~C~k~F~~~~ 28 (62)
T 1vd4_A 10 TNRASFKCPVCSSTFTDLE 28 (62)
T ss_dssp CSSSEEECSSSCCEEEHHH
T ss_pred CCCCCccCCCCCchhccHH
Confidence 4556777777776544433
No 79
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.96 E-value=5.6 Score=20.53 Aligned_cols=21 Identities=19% Similarity=0.577 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emp_A 8 TGVKPYMCNECGKAFSVYSSL 28 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHH
T ss_pred CCCcCeECCCCCchhCCHHHH
Confidence 567889999998776665544
No 80
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.74 E-value=6 Score=20.47 Aligned_cols=22 Identities=27% Similarity=0.659 Sum_probs=17.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enh_A 8 TGEKPYECDVCRKAFSHHASLT 29 (46)
T ss_dssp CCSSSCBCTTTCCBCSSSHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 5678899999998777766554
No 81
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.72 E-value=4.2 Score=21.19 Aligned_cols=23 Identities=17% Similarity=0.511 Sum_probs=16.8
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.+.++|.|..|..-++..+.|.
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eon_A 7 GTGEKPYKCQVCGKAFRVSSHLV 29 (46)
T ss_dssp CSSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCcccCCCCCCcccCcHHHHH
Confidence 35678899999987776655543
No 82
>3fac_A Putative uncharacterized protein; complete proteome, structural genomics, PSI-2, protein structure initiative; 2.50A {Rhodobacter sphaeroides 2}
Probab=38.69 E-value=18 Score=23.52 Aligned_cols=18 Identities=22% Similarity=0.501 Sum_probs=14.2
Q ss_pred EEeeeecccCCCceeeEE
Q 033997 62 TVADVFCSDCRVVLGWKY 79 (106)
Q Consensus 62 ~V~DI~C~~C~~~lGWkY 79 (106)
.+.--||..|++.|-|..
T Consensus 64 ~~~r~FC~~CGs~l~~~~ 81 (118)
T 3fac_A 64 TAKHWFCRTCGIYTHHQR 81 (118)
T ss_dssp CSEEEEETTTCCEEEEEC
T ss_pred CEeeEECCCCCccccCcc
Confidence 345679999999998754
No 83
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.67 E-value=5.7 Score=20.41 Aligned_cols=21 Identities=24% Similarity=0.638 Sum_probs=15.5
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQKANL 28 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 467889999998766655444
No 84
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=38.60 E-value=12 Score=26.26 Aligned_cols=29 Identities=21% Similarity=0.464 Sum_probs=25.4
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCCc
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRNG 35 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G 35 (106)
++.|.|..|+++=+...-|+.-.|....+
T Consensus 93 p~RYfCtQCHVpQada~PlV~N~F~~~~~ 121 (130)
T 1ogy_B 93 PRRYFCTACHVPQTNAQPLVTNEFRDMLT 121 (130)
T ss_dssp STTCCGGGTCCBCBCCCCSSCBCCBCSSS
T ss_pred ccceecccccCccccCccccccccccchh
Confidence 57899999999999999999999986654
No 85
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.57 E-value=5.4 Score=20.59 Aligned_cols=21 Identities=14% Similarity=0.464 Sum_probs=15.6
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2enc_A 8 SGEKPFKCEECGKGFYTNSQC 28 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCCCcCCCCCCCcCCChHHH
Confidence 567889999998766665544
No 86
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.47 E-value=5.4 Score=20.66 Aligned_cols=22 Identities=14% Similarity=0.362 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CCSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCCccCCHHHHH
Confidence 5678899999987776655543
No 87
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.37 E-value=5.4 Score=20.57 Aligned_cols=22 Identities=18% Similarity=0.468 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ene_A 8 TGEKPYKCNECGKVFRHNSYLS 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCChHHHH
Confidence 5678899999987766655443
No 88
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.32 E-value=5.5 Score=20.63 Aligned_cols=22 Identities=27% Similarity=0.673 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em4_A 8 TGQRPYECIECGKAFKTKSSLI 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 5678899999987776655543
No 89
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.27 E-value=4.4 Score=20.96 Aligned_cols=22 Identities=18% Similarity=0.555 Sum_probs=16.6
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emg_A 8 TGENPFICSECGKVFTHKTNLI 29 (46)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 5678899999988777665553
No 90
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.12 E-value=4.6 Score=20.88 Aligned_cols=22 Identities=18% Similarity=0.613 Sum_probs=16.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enf_A 8 TGEKPYKCNECGKVFTQNSHLV 29 (46)
T ss_dssp CCCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 5678899999988777665553
No 91
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.04 E-value=5.9 Score=20.51 Aligned_cols=21 Identities=29% Similarity=0.684 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (46)
T 2ytp_A 8 TGERHYECSECGKAFARKSTL 28 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCcCCcccCCHHHH
Confidence 567889999998776665544
No 92
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.99 E-value=5.6 Score=20.53 Aligned_cols=22 Identities=18% Similarity=0.502 Sum_probs=16.1
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQKAHLA 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 93
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.99 E-value=5.7 Score=20.48 Aligned_cols=21 Identities=10% Similarity=0.143 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+...+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2yso_A 8 SREKSHQCRECGEIFFQYVSL 28 (46)
T ss_dssp SCCCCEECTTTCCEESSHHHH
T ss_pred CCCCCEEccccChhhCCHHHH
Confidence 567889999998776665544
No 94
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.90 E-value=5.8 Score=20.46 Aligned_cols=21 Identities=24% Similarity=0.643 Sum_probs=15.6
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L 28 (46)
T 2emi_A 8 TGERHYECSECGKAFIQKSTL 28 (46)
T ss_dssp SSCCCEECSSSCCEESSHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHH
Confidence 567889999998776665544
No 95
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=37.82 E-value=3.9 Score=18.74 Aligned_cols=17 Identities=24% Similarity=0.532 Sum_probs=12.2
Q ss_pred eEEcccCcCCCCCCCCe
Q 033997 9 LYSCCNCRNHVALHDDV 25 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~l 25 (106)
+|.|..|...+...+.|
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLL 18 (30)
T ss_dssp CSBCTTTCCBCSSSHHH
T ss_pred CcCCcccCcccCChHHH
Confidence 58899998777665544
No 96
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.75 E-value=5.8 Score=20.52 Aligned_cols=22 Identities=14% Similarity=0.502 Sum_probs=16.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emf_A 8 TGGKHFECTECGKAFTRKSTLS 29 (46)
T ss_dssp SSSCCEECSSSCCEESCHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4678899999987766655543
No 97
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=37.69 E-value=5.7 Score=20.48 Aligned_cols=21 Identities=19% Similarity=0.600 Sum_probs=15.3
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ema_A 8 TGEKRYKCNECGKVFSRNSQL 28 (46)
T ss_dssp TTSCCEECSSSCCEESSHHHH
T ss_pred CCCcCcCCCCCcchhCCHHHH
Confidence 567889999998766655444
No 98
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.64 E-value=5.7 Score=20.50 Aligned_cols=22 Identities=18% Similarity=0.525 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTKKSQLH 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCCHHHHH
Confidence 5678899999987766655543
No 99
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=37.63 E-value=5.8 Score=20.38 Aligned_cols=22 Identities=18% Similarity=0.543 Sum_probs=15.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em9_A 8 TGEKPYNCKECGKSFRWASCLL 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCccccccCChHHHH
Confidence 5678899999987666555443
No 100
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.62 E-value=5.9 Score=20.41 Aligned_cols=22 Identities=18% Similarity=0.534 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFRRNSHLA 29 (46)
T ss_dssp TCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 5678899999987666655443
No 101
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.52 E-value=5.6 Score=20.52 Aligned_cols=21 Identities=19% Similarity=0.706 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTIRSNL 28 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCChhhCCHHHH
Confidence 567889999998776665554
No 102
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.07 E-value=11 Score=22.04 Aligned_cols=11 Identities=27% Similarity=1.044 Sum_probs=6.9
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1x61_A 34 FVCSTCRAQLR 44 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CcccccCCcCC
Confidence 56666666663
No 103
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=37.05 E-value=4.2 Score=18.29 Aligned_cols=18 Identities=11% Similarity=0.423 Sum_probs=12.2
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|..-+.....|
T Consensus 1 ~~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CCEECTTTSCEESCHHHH
T ss_pred CCccCCCCCCccCChhHH
Confidence 368999998766554443
No 104
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.03 E-value=4.8 Score=20.88 Aligned_cols=22 Identities=14% Similarity=0.499 Sum_probs=16.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yth_A 8 SGEKPFQCEECGKRFTQNSHLH 29 (46)
T ss_dssp CCSSSBCCSSSCCCBSSHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHH
Confidence 4678899999988777666554
No 105
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=36.98 E-value=6 Score=20.45 Aligned_cols=22 Identities=18% Similarity=0.505 Sum_probs=16.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-+.....|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFSGKLRLL 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 5678899999987766655443
No 106
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.78 E-value=4.8 Score=20.35 Aligned_cols=22 Identities=18% Similarity=0.380 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQTLK 28 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCccCCHHHHH
Confidence 4678899999988776655543
No 107
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=36.76 E-value=21 Score=24.50 Aligned_cols=30 Identities=20% Similarity=0.112 Sum_probs=25.7
Q ss_pred cCCCceEEEeecccccccCCccceeeceec
Q 033997 31 QGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 31 ~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
.|+||.|+.=-++.|+..|...++...+|.
