Query 034004
Match_columns 106
No_of_seqs 102 out of 1574
Neff 10.3
Searched_HMMs 13730
Date Mon Mar 25 14:39:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034004.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034004hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b7fa1 d.58.7.1 (A:123-204) S 99.9 7.8E-26 5.7E-30 119.6 10.2 80 26-105 2-81 (82)
2 d1cvja1 d.58.7.1 (A:11-90) Pol 99.9 2.1E-25 1.5E-29 117.4 10.9 79 28-106 2-80 (80)
3 d1fxla1 d.58.7.1 (A:37-118) Hu 99.9 3.4E-25 2.4E-29 117.2 11.5 80 26-105 2-81 (82)
4 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.9 6.5E-25 4.7E-29 117.5 11.4 83 23-105 4-86 (88)
5 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.9 3.8E-25 2.8E-29 119.5 10.3 85 22-106 5-89 (93)
6 d2cq0a1 d.58.7.1 (A:231-320) E 99.9 1E-24 7.4E-29 117.2 11.4 82 24-105 6-87 (90)
7 d2cqba1 d.58.7.1 (A:1-89) Pept 99.9 5.2E-25 3.8E-29 118.1 9.5 81 25-105 4-84 (89)
8 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.9 3E-24 2.2E-28 115.9 11.9 80 25-104 6-85 (93)
9 d2cpza1 d.58.7.1 (A:383-484) C 99.9 2.3E-24 1.7E-28 118.2 11.3 82 24-105 16-97 (102)
10 d2cqca1 d.58.7.1 (A:109-191) A 99.9 3.5E-24 2.5E-28 113.5 11.1 79 22-100 5-83 (83)
11 d2cpha1 d.58.7.1 (A:454-547) P 99.9 1.9E-24 1.4E-28 116.9 10.1 85 22-106 4-90 (94)
12 d2ghpa1 d.58.7.1 (A:116-196) U 99.9 1.5E-24 1.1E-28 114.4 9.0 80 26-105 1-80 (81)
13 d1whwa_ d.58.7.1 (A:) Probable 99.9 6E-24 4.4E-28 115.9 11.3 83 23-105 5-87 (99)
14 d1b7fa2 d.58.7.1 (A:205-289) S 99.9 7.1E-24 5.2E-28 112.7 11.0 81 23-103 3-85 (85)
15 d2u2fa_ d.58.7.1 (A:) Splicing 99.9 2E-24 1.4E-28 114.9 8.4 79 27-105 2-80 (85)
16 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.9 1.7E-23 1.3E-27 112.2 12.0 83 21-105 3-85 (90)
17 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.9 1.5E-23 1.1E-27 120.6 11.4 83 23-105 39-121 (139)
18 d1fxla2 d.58.7.1 (A:119-203) H 99.9 1.9E-23 1.4E-27 111.0 10.1 78 26-103 6-85 (85)
19 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.9 3.6E-23 2.7E-27 109.7 11.1 80 24-104 4-83 (84)
20 d1p1ta_ d.58.7.1 (A:) Cleavage 99.9 2.5E-24 1.8E-28 118.4 6.8 80 26-105 8-87 (104)
21 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.9 1.3E-23 9.2E-28 112.8 9.0 81 25-105 4-84 (90)
22 d1no8a_ d.58.7.1 (A:) Nuclear 99.9 3.1E-23 2.2E-27 108.6 10.2 76 28-104 2-77 (78)
23 d2cqga1 d.58.7.1 (A:96-185) TA 99.9 8.4E-23 6.1E-27 109.5 12.0 81 23-105 5-85 (90)
24 d2cqda1 d.58.7.1 (A:1-103) RNA 99.9 4.7E-23 3.4E-27 113.0 11.0 82 23-105 7-88 (103)
25 d2cq4a1 d.58.7.1 (A:132-232) R 99.9 8.8E-24 6.4E-28 115.6 7.8 79 26-105 18-96 (101)
26 d2cq3a1 d.58.7.1 (A:110-202) R 99.9 1.8E-22 1.3E-26 108.8 12.3 82 22-105 7-88 (93)
27 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.9 4.5E-23 3.3E-27 109.1 8.8 77 29-105 1-78 (83)
28 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.9 1.6E-22 1.2E-26 109.9 10.9 84 22-105 4-93 (98)
29 d1uawa_ d.58.7.1 (A:) Musashi- 99.9 1.4E-23 1E-27 109.6 6.2 76 27-103 1-76 (77)
30 d1x4ba1 d.58.7.1 (A:8-110) Het 99.9 1.4E-22 1E-26 111.1 10.5 79 26-105 20-98 (103)
31 d1l3ka2 d.58.7.1 (A:103-181) N 99.9 2.8E-22 2E-26 105.1 11.0 77 26-103 2-78 (79)
32 d2cpea1 d.58.7.1 (A:353-453) R 99.9 1.5E-22 1.1E-26 110.6 10.4 84 22-105 4-95 (101)
33 d2cpfa1 d.58.7.1 (A:362-446) P 99.9 1E-22 7.4E-27 108.1 9.4 77 29-105 1-80 (85)
34 d1cvja2 d.58.7.1 (A:91-179) Po 99.9 1.6E-22 1.2E-26 108.2 9.3 78 26-105 8-85 (89)
35 d2ghpa3 d.58.7.1 (A:206-291) U 99.9 1.5E-22 1.1E-26 107.7 8.7 80 25-105 3-84 (86)
36 d1hd0a_ d.58.7.1 (A:) Heteroge 99.9 1.1E-22 8.2E-27 105.6 7.9 75 28-103 1-75 (75)
37 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.9 4.5E-22 3.3E-26 105.2 10.1 78 23-105 5-83 (83)
38 d2f9da1 d.58.7.1 (A:12-125) Pr 99.9 5.4E-22 4E-26 110.5 10.9 78 24-104 5-82 (114)
39 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.9 4.1E-22 3E-26 108.0 10.1 76 24-105 16-91 (96)
