Query 034001
Match_columns 106
No_of_seqs 109 out of 732
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:35:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034001.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034001hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a8u_A Major pollen allergen B 100.0 7.1E-34 2.4E-38 193.2 13.9 105 2-106 48-156 (159)
2 2wql_A Major allergen DAU C 1; 100.0 1.1E-33 3.9E-38 191.5 14.4 103 2-104 48-154 (154)
3 2vjg_A Major allergen DAU C 1; 100.0 5.1E-33 1.8E-37 188.2 14.4 103 2-104 48-154 (154)
4 3ie5_A Phenolic oxidative coup 100.0 4E-33 1.4E-37 190.7 12.9 104 2-106 55-162 (165)
5 1tw0_A Pathogenesis-related cl 100.0 4.7E-32 1.6E-36 183.6 15.1 105 2-106 47-155 (157)
6 3rws_A MTN13 protein; zeatin, 100.0 2.5E-32 8.6E-37 187.2 13.8 103 2-106 54-162 (168)
7 2qim_A PR10.2B; trans-zeatin, 100.0 6.9E-32 2.4E-36 182.8 14.5 105 2-106 48-156 (158)
8 1icx_A Protein LLR18A, LLPR10. 100.0 8.9E-32 3E-36 181.8 13.3 104 2-106 47-154 (155)
9 2i9y_A Major latex protein-lik 100.0 7E-32 2.4E-36 184.3 12.7 104 2-105 62-166 (166)
10 1e09_A PRU AV 1; allergen, maj 100.0 2.2E-31 7.6E-36 180.5 13.6 104 2-106 48-156 (159)
11 2flh_A Cytokinin-specific bind 100.0 1.8E-31 6E-36 180.6 12.7 104 2-106 48-155 (155)
12 2vq5_A S-norcoclaurine synthas 100.0 2.6E-31 9E-36 186.6 9.8 105 2-106 74-181 (201)
13 1vjh_A BET V I allergen family 99.9 4.1E-27 1.4E-31 153.7 11.1 83 24-106 39-122 (122)
14 3jrs_A PYL1, putative uncharac 99.8 8.2E-21 2.8E-25 133.8 10.6 78 2-81 97-175 (208)
15 3rt2_A Abscisic acid receptor 99.8 1.5E-20 5.3E-25 130.1 11.5 76 2-79 69-147 (183)
16 3kl1_A PYL2, putative uncharac 99.8 2.4E-19 8.1E-24 124.8 14.0 76 2-77 77-155 (190)
17 3k3k_A Abscisic acid receptor 99.8 2.7E-19 9.4E-24 126.2 11.4 71 2-76 93-163 (211)
18 3oqu_A Abscisic acid receptor 99.8 3.1E-18 1.1E-22 120.3 12.9 75 2-78 93-170 (205)
19 3f08_A Uncharacterized protein 99.8 1.2E-17 4.1E-22 111.2 12.9 67 5-76 43-110 (146)
20 3p51_A Uncharacterized protein 99.8 2.9E-17 1E-21 111.1 13.4 69 2-77 46-118 (160)
21 3qrz_A Abscisic acid receptor 99.7 2.5E-19 8.7E-24 127.3 -0.3 72 3-76 122-193 (223)
22 3oji_A Abscisic acid receptor 99.7 1.5E-16 5.1E-21 110.4 12.8 71 4-76 79-157 (189)
23 2le1_A Uncharacterized protein 99.5 6.3E-14 2.2E-18 92.4 10.7 69 2-75 45-113 (151)
24 2d4r_A Hypothetical protein TT 98.4 3.7E-05 1.3E-09 48.2 14.1 67 5-77 46-112 (147)
25 3tl1_A WHIE ORF VI, polyketide 98.4 2.8E-05 9.4E-10 51.9 13.5 59 15-78 59-117 (159)
26 3tfz_A Cyclase; helix-GRIP, BE 98.3 2.7E-05 9.3E-10 52.0 12.4 67 10-79 54-120 (172)
27 3tvq_A Multifunctional cyclase 98.3 3.4E-05 1.2E-09 52.0 12.6 59 15-78 59-117 (169)
28 3p9v_A Uncharacterized protein 97.9 0.00021 7.3E-09 47.2 11.1 54 20-77 67-120 (161)
29 1t17_A Conserved hypothetical 97.8 8.1E-05 2.8E-09 48.1 6.7 65 6-76 51-115 (148)
30 3ijt_A SMU.440, putative uncha 97.7 0.00083 2.8E-08 44.4 11.3 63 3-74 60-122 (155)
31 2pcs_A Conserved protein; stru 96.8 0.047 1.6E-06 35.1 11.6 53 24-78 66-118 (162)
32 3ggn_A Uncharacterized protein 96.7 0.059 2E-06 34.8 12.1 64 9-77 48-114 (155)
33 2ns9_A Hypothetical protein AP 96.0 0.15 5.1E-06 32.2 11.9 51 24-77 75-125 (157)
34 2leq_A Uncharacterized protein 95.5 0.22 7.4E-06 30.8 9.9 94 3-101 44-140 (146)
35 1xn6_A Hypothetical protein BC 95.0 0.081 2.8E-06 33.3 6.3 61 3-75 45-105 (143)
36 1z94_A Conserved hypothetical 94.3 0.53 1.8E-05 29.2 13.2 95 3-103 47-143 (147)
37 1xuv_A Hypothetical protein MM 93.8 0.87 3E-05 29.7 13.3 69 4-73 67-136 (178)
38 2il5_A Hypothetical protein; s 92.6 1.3 4.3E-05 28.5 11.2 69 4-75 59-128 (171)
39 2lcg_A Uncharacterized protein 91.9 1.4 4.8E-05 27.4 12.4 84 3-101 46-131 (142)
40 3put_A Hypothetical conserved 88.6 3.5 0.00012 26.6 14.1 93 4-101 55-150 (166)
41 3rd6_A MLL3558 protein; struct 86.7 4.5 0.00015 25.8 14.2 94 4-102 54-150 (161)
42 2l8o_A Uncharacterized protein 86.5 4.3 0.00015 25.4 11.7 85 4-102 48-134 (144)
43 3q64_A MLL3774 protein; struct 84.4 6 0.0002 25.2 13.0 93 4-101 55-150 (162)
44 3uid_A Putative uncharacterize 83.5 6.9 0.00024 25.2 11.2 95 4-104 58-162 (168)
45 2lak_A AHSA1-like protein RHE_ 82.2 1.4 4.8E-05 28.0 3.6 64 4-72 48-112 (160)
46 3q6a_A Uncharacterized protein 82.2 5.3 0.00018 24.4 6.2 81 4-101 40-123 (135)
47 3qsz_A STAR-related lipid tran 79.4 5.2 0.00018 26.0 5.7 29 48-77 123-151 (189)
48 2l9p_A Uncharacterized protein 74.6 13 0.00043 23.6 6.4 67 4-73 53-124 (164)
49 2lgh_A Uncharacterized protein 74.5 13 0.00044 23.1 12.6 60 4-73 47-108 (144)
50 1xn5_A BH1534 unknown conserve 73.2 14 0.00047 22.9 8.3 57 3-72 42-98 (146)
51 1ln1_A PC-TP, phosphatidylchol 70.1 10 0.00034 25.0 5.3 30 48-77 152-181 (214)
52 3eli_A AHSA1, AHA1 domain prot 68.1 19 0.00064 22.3 11.7 91 3-101 48-143 (152)
53 3q63_A MLL2253 protein; struct 60.0 28 0.00097 21.6 9.0 92 4-102 47-140 (151)
54 2nn5_A Hypothetical protein EF 59.4 34 0.0012 22.3 10.6 71 21-103 88-158 (184)
55 1xfs_A NC_840354, conserved hy 58.7 32 0.0011 21.8 10.5 69 3-73 54-135 (178)
56 3pu2_A Uncharacterized protein 54.3 38 0.0013 21.4 11.6 67 4-74 58-126 (164)
57 2kew_A Uncharacterized protein 49.8 30 0.001 21.5 4.6 43 21-72 61-103 (152)
58 4fpw_A CALU16; structural geno 46.3 53 0.0018 21.4 5.5 69 24-102 72-140 (181)
59 2ldk_A Uncharacterized protein 45.6 54 0.0018 20.5 14.2 94 4-103 57-160 (172)
60 3oh8_A Nucleoside-diphosphate 45.0 48 0.0017 25.0 5.8 64 4-74 47-112 (516)
61 3ni8_A PFC0360W protein; heat 44.5 58 0.002 20.6 10.6 79 22-102 71-153 (158)
62 2qpv_A Uncharacterized protein 40.4 38 0.0013 21.7 4.0 18 53-71 107-124 (156)
63 3nrf_A APAG protein; structura 38.9 67 0.0023 19.7 5.3 50 24-73 49-105 (106)
64 3p0l_A Steroidogenic acute reg 37.2 54 0.0018 21.7 4.5 51 49-102 156-213 (221)
65 1x53_A Activator of 90 kDa hea 36.4 72 0.0025 19.3 6.2 73 24-103 64-137 (145)
66 2r5x_A Protein YUGN, uncharact 25.0 93 0.0032 19.7 3.7 26 80-105 95-120 (129)
67 2i46_A Adrenocortical dysplasi 22.8 33 0.0011 22.3 1.3 81 24-105 72-157 (161)
68 2r55_A STAR-related lipid tran 22.4 1.7E+02 0.0059 19.2 5.5 28 51-78 172-201 (231)
69 2pso_A STAR-related lipid tran 22.3 1.8E+02 0.0063 19.5 8.2 55 48-103 171-227 (237)
70 2lf2_A Uncharacterized protein 21.8 1.6E+02 0.0053 18.5 12.2 68 4-73 61-133 (175)
71 1ug8_A Poly(A)-specific ribonu 21.4 33 0.0011 20.3 1.0 26 80-105 3-28 (87)
72 3oyy_A EF-P, elongation factor 20.4 1.1E+02 0.0039 20.4 3.7 22 23-44 61-82 (191)
No 1
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=100.00 E-value=7.1e-34 Score=193.21 Aligned_cols=105 Identities=16% Similarity=0.299 Sum_probs=96.5
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||+|+|.++++..++||||+++|+++|+++|+++||+++ ..|++|+++++|.|.++|+|+++|+++|++.++..
T Consensus 48 gg~Gsir~~~~~~g~~~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~~~ 127 (159)
T 4a8u_A 48 GGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHE 127 (159)
T ss_dssp SSTTCEEEEECCTTSSCSEEEEEEEEEETTTTEEEEEEEEETTCBTTEEEEEEEEEEEECTTSCEEEEEEEEEEESSSCC
T ss_pred CCCceEEEEEEecCCCccEEEEEEEEEccccCEEEEEEeeCCCCccceEEEEEEEEEEECCCCceEEEEEEEEEECCCCc
Confidence 58999999999977777799999999999999999999999987 56999999999999988899999999999999988
Q ss_pred CChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 81 PDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
++|+.+ ++.+.+|+|+||+||++||+
T Consensus 128 ~~~~~~k~~~~~~~~~~k~ie~yll~np~ 156 (159)
T 4a8u_A 128 VKAEQIKASKEMGETLLRAVESYLLAHSD 156 (159)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhChh
Confidence 888765 78899999999999999996
No 2
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=100.00 E-value=1.1e-33 Score=191.48 Aligned_cols=103 Identities=20% Similarity=0.230 Sum_probs=95.7
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||+|+|.++++..++||||+++|+++|+++|+++||+.+ ..|++|+.+++|.|.++|+|+++|+++|++.++..
T Consensus 48 g~~Gsir~~t~~~g~~~~~~kErle~iD~~~~~~~y~iieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t~~Y~~~~~~~ 127 (154)
T 2wql_A 48 GGAGTVRIITLPEGSPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAV 127 (154)
T ss_dssp SSTTCEEEEECCTTCSCCEEEEEEEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCC
T ss_pred CCCCeEEEEEEcCCCCceEEEEEEEEEehhhCEEEEEEEeccccccceEEEEEEEEEeeCCCCcEEEEEEEEEEECCCCC
Confidence 68999999999977777899999999999999999999999987 57999999999999999999999999999999999
Q ss_pred CChhhHHHH---HHHHHHHHHhcCCCC
Q 034001 81 PDPQGIVNL---AIEMTKGIEAHHPPK 104 (106)
Q Consensus 81 ~~p~~~~~~---~~~~~k~ie~yl~~~ 104 (106)
++|+.+++. +.+|+|+||+|||||
T Consensus 128 ~~ee~~~~~~~~~~~~~KaiEayLlan 154 (154)
T 2wql_A 128 VPEENIKFADAQNTALFKAIEAYLIAN 154 (154)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhHHHHHHHHHhcC
Confidence 888876554 788999999999998
No 3
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=100.00 E-value=5.1e-33 Score=188.16 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=95.3
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||+|+|..+++..++||||+++|+++|+++|+++||+++ ..|++|+++++|.|.++|||+++|+++|++.++..
T Consensus 48 g~~Gsir~~~~~~g~~~~~~kErl~~iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p~~~ggs~v~wt~~y~~~~~~~ 127 (154)
T 2vjg_A 48 GGAGTVRIITLPEGSPITTMTVRTDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVPTADGGSITKTTAIFHTKGDAV 127 (154)
T ss_dssp SSTTCEEEEECCTTCSCCEEEEEEEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEECTTSCEEEEEEEEEEESTTCC
T ss_pred CCCceEEEEEecCCCCceEEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEECCCCcEEEEEEEEEEECCCCC
Confidence 68999999999866666799999999999999999999999987 46999999999999988899999999999999998
Q ss_pred CChhh---HHHHHHHHHHHHHhcCCCC
Q 034001 81 PDPQG---IVNLAIEMTKGIEAHHPPK 104 (106)
Q Consensus 81 ~~p~~---~~~~~~~~~k~ie~yl~~~ 104 (106)
++|+. .++.+..|+|+||+||++|
T Consensus 128 ~~~~~~~~~~~~~~~~~k~ie~yllan 154 (154)
T 2vjg_A 128 VPEENIKFADAQNTALFKAIEAYLIAN 154 (154)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88877 4688999999999999987
No 4
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=100.00 E-value=4e-33 Score=190.67 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=95.8
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||+|+|.+++++.++||||+++|+++|+++|+++||+++ ..|++|+++++|. .++|+|+++|+++|++.++..