T Consensus 39 pGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 68 (136)
T 2eif_A 39 PGKHGGAKARVVGIGIFEKVKKEFVAPTSS 68 (136)
T ss_dssp CCSSSCCEEEEEEEESSSCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEEcCCCCeEEEEecCCC
Confidence 599999998889999999998887776664
No 108
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.73 E-value=4.7 Score=20.25 Aligned_cols=22 Identities=23% Similarity=0.560 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQKGSLI 28 (42)
T ss_dssp CSCCSBCCTTTTCCBSSHHHHH
T ss_pred CCCCCeeCCCccchhCCHHHHH
Confidence 4678899999988777655543
No 109
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.71 E-value=6.2 Score=20.40 Aligned_cols=22 Identities=18% Similarity=0.576 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTRKSGLH 29 (46)
T ss_dssp CSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEECcccCCccCCHhHHH
Confidence 4678899999988776665544
No 110
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.64 E-value=5.8 Score=20.44 Aligned_cols=21 Identities=19% Similarity=0.577 Sum_probs=15.7
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFTQNSHL 28 (46)
T ss_dssp SSSCSEECSSSCCEESSHHHH
T ss_pred CCCCCEeCCcCCCccCCHHHH
Confidence 467889999998777665554
No 111
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.54 E-value=5 Score=20.66 Aligned_cols=22 Identities=18% Similarity=0.567 Sum_probs=16.7
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eop_A 8 TGEKPHECRECGKSFSFNSQLI 29 (46)
T ss_dssp CCCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeeCCCCCchhCCHHHHH
Confidence 5678899999988777665554
No 112
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=36.50 E-value=3.7 Score=22.09 Aligned_cols=21 Identities=14% Similarity=0.263 Sum_probs=12.7
Q ss_pred CCceEEcccCcCCCCCCCCee
Q 033997 6 GPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.++|.|..|..-+.....|.
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~ 21 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLN 21 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHH
T ss_pred CCCCccCCCCcchhCChHHHH
Confidence 457889999987777665554
No 113
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.37 E-value=5 Score=20.88 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=17.3
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.+.++|.|..|..-+...+.|.
T Consensus 7 h~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eom_A 7 GHGERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCCCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCCcCCCCCCCeeCChHHHH
Confidence 35678899999998877765554
No 114
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.18 E-value=6.3 Score=20.30 Aligned_cols=22 Identities=27% Similarity=0.600 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emh_A 8 TGERPYICTVCGKAFTDRSNLI 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 5678899999987776655543
No 115
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.13 E-value=5.3 Score=20.53 Aligned_cols=22 Identities=23% Similarity=0.623 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAPCLL 29 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHHHHH
T ss_pred CCCCCeECCCCCCccCchHHHH
Confidence 5678899999988777665543
No 116
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.07 E-value=4.9 Score=20.84 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=16.8
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoh_A 8 SGKKPYECKECRKTFIQIGHLN 29 (46)
T ss_dssp CCSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4668899999998777765554
No 117
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.90 E-value=6.4 Score=20.19 Aligned_cols=22 Identities=14% Similarity=0.375 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en8_A 8 SGEKSHTCDECGKNFCYISALR 29 (46)
T ss_dssp CCCSSEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCcCcccCCHHHHH
Confidence 5678899999987666655443
No 118
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.57 E-value=5.3 Score=20.61 Aligned_cols=22 Identities=18% Similarity=0.552 Sum_probs=16.6
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytn_A 8 TGKKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCSSCBCTTTCCBCSSHHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHHH
Confidence 5678899999988777665553
No 119
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.56 E-value=5.5 Score=20.60 Aligned_cols=22 Identities=18% Similarity=0.528 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em6_A 8 MGEKCYKCDVCGKEFSQSSHLQ 29 (46)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999988777655543
No 120
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.55 E-value=5.3 Score=20.57 Aligned_cols=22 Identities=23% Similarity=0.628 Sum_probs=16.6
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (47)
T 2epx_A 8 TGKKPYECIECGKAFIQNTSLI 29 (47)
T ss_dssp CCCCSBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCccCchhCChHHHH
Confidence 5678899999988777665554
No 121
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.53 E-value=6.5 Score=20.26 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=16.0
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emy_A 8 TGENPYECHECGKAFSRKYQLI 29 (46)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCcHHHHH
Confidence 4668899999987766655543
No 122
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.13 E-value=5.3 Score=20.68 Aligned_cols=22 Identities=18% Similarity=0.477 Sum_probs=16.5
Q ss_pred ccCCceEEcccCcCCCCCCCCe
Q 033997 4 MVGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~l 25 (106)
-.+.++|.|..|..-+...+.|
T Consensus 7 H~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2emz_A 7 GSGERPFKCNECGKGFGRRSHL 28 (46)
T ss_dssp SSCCCSCCCSSSCCCCSSHHHH
T ss_pred CCCCCCeECCCCCcccCCHHHH
Confidence 3567889999998877766554
No 123
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.11 E-value=5.6 Score=20.51 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=15.2
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYNSKFNL 28 (46)
T ss_dssp SSCCSEEETTTTEEESCHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 567889999998766655444
No 124
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.03 E-value=5.5 Score=20.54 Aligned_cols=21 Identities=14% Similarity=0.564 Sum_probs=15.1
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en1_A 8 SGEKPFKCEECGKRFTQNSQL 28 (46)
T ss_dssp CCCCSEEETTTTEEESSHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHH
Confidence 567889999997666555444
No 125
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=34.94 E-value=5.4 Score=20.65 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=16.6
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQTTHLI 29 (46)
T ss_dssp SSSCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 5678899999988777665553
No 126
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.80 E-value=4.7 Score=20.74 Aligned_cols=22 Identities=14% Similarity=0.366 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (43)
T 2yrm_A 6 SGNGAFFCNECDCRFSEEASLK 27 (43)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCeeCChHHHH
Confidence 4567899999988877665553
No 127