40 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.9 8.5E-22 6.2E-26 106.5 11.2 81 22-105 10-90 (95)
41 d2cpxa1 d.58.7.1 (A:291-392) R 99.9 3.3E-23 2.4E-27 113.4 5.2 82 24-105 16-97 (102)
42 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.9 2.6E-22 1.9E-26 109.7 8.2 82 23-105 15-96 (101)
43 d1x0fa1 d.58.7.1 (A:183-257) N 99.9 1.1E-22 7.8E-27 105.6 6.2 75 28-103 1-75 (75)
44 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.9 4.9E-23 3.6E-27 110.7 4.8 82 22-105 9-90 (91)
45 d2msta_ d.58.7.1 (A:) Neural R 99.9 2.8E-22 2E-26 104.1 7.5 75 28-103 1-75 (75)
46 d2cqpa1 d.58.7.1 (A:917-1002) 99.9 5.7E-22 4.2E-26 105.4 8.9 80 23-103 6-86 (86)
47 d1zh5a2 d.58.7.1 (A:105-189) L 99.9 2.7E-21 2E-25 102.5 11.0 77 26-104 6-82 (85)
48 d1fjca_ d.58.7.1 (A:) Nucleoli 99.9 9.6E-22 7E-26 106.5 9.4 78 23-105 13-90 (96)
49 d2adca2 d.58.7.1 (A:444-531) P 99.9 1.8E-21 1.3E-25 103.8 9.9 77 25-105 9-86 (88)
50 d2cpja1 d.58.7.1 (A:65-150) No 99.9 2.6E-21 1.9E-25 102.8 9.3 74 26-105 8-81 (86)
51 d2cpia1 d.58.7.1 (A:101-189) E 99.9 2E-21 1.5E-25 103.9 8.5 76 26-101 8-89 (89)
52 d2cpda1 d.58.7.1 (A:223-308) A 99.9 1E-20 7.5E-25 100.5 10.8 74 26-105 8-81 (86)
53 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.9 5.7E-21 4.1E-25 104.8 9.9 80 24-105 13-93 (104)
54 d2adca1 d.58.7.1 (A:335-443) P 99.9 3.1E-21 2.3E-25 106.6 8.9 75 26-105 2-77 (109)
55 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.8 5.1E-21 3.7E-25 100.2 9.1 75 24-106 3-77 (79)
56 d1whxa_ d.58.7.1 (A:) Probable 99.8 1.8E-21 1.3E-25 107.8 7.8 75 25-105 9-83 (111)
57 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.8 9.8E-22 7.1E-26 101.3 5.9 71 29-99 1-71 (72)
58 d1wg1a_ d.58.7.1 (A:) Probable 99.8 1.2E-20 8.9E-25 100.6 9.6 75 25-106 4-78 (88)
59 d1wg5a_ d.58.7.1 (A:) Heteroge 99.8 1.6E-20 1.2E-24 103.0 10.3 84 21-105 10-93 (104)
60 d1nu4a_ d.58.7.1 (A:) Spliceso 99.8 4.7E-21 3.4E-25 102.8 7.7 78 26-106 3-84 (91)
61 d1wf2a_ d.58.7.1 (A:) Heteroge 99.8 1.2E-20 8.5E-25 102.5 9.4 75 23-105 12-87 (98)
62 d2ghpa2 d.58.7.1 (A:41-115) U4 99.8 2E-20 1.4E-24 97.0 9.7 74 27-103 1-74 (75)
63 d1whya_ d.58.7.1 (A:) Putative 99.8 1.6E-20 1.2E-24 101.8 9.8 77 24-106 15-93 (97)
64 d2cq1a1 d.58.7.1 (A:51-138) Po 99.8 5.3E-20 3.9E-24 98.0 11.3 78 22-105 4-83 (88)
65 d2adba1 d.58.7.1 (A:177-284) P 99.8 1.1E-20 8E-25 104.3 8.7 80 22-105 3-84 (108)
66 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.8 5.1E-20 3.7E-24 95.4 10.5 71 29-106 1-71 (75)
67 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.8 7.9E-21 5.8E-25 99.7 7.0 73 27-105 2-75 (80)
68 d2disa1 d.58.7.1 (A:8-103) Hyp 99.8 1.6E-20 1.2E-24 101.6 8.3 79 27-105 2-84 (96)
69 d1weza_ d.58.7.1 (A:) Heteroge 99.8 1.8E-20 1.3E-24 102.5 8.4 81 22-105 11-91 (102)
70 d2cpya1 d.58.7.1 (A:536-638) R 99.8 1.6E-20 1.2E-24 102.8 8.0 80 24-104 6-85 (103)
71 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.8 1.9E-20 1.4E-24 99.9 7.3 75 24-105 3-77 (88)
72 d1wela1 d.58.7.1 (A:412-523) R 99.8 1.3E-20 9.5E-25 104.6 6.5 84 20-104 12-95 (112)
73 d1x4da1 d.58.7.1 (A:8-96) Matr 99.8 1.7E-19 1.2E-23 96.3 10.1 79 21-105 3-84 (89)
74 d1wg4a_ d.58.7.1 (A:) Splicing 99.8 7.5E-20 5.5E-24 99.2 8.5 77 21-104 10-86 (98)
75 d1wexa_ d.58.7.1 (A:) Heteroge 99.8 5E-19 3.7E-23 96.9 10.6 77 23-105 12-90 (104)
76 d3begb1 d.58.7.1 (B:121-207) S 99.8 1.7E-20 1.3E-24 99.8 4.4 70 28-104 2-71 (87)
77 d1u1qa_ d.58.7.1 (A:) Nuclear 99.8 1.9E-18 1.4E-22 102.6 13.6 84 21-105 92-175 (183)
78 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.8 3.5E-19 2.6E-23 96.7 8.8 78 22-105 14-94 (99)
79 d1weya_ d.58.7.1 (A:) Calcipre 99.7 3.3E-18 2.4E-22 93.6 5.9 76 24-105 3-83 (104)
80 d1u2fa_ d.58.7.1 (A:) Splicing 99.7 5.7E-20 4.1E-24 98.3 -2.6 77 27-104 2-83 (90)