T Consensus 55 g~~Gsir~~~~~~g~~~~~~kErl~~iD~~~~~~~Y~iieG~~l~~~~~~y~~~i~v~-~~~ggs~vkwt~~y~~~~~~~ 133 (165)
T 3ie5_A 55 GGVGTVTKITFVDGHPLTYMLHKFDEIDAANFYCKYTLFEGDVLRDNIEKVVYEVKLE-AVGGGSKGKITVTYHPKPGCT 133 (165)
T ss_dssp SSTTCEEEEEECTTSSCCEEEEEEEEEEGGGTEEEEEEEEEGGGTTTEEEEEEEEEEE-EETTEEEEEEEEEEEECTTCC
T ss_pred CCCCeEEEEEecCCCCCceEEEEEEEEchhcCEEEEEEecCCCCccceEEEEEEEEEE-eCCCceEEEEEEEEEECCCCC
Confidence 68999999999867766799999999999999999999999987 5799999999999 567799999999999999998
Q ss_pred CChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 81 PDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
++|+.+ ++.+..|+|+||+||++||+
T Consensus 134 ~~~e~~k~~~~~~~~~~K~ie~yllanp~ 162 (165)
T 3ie5_A 134 VNEEEVKIGEKKAYEFYKQVEEYLAANPE 162 (165)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 888775 68899999999999999996
No 5
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=100.00 E-value=4.7e-32 Score=183.57 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=96.4
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|.++++..++||||+++|+++|+++|+++||+++. .|++|+++++|.|.+++||+++|+++|++.++..
T Consensus 47 g~~Gsir~~~~~~G~~~~~~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~~ 126 (157)
T 1tw0_A 47 GGVGTIKKITANEGDKTSFVLQKVDAIDEANLGYDYSIVGGTGLPESLEKLSFETKVVAGSGGGSISKVTLKFHTKGDAP 126 (157)
T ss_dssp SSTTCEEEEEEEETTEEEEEEEEEEEEETTTTEEEEEEEECTTSCTTEEEEEEEEEEEECSSSSEEEEEEEEEEESTTCC
T ss_pred CCCCeEEEEEeeCCCccceEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCC
Confidence 579999999999544457899999999999999999999999874 6999999999999987789999999999999998
Q ss_pred CChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 81 PDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
++|+.+ ++.+..|+|+||+||++||+
T Consensus 127 ~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 155 (157)
T 1tw0_A 127 LSDAVRDDALAKGAGFFKAIEGYVLANPA 155 (157)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 888877 78899999999999999995
No 6
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=100.00 E-value=2.5e-32 Score=187.17 Aligned_cols=103 Identities=24% Similarity=0.336 Sum_probs=93.3
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC--ceeEEEEEEEEEecCCCceEEEEEEEEEeCCC-
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD--KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE- 78 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~--~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~- 78 (106)
|++||||+|+|. |+..++||||+++|+++|+++|+++||+++. +|++|+++++|.|.++|||+++|+++|++.++
T Consensus 54 gg~Gsir~~t~~--g~~~~~kErl~~iD~~~~~~sY~iiegd~l~~~p~~~y~~ti~v~p~~~ggs~v~wt~~y~~~~~d 131 (168)
T 3rws_A 54 GGPGTIKKLTFV--GDFGSTKQHIDMVDRENCAYTYSVYEGIALSDQPLEKIVFEFKLVPTPEEGCIVKSTTKYYTKGDD 131 (168)
T ss_dssp SSTTCEEEEEES--SSSCEEEEEEEEEETTTTEEEEEECSSCCBTTBCEEEEEEEEEEEECTTSCEEEEEEEEEEECSSS
T ss_pred CCCCeEEEEEEc--CCCeEEEEEEEEEcccCCEEEEEEEccCcccCcCceEEEEEEEEEECCCCceEEEEEEEEEECCCc
Confidence 689999999998 4457999999999999999999999999984 39999999999999888999999999999998
Q ss_pred CCCChhh---HHHHHHHHHHHHHhcCCCCCC
Q 034001 79 DVPDPQG---IVNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 79 ~~~~p~~---~~~~~~~~~k~ie~yl~~~~~ 106 (106)
..++|+. +++.+.+|+|+||+||++||+
T Consensus 132 ~~~~~e~~k~~~~~~~~~~k~ie~yllanp~ 162 (168)
T 3rws_A 132 IELSKDYLEAGIERFEGFTKAVESFLLANPD 162 (168)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 5566655 578899999999999999996
No 7
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=100.00 E-value=6.9e-32 Score=182.80 Aligned_cols=105 Identities=20% Similarity=0.289 Sum_probs=96.6
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|.++++..++||||+++|+++|+++|+++||+.+. .|++|+++++|.|.++|||+++|+++|++.++..
T Consensus 48 gg~Gsir~~~~~~g~~~~~~kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~~ 127 (158)
T 2qim_A 48 GGPGTIKKLTFIEGGESKYVLHKIEAIDEANLGYNYSIVGGVGLPDTIEKISFETKLVEGANGGSIGKVTIKIETKGDAQ 127 (158)
T ss_dssp SSTTCEEEEEEEETTEEEEEEEEEEEEEGGGTEEEEEEEEESSCCCSEEEEEEEEEEEECSTTCEEEEEEEEEEESTTCC
T ss_pred CCCCeEEEEEEcCCCcceeEEEEEEEEecCCCEEEEEEEeccCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCCC
Confidence 579999999999544557899999999999999999999999874 6999999999999988889999999999999998
Q ss_pred CChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 81 PDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
++|+.+ ++.+.+|+|+||+||++||+
T Consensus 128 ~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 128 PNEEEGKAAKARGDAFFKAIESYLSAHPD 156 (158)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 888877 78899999999999999996
No 8
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=99.98 E-value=8.9e-32 Score=181.76 Aligned_cols=104 Identities=19% Similarity=0.295 Sum_probs=94.8
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|.++++..++||||+++|+++|+++|+++||+.+. .|++|+++++|.|.+++||+++|+++|++.++.
T Consensus 47 g~~Gsir~~~~~~G~~~~~~kErl~~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~~~~~gs~v~w~~~y~~~~~~- 125 (155)
T 1icx_A 47 GGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTKGDV- 125 (155)
T ss_dssp SSTTCEEEEEEESSSSEEEEEEEEEEEEGGGTEEEEEEEEETTSCTTEEEEEEEEEEEECGGGCEEEEEEEEEEESSSS-
T ss_pred CCCCeEEEEEEecCCcceeEEEEEEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEecCCCCEEEEEEEEEEECCCC-
Confidence 579999999999444447899999999999999999999999874 699999999999987778999999999999988
Q ss_pred CChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 81 PDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
++|+.+ ++.+..|+|+||+||++||+
T Consensus 126 ~~~~~~~~~~~~~~~~~k~ie~yll~~p~ 154 (155)
T 1icx_A 126 LSETVRDQAKFKGLGLFKAIEGYVLAHPD 154 (155)
T ss_dssp CCHHHHTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888777 78999999999999999996
No 9
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=99.98 E-value=7e-32 Score=184.30 Aligned_cols=104 Identities=38% Similarity=0.784 Sum_probs=97.9
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCC-ceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEH-SCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g-~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|..+|++.++||||+++|+++++++|+++||+++..|++|+++++|.|.++| ||+++|+++|++.+++.
T Consensus 62 gg~Gsir~~~~~~gg~~~~~kErl~~iD~~~~~~~y~iieGd~~~~~~~~~~ti~v~p~~~g~gs~v~wt~~ye~~~~~~ 141 (166)
T 2i9y_A 62 GTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEV 141 (166)
T ss_dssp CSTTCCCEEEEEETTEEEEEEEEEEEEETTTTEEEEEECCTTGGGTEEEEEEEEEEEEEEETTEEEEEEEEEEEESSTTT
T ss_pred CCCCeEEEEEEecCCCceEEEEEEEEEeccCcEEEEEEEeCCCCCCeeEEEEEEEEEECCCCCCcEEEEEEEEEECCCCC
Confidence 78999999999978877899999999999999999999999987679999999999998654 89999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHhcCCCCC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHHPPKQ 105 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl~~~~ 105 (106)
++|..+++++..|+|+||+||++||
T Consensus 142 ~~p~~~~~~~~~~~k~ie~~l~~~~ 166 (166)
T 2i9y_A 142 AHPETLLQFCVEVSKEIDEHLLAEE 166 (166)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999987
No 10
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=99.97 E-value=2.2e-31 Score=180.46 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=95.9
Q ss_pred CCCCeEEEEEEecCCee-eEEEEEEEEEeCCCCEEEEEEEeCcccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCCC
Q 034001 2 GKPGTVITWTYKHDGVT-EIAKEIIEEIDDEKNSTTFKVIEGHLLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSED 79 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~-~~~kErl~~~D~~~~~~~y~iieg~~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~ 79 (106)
|++||||.|+|. +|.+ .++||||+.+|+++|+++|+++||+++. .|++|+++++|.|.++|||+++|+++|++.++.
T Consensus 48 gg~Gsvr~~~~~-~G~~~~~~kErl~~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~~y~~~~~~ 126 (159)
T 1e09_A 48 GGPGTIKKITFG-EGSQYGYVKHKIDSIDKENYSYSYTLIEGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNV 126 (159)
T ss_dssp SSTTCEEEEEEC-CSSSCEEEEEEEEEEETTTTEEEEEECCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEEEEEECSSC
T ss_pred CCCceEEEEEec-CCCCceEEEEEEEEEcCCCCEEEEEEEecccCcccceEEEEEEEEEecCCCCEEEEEEEEEEECCCC
Confidence 579999999998 5543 7899999999999999999999999875 699999999999998888999999999999999
Q ss_pred CCChhhH---HHHHHHHHHHHHhcCCCCCC
Q 034001 80 VPDPQGI---VNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 80 ~~~p~~~---~~~~~~~~k~ie~yl~~~~~ 106 (106)
.++|+.+ ++.+..|+|+||+||++||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~k~ie~yll~~~~ 156 (159)
T 1e09_A 127 EIKEEHVKAGKEKASNLFKLIETYLKGHPD 156 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 9889877 78899999999999999996
No 11
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=99.97 E-value=1.8e-31 Score=180.55 Aligned_cols=104 Identities=19% Similarity=0.274 Sum_probs=86.4
Q ss_pred CCCCeEEEEEEecC-CeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCC
Q 034001 2 GKPGTVITWTYKHD-GVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSED 79 (106)
Q Consensus 2 g~~Gsvr~~~~~~~-g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~ 79 (106)
|++||||.|+|.++ ++ .++||||+++|+++|+++|+++||+.+ .+|++|+++++|.|.++|+|+++|+++|++.++.
T Consensus 48 gg~Gsvr~~~~~~g~~~-~~~kErl~~iD~~~~~~~y~iieg~~l~~~~~~~~~~i~v~p~~~ggs~v~wt~~y~~~~~~ 126 (155)
T 2flh_A 48 GGVGTILIFNFLPEVSP-SYQREEITEFDESSHEIGLQVIEGGYLSQGLSYYKTTFKLSEIEEDKTLVNVKISYDHDSDI 126 (155)
T ss_dssp SSTTCEEEEEECTTSSS-CEEEEEEEEEETTTTEEEEEEEEEGGGGTTCSEEEEEEEEEEEETTEEEEEEEEEEEC----
T ss_pred CCCCeEEEEEeeCCCCC-cEEEEEEEEEeCCCCEEEEEEEeccccccCceEEEEEEEEEECCCCCEEEEEEEEEEECCCC
Confidence 68999999999854 44 799999999999999999999999987 4699999999999998889999999999999988
Q ss_pred CCChhhHH--HHHHHHHHHHHhcCCCCCC
Q 034001 80 VPDPQGIV--NLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 80 ~~~p~~~~--~~~~~~~k~ie~yl~~~~~ 106 (106)
.+.+..++ +.+..|+|+||+||++||.