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.72 E-value=5.6 Score=20.58 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2elz_A 8 SVEKPYKCEDCGKGYNRRLNLD 29 (46)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeeCcccCchhCCHHHHH
Confidence 5678899999988777655543
No 128
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.66 E-value=5.5 Score=20.63 Aligned_cols=22 Identities=18% Similarity=0.673 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en9_A 8 AGKKLFKCNECKKTFTQSSSLT 29 (46)
T ss_dssp CSSCCCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 5678899999988777655543
No 129
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.22 E-value=4.6 Score=20.51 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRSKSYLI 29 (44)
T ss_dssp SSSSSSCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHH
Confidence 4668899999988777665543
No 130
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.02 E-value=4.9 Score=20.47 Aligned_cols=21 Identities=29% Similarity=0.830 Sum_probs=15.6
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (44)
T 2eoj_A 8 TGENPYECCECGKVFSRKDQL 28 (44)
T ss_dssp SSCCSCEETTTTEECSSHHHH
T ss_pred CCCcCeeCCCCCCccCCHHHH
Confidence 467889999998766665544
No 131
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.86 E-value=5.9 Score=20.49 Aligned_cols=22 Identities=23% Similarity=0.622 Sum_probs=16.4
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSSKSYLI 29 (46)
T ss_dssp SCCCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCCcCCCccChhhCChHHHH
Confidence 5678899999988777665543
No 132
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=33.82 E-value=8.9 Score=22.69 Aligned_cols=11 Identities=27% Similarity=0.869 Sum_probs=5.7
Q ss_pred EcccCcCCCCC
Q 033997 11 SCCNCRNHVAL 21 (106)
Q Consensus 11 ~C~~C~thLa~ 21 (106)
.|..|+.++..
T Consensus 17 ~C~~C~~~I~~ 27 (77)
T 2egq_A 17 KCAGCKNPITG 27 (77)
T ss_dssp CCSSSCCCCCC
T ss_pred cCcccCCcccC
Confidence 35555555553
No 133
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.44 E-value=6 Score=20.40 Aligned_cols=22 Identities=18% Similarity=0.511 Sum_probs=16.1
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2epz_A 8 TGEKPFDCIDCGKAFSDHIGLN 29 (46)
T ss_dssp CCCCSBCCTTTCCCBSSHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHH
Confidence 5678899999987776655543
No 134
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=33.32 E-value=6.3 Score=21.33 Aligned_cols=21 Identities=10% Similarity=0.229 Sum_probs=15.3
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+...+.|
T Consensus 20 ~~~k~~~C~~C~k~f~~~~~L 40 (54)
T 1yui_A 20 QSEQPATCPICYAVIRQSRNL 40 (54)
T ss_dssp TSSCCEECTTTCCEESSHHHH
T ss_pred CCCCCccCCCCCcccCCHHHH
Confidence 456789999998776655444
No 135
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=33.31 E-value=22 Score=24.49 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=23.1
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033997 29 SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 29 ~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
.=.|++|.|+.--++.|+..|...++..-+|.
T Consensus 33 ~KpGKgG~A~vr~k~knl~TG~~~e~tf~s~~ 64 (138)
T 3cpf_A 33 SKTGKHGHAKVHLVGIDIFTGKKYEDICPSTH 64 (138)
T ss_dssp ECC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred ccCCCCccEEEEEEEEECCCCCEEEEEeCCCC
Confidence 33699999999999999999999888776664
No 136
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.30 E-value=6 Score=20.41 Aligned_cols=21 Identities=19% Similarity=0.540 Sum_probs=15.4
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2en6_A 8 SGEKPYGCNECGKTFSQKSIL 28 (46)
T ss_dssp CSSCCEEETTTTEEESSHHHH
T ss_pred CCCcCeECCCCCcccCchHHH
Confidence 567889999998766655544
No 137
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.21 E-value=5.1 Score=20.61 Aligned_cols=22 Identities=18% Similarity=0.579 Sum_probs=16.7
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFIKKSQLH 29 (46)
T ss_dssp SSCCSSCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4678899999988777665554
No 138
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=33.19 E-value=26 Score=23.91 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=26.8
Q ss_pred ecCCCceEEEeecccccccCCccceeeceec
Q 033997 30 FQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 30 f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
=.|++|.|+.=-++.|+..|...++..-+|.
T Consensus 36 KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~ 66 (136)
T 1bkb_A 36 KTGKHGSAKARIVAVGVFDGGKRTLSLPVDA 66 (136)
T ss_dssp CCSTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCCceEEEEEEEECCCCCeEEEEEcCCC
Confidence 3699999999999999999999888777765
No 139
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=33.12 E-value=6.2 Score=20.33 Aligned_cols=22 Identities=14% Similarity=0.462 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQASSLR 29 (46)
T ss_dssp CCCCCCCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 5678899999988777655543
No 140
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.94 E-value=6.2 Score=20.39 Aligned_cols=22 Identities=27% Similarity=0.570 Sum_probs=16.1
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVLSAHLN 29 (46)
T ss_dssp SSCCSEEETTTTEEESSHHHHH
T ss_pred CCCCCeECcccChhhCCHHHHH
Confidence 4668899999987766655543
No 141
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.65 E-value=13 Score=22.03 Aligned_cols=11 Identities=18% Similarity=0.821 Sum_probs=5.2
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (76)
T 1x68_A 36 FNCGKCSVSLV 46 (76)
T ss_dssp CBCTTTCCBCS
T ss_pred CChhhCCCcCC
Confidence 44445544443
No 142
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.23 E-value=15 Score=20.44 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=9.0
Q ss_pred CCceEEcc-cCcCCCCCCC
Q 033997 6 GPRLYSCC-NCRNHVALHD 23 (106)
Q Consensus 6 g~~~y~C~-~C~thLa~~~ 23 (106)
|.++|.|. .|..-+...+
T Consensus 33 ~~~p~~C~~~C~k~f~~~~ 51 (66)
T 2eod_A 33 PRLPVACPNQCGVGTVARE 51 (66)
T ss_dssp SSSEEECTTCCSCCEEETT
T ss_pred CCcCccCCcccCcccccHH
Confidence 44556665 5655444333
No 143
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.05 E-value=8.1 Score=19.85 Aligned_cols=21 Identities=24% Similarity=0.662 Sum_probs=15.2
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-++..+.|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHRHTHL 28 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCChHHH
Confidence 466789999998766655444
No 144
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.02 E-value=5.6 Score=20.47 Aligned_cols=21 Identities=14% Similarity=0.610 Sum_probs=15.0
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L 28 (45)
T 2epu_A 8 TGQKPFECTHCGKSFRAKGNL 28 (45)
T ss_dssp CSCCSEEETTTTEEESSHHHH
T ss_pred CCCcCccCCCCCCccCChHHH
Confidence 456789999998766655444
No 145
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.96 E-value=7.9 Score=19.88 Aligned_cols=21 Identities=19% Similarity=0.542 Sum_probs=15.1
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+...+.|
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L 28 (46)
T 2ep0_A 8 TGEKPYKCDVCHKSFRYGSSL 28 (46)
T ss_dssp TTCCSEECSSSCCEESSHHHH
T ss_pred CCCCCeeCcccCcccCChHHH
Confidence 466889999998766655444
No 146
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.88 E-value=12 Score=21.71 Aligned_cols=11 Identities=27% Similarity=1.087 Sum_probs=6.6