81 d1jmta_ d.58.7.3 (A:) d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.93 E-value=7.8e-26 Score=119.64 Aligned_cols=80 Identities=33% Similarity=0.529 Sum_probs=77.1
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|++||.|..+.+..++.++.++|+|||+|.+.++|++|++.|||..+.|+.|+|++++|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 56899999999999999999999999999999999988999999999999999999999999999999999999999986
No 2
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.1e-25 Score=117.45 Aligned_cols=79 Identities=30% Similarity=0.604 Sum_probs=76.7
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccCC
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHKD 106 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~~ 106 (106)
.|||+|||..+++++|+++|+.+|.|..+.+..++.++.++|+|||+|.+.++|+.|++.|+|..+.|++|+|+|++.|
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~d 80 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRD 80 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCCC
Confidence 5999999999999999999999999999999999989999999999999999999999999999999999999999886
No 3
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=3.4e-25 Score=117.15 Aligned_cols=80 Identities=36% Similarity=0.658 Sum_probs=77.0
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|++||.|..+.+..+..++.++|+|||+|.+.++|+.|++.|||..+.|++|+|++++|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 46799999999999999999999999999999999888899999999999999999999999999999999999999987
No 4
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.93 E-value=6.5e-25 Score=117.47 Aligned_cols=83 Identities=27% Similarity=0.456 Sum_probs=77.7
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
....++|||+|||..+++++|+++|+.||.|..+.+..++.++.++|+|||+|.+.++|++|+..|||..++|+.|+|+|
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34467899999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+.+
T Consensus 84 a~~ 86 (88)
T d1rk8a_ 84 CFV 86 (88)
T ss_dssp SEE
T ss_pred ecC
Confidence 864
No 5
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=3.8e-25 Score=119.49 Aligned_cols=85 Identities=42% Similarity=0.642 Sum_probs=79.4
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
+.+..++|||+|||..+++++|+++|++||.|..+.+..++.++.++|||||+|.+.++|++|++.||+..+.|+.|+|+
T Consensus 5 ~~~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~ 84 (93)
T d1x5ua1 5 ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVN 84 (93)
T ss_dssp CCCTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 34456799999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred eccCC
Q 034004 102 YAHKD 106 (106)
Q Consensus 102 ~~~~~ 106 (106)
++++.
T Consensus 85 ~A~~~ 89 (93)
T d1x5ua1 85 KASAH 89 (93)
T ss_dssp ETTTT
T ss_pred EcCCC
Confidence 98763
No 6
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1e-24 Score=117.16 Aligned_cols=82 Identities=30% Similarity=0.492 Sum_probs=78.1
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
....+|||+|||.++++++|+++|+.||.|..+.+..++.++.++|||||.|.+.++|++|++.|+|..++|+.|+|+|+
T Consensus 6 ~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~a 85 (90)
T d2cq0a1 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWA 85 (90)
T ss_dssp SSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEee
Confidence 34578999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
+|
T Consensus 86 kp 87 (90)
T d2cq0a1 86 KP 87 (90)
T ss_dssp SC
T ss_pred eC
Confidence 86
No 7
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=5.2e-25 Score=118.08 Aligned_cols=81 Identities=36% Similarity=0.607 Sum_probs=77.5
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
..++|||+|||.++++++|+++|+.||.|..+.+..++.++.++|+|||.|.+.++|++|+..||+..++|+.|+|++++
T Consensus 4 ~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~ 83 (89)
T d2cqba1 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAK 83 (89)