T Consensus 127 ~~~~~~~~~~~~~~~~~k~ie~yll~~~~ 155 (155)
T 2flh_A 127 EEKVTPTKTSQSTLMYLRRLERYLSNGSA 155 (155)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHC----
T ss_pred ccChhHhhhHHHHHHHHHHHHHHHhhCCC
Confidence 77777888 9999999999999999984
No 12
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=99.97 E-value=2.6e-31 Score=186.58 Aligned_cols=105 Identities=23% Similarity=0.334 Sum_probs=93.9
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|.+++++.++||||+++|+++|+++|+++||+.+ ..|++|+++++|.|.++|||+++|+++|++.++.+
T Consensus 74 Gg~GsIR~lt~~~G~~~~~vkErle~iDde~~~~sYsiieGd~l~~~~~~y~~tikv~p~~dggs~vkWt~~ye~~~~~~ 153 (201)
T 2vq5_A 74 GGVGTILDMTFVPGEFPHEYKEKFILVDNEHRLKKVQMIEGGYLDLGVTYYMDTIHVVPTGKDSCVIKSSTEYHVKPEFV 153 (201)
T ss_dssp SSTTCEEEEECCTTCSSCEEEEEEEEEETTTTEEEEEEEEEGGGGTTEEEEEEEEEEEEEETTEEEEEEEEEEEECGGGH
T ss_pred CCCCeEEEEEecCCCcccEEEEEEEEEchhhCEEEEEEEecCccccceeEEEEEEEEEECCCCCeEEEEEEEEEECCCCC
Confidence 68999999999955555799999999999999999999999987 56999999999999988899999999999998873
Q ss_pred C--ChhhHHHHHHHHHHHHHhcCCCCCC
Q 034001 81 P--DPQGIVNLAIEMTKGIEAHHPPKQA 106 (106)
Q Consensus 81 ~--~p~~~~~~~~~~~k~ie~yl~~~~~ 106 (106)
+ ++...++.+..|+|+||+||++||+
T Consensus 154 ~~~e~~~~~~~~~~~~KaiE~yLlanp~ 181 (201)
T 2vq5_A 154 KIVEPLITTGPLAAMADAISKLVLEHKS 181 (201)
T ss_dssp HHHTTTCCSHHHHHHHHHHHHHHHSCCC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhCcc
Confidence 3 3445578899999999999999985
No 13
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=99.95 E-value=4.1e-27 Score=153.66 Aligned_cols=83 Identities=19% Similarity=0.371 Sum_probs=77.9
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecC-CCceEEEEEEEEEeCCCCCCChhhHHHHHHHHHHHHHhcCC
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKG-EHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAHHP 102 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~-~g~s~v~W~~~ye~~~~~~~~p~~~~~~~~~~~k~ie~yl~ 102 (106)
||+++|+++++++|+++||++++.|++|+.+++|+|.+ ++||+++|+++|++.++++++|+.+++.+.+|+|+||+||+
T Consensus 39 ~ie~iD~~~~~~~y~iieGd~~~~~~~~~~~~~v~~~~~~~gs~vkwt~~ye~~~~~~~~p~~~~~~~~~~~k~ie~yll 118 (122)
T 1vjh_A 39 EIEAVDLVKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDGSHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAIL 118 (122)
T ss_dssp EEEEEETTTTEEEEEEECTTGGGTEEEEEEEEEEEECSSSSCEEEEEEEEEEESSTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccCEEEEEEEEccccccEEEEEEEEEEEEecCCCCeEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999887899999999999985 56899999999999999999999999999999999999999
Q ss_pred CCCC
Q 034001 103 PKQA 106 (106)
Q Consensus 103 ~~~~ 106 (106)
+||+
T Consensus 119 ~~p~ 122 (122)
T 1vjh_A 119 NFKE 122 (122)
T ss_dssp HC--
T ss_pred hCCC
Confidence 9996
No 14
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=99.85 E-value=8.2e-21 Score=133.75 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=63.5
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCC-CceEEEEEEEEEeCCCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGE-HSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~-g~s~v~W~~~ye~~~~~~ 80 (106)
|++||||.|+|..+++..+++|||+++|+++|+++|+|++|++ ++++|+++|+|.|.++ ++|.++|+++|++...+.
T Consensus 97 g~vGsVR~lt~~~G~p~~~vkErL~~lDde~~~~sYsIieG~l--pv~~Y~sti~V~p~~~g~~t~V~Wt~~fes~~~D~ 174 (208)
T 3jrs_A 97 MRVGCTRDVNVISGLPANTSRERLDLLDDDRRVTGFSITGGEH--RLRNYKSVTTVHRFEKEEEEERIWTVVLESYVVDV 174 (208)
T ss_dssp CSTTCEEEEEECTTSSCCEEEEEEEEEETTTTEEEEEEEESSS--SCTTCEEEEEEEEEEC-----CEEEEEEEEEEEEC
T ss_pred CCCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEEEeeCCc--ceeeEEEEEEEEEccCCCccEEEEEEEEEEccCCC
Confidence 5899999999985545579999999999999999999999987 4789999999999754 489999999999644443
Q ss_pred C
Q 034001 81 P 81 (106)
Q Consensus 81 ~ 81 (106)
|
T Consensus 175 p 175 (208)
T 3jrs_A 175 P 175 (208)
T ss_dssp C
T ss_pred C
Confidence 3
No 15
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=99.84 E-value=1.5e-20 Score=130.10 Aligned_cols=76 Identities=14% Similarity=0.203 Sum_probs=66.1
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecC-CC--ceEEEEEEEEEeCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKG-EH--SCLARWTIKYEKKSE 78 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~-~g--~s~v~W~~~ye~~~~ 78 (106)
|++|+||.|+|..+.+..+++|||+++|+++|+++|+|++|++ +|++|+++|+|.|.+ +| +|+|+|+++|++..+
T Consensus 69 ggvGsvR~lt~~~G~p~~~vkErL~~~D~~~~~~sY~Iieg~l--p~~~y~ati~v~p~~~dG~~gt~V~Ws~~fd~~~g 146 (183)
T 3rt2_A 69 LEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGGDH--RLKNYSSTISLHSETIDGKTGTLAIESFVVDVPEG 146 (183)
T ss_dssp CCTTCEEEEEECCSSTTCEEEEEEEEEETTTTEEEEEEEEESC--SCTTCEEEEEEEEEEETTEEEEEEEEEEEEECCTT
T ss_pred CCCCcEEEEEeCCCCccceEEEEEEEEECCCCEEEEEEecCCc--ceeEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCC
Confidence 5899999999983324468999999999999999999999987 589999999999986 65 699999999996544
Q ss_pred C
Q 034001 79 D 79 (106)
Q Consensus 79 ~ 79 (106)
.
T Consensus 147 ~ 147 (183)
T 3rt2_A 147 N 147 (183)
T ss_dssp C
T ss_pred C
Confidence 3
No 16
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=99.83 E-value=2.4e-19 Score=124.77 Aligned_cols=76 Identities=18% Similarity=0.224 Sum_probs=60.9
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEe--cCCCceEEEEEEEEEeCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIP--KGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p--~~~g~s~v~W~~~ye~~~ 77 (106)
|++||||.|+|..+++..++||||+++|+++|+++|+|++|+++ ..|+++...+++.| .++++|+|+|+++|++..
T Consensus 77 g~vGsVR~~t~~~G~p~~~vkErL~~iD~~~~~~sY~iieG~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f~~p~ 155 (190)
T 3kl1_A 77 GDVGSVREVTVISGLPASTSTERLEFVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTVDIPE 155 (190)
T ss_dssp SSTTCEEEEEECSSSSCEEEEEEEEEEETTTTEEEEEEEEESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEEECCT
T ss_pred CCCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEEEEecCCccccEEEEEEEEecccccCCCCcEEEEEEEEEEcCC
Confidence 57999999999855555799999999999999999999999984 44555555555554 345589999999999543
No 17
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=99.81 E-value=2.7e-19 Score=126.17 Aligned_cols=71 Identities=17% Similarity=0.238 Sum_probs=63.1
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKK 76 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~ 76 (106)
|++|+||.|+|..+.+..+++|||+++|+++|+++|+|++|++ +|++|+++|+|.|.++|+ ++|+++|+..
T Consensus 93 g~vGsVR~lt~~~G~p~~~vkErL~~lDd~~~~~sYsIieg~l--pv~~Y~sti~V~p~~~gg--V~Wt~~fes~ 163 (211)
T 3k3k_A 93 MRVGCTRDVIVISGLPANTSTERLDILDDERRVTGFSIIGGEH--RLTNYKSVTTVHRFEKEN--RIWTVVLESY 163 (211)
T ss_dssp CCTTCEEEEEESSSSSCEEEEEEEEEEETTTTEEEEEEEEETT--GGGTCEEEEEEEEEEETT--EEEEEEEEEE
T ss_pred CCCCcEEEEEecCCCccceEEEEEEEEeccCCEEEEEEeecCc--ceeEEEEEEEEEECCCCC--EEEEEEEEEe
Confidence 4789999999984445579999999999999999999999987 589999999999987765 9999999953
No 18
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=99.78 E-value=3.1e-18 Score=120.31 Aligned_cols=75 Identities=16% Similarity=0.186 Sum_probs=65.0
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecC-CC--ceEEEEEEEEEeCCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKG-EH--SCLARWTIKYEKKSE 78 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~-~g--~s~v~W~~~ye~~~~ 78 (106)
|++|+||.|+|..+.+..+++|||+++|+++|+++|+|++|++ +|++|+++|+|.|.+ +| +|++.|+..+++..+
T Consensus 93 g~vGsVR~vt~~~G~p~~~vkErL~~lDde~~~~sYsIieG~l--pv~~Y~ati~V~p~~~dG~~~T~v~ws~~~D~p~g 170 (205)
T 3oqu_A 93 PEIGSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDH--RLKNYSSILTVHPEIIEGRAGTMVIESFVVDVPQG 170 (205)
T ss_dssp CCTTCEEEEEECTTSSCSEEEEEEEEEETTTTEEEEEEEEESS--SCTTCEEEEEEEEECCCC-CEEEEEEEEEEECCTT
T ss_pred CCCCcEEEEEEcCCCccceEEEEEEEEECCCCEEEEEEEecCc--ceeEEEEEEEEEEccCCCCceEEEEEEEeccCCCC
Confidence 5799999999983334578999999999999999999999987 589999999999988 45 699999999875443
No 19
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=99.77 E-value=1.2e-17 Score=111.22 Aligned_cols=67 Identities=19% Similarity=0.374 Sum_probs=61.1
Q ss_pred CeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEe-cCCCceEEEEEEEEEeC
Q 034001 5 GTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIP-KGEHSCLARWTIKYEKK 76 (106)
Q Consensus 5 Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p-~~~g~s~v~W~~~ye~~ 76 (106)
|+||.++|. +| ..++|||+++|+++++++|++++|++ ++++|.++++|.| .+++||+++|+++|++.
T Consensus 43 G~vR~~~~~-~G--~~~~Erl~~~D~~~~~~~y~iv~g~~--~~~~~~~~~~v~p~~~~~gt~v~w~~~~~p~ 110 (146)
T 3f08_A 43 GRVRHLANP-DG--ETIIERLEVFNDKERYYTYSIMNAPF--PVTNYLSTIQVKEGTESNTSLVEWSGTFTPV 110 (146)
T ss_dssp GTEEEEECT-TS--CEEEEEEEEEETTTTEEEEEEEECSS--SEEEEEEEEEEEECSSTTCEEEEEEEEEEES
T ss_pred CeEEEEEeC-CC--CEEEEEEEEEeCCCCEEEEEEecCCC--ceeEEEEEEEEEEecCCCcEEEEEEEEEEeC
Confidence 999999997 66 58999999999999999999999976 4899999999999 56779999999999983
No 20
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=99.75 E-value=2.9e-17 Score=111.14 Aligned_cols=69 Identities=12% Similarity=0.204 Sum_probs=61.1
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC---ceeEEEEEEEEEecC-CCceEEEEEEEEEeCC
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD---KYNSFYVTVQAIPKG-EHSCLARWTIKYEKKS 77 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~---~~~~~~~t~~v~p~~-~g~s~v~W~~~ye~~~ 77 (106)
|++|+||.+ +| .++|||+++|+++++++|++++|++.. .+++|.++++|.|.+ ++||+|+|+++|++.+
T Consensus 46 ~~vGsvR~~----gg---~v~Erl~~~D~~~~~~sY~ii~g~l~~~~~~~~~y~~~~~v~p~~~~ggt~V~w~~~~~~~~ 118 (160)
T 3p51_A 46 YSVGARRLL----NG---EFLDTLIAYSEIERRIMYSMDEGPSPVSSGEIYNYVGNLHLLPVTIDDTTFVEWSGSWESAS 118 (160)
T ss_dssp TCTTCEEEE----TT---TEEEEEEEEETTTTEEEEEEEECSTTSSTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESC
T ss_pred CCCCCEEEE----CC---EEEEEEEEEcCCCcEEEEEEecCCCcccccceeEEEEEEEEEEecCCCCEEEEEEEEEEeCH
Confidence 378999998 33 689999999999999999999998752 299999999999987 6799999999999864
No 21
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=99.72 E-value=2.5e-19 Score=127.26 Aligned_cols=72 Identities=11% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeC
Q 034001 3 KPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKK 76 (106)
Q Consensus 3 ~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~ 76 (106)
++||||.|+|..+.++.++||||+++|+++|+++|+|++|++ ++++|.++++|.|.++|||+++|+..|++.
T Consensus 122 gvGSVR~lt~~~G~p~~~vkErLe~iDde~~~~sYsIieG~~--p~~~Y~stikV~p~~dGGT~V~Ws~~f~pp 193 (223)
T 3qrz_A 122 HVGDLREVMVVSGLPAVSSTERLEILDEERHVISFSVVGGDH--RLKNYRSVTTLHASDDEGTVVVESYIVDVP 193 (223)
T ss_dssp CSSCCCCCCC---CCCCCCCCCCSEEETTTTEEECCCTTCSS--SCCCCCCEEEC--------CCEEEEEECSC
T ss_pred CCCeEEEEEecCCCccceEEEEEEEEeccCCEEEEEEEeCCC--ccccEEEEEEEEEcCCCCEEEEEEEEEEcC
Confidence 899999999984444568999999999999999999999987 467788889999988889999999999953
No 22
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=99.72 E-value=1.5e-16 Score=110.44 Aligned_cols=71 Identities=17% Similarity=0.181 Sum_probs=58.6
Q ss_pred CCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecC---CC-----ceEEEEEEEEEe
Q 034001 4 PGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKG---EH-----SCLARWTIKYEK 75 (106)
Q Consensus 4 ~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~---~g-----~s~v~W~~~ye~ 75 (106)
+||||.|+|..+.+..+++|||+.+|+++|+++|+|++|++ ++++|+++++|.|.+ +| +|++.|+..+++
T Consensus 79 vGsVR~ltl~~G~P~~~i~ErL~~lDde~~~~sY~Iieg~~--pv~nY~StitV~~~~~~~~G~~~~~~T~v~es~~~D~ 156 (189)
T 3oji_A 79 VGTIREVSVVSGLPASTSVEILEVLDEEKRILSFRVLGGEH--RLNNYRSVTSVNEFVVLEKDKKKRVYSVVLESYIVDI 156 (189)
T ss_dssp TTCEEEEEECSSSSBSEEEEEEEEEETTTTEEEEEEEECSB--SSCSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred CCcEEEEEecCCCcCceEEEEEEEEeccCCEEEEEEEecCC--ccccEEEEEEEEeccccCCCccccCcEEEEEeEecCC
Confidence 89999999984434468999999999999999999999997 478999999999853 33 577777777764
Q ss_pred C
Q 034001 76 K 76 (106)
Q Consensus 76 ~ 76 (106)
.