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (70)
T 2d8z_A 32 FVCTACRKQLS 42 (70)
T ss_dssp SBCSSSCCBCT
T ss_pred CccCCCCCcCC
Confidence 55666666664
No 147
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.70 E-value=5.1 Score=20.61 Aligned_cols=22 Identities=18% Similarity=0.625 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSVRSSLT 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4678899999987766655443
No 148
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=31.68 E-value=3 Score=28.95 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=21.9
Q ss_pred ccccCCceEEcccCcCCCCCCCCeee
Q 033997 2 AEMVGPRLYSCCNCRNHVALHDDVIS 27 (106)
Q Consensus 2 ~~l~g~~~y~C~~C~thLa~~~~liS 27 (106)
+++.|.+.|.|..|...+++.+.|.+
T Consensus 43 ed~tGekpfyC~~C~K~F~~~~~L~~ 68 (124)
T 1zr9_A 43 PDLPGGGLHRCLACARYFIDSTNLKT 68 (124)
T ss_dssp SSSGGGGCSEETTTTEECSSHHHHHH
T ss_pred ccCCCCcceEcccCcchhCCHHHHHH
Confidence 45678899999999999999888754
No 149
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=31.45 E-value=4.5 Score=18.25 Aligned_cols=18 Identities=22% Similarity=0.560 Sum_probs=12.2
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|..-++..+.|
T Consensus 1 k~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCCBCTTTCCBCSSHHHH
T ss_pred CCeECCCCCcccCCHHHH
Confidence 358898898776655443
No 150
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.33 E-value=13 Score=22.27 Aligned_cols=17 Identities=12% Similarity=0.522 Sum_probs=10.4
Q ss_pred EcccCcCCCCCCCCeee
Q 033997 11 SCCNCRNHVALHDDVIS 27 (106)
Q Consensus 11 ~C~~C~thLa~~~~liS 27 (106)
.|..|+.++...+.+|+
T Consensus 17 ~C~~C~~~I~~~~~~~~ 33 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELF 33 (82)
T ss_dssp BCTTTCCBCCSSCCBCC
T ss_pred cCccCCCccccCcEEEE
Confidence 57777777764444443
No 151
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.29 E-value=7.8 Score=20.65 Aligned_cols=21 Identities=14% Similarity=0.230 Sum_probs=15.8
Q ss_pred cCCceEEccc--CcCCCCCCCCe
Q 033997 5 VGPRLYSCCN--CRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~--C~thLa~~~~l 25 (106)
.|.++|.|.. |..-++..+.|
T Consensus 5 ~gekp~~C~~~~C~k~F~~~~~L 27 (38)
T 2eln_A 5 SSGILLKCPTDGCDYSTPDKYKL 27 (38)
T ss_dssp SCCCCEECSSSSCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 4678999986 98877765544
No 152
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=31.25 E-value=20 Score=21.35 Aligned_cols=12 Identities=25% Similarity=0.805 Sum_probs=6.3
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|..
T Consensus 35 F~C~~C~~~L~~ 46 (81)
T 1a7i_A 35 FLCMVCRKNLDS 46 (81)
T ss_dssp EECSSSCCEECS
T ss_pred CccCCCCCCCCC
Confidence 555555555543
No 153
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.14 E-value=18 Score=20.91 Aligned_cols=12 Identities=17% Similarity=0.742 Sum_probs=6.4
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|..
T Consensus 34 F~C~~C~~~L~~ 45 (72)
T 1wyh_A 34 FLCSGCEQPLGS 45 (72)
T ss_dssp CBCTTTCCBTTT
T ss_pred CeECCCCCcCCC
Confidence 555555555543
No 154
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.95 E-value=6.9 Score=20.07 Aligned_cols=22 Identities=18% Similarity=0.599 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTWKSRLR 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCccCCccChhhCCHHHHH
Confidence 4667899999988777655543
No 155
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=30.89 E-value=34 Score=24.53 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=27.0
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033997 29 SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 29 ~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
.=.|++|.|+.=-++.|+..|...++..-+|-
T Consensus 57 ~KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~ 88 (167)
T 3er0_A 57 SKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTH 88 (167)
T ss_dssp ECCSSSSCCEEEEEEEESSSCCCEEEEEESSS
T ss_pred eCCCCcCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 33699999999999999999999888876664
No 156
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.79 E-value=5.3 Score=20.54 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoe_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCcChhhCCHHHHH
Confidence 4677899999987766655543
No 157
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.61 E-value=7 Score=20.12 Aligned_cols=22 Identities=23% Similarity=0.662 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRAHSNLT 29 (46)
T ss_dssp CCSCCCCCTTTTCCCSSHHHHH
T ss_pred CCCCCeECCcCChhhCCHHHHH
Confidence 4668899999988776655543
No 158
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.50 E-value=5.4 Score=20.58 Aligned_cols=22 Identities=18% Similarity=0.543 Sum_probs=16.6
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSSCSSSCCSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4678899999988777665554
No 159
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.37 E-value=5.3 Score=20.62 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=16.5
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2yti_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCChhHHH
Confidence 4667899999988777665553
No 160
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=30.32 E-value=6.5 Score=21.78 Aligned_cols=22 Identities=18% Similarity=0.369 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|...+.....|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~ 27 (66)
T 2drp_A 6 EGEHTYRCKVCSRVYTHISNFC 27 (66)
T ss_dssp EETTEEECTTTCCEESSHHHHH
T ss_pred CCCcceECCCCcchhCCHHHHH
Confidence 4678899999987766655443
No 161
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.16 E-value=14 Score=21.47 Aligned_cols=11 Identities=18% Similarity=0.772 Sum_probs=6.7
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (72)
T 1x4l_A 36 FNCKKCSLSLV 46 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CEeccCCCcCC
Confidence 56666666664
No 162
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.79 E-value=13 Score=21.47 Aligned_cols=11 Identities=27% Similarity=0.999 Sum_probs=5.6
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (69)
T 2cur_A 32 FVCVTCSKKLA 42 (69)
T ss_dssp TBCTTTCCBCT
T ss_pred CEECCCCCCCC
Confidence 44555555554
No 163
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.72 E-value=5 Score=20.68 Aligned_cols=21 Identities=29% Similarity=0.539 Sum_probs=15.4
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+...+.|
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l 26 (45)
T 2epq_A 6 SGEKPYSCPVCGLRFKRKDRM 26 (45)
T ss_dssp SSCCSSEETTTTEECSCHHHH
T ss_pred CCCCCCcCCCCCcccCCHHHH
Confidence 456789999998776665544
No 164
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=29.09 E-value=12 Score=32.73 Aligned_cols=67 Identities=21% Similarity=0.366 Sum_probs=0.0
Q ss_pred eEEcccCcCCCCCCCCee--eeeecCCCceEEEeecccccccCCccceeeceecEEEeeeecc--cCCCceeeEE
Q 033997 9 LYSCCNCRNHVALHDDVI--SKSFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGLHTVADVFCS--DCRVVLGWKY 79 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li--Sk~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~h~V~DI~C~--~C~~~lGWkY 79 (106)
.+.|++|...++..+||- .++-+=.-+++|- ..+++..-+. .+. .-..+....|+|. .|+..+|-..