T ss_dssp CCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 45789999999999999999999999999999999998889999999999999999999999999999999999999987
Q ss_pred C
Q 034004 105 K 105 (106)
Q Consensus 105 ~ 105 (106)
+
T Consensus 84 p 84 (89)
T d2cqba1 84 P 84 (89)
T ss_dssp C
T ss_pred C
Confidence 6
No 8
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=3e-24 Score=115.91 Aligned_cols=80 Identities=29% Similarity=0.533 Sum_probs=76.8
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
.+++|||+|||.++++++|+++|+++|.|..+.++.++.++.++|||||+|.+.++|+.|++.|||..++|+.|+|+|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 46799999999999999999999999999999999999899999999999999999999999999999999999999975
No 9
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=2.3e-24 Score=118.17 Aligned_cols=82 Identities=26% Similarity=0.458 Sum_probs=77.8
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+++++|||+|||.++++++|+++|+.||.+..+.+..++.++.++|+|||+|.+.++|+.|++.|||..+.|+.|+|+++
T Consensus 16 p~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a 95 (102)
T d2cpza1 16 PEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLK 95 (102)
T ss_dssp STTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 44578999999999999999999999999999999999889999999999999999999999999999999999999998
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
++
T Consensus 96 ~~ 97 (102)
T d2cpza1 96 RS 97 (102)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 10
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=3.5e-24 Score=113.45 Aligned_cols=79 Identities=37% Similarity=0.577 Sum_probs=74.3
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v 100 (106)
.+.+.++|||+|||..+++++|+++|++||.|..+.+..++.++.++|+|||+|.+.++|+.|+..||+..++|++|+|
T Consensus 5 ~p~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 5 NPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp SCCGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 3445678999999999999999999999999999999999888999999999999999999999999999999999987
No 11
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.92 E-value=1.9e-24 Score=116.86 Aligned_cols=85 Identities=24% Similarity=0.530 Sum_probs=77.4
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecC-CCCCccceEEEEeCCHHHHHHHHHHh-CCeeeCCeEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDR-VTGQSRGYGFVKFASEAAAGEAIKEM-DGLLLDGRNIR 99 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~~~~fv~f~~~~~a~~a~~~l-~~~~i~~~~i~ 99 (106)
.....++|||+|||..+++++|+.+|+.||.|..+.++.+. .+|.++|||||.|.+.++|++|+..| |+..++|++|.
T Consensus 4 ~~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~ 83 (94)
T d2cpha1 4 KKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLV 83 (94)
T ss_dssp CSSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEE
Confidence 34556789999999999999999999999999999998764 37899999999999999999999998 89999999999
Q ss_pred EEeccCC
Q 034004 100 VNYAHKD 106 (106)
Q Consensus 100 v~~~~~~ 106 (106)
|+|++++
T Consensus 84 V~~A~~~ 90 (94)
T d2cpha1 84 LEWADSE 90 (94)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 9999865
No 12
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=1.5e-24 Score=114.41 Aligned_cols=80 Identities=11% Similarity=0.244 Sum_probs=69.7
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|+++|.+..+.+..+...++++|+|||+|.+.++|++|++.|||..+.|++|+|++++|
T Consensus 1 d~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 1 ECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp SCEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 36899999999999999999999999998888877777899999999999999999999999999999999999999987
No 13
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.91 E-value=6e-24 Score=115.92 Aligned_cols=83 Identities=30% Similarity=0.483 Sum_probs=77.9
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
+...++|||+|||..+++++|+++|.+||.|..+.++.++.++.++|||||+|.+.++|+.|++.||+..++|+.|+|++