T Consensus 157 P 157 (189)
T 3oji_A 157 P 157 (189)
T ss_dssp C
T ss_pred C
Confidence 3
No 23
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=99.55 E-value=6.3e-14 Score=92.42 Aligned_cols=69 Identities=14% Similarity=0.327 Sum_probs=61.5
Q ss_pred CCCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEe
Q 034001 2 GKPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEK 75 (106)
Q Consensus 2 g~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~ 75 (106)
|++|++|.+++. +| ..++|||+.+|+++++++|++++|++ ++++|.++++|.|.++++|+++|+++|++
T Consensus 45 ~~~G~~r~~~~~-~G--~~~~e~i~~~d~~~~~~~~~~~~g~~--~~~~~~~~~~l~~~~~~gt~v~w~~~f~~ 113 (151)
T 2le1_A 45 HTPGAERVFGAG-TE--EELVERLVERDESARRLVYTMPDPPF--PITNHRAVLEVVPRDDRHCTVVWTAMFDC 113 (151)
T ss_dssp TSTTCEEEESSS-SS--SCEEEEEEEEETTTTEEEEEEEECSS--SEEEEEEEEEEEESSSSCEEEEEEEEEEE
T ss_pred CCCCeEEEEEeC-CC--CEEEEEEEEEeCCCCEEEEEEecCCC--CceeEEEEEEEEECCCCcEEEEEEEEEEe
Confidence 468999999996 55 47999999999999999999999875 48999999999997667899999999996
No 24
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=98.39 E-value=3.7e-05 Score=48.24 Aligned_cols=67 Identities=27% Similarity=0.240 Sum_probs=50.3
Q ss_pred CeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCC
Q 034001 5 GTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 5 Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~ 77 (106)
|....+++..+|....+..++. .++.++++.|++++|++ +.+.++++|.|.++| |.++|+++|+..+
T Consensus 46 g~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~~g~~----~~~~~~~~~~~~~~g-T~v~~~~~~~~~~ 112 (147)
T 2d4r_A 46 RTRSRWVAVAMGKKVRWLEEEE-WDDENLRNRFFSPEGDF----DRYEGTWVFLPEGEG-TRVVLTLTYELTI 112 (147)
T ss_dssp EEEEEEEEEETTEEEEEEEEEE-EETTTTEEEEEEEEESC----SEEEEEEEEEECSSS-EEEEEEEEEECCC
T ss_pred ccEEEEEEEeCCceEEEEEEEE-EcCCCcEEEEEeccCCh----hheEEEEEEEECCCC-cEEEEEEEEecCC
Confidence 5566676654453344566655 45778999999988864 567889999998775 9999999999764
No 25
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=98.35 E-value=2.8e-05 Score=51.91 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=46.3
Q ss_pred CCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCC
Q 034001 15 DGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE 78 (106)
Q Consensus 15 ~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~ 78 (106)
+|....+..+. .+|+..++|.|++++.+ +++++.++++|.|.++ ||+|+|..+|+..+.
T Consensus 59 ~G~~~~~ts~~-~~d~~~~~I~~~~~~~g---Pf~~l~g~W~f~p~~~-gt~V~~~~df~~~~~ 117 (159)
T 3tl1_A 59 DGKVWSWVSER-VADPVTRTVRAQRVETG---PFQYMNIVWEYAETAE-GTVMRWTQDFAMKPD 117 (159)
T ss_dssp TSCCCEEEEEE-EEETTTTEEEEEESSCT---TEEEEEEEEEEEEETT-EEEEEEEEEEEECTT
T ss_pred CceEEEEEEEE-EEcCCCCEEEEEEccCC---ChhhccCEEEEEECCC-CEEEEEEEEEEecCC
Confidence 45444454553 48999999999987433 3789999999999877 799999999998755
No 26
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=98.29 E-value=2.7e-05 Score=52.00 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=51.4
Q ss_pred EEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCC
Q 034001 10 WTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSED 79 (106)
Q Consensus 10 ~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~ 79 (106)
+....+|....+..++. +|+..++|.|++++++. +++.+.++++|.|.++++|+|+|+.+|+..+..
T Consensus 54 ~~~~~~G~~~~~~s~~~-~~~~~~~i~~~~~~~~g--pf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~~~ 120 (172)
T 3tfz_A 54 LHVDVAGEINTWTSRRD-LDPARRVIAYRQLETAP--IVGHMSGEWRAFTLDAERTQLVLTHDFVTRAAG 120 (172)
T ss_dssp EEEEETTEEEEEEEEEE-EETTTTEEEEEEEECCT--TEEEEEEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred EEEecCCEEEEEEEEEE-EeCCCCEEEEEEeeCCC--ChhhcEEEEEEEECCCCcEEEEEEEEEEEcChh
Confidence 34444564445566644 88889999999997543 478999999999987779999999999976543
No 27
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=98.28 E-value=3.4e-05 Score=52.00 Aligned_cols=59 Identities=10% Similarity=0.055 Sum_probs=45.4
Q ss_pred CCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCC
Q 034001 15 DGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE 78 (106)
Q Consensus 15 ~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~ 78 (106)
+|....+..+. .+|+..++|.|+.++++ ++++|.++++|.|.++| |+|+|..+|+..+.
T Consensus 59 ~G~~~~~ts~~-~~d~~~~~I~~~~l~~g---Pf~~~~g~W~f~p~~~g-t~V~~~~df~~~~~ 117 (169)
T 3tvq_A 59 NGRVWEWVSHR-VPDKGSRTVRAHRVETG---PFAYMNLHWTYRAVAGG-TEMRWVQEFDMKPG 117 (169)
T ss_dssp TSCCCEEEEEE-EEEGGGTEEEEEESSCT---TEEEEEEEEEEEEETTE-EEEEEEEEEEECTT
T ss_pred CCeEEEEEEEE-EEcCCCcEEEEEEcCCC---ChhheeeEEEEEECCCC-EEEEEEEEEEecCC
Confidence 44334444442 48999999999976543 37899999999999876 99999999998654
No 28
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=97.94 E-value=0.00021 Score=47.17 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=44.7
Q ss_pred EEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCC
Q 034001 20 IAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 20 ~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~ 77 (106)
.+.-|++ +|++.+++.+++++|++ .++..+++++.|.++|+|.|+|.++|+...
T Consensus 67 ~~~s~~~-~~~~~~~I~~~~~~g~~---~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~ 120 (161)
T 3p9v_A 67 VYACTYH-ADKEAGKITWSPIKGEG---NGVVSGSWTLSAKGDNATAVKFQTSAELTV 120 (161)
T ss_dssp EEEEEEE-EETTTTEEEEEECTTST---TEEEEEEEEEEESSSSCEEEEEEEEEEEEE
T ss_pred EEEEEEE-EcCCCCEEEEEEecCcc---ceeEEEEEEEEECCCCeEEEEEEEEEEEcC
Confidence 5555644 77878999999998875 367889999999988789999999999864
No 29
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=97.77 E-value=8.1e-05 Score=48.09 Aligned_cols=65 Identities=12% Similarity=0.169 Sum_probs=49.2
Q ss_pred eEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeC
Q 034001 6 TVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKK 76 (106)
Q Consensus 6 svr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~ 76 (106)
....++.+.++-...+.-|+. +|+.++++.++.++|+ ++.+.+++++.|.++| |.+++.++|+..
T Consensus 51 ~~~~~~~~~~~~~~~~~~~v~-~~~~~~~i~~~~~~G~----f~~~~g~w~f~~~~~g-t~v~~~~~~~~~ 115 (148)
T 1t17_A 51 VDAEAQVGFSFLREKFATRVR-RDKDARSIDVSLLYGP----FKRLNNGWRFMPEGDA-TRVEFVIEFAFK 115 (148)
T ss_dssp EEEEEECSTTSSCCEEEEEEE-EETTTCEEEEEESSTT----SSCEEEEEEEEEETTE-EEEEEEEEECCS
T ss_pred EEEEEEEEecceeEEEEEEEE-EcCCCcEEEEEECCCC----hhccEEEEEEEECCCC-eEEEEEEEEEEC
Confidence 344455544443455677777 5777789999999985 4678899999998776 999999999965
No 30
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=97.73 E-value=0.00083 Score=44.41 Aligned_cols=63 Identities=6% Similarity=0.041 Sum_probs=47.4
Q ss_pred CCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEE
Q 034001 3 KPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYE 74 (106)
Q Consensus 3 ~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye 74 (106)
++|+.+.++.. ++ ..+.++|+++|+..+ ++|+..-+ ...+..+..|.|.++++|+++|+.+|.
T Consensus 60 ~~G~~~~~~~~-~~--~~~~~~v~~~~p~~~-~~~~~~~p-----~~~~~~~h~l~p~~~ggTrvt~~~~~~ 122 (155)
T 3ijt_A 60 TTGQKGKMKME-DM--PELAFTLVEVRENQC-FSDLTATP-----FGNVLFEHEILENPDGTISLRHSVSLT 122 (155)
T ss_dssp STTCEEEEEET-TS--CCEEEEECCCBTTTE-EEEEEEET-----TEEEEEEEEEEECTTSCEEEEEEEEES
T ss_pred CCCCEEEEEeC-CC--CcEEEEEEEEeCCcE-EEEEEecC-----CeEEEEEEEEEEcCCCcEEEEEEEEEE
Confidence 57888888876 55 367789999987765 88865322 235667778999877899999999994
No 31
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=96.77 E-value=0.047 Score=35.07 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=35.5
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCC
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE 78 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~ 78 (106)
++..+|+. +++.++....+. ........+++|.|.++++|+++|+++++..+.
T Consensus 66 ~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~ 118 (162)
T 2pcs_A 66 EVTDIKPP-YHYKLLVNGEGG-PGFVNAEGVIDLTPINDECTQLTYTYSAEVGGK 118 (162)
T ss_dssp EEEEEETT-TEEEEEEEEEET-TEEEEEEEEEEEEESSSSEEEEEEEEEEEEESG
T ss_pred EEEecCCC-cEEEEEEEecCC-CccEEEEEEEEEEecCCCcEEEEEEEEEEECCC
Confidence 55666664 466666532111 123467889999996566899999999997654
No 32
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=96.67 E-value=0.059 Score=34.78 Aligned_cols=64 Identities=13% Similarity=0.103 Sum_probs=44.6
Q ss_pred EEEEec-CC-eeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEec-CCCceEEEEEEEEEeCC
Q 034001 9 TWTYKH-DG-VTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPK-GEHSCLARWTIKYEKKS 77 (106)
Q Consensus 9 ~~~~~~-~g-~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~-~~g~s~v~W~~~ye~~~ 77 (106)
.|+... .| ....+.-++..+ ...+.+.|+.++|+. ..+.+++++.|. ++++|+++++++|+..+
T Consensus 48 ~~~~~~~~G~~~~~~~~~v~e~-~p~~~i~~~~~~g~~----~~~~g~~~F~~~~~~~gT~V~~~~~~~~~~ 114 (155)
T 3ggn_A 48 RWTVEAPAPLGTVSWEAELTAD-EPGKRIAWRSLPGAR----IENSGEVLFRPAPGARGTEVVVRLTYRPPG 114 (155)
T ss_dssp EEEEECCTTTCEEEEEEEEEEE-ETTTEEEEEECTTCS----SCEEEEEEEEECSSSSCEEEEEEEEEC---
T ss_pred EEEEEecCCcceEEEEEEEEEe-cCCCEEEEEECCCCC----cceEEEEEEEECCCCCceEEEEEEEEECCC
Confidence 444442 25 455677777765 456789999988863 356788899998 45689999999999754
No 33
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=95.97 E-value=0.15 Score=32.22 Aligned_cols=51 Identities=14% Similarity=0.219 Sum_probs=33.9
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCC
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~ 77 (106)
++..+++ .+++.|+....+....++ +..++++.|.+ ++|+++|+.+|+..+
T Consensus 75 ~~~~~~~-~~~i~~~~~~~~~~~~~~-~~~~~~l~~~~-~gT~v~~~~~~~~~g 125 (157)
T 2ns9_A 75 SFEDLEK-PSKATVKGSGRGAGSTLD-FTLRFAVEPSG-GGSRVSWVFEGNVGG 125 (157)
T ss_dssp EEEEEET-TTEEEEEEEEECSSEEEE-EEEEEEEEEET-TEEEEEEEEEEEEEE
T ss_pred EEEecCC-CcEEEEEEEecCCCccEE-EEEEEEEEeCC-CcEEEEEEEEEEECc
Confidence 5556665 457777643211111233 67899999986 689999999998654
No 34
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=95.53 E-value=0.22 Score=30.84 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=53.0
Q ss_pred CCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeC--ccc-CceeEEEEEEEEEecCCCceEEEEEEEEEeCCCC
Q 034001 3 KPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEG--HLL-DKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSED 79 (106)
Q Consensus 3 ~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg--~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~ 79 (106)
.+|....+.+..+|....+.-++.++++ .+.+.|+.... ++. ..-.....+++|.|.++ +|+++|+....+..
T Consensus 44 ~~G~~~~~~~~~~g~~~~~~~~v~~~~p-~~~l~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~~~-- 119 (146)
T 2leq_A 44 KEGSQIVWKGEWKGKAYEDKGTILQFNE-RSILQYSHFSPLTGKPDLPENYHVVTITLTALKK-GVEVELTQDNNETE-- 119 (146)
T ss_dssp STTCEEEEEEEETTEEEEEEEEEEEEET-TTEEEEECBCGGGCCCSCGGGSCEEEEEEEECSS-CEEEEEEEEEESSH--
T ss_pred CCCCEEEEEecCCCceecccEEEEEEcC-CCEEEEEEccCccCCCCCCCCceEEEEEEEEcCC-CeEEEEEEecCCch--
Confidence 3566666666534433457788888877 56788876432 110 01124567888999754 69999887654211
Q ss_pred CCChhhHHHHHHHHHHHHHhcC
Q 034001 80 VPDPQGIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 80 ~~~p~~~~~~~~~~~k~ie~yl 101 (106)
............++..|.+||
T Consensus 120 -~~~~~~~~gw~~~l~~Lk~~l 140 (146)
T 2leq_A 120 -KEQKHSEDNWNTMLEGLKKFL 140 (146)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhHhhHHhhHHHHHHHHHHHH
Confidence 011222233445555665554
No 35
>1xn6_A Hypothetical protein BC4709; structural genomics, protein structure initiative, PSI, NESG target protein BCR68, alpha + beta; NMR {Bacillus cereus} SCOP: d.129.3.5
Probab=95.03 E-value=0.081 Score=33.34 Aligned_cols=61 Identities=16% Similarity=0.066 Sum_probs=40.7
Q ss_pred CCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEe
Q 034001 3 KPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEK 75 (106)
Q Consensus 3 ~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~ 75 (106)
.+|....+.+ ++|. +.-++.++++ .+.+.|+...+ ....+++|.|.++|+|+++++.....