T Consensus 812 ~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~f~--~~~~~~~~~~-~~~-~~~~~~~~~~~c~~~~c~~~~g~~~ 882 (936)
T 4a2w_A 812 NLLCGKCKAYACSTDDIRIIKDSHHIVLGEAFK--ERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITV 882 (936)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred EEEcCCCCceeechhhheeecCCCeEecChhhh--hheeccCCCC-cch-hhcccCCceEEeCccccChHhhhhe
Confidence 488999999999999973 2222222233332 2223322222 222 3445667889999 9999988755
No 165
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.02 E-value=7.3 Score=19.90 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eou_A 8 AAKTTSECQECGKIFRHSSLLI 29 (44)
T ss_dssp SSSCCCCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4567899999988777655543
No 166
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.01 E-value=7.3 Score=20.03 Aligned_cols=22 Identities=14% Similarity=0.369 Sum_probs=16.2
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCGRSRLN 29 (46)
T ss_dssp SSSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCcCCchhCCHHHHH
Confidence 4667899999987777655543
No 167
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=28.71 E-value=8.5 Score=22.41 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=12.8
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|+.-+...+.|
T Consensus 28 t~ekp~~C~~C~k~F~~~~~L 48 (60)
T 4gzn_C 28 LGYRPRSCPECGKCFRDQSEV 48 (60)
T ss_dssp HTCCCEECTTTCCEESSHHHH
T ss_pred CCCcCeECCCCCCCcCCHHHH
Confidence 356677777777655554443
No 168
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.66 E-value=6.3 Score=20.45 Aligned_cols=22 Identities=18% Similarity=0.525 Sum_probs=16.3
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytm_A 8 TGEKPYKCMECGKAFGDNSSCT 29 (46)
T ss_dssp SSCCSSSBTTTTBCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 4667899999988777665543
No 169
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=28.44 E-value=11 Score=21.66 Aligned_cols=22 Identities=18% Similarity=0.495 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+.....|.
T Consensus 11 ~~~k~~~C~~C~k~f~~~~~L~ 32 (77)
T 2ct1_A 11 SGEKPYECYICHARFTQSGTMK 32 (77)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCcCchhCCHHHHH
Confidence 4667899999987766655543
No 170
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.29 E-value=6.3 Score=20.39 Aligned_cols=23 Identities=17% Similarity=0.398 Sum_probs=17.0
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.+.++|.|..|..-+...+.|.
T Consensus 7 h~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytt_A 7 GEGEKPYQCSECGKSFSGSYRLT 29 (46)
T ss_dssp CSCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCCCCeeCCCCCcccCCHHHHH
Confidence 35677899999988777665553
No 171
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.28 E-value=6 Score=20.31 Aligned_cols=22 Identities=18% Similarity=0.558 Sum_probs=15.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.++|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytr_A 8 TGEKPYKCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSCCTTCCTTTCCCCSSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4667899999987776655443
No 172
>3izc_U 60S ribosomal protein RPL21 (L21E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_U 3o58_T 3o5h_T 3u5e_T 3u5i_T 4b6a_T
Probab=27.25 E-value=31 Score=24.91 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=24.3
Q ss_pred eeeecCCCceEEEee-----cccccccCCc--cceeeceecEE
Q 033997 27 SKSFQGRNGRAFLFS-----HAMNIVVGPK--EDRQLMTGLHT 62 (106)
Q Consensus 27 Sk~f~G~~G~AyLf~-----~v~Nv~~g~~--~~r~m~TG~h~ 62 (106)
-+.|+|++|+.|=.. =++|...|.. .-|.-+.-.|+
T Consensus 54 Hk~YHGkTGrV~nvtq~AvgiiVnk~v~gkil~KrI~VriEHi 96 (160)
T 3izc_U 54 HKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHI 96 (160)
T ss_dssp CGGGTTCEEEEEEECSSSEEEEECCCSSSSCCCEEEEECTTSE
T ss_pred CcccCCCCeEEEeeCCcEEEEEEEEEECCEeeeeEEEEeHHHc
Confidence 368999999999765 3677777766 44544444443
No 173
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=26.88 E-value=10 Score=20.22 Aligned_cols=21 Identities=19% Similarity=0.469 Sum_probs=14.4
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|...++..+.|
T Consensus 25 ~~~~~~~C~~C~~~f~~~~~l 45 (57)
T 1bbo_A 25 TDVRPYHCTYCNFSFKTKGNL 45 (57)
T ss_dssp SSCCCEECSSSSCEESSHHHH
T ss_pred CCCCCccCCCCCchhcCHHHH
Confidence 355789999998766655443
No 174
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.60 E-value=9.8 Score=20.56 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=15.1
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+.....|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLN 29 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 3567899999987666554443
No 175
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.59 E-value=10 Score=21.71 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=14.4
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|.++|.|..|..-+.....|
T Consensus 3 ~~~k~~~C~~C~k~f~~~~~L 23 (78)
T 2d9h_A 3 SGSSGLQCEICGFTCRQKASL 23 (78)
T ss_dssp CSCCCEECSSSCCEESSHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHH
Confidence 356789999997766555444
No 176
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=26.21 E-value=30 Score=17.92 Aligned_cols=22 Identities=9% Similarity=0.401 Sum_probs=16.5
Q ss_pred cCCceEEcc--cCcCCCCCCCCee
Q 033997 5 VGPRLYSCC--NCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~--~C~thLa~~~~li 26 (106)
.|.++|.|. .|..-++..+.|.
T Consensus 14 ~~~k~~~C~~~~C~k~F~~~~~L~ 37 (47)
T 1ncs_A 14 MPDKTFECLFPGCTKTFKRRYNIR 37 (47)
T ss_dssp ETTTEEECCCTTCCCEECSSSSHH
T ss_pred CCCCCeECCCCCCCCccCCHHHHH
Confidence 467899995 7988777776654
No 177
>1jni_A NAPB;, diheme cytochrome C NAPB; dihaem cytochrome C, proteolytic fragment, nitrate reductase subunit, oxidoreductase; HET: HEM; 1.25A {Haemophilus influenzae} SCOP: a.138.1.3
Probab=25.95 E-value=16 Score=25.34 Aligned_cols=28 Identities=29% Similarity=0.587 Sum_probs=10.8
Q ss_pred CceEEcccCcCCCCCCCCeeeeeecCCC
Q 033997 7 PRLYSCCNCRNHVALHDDVISKSFQGRN 34 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~ 34 (106)
++.|.|..|+++=+...-|+.-.|....