T Consensus 5 ~~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~ 84 (99)
T d1whwa_ 5 SSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLP 84 (99)
T ss_dssp CCSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 34567899999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+++
T Consensus 85 a~~ 87 (99)
T d1whwa_ 85 STI 87 (99)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 14
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.91 E-value=7.1e-24 Score=112.68 Aligned_cols=81 Identities=28% Similarity=0.576 Sum_probs=75.5
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCC--eEEEE
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDG--RNIRV 100 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~--~~i~v 100 (106)
....++|||+|||..+++++|+++|++||.|..+.+..++.++.++|+|||+|.+.++|++|++.||+..+.| ++|+|
T Consensus 3 ~~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V 82 (85)
T d1b7fa2 3 SIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSV 82 (85)
T ss_dssp TTTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEE
Confidence 3456789999999999999999999999999999999998899999999999999999999999999999876 88999
Q ss_pred Eec
Q 034004 101 NYA 103 (106)
Q Consensus 101 ~~~ 103 (106)
+||
T Consensus 83 ~~A 85 (85)
T d1b7fa2 83 RLA 85 (85)
T ss_dssp EEC
T ss_pred EEC
Confidence 986
No 15
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=2e-24 Score=114.88 Aligned_cols=79 Identities=29% Similarity=0.535 Sum_probs=76.1
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
++|||+|||..+++++|+++|++||.|..+.+..++.+|.++|+|||+|.+.++|+.|++.||+..+.|++|.|+++++
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~ 80 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASV 80 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 4799999999999999999999999999999999988999999999999999999999999999999999999999875
No 16
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=1.7e-23 Score=112.24 Aligned_cols=83 Identities=29% Similarity=0.520 Sum_probs=75.6
Q ss_pred cCCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEE
Q 034004 21 SDSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 21 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v 100 (106)
.+....++|||+|||.++++++|+++|+.||.|..+.+..+..+ .+++|||+|.+.++|+.|+..++|..+.|+.|+|
T Consensus 3 ~d~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~--~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v 80 (90)
T d2cqia1 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKV 80 (90)
T ss_dssp CCSCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCS--SCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCc--cceeeEEEECCHHHHHHHHHHcCCCEECCEEEEE
Confidence 45556789999999999999999999999999999999887644 4789999999999999999999999999999999
Q ss_pred EeccC
Q 034004 101 NYAHK 105 (106)
Q Consensus 101 ~~~~~ 105 (106)
.|+++
T Consensus 81 ~~a~~ 85 (90)
T d2cqia1 81 NWATT 85 (90)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99875
No 17
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.90 E-value=1.5e-23 Score=120.60 Aligned_cols=83 Identities=35% Similarity=0.601 Sum_probs=77.7
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
+...++|||+|||.++++++|+++|+.||.|..+.+..++.++.++|||||+|.+.++|+.|++.|||..++|++|+|++
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 33457899999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+.+
T Consensus 119 a~~ 121 (139)
T d1u6fa1 119 AAS 121 (139)
T ss_dssp SSC
T ss_pred cCC
Confidence 754
No 18
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.9e-23 Score=110.97 Aligned_cols=78 Identities=37% Similarity=0.662 Sum_probs=73.6
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCC--eEEEEEec
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDG--RNIRVNYA 103 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~--~~i~v~~~ 103 (106)