T Consensus 45 ~~G~~~~~~~-~~g~---~~~~v~e~~p-~~~l~~~~~~~-------~~~~~~~l~~~~~g~T~l~~~~~~~~ 105 (143)
T 1xn6_A 45 EVGHEFHVQS-PFGP---SPCKVLEIDE-PNHLSFSWDTD-------GWVVSFDLKDLGDNKTEFTLIHGGWK 105 (143)
T ss_dssp CTTCEECBCC-TTCC---CCEEEEEEET-TTEEEEEETTT-------TEEEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCEEEEEE-cCCC---ceEEEEEEeC-CCEEEEEEeCC-------CEEEEEEEEECCCCcEEEEEEEEccC
Confidence 3565555555 3442 4667888887 56788886433 34678888898766899998877444
No 36
>1z94_A Conserved hypothetical protein; NESG, CV1439, structural genomics, PSI structure initiative; 2.10A {Chromobacterium violaceum} SCOP: d.129.3.5
Probab=94.30 E-value=0.53 Score=29.15 Aligned_cols=95 Identities=9% Similarity=-0.031 Sum_probs=56.7
Q ss_pred CCCeEEEEEEe--cCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 3 KPGTVITWTYK--HDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 3 ~~Gsvr~~~~~--~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
.+|...++.+. ++|......-++.++++ .+.+.|+...++- ..-.....+++|.|.++ +|+++|+..+.+..
T Consensus 47 ~~Gg~~~~~~~~~~~g~~~~~~~~v~~~~p-~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~-gT~l~~~~~~~~~~--- 120 (147)
T 1z94_A 47 RVGGAYKMEFLAFASGQKHAFGGRYLELVP-GERIRYTDRFDDA-GLPGDMITTITLAPLSC-GADLSIVQEGIPDA--- 120 (147)
T ss_dssp STTCEEEEEEEETTTCCEEEEEEEEEEEET-TTEEEEEEEESCC-C---CEEEEEEEEEETT-EEEEEEEEECCCTT---
T ss_pred CCCcEEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEEEEeCC-CCCCcEEEEEEEEecCC-CEEEEEEEEcCCch---
Confidence 35666566554 34433456778888876 6678888765421 01113467888889754 79999998875321
Q ss_pred CChhhHHHHHHHHHHHHHhcCCC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHHPP 103 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl~~ 103 (106)
............++..|.++|-+
T Consensus 121 ~~~~~~~~gw~~~L~~L~~~le~ 143 (147)
T 1z94_A 121 IPPENCYLGWQQSLKQLAALVEP 143 (147)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 12233344455666677766643
No 37
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=93.77 E-value=0.87 Score=29.73 Aligned_cols=69 Identities=9% Similarity=-0.024 Sum_probs=43.3
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEE
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKY 73 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~y 73 (106)
+|..-.+.+. ++|......-++.++++ .+++.|+..-++....-.....++.|.|.++++|+++|+..|
T Consensus 67 ~Gg~~~~~~~~~~G~~~~~~~~v~e~~p-~~rl~~~~~~~~~~~~~~~~~v~~~l~~~~~ggT~lt~~~~~ 136 (178)
T 1xuv_A 67 NGGSWQYIQKDPEGNEYAFHGVNHDVTE-PERIISTFEFEGLPEKGHVILDTARFEALPGDRTKLTSHSVF 136 (178)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEEEET-TTEEEEEEEETTSSSSCCCEEEEEEEEEETTTEEEEEEEEEC
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEeC-CCEEEEEEEecCCCCCCCcEEEEEEEEEcCCCCEEEEEEEEe
Confidence 5555555543 34533446678888876 566778765432111012456788999987678999998885
No 38
>2il5_A Hypothetical protein; structural genomics, APC23650, PSI-2, structure initiative; 2.30A {Staphylococcus aureus subsp} SCOP: d.129.3.5
Probab=92.65 E-value=1.3 Score=28.46 Aligned_cols=69 Identities=9% Similarity=0.044 Sum_probs=43.3
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEe
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEK 75 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~ 75 (106)
+|..-.+.+. ++|......-++.++++ .+++.|+...++... .....++.+.|.++|+|+++++.....
T Consensus 59 ~Gg~~~~~~~~~~G~~~~~~~~v~e~~p-~~rl~~~~~~~~~~~--~~~~~~~~l~~~~~g~T~l~~~~~~~~ 128 (171)
T 2il5_A 59 EGGKYRIVDQQRNGKVNVIEGIYESLVM-DEYVKMTIGMPGLSE--TQDVIEVEFFERETGGTQMLFYYRSLV 128 (171)
T ss_dssp TTCEEEEEEECGGGCEEEEEEEEEEEET-TTEEEEEESCC--CC--CCEEEEEEEEECSSSSEEEEEEEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEEEecCCCC--CcEEEEEEEEECCCCCEEEEEEEEecc
Confidence 5555555554 34432345667888865 667888875433221 135778899998776899999886443
No 39
>2lcg_A Uncharacterized protein; start domain, structural genomics, northeast structural GENO consortium, NESG, unknown function, AHSA1; NMR {Ralstonia metallidurans}
Probab=91.95 E-value=1.4 Score=27.43 Aligned_cols=84 Identities=8% Similarity=0.032 Sum_probs=48.7
Q ss_pred CCCeEEEEEEe-cCCe-eeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 3 KPGTVITWTYK-HDGV-TEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 3 ~~Gsvr~~~~~-~~g~-~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
.+|....+.+. ++|. ...+.-++.++++ .+.+.|+. .| ...++.+.|.++ +|+++++..+. . .
T Consensus 46 ~~Gg~~~~~~~~~~g~~~~~~~~~v~~~~p-~~~l~~~~-~g--------~~~~~~l~~~~~-gT~l~~~~~~~--~--~ 110 (142)
T 2lcg_A 46 REGGAFSSRMEAKDGSMGFDFAGTYTKVVE-NKRIEYAF-GD--------RTAKVEFLEAPQ-GVTVRVSFVAE--T--E 110 (142)
T ss_dssp STTCEEEEEEEETTSSCEEEEEEEEEEEET-TTEEEEEE-TT--------EEEEEEEEEETT-EEEEEEEEECC--S--S
T ss_pred ccCCEEEEEEEcCCCCceeeeEEEEEEEcC-CCEEEEEc-CC--------CEEEEEEEEcCC-CEEEEEEEecC--C--H
Confidence 35666555554 2342 2446677888876 56788886 21 467888889764 79999886652 1 1
Q ss_pred CChhhHHHHHHHHHHHHHhcC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl 101 (106)
...+...+....++..|.++|
T Consensus 111 ~~~~~~~~Gw~~~L~~L~~~l 131 (142)
T 2lcg_A 111 YPVEQQQQGWQAILNNFKRHV 131 (142)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 222333333444455555544
No 40
>3put_A Hypothetical conserved protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.83A {Rhizobium etli cfn 42} PDB: 3otl_A*
Probab=88.57 E-value=3.5 Score=26.58 Aligned_cols=93 Identities=13% Similarity=-0.008 Sum_probs=51.7
Q ss_pred CCeEEEEEE-ecCCeeeEEEEEEEEEeCCCCEEEEEEEe--CcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 4 PGTVITWTY-KHDGVTEIAKEIIEEIDDEKNSTTFKVIE--GHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 4 ~Gsvr~~~~-~~~g~~~~~kErl~~~D~~~~~~~y~iie--g~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
+|..-.+.+ .++|....+.=++.++++ .+++.|+..- .+. ....-..++.|.|.+ ++|+++.+-.....+..
T Consensus 55 ~GG~~~~~~~~~~G~~~~~~g~v~ev~p-~~rlv~t~~~~~~~~--~~~~s~vt~~l~~~~-~gT~ltl~~~~~~~~~~- 129 (166)
T 3put_A 55 PGGTERNYTADTDGLLHAYDARYIDIVP-DTRIIYAYEMKLGQT--RISASLVTVAFDVEP-SGTRMVFTEQVVFLDGY- 129 (166)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEEEET-TTEEEEEEEEEETTE--EEEEEEEEEEEEECS-SSEEEEEEEEEEEETTC-
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcC-CcEEEEEEEecCCCC--CCCceEEEEEEEECC-CCEEEEEEEEecCccch-
Confidence 454444544 235543346678888876 4556666531 111 123446788899976 57999988876533311
Q ss_pred CChhhHHHHHHHHHHHHHhcC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl 101 (106)
.......+.-..++..|.+||
T Consensus 130 ~~~~~~~~GW~~~L~~L~~~l 150 (166)
T 3put_A 130 GDNGARLQGTEIGLDNLELFL 150 (166)
T ss_dssp CCTTHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 122333344455556666655
No 41
>3rd6_A MLL3558 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.80A {Mesorhizobium loti}
Probab=86.72 E-value=4.5 Score=25.79 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=53.5
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEe--CcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIE--GHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iie--g~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
+|..-.+.+. ++|....+.=++.++++. +++.|+..- .+. ....-..+++|.|.++ +|+++++...-..+. .
T Consensus 54 ~Gg~~~~~~~~~~G~~~~~~g~v~e~~p~-~rl~~~~~~~~~~~--~~~~s~v~~~l~~~~~-gT~lt~~~~~~~~~~-~ 128 (161)
T 3rd6_A 54 VGGGEVSRFSYGGGPEVRLDAQFQDIVPD-QRIVFSYRMAIGPQ--PMSASLTTVELTPSGD-GTRLTYTEQGAFFDG-V 128 (161)
T ss_dssp TTCEEEEEECSTTSCCEEEEEEEEEEETT-TEEEEEEEEEETTE--EEEEEEEEEEEEEETT-EEEEEEEEEEEEETT-C
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcCC-CEEEEEEEecCCCC--CCCceEEEEEEEECCC-CEEEEEEEEecCcch-h
Confidence 4555555553 345333466678888764 456676531 111 1234567888989765 699999988653221 1
Q ss_pred CChhhHHHHHHHHHHHHHhcCC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHHP 102 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl~ 102 (106)
+......+.-..++..|++||.
T Consensus 129 ~~~~~~~~GW~~~L~~L~~~le 150 (161)
T 3rd6_A 129 DSAKGREEGTRGLLEALAAELQ 150 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHHHHHHHHHHHh
Confidence 2234444555566677777664
No 42
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=86.47 E-value=4.3 Score=25.36 Aligned_cols=85 Identities=9% Similarity=0.048 Sum_probs=46.3
Q ss_pred CCeEEEEEEe-cCCe-eeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCC
Q 034001 4 PGTVITWTYK-HDGV-TEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVP 81 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~-~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~ 81 (106)
+|..-.+.+. ++|. ...+.-++.++++ .+++.|+. .| ....++.|.|.+ ++|+++.+..+ ....
T Consensus 48 ~Gg~~~~~~~~~~G~~~~~~~g~v~e~~p-~~~l~~~~-~g-------~~~v~~~l~~~~-~gT~l~~~~~~----~~~~ 113 (144)
T 2l8o_A 48 AGGTFTTTMAAKDGSMSFDFGGVYDQVKT-NDLIEYTI-GD-------GRKVRIVFTHTG-DTTNIVESFDP----EETN 113 (144)
T ss_dssp TTCEEEEEEECTTSSCEEEEEEEEEEEET-TTEEEEEE-TT-------CCEEEEEEEECS-SSEEEEEEECC----CSSS
T ss_pred CCCEEEEEEECCCCCceeeeeEEEEEEeC-CCEEEEEe-CC-------CeEEEEEEEEcC-CCEEEEEEEeC----CCHH
Confidence 4444444443 3443 2335567787865 56678885 33 136788888875 47988877654 1112
Q ss_pred ChhhHHHHHHHHHHHHHhcCC
Q 034001 82 DPQGIVNLAIEMTKGIEAHHP 102 (106)
Q Consensus 82 ~p~~~~~~~~~~~k~ie~yl~ 102 (106)
..+...+....++..|++||-
T Consensus 114 ~~~~~~~Gw~~~L~~L~~~le 134 (144)
T 2l8o_A 114 PRELQQSGWQAILNSFKSYTE 134 (144)
T ss_dssp CHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 223333334445555555543
No 43
>3q64_A MLL3774 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.50A {Mesorhizobium loti}
Probab=84.42 E-value=6 Score=25.19 Aligned_cols=93 Identities=13% Similarity=0.033 Sum_probs=51.5
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEe--CcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIE--GHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iie--g~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
+|..-.+.+. ++|....+.=++.++++ .+++.|+..- .+. ....-..++.|.|.++ +|+++++-..-..+. .