T Consensus 92 p~Ry~CtqCHVPQ~~~~PlV~N~F~~~~ 119 (123)
T 1jni_A 92 PRRYFCLQCHVSQANVDPIVPNDFKPMK 119 (123)
T ss_dssp CCSCCGGGTCCC----------------
T ss_pred ccceecccccCCcccccccccCccccch
Confidence 4779999999999999999998887654
No 178
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=25.82 E-value=6.6 Score=19.02 Aligned_cols=18 Identities=17% Similarity=0.510 Sum_probs=12.5
Q ss_pred ceEEcccCcCCCCCCCCe
Q 033997 8 RLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
++|.|..|..-++..+.|
T Consensus 1 kp~~C~~C~k~F~~~~~L 18 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHL 18 (33)
T ss_dssp CCCCCSSSCCCCSSHHHH
T ss_pred CcccCCCCCchhCCHHHH
Confidence 368899998777665444
No 179
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=25.50 E-value=42 Score=24.12 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=26.6
Q ss_pred ecCCCceEEEeecccccccCCccceeeceec
Q 033997 30 FQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 30 f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
=.|++|.|+.=-.+.|+..|...++..-+|-
T Consensus 56 KpGKhG~A~vr~k~knl~TGk~~E~tf~s~~ 86 (167)
T 3hks_A 56 KTGKHGHAKCHFVAIDIFTAKKLEDIVPSSH 86 (167)
T ss_dssp CSSTTCCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 3699999999999999999999887777664
No 180
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.39 E-value=17 Score=21.27 Aligned_cols=16 Identities=19% Similarity=0.673 Sum_probs=8.1
Q ss_pred EcccCcCCCCCCCCee
Q 033997 11 SCCNCRNHVALHDDVI 26 (106)
Q Consensus 11 ~C~~C~thLa~~~~li 26 (106)
.|..|+.++...+.++
T Consensus 13 ~C~~C~~~I~~~~~~~ 28 (77)
T 1g47_A 13 TCERCKGGFAPAEKIV 28 (77)
T ss_dssp BCSSSCCBCCSTTTCE
T ss_pred CchhcCCccCCCceEE
Confidence 4555555555444433
No 181
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=24.66 E-value=27 Score=20.51 Aligned_cols=25 Identities=12% Similarity=0.421 Sum_probs=16.2
Q ss_pred eEEcccCcCCCCCCCCeeeeeecCCCceEEE
Q 033997 9 LYSCCNCRNHVALHDDVISKSFQGRNGRAFL 39 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~liSk~f~G~~G~AyL 39 (106)
-|.|..|+.+|.... |..+.|+.|-
T Consensus 27 CF~C~~C~~~L~~~~------~~~~~g~~yC 51 (76)
T 1iml_A 27 CLKCEKCGKTLTSGG------HAEHEGKPYC 51 (76)
T ss_dssp TCBCTTTCCBCCTTT------EEEETTEEEE
T ss_pred CCCccccCccCCCCc------eECcCCeEee
Confidence 378888988887652 3334566554
No 182
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=24.64 E-value=26 Score=20.71 Aligned_cols=17 Identities=18% Similarity=0.462 Sum_probs=12.0
Q ss_pred ceEEcccCcCCCCCCCC
Q 033997 8 RLYSCCNCRNHVALHDD 24 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~ 24 (106)
.+|.|..|.+.+++.+.
T Consensus 2 ~iY~C~rCg~~fs~~el 18 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQL 18 (48)
T ss_dssp ---CCCCTTTTCCCCCS
T ss_pred cEEEeeccCCCccHHHH
Confidence 47999999999887765
No 183
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.40 E-value=19 Score=21.26 Aligned_cols=11 Identities=18% Similarity=0.700 Sum_probs=5.8
Q ss_pred EEcccCcCCCC
Q 033997 10 YSCCNCRNHVA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 37 F~C~~C~~~L~ 47 (76)
T 2cu8_A 37 LKCERCSKTLT 47 (76)
T ss_dssp CBCSSSCCBCC
T ss_pred CCCCCCCCccC
Confidence 45555555554
No 184
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.06 E-value=29 Score=20.46 Aligned_cols=12 Identities=17% Similarity=0.675 Sum_probs=6.2
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|..
T Consensus 42 F~C~~C~~~L~~ 53 (80)
T 1x3h_A 42 FVCGDCFTSFST 53 (80)
T ss_dssp CBCSSSCCBSCS
T ss_pred CChhhCCCCCCC
Confidence 455555555543
No 185
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=23.90 E-value=18 Score=27.20 Aligned_cols=18 Identities=33% Similarity=0.660 Sum_probs=16.0
Q ss_pred eecEEEeeeecccCCCceee
Q 033997 58 TGLHTVADVFCSDCRVVLGW 77 (106)
Q Consensus 58 TG~h~V~DI~C~~C~~~lGW 77 (106)
||. ||.+-|..|+..||.
T Consensus 163 TG~--VRGlLC~~CN~~LG~ 180 (200)
T 3gox_A 163 TGW--GREWICDSCNTGLGR 180 (200)
T ss_dssp TCC--EEEEEEHHHHHHHHH
T ss_pred CCc--Eecccchhhcchhcc
Confidence 676 999999999999985
No 186
>1x6o_A Eukaryotic initiation factor 5A; SGPP, structural genomics, PSI; 1.60A {Leishmania braziliensis} SCOP: b.34.5.2 b.40.4.5 PDB: 1xtd_A
Probab=23.67 E-value=38 Score=24.46 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=23.1
Q ss_pred eecCCCceEEEeecccccccCCccceeeceec
Q 033997 29 SFQGRNGRAFLFSHAMNIVVGPKEDRQLMTGL 60 (106)
Q Consensus 29 ~f~G~~G~AyLf~~v~Nv~~g~~~~r~m~TG~ 60 (106)
.=.|++|.|+.--.+.|+..|...++..-+|-
T Consensus 57 ~KpGKgG~A~vr~k~kni~TG~k~E~tf~s~~ 88 (174)
T 1x6o_A 57 SKTGKHGHAKVSIVATDIFTGNRLEDQAPSTH 88 (174)
T ss_dssp CCC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCCCceEEEEEEEECCCCCEEEEEeCCCC
Confidence 34699999998889999999999888777664
No 187
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=23.60 E-value=12 Score=18.30 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=14.8
Q ss_pred cCCceEEcc--cCcCCCCCCCCe
Q 033997 5 VGPRLYSCC--NCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~--~C~thLa~~~~l 25 (106)
.|.++|.|. .|..-++..+.|
T Consensus 4 ~~~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp SSCCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 467899998 598766655443
No 188
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.49 E-value=13 Score=20.90 Aligned_cols=21 Identities=10% Similarity=0.264 Sum_probs=14.9
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-++....|
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L 25 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAAL 25 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHH
T ss_pred CCCCCeECCCCCcccCCHHHH
Confidence 356789999998766655544
No 189
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.48 E-value=12 Score=18.18 Aligned_cols=21 Identities=14% Similarity=0.477 Sum_probs=14.4
Q ss_pred cCCceEEcc--cCcCCCCCCCCe
Q 033997 5 VGPRLYSCC--NCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~--~C~thLa~~~~l 25 (106)
.|.++|.|. .|..-++..+.|
T Consensus 2 ~~~k~~~C~~~~C~k~f~~~~~L 24 (38)
T 1bhi_A 2 SDDKPFLCTAPGCGQRFTNEDHL 24 (38)
T ss_dssp TTCCCEECCCTTTCCEESSHHHH
T ss_pred CCCcceECCCCCCCcccCCHHHH
Confidence 356889999 598766655444
No 190
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=23.14 E-value=18 Score=21.13 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=16.9
Q ss_pred cCCceEEcccCcCCCCCCCCee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|...+.....|.