.++|||+|||..+++++|+++|++||.|..+.++.++.++.++|+|||+|.+.++|++|++.|||..+.| ++|+|+||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 4679999999999999999999999999999999998889999999999999999999999999999987 56999886
No 19
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=3.6e-23 Score=109.66 Aligned_cols=80 Identities=35% Similarity=0.583 Sum_probs=75.0
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+..++|||+|||.++++++|+++|+.||.|..+.+..++.++.++|+|||.|.+.+.|++|++ +++..+.|+.|+|+.|
T Consensus 4 e~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A 82 (84)
T d1l3ka1 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRA 82 (84)
T ss_dssp GGGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEEC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEee
Confidence 345789999999999999999999999999999999999899999999999999999999997 6899999999999876
Q ss_pred c
Q 034004 104 H 104 (106)
Q Consensus 104 ~ 104 (106)
.
T Consensus 83 ~ 83 (84)
T d1l3ka1 83 V 83 (84)
T ss_dssp C
T ss_pred e
Confidence 4
No 20
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=2.5e-24 Score=118.39 Aligned_cols=80 Identities=31% Similarity=0.707 Sum_probs=76.4
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|++||.|..+.+..++.+|.++|||||+|.+.++|+.|++.|++..+.|+.|+|+++.+
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 46899999999999999999999999999999999988999999999999999999999999999999999999999765
No 21
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=1.3e-23 Score=112.78 Aligned_cols=81 Identities=49% Similarity=0.782 Sum_probs=76.4
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
..++|||+|||.++++++|+++|++||.|..+.+..++.++.++|+|||+|.+.++|+.|++.|+|..+.|++|+|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 35679999999999999999999999999999998888889999999999999999999999999999999999999976
Q ss_pred C
Q 034004 105 K 105 (106)
Q Consensus 105 ~ 105 (106)
+
T Consensus 84 ~ 84 (90)
T d1x5sa1 84 K 84 (90)
T ss_dssp C
T ss_pred C
Confidence 5
No 22
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.90 E-value=3.1e-23 Score=108.56 Aligned_cols=76 Identities=29% Similarity=0.545 Sum_probs=72.9
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
+|||+|||.++++++|+++|++||.|..+.+..++ ++.++|+|||+|.+.++|+.|++.|||..+.|+.|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~-~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSS-CCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 59999999999999999999999999999999886 89999999999999999999999999999999999999875
No 23
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=8.4e-23 Score=109.48 Aligned_cols=81 Identities=30% Similarity=0.529 Sum_probs=74.5
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
....++|||+|||+++++++|+++|++||.|..+.++.++.+|.++|||||.|.+.++|++|++. ...++|+.|.|++
T Consensus 5 ~~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~ 82 (90)
T d2cqga1 5 VQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKL 82 (90)
T ss_dssp CCCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEEC
T ss_pred CcCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEe
Confidence 34567899999999999999999999999999999999988999999999999999999999984 5589999999998
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+.+
T Consensus 83 a~~ 85 (90)
T d2cqga1 83 PNS 85 (90)
T ss_dssp CCT
T ss_pred CCC
Confidence 765
No 24
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=4.7e-23 Score=113.05 Aligned_cols=82 Identities=46% Similarity=0.731 Sum_probs=75.3
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
+...++|||+|||..+++++|+++|+.||.|..+.++.++.++.++|+|||.|.+.++|++|++.+++ .+.|++|+|++
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 34457899999999999999999999999999999999988899999999999999999999998876 79999999998
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+..