T Consensus 55 ~Gg~~~~~~~~~~G~~~~~~g~v~e~~p-~~rl~~~~~~~~~~~--~~~~s~v~~~l~~~~~-gT~lt~~~~~~~~~~-~ 129 (162)
T 3q64_A 55 VGGKEVNAGGPKDGPIHVYTATYQDIVP-DQRIVYSYDMLFGET--RISVSLATIQLFAEGE-GTRLVLTEQGAFLDG-H 129 (162)
T ss_dssp TTCEEEEEECCTTSCCEEEEEEEEEEET-TTEEEEEEEEEETTE--EEEEEEEEEEEEEETT-EEEEEEEEEEEEETT-S
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEEEecCCCC--CCCceEEEEEEEEcCC-CEEEEEEEEecCccc-h
Confidence 5655555553 34533456677888865 4556666531 111 1234567888999765 699999888643221 1
Q ss_pred CChhhHHHHHHHHHHHHHhcC
Q 034001 81 PDPQGIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 81 ~~p~~~~~~~~~~~k~ie~yl 101 (106)
+......+.-..++..|++||
T Consensus 130 ~~~~~~~~GW~~~L~~L~~~l 150 (162)
T 3q64_A 130 DTPSTREHGTGVLLDLLDAFL 150 (162)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 223333344444555555544
No 44
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=83.53 E-value=6.9 Score=25.25 Aligned_cols=95 Identities=16% Similarity=0.055 Sum_probs=52.8
Q ss_pred CCeEEEEEE-ecCCeeeEEEEEEEEEeCCCCEEEEEEEe----CcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCC
Q 034001 4 PGTVITWTY-KHDGVTEIAKEIIEEIDDEKNSTTFKVIE----GHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE 78 (106)
Q Consensus 4 ~Gsvr~~~~-~~~g~~~~~kErl~~~D~~~~~~~y~iie----g~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~ 78 (106)
+|..-.+.+ .++|....+.-++.++++ .+++.|+-.- |........-..+++|.|.+ ++|+++++..|..
T Consensus 58 ~GG~~~~~~~~~~G~~~~~~g~~~ev~p-~~rlv~t~~~~~~~g~p~~~~~~s~vt~~l~~~~-~gT~lt~~~~~~~--- 132 (168)
T 3uid_A 58 PGGRVTYFMTGPDGEKYAGYWEITAVDE-PHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHD-GGTRATYVGTYAS--- 132 (168)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEEEET-TTEEEEEEEEECTTSCBCSSCCCEEEEEEEEEET-TEEEEEEEEECSC---
T ss_pred CCcEEEEEEECCCCCEEeeEEEEEEEeC-CcEEEEEEeeccCCCCcCCCCCcEEEEEEEEECC-CCEEEEEEEecCC---
Confidence 444444444 245533346678888876 4556666532 21111112346788999975 5799988854321
Q ss_pred CCCChhh-----HHHHHHHHHHHHHhcCCCC
Q 034001 79 DVPDPQG-----IVNLAIEMTKGIEAHHPPK 104 (106)
Q Consensus 79 ~~~~p~~-----~~~~~~~~~k~ie~yl~~~ 104 (106)
.+..+. ..+.-..++..|++||.+.
T Consensus 133 -~~~~~~~~~~g~~~GW~~~L~~L~~~l~~~ 162 (168)
T 3uid_A 133 -AEALQQVLDMGVIEGASSAINQIDALLTAT 162 (168)
T ss_dssp -HHHHHHHHHTTHHHHHHHHHHHHHHHTCSC
T ss_pred -HHHHHHHHHhcHHHHHHHHHHHHHHHHHhh
Confidence 011111 2244567788899988764
No 45
>2lak_A AHSA1-like protein RHE_CH02687; NESG, structural genomics, northeast structural genomics CON PSI-biology, structure genomics, unknown function; NMR {Rhizobium etli}
Probab=82.25 E-value=1.4 Score=28.01 Aligned_cols=64 Identities=17% Similarity=0.119 Sum_probs=37.1
Q ss_pred CCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCccc-CceeEEEEEEEEEecCCCceEEEEEEE
Q 034001 4 PGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLL-DKYNSFYVTVQAIPKGEHSCLARWTIK 72 (106)
Q Consensus 4 ~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~-~~~~~~~~t~~v~p~~~g~s~v~W~~~ 72 (106)
+|....+++. ++. .+.-++.++++ .+.+.|+...++.. ..-.....+++|.|.++ +|+++|+..
T Consensus 48 ~Gg~~~~~~~-g~~--~~~~~v~e~~p-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-gT~l~~~~~ 112 (160)
T 2lak_A 48 PGGLYLVNVT-GAR--FARGSFREVVP-VHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGG-GTLLRLTHS 112 (160)
T ss_dssp TTCCEEECSS-TTC--CSSCCEEEEET-TTEEEECCCCCSSSCCCTTSCEEEEEEEECSS-SEEEEEEEE
T ss_pred CCCEEEEEEe-CCc--eEEEEEEEEcC-CCEEEEEEEecCCCCCCCCcEEEEEEEEECCC-CEEEEEEEe
Confidence 4444444443 321 34456777876 56778876433210 01124567888899764 799998876
No 46
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=82.17 E-value=5.3 Score=24.42 Aligned_cols=81 Identities=19% Similarity=0.108 Sum_probs=43.2
Q ss_pred CCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCCh
Q 034001 4 PGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDP 83 (106)
Q Consensus 4 ~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p 83 (106)
+|..-.+.+. +. .....=++.++++. +.+.|+...| ..++++.|.+ ++|+++++-..... .+.
T Consensus 40 ~Gg~~~~~~~-~~-~~~~~~~v~~~~p~-~~l~~~~~~g---------~~~~~l~~~~-~gT~l~~~~~~~~~----~~~ 102 (135)
T 3q6a_A 40 QGKTITLRYE-EY-DAELNINIERVEDN-QLIAFTWGAH---------PITIQFEESE-AGTVVTTTEKDFDT----QDV 102 (135)
T ss_dssp TTCEEEEECG-GG-TC-CEEEEEEEETT-TEEEEEETTE---------EEEEEEEEET-TEEEEEEEECCCCS----SCH
T ss_pred CCCEEEEEEc-Cc-CceEEEEEEEEcCC-CEEEEEEcCC---------eEEEEEEECC-CCEEEEEEEcCCCc----chH
Confidence 4555555553 11 12233356777654 6677776421 6788888964 57988877543211 111
Q ss_pred h---hHHHHHHHHHHHHHhcC
Q 034001 84 Q---GIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 84 ~---~~~~~~~~~~k~ie~yl 101 (106)
. ........++..|.+||
T Consensus 103 ~~~~~~~~GW~~~l~~L~~~l 123 (135)
T 3q6a_A 103 KQLLGQKEGWVYMLSCLKVYL 123 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhchhCHHHHHHHHHHHH
Confidence 1 12333445666666655
No 47
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=79.44 E-value=5.2 Score=26.04 Aligned_cols=29 Identities=3% Similarity=-0.019 Sum_probs=25.3
Q ss_pred eeEEEEEEEEEecCCCceEEEEEEEEEeCC
Q 034001 48 YNSFYVTVQAIPKGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 48 ~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~ 77 (106)
...+.+.+.+.| ++++|.+.+....++.+
T Consensus 123 ~~~~~~~~~i~p-~~~~t~vt~~~~~dp~G 151 (189)
T 3qsz_A 123 IPRAKGQWTLVP-DADGVDVTYQMHASPGG 151 (189)
T ss_dssp CCCEEEEEEEEE-CSSSEEEEEEEEECSCS
T ss_pred eeEeeEEEEEEE-CCCeEEEEEEEEeCCCC
Confidence 567888999999 77899999999999875
No 48
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=74.62 E-value=13 Score=23.56 Aligned_cols=67 Identities=7% Similarity=-0.022 Sum_probs=38.6
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCc---ccC-ceeEEEEEEEEEecCCCceEEEEEEEE
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGH---LLD-KYNSFYVTVQAIPKGEHSCLARWTIKY 73 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~---~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~y 73 (106)
+|..-.+.+. ++|... +.-++.++++ .+++.|+..-++ ... .......+++|.|.+ ++|+++.+..|
T Consensus 53 ~Gg~~~~~~~~~~G~~~-~~g~v~e~~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~gT~l~~~~~~ 124 (164)
T 2l9p_A 53 KGGSAFYAIQAPQMISY-TIAEYLQVDA-PYYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK-GKTTVTSTSTF 124 (164)
T ss_dssp TTEEEEEEEEETTEEEE-EEEEESCCBT-TTEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS-SSEEEEEEEEC
T ss_pred CCCEEEEEEECCCCCEE-EEEEEEEEcC-CCEEEEEEEecCCCCCccCCCCceEEEEEEEECC-CCEEEEEEEEc
Confidence 4554444443 345323 6677888866 556777754321 111 112356788888875 47988887664
No 49
>2lgh_A Uncharacterized protein; AHSA1, start domain, COG3832, PF08327, HSP90, heat shock, ST genomics, PSI-biology; NMR {Aeromonas hydrophila subsp}
Probab=74.50 E-value=13 Score=23.07 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=36.0
Q ss_pred CCeEEEEEEe-cCCe-eeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEE
Q 034001 4 PGTVITWTYK-HDGV-TEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKY 73 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~-~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~y 73 (106)
+|..-.+.+. ++|. ...+.-++.++++ .+++.|+. .| ....++.|.|.+ ++|+++.+..+
T Consensus 47 ~Gg~~~~~~~~~~G~~~~~~~g~v~e~~p-~~~l~~~~-~~-------~~~~~~~l~~~~-~gT~l~~~~~~ 108 (144)
T 2lgh_A 47 VGGRFCHHMAAKDGSAGFDFTGTFTRVEA-PTRLSFVM-DD-------GREVDVQFASEP-GGTWVQETFDA 108 (144)
T ss_dssp TTCEEEEEEEETTSSCEEEEEEEEEEEET-TTEEEEEE-TT-------CCEEEEEEEEET-TEEEEEEEEEC
T ss_pred CCCEEEEEEECCCCCceEEeEEEEEEEeC-CCEEEEEe-cC-------CcEEEEEEEEcC-CCEEEEEEEEC
Confidence 4444444442 3443 2345567777875 56788885 33 135678888875 47888777665
No 50
>1xn5_A BH1534 unknown conserved protein; structural genomics, protein structure initiative, PSI, BACI halodurans protein BH1534, alpha + beta; NMR {Bacillus halodurans} SCOP: d.129.3.5
Probab=73.17 E-value=14 Score=22.87 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=37.1
Q ss_pred CCCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEE
Q 034001 3 KPGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIK 72 (106)
Q Consensus 3 ~~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ 72 (106)
.+|....+.+ +.| .+.-++.++++ .+.+.|+... . ....+++|.|.++ +|+++++..
T Consensus 42 ~~Gg~~~~~~-~~g---~~~~~v~e~~p-~~~l~~~~~~-~------~~~~~~~l~~~~~-gT~l~~~~~ 98 (146)
T 1xn5_A 42 ETGHHFHLQS-PFG---PSPCQVTDVER-PIKLSFTWDT-D------GWSVTFHLKEEEN-GTIFTIVHS 98 (146)
T ss_dssp CTTCEEEEEC-SSC---EEEEEEEEEET-TTEEEEEETT-T------TEEEEEEEEECSS-SEEEEEEEE
T ss_pred cCCCEEEEEe-cCC---ceEEEEEEEeC-CcEEEEEEeC-C------CEEEEEEEEEcCC-CEEEEEEEE
Confidence 3566555555 344 25678888876 5677787642 1 2356788888754 698887765
No 51
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=70.05 E-value=10 Score=25.05 Aligned_cols=30 Identities=3% Similarity=-0.047 Sum_probs=25.2
Q ss_pred eeEEEEEEEEEecCCCceEEEEEEEEEeCC
Q 034001 48 YNSFYVTVQAIPKGEHSCLARWTIKYEKKS 77 (106)
Q Consensus 48 ~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~ 77 (106)
...+.+.+.+.|.++++|.+.+....++.+
T Consensus 152 ~~~~~~~~~i~p~~~~~t~v~~~~~~Dp~G 181 (214)
T 1ln1_A 152 VKQYKQSLAIESDGKKGSKVFMYYFDNPGG 181 (214)
T ss_dssp ECCEEEEEEEEECSSSSEEEEEEEEECCSS
T ss_pred EEEEEEEEEEecCCCCceEEEEEEEECCCC
Confidence 456778888999877799999999999884
No 52
>3eli_A AHSA1, AHA1 domain protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} SCOP: d.129.3.5
Probab=68.07 E-value=19 Score=22.35 Aligned_cols=91 Identities=9% Similarity=-0.117 Sum_probs=48.2
Q ss_pred CCCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCcccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCC
Q 034001 3 KPGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGHLLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDV 80 (106)
Q Consensus 3 ~~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~ 80 (106)
.+|..-.+.+. ++|......=++.++++ .+.+.|+....+... .-.....++.|.|.++ +|+++++-. ..
T Consensus 48 ~~Gg~~~~~~~~~~G~~~~~~g~v~e~~p-~~~l~~~~~~~~~~~~~~~~~~v~~~l~~~~~-gT~l~l~~~--~~---- 119 (152)
T 3eli_A 48 TRLGPWFSVMVNGEGQRYKVSGQVTHVKP-PQSVGFTWGWHDDDDRRGAESHVMFIVEPCAK-GARLILDHR--EL---- 119 (152)
T ss_dssp SSSEEEEEEEECTTCCEEEEEEEEEEEET-TTEEEEEEEEECTTSCEEEEEEEEEECCBC---CEEEEEEEE--SC----
T ss_pred cCCcEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEEeecCCCCCCCCcEEEEEEEEECCC-CEEEEEEEc--cC----
Confidence 35665556653 34533356678888876 466777764322111 1234567888888765 588776533 11
Q ss_pred CChh---hHHHHHHHHHHHHHhcC
Q 034001 81 PDPQ---GIVNLAIEMTKGIEAHH 101 (106)
Q Consensus 81 ~~p~---~~~~~~~~~~k~ie~yl 101 (106)
++++ ...+.-..++..|++||
T Consensus 120 ~~~~~~~~~~~GW~~~L~~L~~~l 143 (152)
T 3eli_A 120 GDDEMSLRHEEGWTSSLRKLAAEL 143 (152)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222 22333455666666654
No 53
>3q63_A MLL2253 protein; structural genomics, PSI-biology, protein structure initiati alpha-beta protein, unknown, structure genomics; 2.00A {Mesorhizobium loti}
Probab=60.05 E-value=28 Score=21.63 Aligned_cols=92 Identities=11% Similarity=-0.030 Sum_probs=47.0
Q ss_pred CCeEEEEEEecCCeeeEEEEEEEEEeCCCCEEEEEEEeCcc-cCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCC
Q 034001 4 PGTVITWTYKHDGVTEIAKEIIEEIDDEKNSTTFKVIEGHL-LDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPD 82 (106)
Q Consensus 4 ~Gsvr~~~~~~~g~~~~~kErl~~~D~~~~~~~y~iieg~~-~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~ 82 (106)
+|..-.+. .+.| ..+.=++.++++ .+++.|+...++. ...-..-..+++|.|.++ +|+++++-..... +...