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~ 24 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLN 24 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCCCCCccCChHHHH
Confidence 4567899999988887766654
No 191
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q
Probab=23.08 E-value=21 Score=24.63 Aligned_cols=34 Identities=29% Similarity=0.496 Sum_probs=22.5
Q ss_pred eeecCCCceEEEeec-----ccccccCCc--cceeeceecE
Q 033997 28 KSFQGRNGRAFLFSH-----AMNIVVGPK--EDRQLMTGLH 61 (106)
Q Consensus 28 k~f~G~~G~AyLf~~-----v~Nv~~g~~--~~r~m~TG~h 61 (106)
|.|+|++|+.|=... ++|...+.. +-|.-+.-.|
T Consensus 54 k~YHGKTGrV~nvt~~AvgivVnkqv~gKil~KrInVriEH 94 (116)
T 3jyw_Q 54 KFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEH 94 (116)
T ss_dssp STTSSCCCBCCCCCSSSSSEEEECCCSSSSCCCEEEECGGG
T ss_pred cccCCCCeEEEeecCcEEEEEEEEEECCeeeeeEEEECHhH
Confidence 689999999886653 577777665 3444433333
No 192
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.04 E-value=28 Score=20.58 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=8.1
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|+.
T Consensus 32 F~C~~C~~~L~~ 43 (73)
T 1wig_A 32 ALCVRCGQMFAE 43 (73)
T ss_dssp SCCSSSCCCCCS
T ss_pred CEeCCCCCCCCC
Confidence 667777777663
No 193
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=22.87 E-value=8.3 Score=24.48 Aligned_cols=18 Identities=39% Similarity=0.647 Sum_probs=14.9
Q ss_pred eeeecccCCCceeeEEEe
Q 033997 64 ADVFCSDCRVVLGWKYER 81 (106)
Q Consensus 64 ~DI~C~~C~~~lGWkY~~ 81 (106)
=+|.|-+|+..+|=+|++
T Consensus 3 iPVRCFTCGkvi~~~we~ 20 (70)
T 1twf_J 3 VPVRCFSCGKVVGDKWES 20 (70)
T ss_dssp CCSBCTTTCCBCTTCHHH
T ss_pred CCeecCCCCCChHHHHHH
Confidence 468999999999977654
No 194
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=22.85 E-value=12 Score=20.24 Aligned_cols=20 Identities=20% Similarity=0.466 Sum_probs=13.8
Q ss_pred CCceEEcccCcCCCCCCCCe
Q 033997 6 GPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l 25 (106)
+.++|.|..|...++..+.|
T Consensus 27 ~~~~~~C~~C~~~f~~~~~l 46 (60)
T 2adr_A 27 NEKPYPCGLCNRAFTRRDLL 46 (60)
T ss_dssp SSCSEECTTTCCEESSHHHH
T ss_pred CCCCccCCCCCCccCCHHHH
Confidence 45678888888766655444
No 195
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=22.69 E-value=7.9 Score=17.15 Aligned_cols=17 Identities=18% Similarity=0.511 Sum_probs=10.7
Q ss_pred eEEcccCcCCCCCCCCe
Q 033997 9 LYSCCNCRNHVALHDDV 25 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~l 25 (106)
+|.|..|...+...+.|
T Consensus 1 ~~~C~~C~k~f~~~~~l 17 (27)
T 1znf_A 1 XYKCGLCERSFVEKSAL 17 (27)
T ss_dssp -CBCSSSCCBCSSHHHH
T ss_pred CccCCCCCCcCCCHHHH
Confidence 36788888766654443
No 196
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.52 E-value=12 Score=17.30 Aligned_cols=18 Identities=33% Similarity=0.711 Sum_probs=13.2
Q ss_pred ceEEcc--cCcCCCCCCCCe
Q 033997 8 RLYSCC--NCRNHVALHDDV 25 (106)
Q Consensus 8 ~~y~C~--~C~thLa~~~~l 25 (106)
++|.|. .|..-++..+.|
T Consensus 2 k~~~C~~~~C~k~f~~~~~L 21 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDL 21 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHH
T ss_pred CCCcCcCCCCCCccCCHHHH
Confidence 578898 898777766554
No 197
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=21.81 E-value=14 Score=20.70 Aligned_cols=10 Identities=20% Similarity=0.743 Sum_probs=4.3
Q ss_pred ceEEcccCcC
Q 033997 8 RLYSCCNCRN 17 (106)
Q Consensus 8 ~~y~C~~C~t 17 (106)
++|.|..|..
T Consensus 48 ~~~~C~~C~~ 57 (73)
T 1f2i_G 48 KPFQCRICMR 57 (73)
T ss_dssp CCEECTTTCC
T ss_pred CCeECCCCCc
Confidence 3444444443
No 198
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.79 E-value=14 Score=20.82 Aligned_cols=21 Identities=19% Similarity=0.539 Sum_probs=14.9
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|...++....|
T Consensus 10 ~~~k~~~C~~C~k~f~~~~~L 30 (72)
T 1x6e_A 10 SGEKPYGCVECGKAFSRSSIL 30 (72)
T ss_dssp TTCCCEECSSSCCEESSHHHH
T ss_pred CCCCCccCCCCCCccCCHHHH
Confidence 456789999998766655444
No 199
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=21.75 E-value=12 Score=24.75 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=18.2
Q ss_pred ccCCceEEcccCcCCCCCCCCee
Q 033997 4 MVGPRLYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
.+|.++|.|..|..-++....|.
T Consensus 17 h~Gek~y~C~~C~k~F~~~~~L~ 39 (133)
T 2lt7_A 17 VDGRVYYICIVCKRSYVCLTSLR 39 (133)
T ss_dssp ETTEEEEEETTTCCEESCHHHHH
T ss_pred cCCCcCeECCCCCCCcCCHHHHH
Confidence 36778899999988887777665
No 200
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.55 E-value=17 Score=20.77 Aligned_cols=21 Identities=19% Similarity=0.589 Sum_probs=15.1
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 11 ~~~k~~~C~~C~~~f~~~~~l 31 (86)
T 1x6h_A 11 TGEKPYACSHCDKTFRQKQLL 31 (86)
T ss_dssp CCCCCEECSSSSCEESSHHHH
T ss_pred cCCCCCcCCCCCCccCCHHHH
Confidence 456789999998766665544
No 201
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=21.48 E-value=9.5 Score=20.86 Aligned_cols=18 Identities=17% Similarity=0.519 Sum_probs=15.6
Q ss_pred eEEcccCcCCCCCCCCee
Q 033997 9 LYSCCNCRNHVALHDDVI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
-|.|.-|...|++.++|+
T Consensus 5 GFiCP~C~~~l~s~~~L~ 22 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELF 22 (34)
T ss_dssp EEECTTTCCEESSHHHHH
T ss_pred ccCCcHHHHHcCCHHHHH
Confidence 499999999999887765
No 202
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=21.40 E-value=32 Score=21.20 Aligned_cols=37 Identities=11% Similarity=0.331 Sum_probs=27.2
Q ss_pred ceEEcccCcCCCCCC---CCeeeeeecCCCceEEEeeccccccc
Q 033997 8 RLYSCCNCRNHVALH---DDVISKSFQGRNGRAFLFSHAMNIVV 48 (106)
Q Consensus 8 ~~y~C~~C~thLa~~---~~liSk~f~G~~G~AyLf~~v~Nv~~ 48 (106)
.+..|..|+.+|... +.|+++ +-|+||-+.+-+=+..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSR----QAKLAYPIKDGIPYML 46 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEET----TTTEEEEEETTEECCC
T ss_pred hheECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeeeC
Confidence 367899999999865 457765 3699999887654443
No 203
>3sjl_A Methylamine utilization protein MAUG; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 3sle_A* 3svw_A* 3sxt_A* 3l4o_A* 3pxs_A* 3pxt_A* 3pxw_A* 3l4m_A* 3sws_A* 3orv_A* 3rmz_A* 3rlm_A* 3rn0_A* 3rn1_A*
Probab=21.22 E-value=20 Score=28.80 Aligned_cols=31 Identities=23% Similarity=0.397 Sum_probs=16.7
Q ss_pred cccCCceEEcccCcCC-CCCCCCe-------eeeeecCC
Q 033997 3 EMVGPRLYSCCNCRNH-VALHDDV-------ISKSFQGR 33 (106)
Q Consensus 3 ~l~g~~~y~C~~C~th-La~~~~l-------iSk~f~G~ 33 (106)
.|++....+|+.|+.+ .+..|.+ +|.+..|.