T Consensus 47 ~Gg~~~~~-~~~g--~~~~g~v~e~~p-~~~l~~~~~~~~~~~~~~~~s~v~~~l~~~~~-gT~l~l~~~g~~~--~~~~ 119 (151)
T 3q63_A 47 VGHRFNIS-ADWG--GVLDCEVLAVEP-NKTLSYTWNLAHQDPAFDLRSVVTFTLTPTPT-GTHLRMEQSGFRP--DQRR 119 (151)
T ss_dssp TTCEEEEE-CTTS--CEEEEEEEEEET-TTEEEEECBBCCSSTTTCBCCEEEEEEEECSS-SEEEEEEEECCCT--TCHH
T ss_pred CCCEEEEE-CCCC--CEEEEEEEEEeC-CCEEEEEEecCCCCCCCCCCeEEEEEEEEcCC-CEEEEEEEeCCCc--chHH
Confidence 55554444 3233 246667777866 4567777643221 001112356788888765 6988877653221 1100
Q ss_pred -hhhHHHHHHHHHHHHHhcCC
Q 034001 83 -PQGIVNLAIEMTKGIEAHHP 102 (106)
Q Consensus 83 -p~~~~~~~~~~~k~ie~yl~ 102 (106)
-......-..++..|.+||-
T Consensus 120 ~~~~~~~GW~~~L~~L~~~le 140 (151)
T 3q63_A 120 AYGGAKMGWPQFFEKLEQLLD 140 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhCHHHHHHHHHHHHh
Confidence 01122334456667766654
No 54
>2nn5_A Hypothetical protein EF_2215; structural genomics, APC29336, PSI-2, structure initiative; HET: MSE; 1.45A {Enterococcus faecalis} SCOP: d.129.3.5
Probab=59.40 E-value=34 Score=22.33 Aligned_cols=71 Identities=4% Similarity=-0.092 Sum_probs=39.8
Q ss_pred EEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCChhhHHHHHHHHHHHHHhc
Q 034001 21 AKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 100 (106)
Q Consensus 21 ~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p~~~~~~~~~~~k~ie~y 100 (106)
..-++.++++. +++.|+.- + ...+++|.|..+++|+++++-.|...-.. ...........++..|.++
T Consensus 88 ~~~~v~e~~p~-~rl~~~~~-~--------~~v~~~l~~~~~~gT~l~~~~~~~~g~~~--~~~~~~~GW~~~L~~Lk~~ 155 (184)
T 2nn5_A 88 ETMPFTDYAEE-KYLGVTWD-T--------GIIYFDLKEQAPHQTLLVFSESLPENFTT--PRHKDIAGWSIVLNRLKQV 155 (184)
T ss_dssp EEEEEEEEETT-TEEEEEET-T--------EEEEEEEEEEETTEEEEEEEEEECTTCSS--CHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCC-CEEEEEEc-C--------eEEEEEEEECCCCCEEEEEEEeccCCccc--hhhHHHHHHHHHHHHHHHH
Confidence 44577777665 45666652 1 35688888833457999988444321111 1222334455666667666
Q ss_pred CCC
Q 034001 101 HPP 103 (106)
Q Consensus 101 l~~ 103 (106)
|-.
T Consensus 156 le~ 158 (184)
T 2nn5_A 156 VET 158 (184)
T ss_dssp HHC
T ss_pred Hhc
Confidence 543
No 55
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=58.72 E-value=32 Score=21.84 Aligned_cols=69 Identities=9% Similarity=0.030 Sum_probs=40.5
Q ss_pred CCCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEE-eCc-ccCc-e-----e----EEEEEEEEEecCCCceEEEE
Q 034001 3 KPGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVI-EGH-LLDK-Y-----N----SFYVTVQAIPKGEHSCLARW 69 (106)
Q Consensus 3 ~~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~ii-eg~-~~~~-~-----~----~~~~t~~v~p~~~g~s~v~W 69 (106)
.+|..-.+.+. ++|......-++.++++ .+++.|+.. .++ .... + . ....++.|.|.++ +|++++
T Consensus 54 ~~Gg~~~~~~~~~~G~~~~~~~~v~e~~p-~~rl~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~-gT~l~~ 131 (178)
T 1xfs_A 54 RPGGEFYTVMQDPEGNKFPNSGCFLEVTD-EKRLIWTSALVKNYRPAVPATTSDKECAHIVMTAVIELQPTSS-GTRYTA 131 (178)
T ss_dssp STTCEEEEEEECTTCCEEEEEEEEEEEET-TTEEEEESSEEGGGEECCC-----------CCEEEEEEEECSS-SEEEEE
T ss_pred ECCcEEEEEEECCCCCEEEEEEEEEEEeC-CCEEEEEEEEcCCCCccccccccccccccccEEEEEEEEECCC-CEEEEE
Confidence 35665566654 34533345667888875 456777753 111 1100 0 0 3467888889764 799998
Q ss_pred EEEE
Q 034001 70 TIKY 73 (106)
Q Consensus 70 ~~~y 73 (106)
+..|
T Consensus 132 ~~~~ 135 (178)
T 1xfs_A 132 CAMH 135 (178)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8875
No 56
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=54.28 E-value=38 Score=21.35 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=38.8
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEE-eCcccCceeEEEEEEEEEecCCCceEEEEEEEEE
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVI-EGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYE 74 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~ii-eg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye 74 (106)
+|..-.+.+. ++|....+.=++.++++ .+++.|+.. .++.... .-..++.|.|.++ +|+++++..|.
T Consensus 58 ~Gg~~~~~~~~~~G~~~~~~g~v~e~~p-~~rl~~t~~~~~~~~~~--~s~vt~~l~~~~~-gT~l~l~~~~~ 126 (164)
T 3pu2_A 58 KGGLIRQVWTGPEGRTRGLTGRVILAEP-PHRLIHSELYDEDWTGG--ETLVTLQLLPVEG-GTELAMAVDYA 126 (164)
T ss_dssp TTCEEEEEEECGGGCEEEEEEEEEEEET-TTEEEEEEBCC---CCS--CEEEEEEEEEETT-EEEEEEEEECS
T ss_pred CCCEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEEeccCCCCCC--CEEEEEEEEEcCC-CEEEEEEEEeC
Confidence 4554444442 34433356667788866 456777753 1211111 2467888999764 69999988853
No 57
>2kew_A Uncharacterized protein YNDB; start domain, resonance assignments, lipid binding, structural genomics, unknown FU PSI-2; NMR {Bacillus subtilis subsp} PDB: 2kte_A
Probab=49.82 E-value=30 Score=21.47 Aligned_cols=43 Identities=14% Similarity=0.042 Sum_probs=28.0
Q ss_pred EEEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEE
Q 034001 21 AKEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIK 72 (106)
Q Consensus 21 ~kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ 72 (106)
+.-++.++++. +.+.|+...+ ....+++|.|.++ +|+++++..
T Consensus 61 ~~~~v~e~~p~-~~l~~~~~~~-------~~~~~~~l~~~~~-gT~l~~~~~ 103 (152)
T 2kew_A 61 SPCKVLAVQAP-TELSFEWDTE-------GWVVTFQLEDLGE-KTGFTLIHS 103 (152)
T ss_dssp CCBEEEEEETT-TEEEEECTTS-------CCEEEEEEECCSS-CEEEEEEEC
T ss_pred eEEEEEEEeCC-cEEEEEEccC-------CEEEEEEEEECCC-CEEEEEEEE
Confidence 44567778764 6777775332 2356788888765 688877654
No 58
>4fpw_A CALU16; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 2.50A {Micromonospora echinospora} PDB: 2luz_A
Probab=46.27 E-value=53 Score=21.45 Aligned_cols=69 Identities=9% Similarity=-0.145 Sum_probs=40.4
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCChhhHHHHHHHHHHHHHhcCC
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAHHP 102 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p~~~~~~~~~~~k~ie~yl~ 102 (106)
++.++++ .+.+.|+...++. .....++.|.|.+ ++|+++++-.... . ..-......-..++..|.+||-
T Consensus 72 ~v~e~~p-p~rl~~tw~~~~~----~~s~vt~~l~~~~-~gT~Ltl~~~~~~--~--e~~~~~~~GW~~~L~~L~~~L~ 140 (181)
T 4fpw_A 72 DILRCEP-PRRLTISWVYEGK----PDSEVELRLSEEG-DGTLLELEHATTS--E--QMLVEVGVGWEMALDFLGMFIR 140 (181)
T ss_dssp ECCEEET-TTEEEEEEBCTTS----CCEEEEEEEEEET-TEEEEEEEEEESC--H--HHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEcC-CcEEEEEEEcCCC----CcEEEEEEEEECC-CcEEEEEEEEcCC--H--HHHHHHHHhHHHHHHHHHHHhC
Confidence 5666655 5677787654432 1346788888964 5798887755431 1 0112223344567778888874
No 59
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=45.59 E-value=54 Score=20.55 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=53.1
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCc---ccC-ceeEEEEEEEEEecCCCceEEEEEEEEEeCCC
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGH---LLD-KYNSFYVTVQAIPKGEHSCLARWTIKYEKKSE 78 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~---~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~ 78 (106)
+|..-.+.+. ++|......-++.++++ .+++.|+..-.+ ... .......++.|.|.+ ++|+++++..+...
T Consensus 57 ~Gg~~~~~~~~~~g~~~~~~~~v~e~~p-~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~-~gT~lt~~~~~~~~-- 132 (172)
T 2ldk_A 57 VGGKAAYYMTGPDGTKARGWWQFTTIEA-PDHLEFDDGFADEHGAPVDELGVTHATVKLEPLE-NRTRMTIISTFESE-- 132 (172)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEEECS-SSEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEET-TEEEEEEEEEESCH--
T ss_pred CCCEEEEEEECCCCCEEeeEEEEEEEcC-CCEEEEEEeecCCCCCccCCCccEEEEEEEEEcC-CCEEEEEEEEcCCH--
Confidence 5555555553 34543346678888865 566777764322 110 112457788899975 47999998876310
Q ss_pred CCCChhh-----HHHHHHHHHHHHHhcCCC
Q 034001 79 DVPDPQG-----IVNLAIEMTKGIEAHHPP 103 (106)
Q Consensus 79 ~~~~p~~-----~~~~~~~~~k~ie~yl~~ 103 (106)
..-+. .......++..|.+||-+
T Consensus 133 --~~~~~~~~~~~~~Gw~~~L~~L~~~le~ 160 (172)
T 2ldk_A 133 --EQMQKMAEMGMEEGMREAIEQIDAVLSE 160 (172)
T ss_dssp --HHHHHHHHHTHHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 00011 123345566777776644
No 60
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=44.96 E-value=48 Score=24.96 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=46.9
Q ss_pred CCeEEEEEEecCCeeeEEEEEE--EEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEE
Q 034001 4 PGTVITWTYKHDGVTEIAKEII--EEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYE 74 (106)
Q Consensus 4 ~Gsvr~~~~~~~g~~~~~kErl--~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye 74 (106)
+|+.- +.+. .+ ..+.-|+ +.+|+ .+.+...+..|++. .|.++..+-.|.+.++ ||+++..++|.
T Consensus 47 ~G~~~-~~~~-~~--~~w~~~~~~t~~~~-~~~F~d~~~~gp~~-~~~~w~h~h~f~~~~~-gt~~~d~~~~~ 112 (516)
T 3oh8_A 47 DGTTI-FSLP-AG--LKWVARHDLSGFLN-GSRFTDVCLTAPVK-ALANWRHVHNFVDQDG-GTLITDSVSTR 112 (516)
T ss_dssp SCEEE-EECS-TT--CEEEEEECGGGCBT-TTEEEEECCSCSSG-GGSSCEEEEEEEEETT-EEEEEEEEECS
T ss_pred CCeEE-EecC-CC--cEEEEEEccccccC-CCeEEEEeccCccc-ceeeeEEEEEEEEcCC-CcEEEEEEEee
Confidence 57777 6665 44 5677777 76655 55788888888742 2667778888888755 69999999987
No 61
>3ni8_A PFC0360W protein; heat shock, malaria, ATPase, structural genomics consortium, unknown function; 2.50A {Plasmodium falciparum}
Probab=44.49 E-value=58 Score=20.59 Aligned_cols=79 Identities=16% Similarity=-0.020 Sum_probs=41.2
Q ss_pred EEEEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCC---hhhHHHHHHH-HHHHH
Q 034001 22 KEIIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPD---PQGIVNLAIE-MTKGI 97 (106)
Q Consensus 22 kErl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~---p~~~~~~~~~-~~k~i 97 (106)
.=++.++++. +++.|+---.+.... ..-..++.|.|.++++|+++.+-.-.+....... .+...+.-.. ++..|
T Consensus 71 ~g~v~ev~p~-~rlv~tw~~~~~~~~-~~s~vt~~l~~~~~~~T~ltl~~~g~~~~~~~~~~~~~~~~~~GW~~~~L~~L 148 (158)
T 3ni8_A 71 LGEFTEITKP-HKIVEKWKFRDWNEC-DYSTVTVEFISVKENHTKLKLTHNNIPASNKYNEGGVLERCKNGWTQNFLHNI 148 (158)
T ss_dssp EEEEEEEETT-TEEEEEEEETTSCSS-CCEEEEEEEEEEETTEEEEEEEEECCCSSCTTCCCCHHHHHHHHHHHTHHHHH
T ss_pred EEEEEEEeCC-cEEEEEEEecCCCCC-CcEEEEEEEEecCCCCEEEEEEEEccCchhhhccchhHHHHHhChhHHHHHHH
Confidence 3356667654 556655432222211 1135788888865567888776553322221111 2233344455 58888
Q ss_pred HhcCC
Q 034001 98 EAHHP 102 (106)
Q Consensus 98 e~yl~ 102 (106)
.+||-
T Consensus 149 k~~Le 153 (158)
T 3ni8_A 149 EVILG 153 (158)
T ss_dssp HHTSC
T ss_pred HHHhC
Confidence 88874
No 62
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=40.37 E-value=38 Score=21.70 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=14.2
Q ss_pred EEEEEEecCCCceEEEEEE
Q 034001 53 VTVQAIPKGEHSCLARWTI 71 (106)
Q Consensus 53 ~t~~v~p~~~g~s~v~W~~ 71 (106)
..+++.|.++ ||.|+|++
T Consensus 107 ~~~rv~p~g~-GTeV~~tl 124 (156)
T 2qpv_A 107 NALRVTPNGS-GTEVSFTL 124 (156)
T ss_dssp EEEEEEEETT-EEEEEEEE
T ss_pred EEEEEEeCCC-CEEEEEEE
Confidence 4678888765 69999998
No 63
>3nrf_A APAG protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.50A {Pseudomonas aeruginosa} PDB: 3sb3_A
Probab=38.90 E-value=67 Score=19.74 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=35.5
Q ss_pred EEEEEeCCCCEEEEEEEeCccc-Cce---eEEEEEEEEEecCCC---ceEEEEEEEE
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLL-DKY---NSFYVTVQAIPKGEH---SCLARWTIKY 73 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~-~~~---~~~~~t~~v~p~~~g---~s~v~W~~~y 73 (106)
=+.+++++++.+...-++..+. ..+ .+.++..-+....+. -+.|+|+.++
T Consensus 49 C~~a~~~~gkef~ldTVde~L~~g~lk~g~~vkG~avFaS~d~sVy~a~lVK~s~~C 105 (106)
T 3nrf_A 49 CLVAQSAAGQSFRLDTVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRC 105 (106)
T ss_dssp EEEEEETTSCEEEEEEECGGGGCSEECTTCEEEEEEEEEESSSGGGGEEEEEEESCC
T ss_pred hheeeCcCCCEEEecccchhhhhccccCCCceeeEEEEeeCChhheeeeEEEeeccC
Confidence 3567889999999998887765 223 346777777765554 5889998653
No 64
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=37.22 E-value=54 Score=21.69 Aligned_cols=51 Identities=10% Similarity=0.203 Sum_probs=34.7
Q ss_pred eEEEEEEEEEecCCC--ceEEEEEEEEEeCCCCCCChhhHH-----HHHHHHHHHHHhcCC
Q 034001 49 NSFYVTVQAIPKGEH--SCLARWTIKYEKKSEDVPDPQGIV-----NLAIEMTKGIEAHHP 102 (106)
Q Consensus 49 ~~~~~t~~v~p~~~g--~s~v~W~~~ye~~~~~~~~p~~~~-----~~~~~~~k~ie~yl~ 102 (106)
..+.+-+.+.|.+++ +|.+.|....++.+. . |.-+. .....+++.|.+++.
T Consensus 156 ~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-i--P~~lvn~~~~~~~~~~~~~Lr~~~~ 213 (221)
T 3p0l_A 156 EHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGW-L--PKSIINQVLSQTQVDFANHLRKRLE 213 (221)
T ss_dssp EECSCEEEEEEETTEEEEEEEEEEECEECCSS-C--CHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eccceEEEEEECCCCCCcEEEEEEEEecCCCC-C--CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566788898766 799999999998765 2 33222 334566777777766
No 65
>1x53_A Activator of 90 kDa heat shock protein ATPase homolog 1; AHA1, HSP90,DUF704, C-terminal domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.129.3.5
Probab=36.39 E-value=72 Score=19.34 Aligned_cols=73 Identities=10% Similarity=-0.087 Sum_probs=39.2
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCChhhHHHHHHH-HHHHHHhcCC
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQGIVNLAIE-MTKGIEAHHP 102 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p~~~~~~~~~-~~k~ie~yl~ 102 (106)
++.++++ .+++.|+-.-.+.... .....++.+.|.+ ++|+++++-...+... .....+.... ++..|.+||-
T Consensus 64 ~v~e~~p-~~~l~~~~~~~~~~~~-~~~~v~~~l~~~~-~gT~l~~~~~~~~~~~----~~~~~~Gw~~~~l~~L~~~le 136 (145)
T 1x53_A 64 EFTDLVP-EKHIVMKWRFKSWPEG-HFATITLTFIDKN-GETELCMEGRGIPAPE----EERTRQGWQRYYFEGIKQTFG 136 (145)
T ss_dssp CEEEEET-TTEEEEEEEETTSCTT-CCEEEEEECCBCS-SCEEEEEEEEEEEHHH----HHHHHHTTHHHHHHHHHHHTC
T ss_pred EEEEEeC-CCEEEEEEecCCCCCC-CcEEEEEEEEECC-CCEEEEEEEECCCHHH----HHHHHhchhHHHHHHHHHHHh
Confidence 5566654 5567777544332211 1235677888864 5799888854332210 1222233344 5777777764
Q ss_pred C
Q 034001 103 P 103 (106)
Q Consensus 103 ~ 103 (106)
.
T Consensus 137 ~ 137 (145)
T 1x53_A 137 Y 137 (145)
T ss_dssp C
T ss_pred c
Confidence 3
No 66
>2r5x_A Protein YUGN, uncharacterized conserved protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.04A {Geobacillus kaustophilus}
Probab=25.02 E-value=93 Score=19.70 Aligned_cols=26 Identities=8% Similarity=0.089 Sum_probs=20.6
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCC
Q 034001 80 VPDPQGIVNLAIEMTKGIEAHHPPKQ 105 (106)
Q Consensus 80 ~~~p~~~~~~~~~~~k~ie~yl~~~~ 105 (106)
..-|+.+.+.+.+.++.|+..|++-+
T Consensus 95 ~~~p~~~v~~~~~~L~ele~~L~~~~ 120 (129)
T 2r5x_A 95 EHFPSSLVSQCQNVLAQVKSELEKIK 120 (129)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 34478889999999999999887643
No 67
>2i46_A Adrenocortical dysplasia protein homolog; TPP1, OB fold, POT1 binding, protein binding; 2.70A {Homo sapiens}
Probab=22.75 E-value=33 Score=22.30 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=45.0
Q ss_pred EEEEEeCCCCEEEEEEEeCcccCceeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCChhhH-----HHHHHHHHHHHH
Q 034001 24 IIEEIDDEKNSTTFKVIEGHLLDKYNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQGI-----VNLAIEMTKGIE 98 (106)
Q Consensus 24 rl~~~D~~~~~~~y~iieg~~~~~~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p~~~-----~~~~~~~~k~ie 98 (106)
-+...|=+.+.+.|+-++|-++ .+++|...+++.+.+...-.--|--.|.......|...-. -+--.++.+.++
T Consensus 72 A~~~sdwEEk~Fgfr~~egrll-lLqd~~V~vqv~e~~~~~EF~lqVdrF~lLPtEqpr~~v~~CN~dp~VrkKl~~cle 150 (161)
T 2i46_A 72 ALDTSDWEEKEFGFRGTEGRLL-LLQDCGVHVQVAEGGAPAEFYLQVDRFSLLPTEQPRLRVPGCNQDLDVQKKLYDCLE 150 (161)
T ss_dssp HHHTSCCTTSCSSCTTCTTEEE-EEEEEEEEEECCBTTBCCEEEEEEEEEEEEEEECCCCCCCBGGGSHHHHHHHHHHHT
T ss_pred HhhhhhhhhhhcCcccccceEE-EEecCCEEEEEecCCCceeEEEEEeeEeeccccCccccccCCCCCHHHHHHHHHHHH
Confidence 3344566666677766677664 4789999999877654344444444566554433322100 133456777889
Q ss_pred hcCCCCC
Q 034001 99 AHHPPKQ 105 (106)
Q Consensus 99 ~yl~~~~ 105 (106)
+||..++
T Consensus 151 ~hlsEs~ 157 (161)
T 2i46_A 151 EHLSEST 157 (161)
T ss_dssp TC-----
T ss_pred HHhhccC
Confidence 9987654
No 68
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=22.44 E-value=1.7e+02 Score=19.19 Aligned_cols=28 Identities=4% Similarity=-0.237 Sum_probs=20.7
Q ss_pred EEEEEEEEecC--CCceEEEEEEEEEeCCC
Q 034001 51 FYVTVQAIPKG--EHSCLARWTIKYEKKSE 78 (106)
Q Consensus 51 ~~~t~~v~p~~--~g~s~v~W~~~ye~~~~ 78 (106)
+.+-+.+.|.+ +++|.+.|....++.+.
T Consensus 172 ~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~ 201 (231)
T 2r55_A 172 HPCGCFCEPLPGEPTKTNLVTFFHTDLSGY 201 (231)
T ss_dssp CSEEEEEEECC--CCCEEEEEEECEECCSS
T ss_pred EeeEEEEEEeCCCCCcEEEEEEEEeCCCCC
Confidence 34556777764 45899999999998764
No 69
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=22.32 E-value=1.8e+02 Score=19.51 Aligned_cols=55 Identities=13% Similarity=0.057 Sum_probs=36.4
Q ss_pred eeEEEEEEEEEecCCCceEEEEEEEEEeCCCCCCChh-h-HHHHHHHHHHHHHhcCCC
Q 034001 48 YNSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQ-G-IVNLAIEMTKGIEAHHPP 103 (106)
Q Consensus 48 ~~~~~~t~~v~p~~~g~s~v~W~~~ye~~~~~~~~p~-~-~~~~~~~~~k~ie~yl~~ 103 (106)
...+.+.+.+.|.++++|.++|.+..++.+. .|..- . +.......++.|-+++.+
T Consensus 171 ~~~~~~g~~i~P~~~~~t~vt~~~~~Dp~G~-iP~~ln~~~~~~~~~~l~~LR~~~~~ 227 (237)
T 2pso_A 171 AVVMDSQYLIEPCGSGKSRLTHICRIDLKGH-SPEWYSKGFGHLCAAEVARIRNSFQP 227 (237)
T ss_dssp CCEEEEEEEEEECSTTCEEEEEEEEECCSSS-CTTTTTTHHHHHHHHHHHHHHHTTSC
T ss_pred EEEeccEEEEEECCCCCEEEEEEEEeCCCCC-chHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566778889998878999999999998853 34321 1 223344556666665544
No 70
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=21.84 E-value=1.6e+02 Score=18.49 Aligned_cols=68 Identities=16% Similarity=0.058 Sum_probs=39.1
Q ss_pred CCeEEEEEEe-cCCeeeEEEEEEEEEeCCCCEEEEEEEeCc---ccC-ceeEEEEEEEEEecCCCceEEEEEEEE
Q 034001 4 PGTVITWTYK-HDGVTEIAKEIIEEIDDEKNSTTFKVIEGH---LLD-KYNSFYVTVQAIPKGEHSCLARWTIKY 73 (106)
Q Consensus 4 ~Gsvr~~~~~-~~g~~~~~kErl~~~D~~~~~~~y~iieg~---~~~-~~~~~~~t~~v~p~~~g~s~v~W~~~y 73 (106)
+|..-.+.+. ++|......-++.++++ .+++.|+..-++ ... .......+++|.|.+ ++|+++.+..|
T Consensus 61 ~Gg~~~~~~~~~~G~~~~~~g~v~e~~p-~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~-~gT~l~~~~~~ 133 (175)
T 2lf2_A 61 EGGTWLYAMVGPNGEEHWSICEYAIIKP-IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKG-EITEVQYHISY 133 (175)
T ss_dssp TTCEEEEEEECSSSCEEEEEEEECCCCS-SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEET-TEEEEEEEEEC
T ss_pred CCCEEEEEEECCCCCEEEeEEEEEEEcC-CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECC-CCEEEEEEEec
Confidence 4554444443 34533346668888865 556777753221 111 112456788898975 47988887664
No 71
>1ug8_A Poly(A)-specific ribonuclease; R3H domain, poly(A)-specific 3'-exoribonuclease, PARN, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.68.7.1
Probab=21.37 E-value=33 Score=20.33 Aligned_cols=26 Identities=8% Similarity=0.044 Sum_probs=20.9
Q ss_pred CCChhhHHHHHHHHHHHHHhcCCCCC
Q 034001 80 VPDPQGIVNLAIEMTKGIEAHHPPKQ 105 (106)
Q Consensus 80 ~~~p~~~~~~~~~~~k~ie~yl~~~~ 105 (106)
+|-|+..+++..++...|+++|.++.
T Consensus 3 i~ip~e~k~~id~i~~kIe~FL~s~~ 28 (87)
T 1ug8_A 3 SGSSGDQKKFIDQVIEKIEDFLQSEE 28 (87)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred cccChHHHHHHHHHHHHHHHHHhCCC
Confidence 34577778889999999999987754
No 72
>3oyy_A EF-P, elongation factor P; translation; 1.75A {Pseudomonas aeruginosa}
Probab=20.37 E-value=1.1e+02 Score=20.43 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=17.7
Q ss_pred EEEEEEeCCCCEEEEEEEeCcc
Q 034001 23 EIIEEIDDEKNSTTFKVIEGHL 44 (106)
Q Consensus 23 Erl~~~D~~~~~~~y~iieg~~ 44 (106)
|+++..+-+.+.+.|.-.+|+.
T Consensus 61 ekve~~~ver~~~qylY~dgd~ 82 (191)
T 3oyy_A 61 DKLEPIILDRKEVTYSYFADPL 82 (191)
T ss_dssp CEEEECCCEEEEEEEEEECSSS
T ss_pred CEEEeeeEEEEEEEEEEecCCE
Confidence 5778888888888888888874
Done!