T Consensus 22 rLS~~~~iSCaSCH~p~~g~~D~~~~~~~~~~s~G~~g~ 60 (373)
T 3sjl_A 22 ALSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQ 60 (373)
T ss_dssp GGSTTSCCCHHHHSBGGGTTBCCC---------------
T ss_pred ccCCCCCcCchhhCCccccCCCCcccccccccccCCCCC
Confidence 3778889999999987 3444433 56666653
No 204
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=21.20 E-value=34 Score=21.03 Aligned_cols=35 Identities=20% Similarity=0.518 Sum_probs=26.3
Q ss_pred eEEcccCcCCCCCC---CCeeeeeecCCCceEEEeecccccc
Q 033997 9 LYSCCNCRNHVALH---DDVISKSFQGRNGRAFLFSHAMNIV 47 (106)
Q Consensus 9 ~y~C~~C~thLa~~---~~liSk~f~G~~G~AyLf~~v~Nv~ 47 (106)
+..|..|+.+|... +.|+++ +-|+||-+.+-+=+.
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvm 45 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICK----GDRLAFPIKDGIPMM 45 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEET----TTTEEEEEETTEECC
T ss_pred heECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeee
Confidence 67899999999765 457765 369999988755443
No 205
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.16 E-value=13 Score=22.28 Aligned_cols=24 Identities=8% Similarity=0.189 Sum_probs=19.1
Q ss_pred cCCceEEcccCcCCCCCCCCeeee
Q 033997 5 VGPRLYSCCNCRNHVALHDDVISK 28 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liSk 28 (106)
.+.++|.|..|..-+...+.|..-
T Consensus 9 ~~ekpy~C~~CgK~F~~~s~L~~H 32 (66)
T 2epp_A 9 REAGILPCGLCGKVFTDANRLRQH 32 (66)
T ss_dssp CCCCCCCCTTTCCCCSCHHHHHHH
T ss_pred CCccCcCCCCCCCccCCHHHHHhh
Confidence 456889999999988887777643
No 206
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.15 E-value=33 Score=20.31 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=8.5
Q ss_pred EcccCcCCCCCCCCee
Q 033997 11 SCCNCRNHVALHDDVI 26 (106)
Q Consensus 11 ~C~~C~thLa~~~~li 26 (106)
.|..|+.++...+.+|
T Consensus 17 ~C~~C~~~I~~~~~~~ 32 (82)
T 1x63_A 17 KCKGCFKAIVAGDQNV 32 (82)
T ss_dssp BCSSSCCBCCSSSCEE
T ss_pred cCccCCcccccCceEE
Confidence 4566666655444433
No 207
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.01 E-value=27 Score=20.13 Aligned_cols=13 Identities=15% Similarity=0.593 Sum_probs=6.1
Q ss_pred cccCcCCCCCCCC
Q 033997 12 CCNCRNHVALHDD 24 (106)
Q Consensus 12 C~~C~thLa~~~~ 24 (106)
|..|+.++...+.
T Consensus 8 C~~C~~~I~~~~~ 20 (72)
T 1x4k_A 8 CQECKKTIMPGTR 20 (72)
T ss_dssp BSSSCCCCCSSSC
T ss_pred CccCCCcccCCce
Confidence 4555555544433
No 208
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.45 E-value=15 Score=22.78 Aligned_cols=18 Identities=11% Similarity=0.405 Sum_probs=10.1
Q ss_pred CCceEEcccCcCCCCCCC
Q 033997 6 GPRLYSCCNCRNHVALHD 23 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~ 23 (106)
|.++|.|..|..-+...+
T Consensus 53 ~~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 53 AAQVFPCKYCPATFYSSP 70 (85)
T ss_dssp CSSSEECTTSSCEESSHH
T ss_pred CCCccCCCCCCCEeCCHH
Confidence 455666666665544433
No 209
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.43 E-value=33 Score=20.34 Aligned_cols=10 Identities=20% Similarity=0.876 Sum_probs=5.1
Q ss_pred EcccCcCCCC
Q 033997 11 SCCNCRNHVA 20 (106)
Q Consensus 11 ~C~~C~thLa 20 (106)
.|..|+.++.
T Consensus 17 ~C~~C~~~I~ 26 (81)
T 1v6g_A 17 RCFSCDQFIE 26 (81)
T ss_dssp BCTTTCCBCC
T ss_pred cCccccCEec
Confidence 4555555554
No 210
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.42 E-value=33 Score=20.91 Aligned_cols=9 Identities=22% Similarity=0.940 Sum_probs=4.7
Q ss_pred EcccCcCCC
Q 033997 11 SCCNCRNHV 19 (106)
Q Consensus 11 ~C~~C~thL 19 (106)
.|..|+.++
T Consensus 27 ~C~~C~~~I 35 (90)
T 2dar_A 27 MCAHCNQVI 35 (90)
T ss_dssp BBSSSCCBC
T ss_pred CCccCCCEe
Confidence 355555555
No 211
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.24 E-value=33 Score=19.72 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=7.0
Q ss_pred EEcccCcCCCCC
Q 033997 10 YSCCNCRNHVAL 21 (106)
Q Consensus 10 y~C~~C~thLa~ 21 (106)
|.|..|+.+|..
T Consensus 32 F~C~~C~~~L~~ 43 (70)
T 2d8x_A 32 FRCDLCQEVLAD 43 (70)
T ss_dssp SBCSSSCCBCSS
T ss_pred CEeCCCCCcCCC
Confidence 556666666554
No 212
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.01 E-value=13 Score=19.33 Aligned_cols=21 Identities=10% Similarity=0.078 Sum_probs=13.9
Q ss_pred cCCceEEcccCcCCCCCCCCe
Q 033997 5 VGPRLYSCCNCRNHVALHDDV 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.++|.|..|..-+.....|
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L 28 (48)
T 2epr_A 8 RTRKQVACEICGKIFRDVYHL 28 (48)
T ss_dssp CCCCSEEETTTTEEESSHHHH
T ss_pred CCCcCeeCCCCCcccCCHHHH
Confidence 356789999997655554443
Done!