T Consensus 86 a~~ 88 (103)
T d2cqda1 86 AYL 88 (103)
T ss_dssp STT
T ss_pred cCC
Confidence 753
No 25
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=8.8e-24 Score=115.56 Aligned_cols=79 Identities=27% Similarity=0.382 Sum_probs=74.9
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||..+++++|+++|+.||.|..+.++.++.+|.++|||||+|.+.++|++|+. |||..+.|+.|.|+++++
T Consensus 18 ~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~~ 96 (101)
T d2cq4a1 18 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQA 96 (101)
T ss_dssp HTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECCC
Confidence 4689999999999999999999999999999999998899999999999999999999996 999999999999998753
No 26
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.8e-22 Score=108.81 Aligned_cols=82 Identities=30% Similarity=0.641 Sum_probs=74.8
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
.....++|||+|||..+++++|+++|+.||.|..+.+..+.. .++|+|||+|.+.++|++|+..||+..++|+.|+|+
T Consensus 7 ~~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~--~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~ 84 (93)
T d2cq3a1 7 SKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER--GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVN 84 (93)
T ss_dssp CSCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTT--TTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhhcceeeecccccccc--CCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 445567899999999999999999999999999999988763 368999999999999999999999999999999999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
++++
T Consensus 85 ~A~~ 88 (93)
T d2cq3a1 85 NATA 88 (93)
T ss_dssp ECCS
T ss_pred ecCc
Confidence 9875
No 27
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=4.5e-23 Score=109.09 Aligned_cols=77 Identities=43% Similarity=0.710 Sum_probs=72.1
Q ss_pred EEEcCCCCCCCHHHHHHhhcccCCeeEE-EEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 29 l~v~nlp~~~~~~~l~~~f~~~g~i~~~-~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
|||+|||.++++++|+++|++||.+..+ .+..++.++.++|||||+|.+.++|+.|++.++|..++|++|+|+++.+
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~ 78 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFK 78 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecC
Confidence 7999999999999999999999998664 7788888899999999999999999999999999999999999999865
No 28
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=1.6e-22 Score=109.89 Aligned_cols=84 Identities=32% Similarity=0.568 Sum_probs=76.5
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhC------CeeeCC
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMD------GLLLDG 95 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~------~~~i~~ 95 (106)
+....++|||+|||.++++++|+++|++||.+..+.+..+..++.++|+|||+|.+.++|.+|++.++ |..+.|
T Consensus 4 ~~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~g 83 (98)
T d1x4ha1 4 DVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDG 83 (98)
T ss_dssp CCCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSS
T ss_pred CCCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECC
Confidence 34456789999999999999999999999999999999998889999999999999999999999886 667899
Q ss_pred eEEEEEeccC
Q 034004 96 RNIRVNYAHK 105 (106)
Q Consensus 96 ~~i~v~~~~~ 105 (106)
+.|+|+++.+
T Consensus 84 r~l~v~~a~~ 93 (98)
T d1x4ha1 84 RQLKVDLAVT 93 (98)
T ss_dssp CEEEEECCCC
T ss_pred EEEEEEECCC
Confidence 9999999764
No 29
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=1.4e-23 Score=109.61 Aligned_cols=76 Identities=39% Similarity=0.665 Sum_probs=72.5
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
++|||+|||.++++++|+++|++||.|..+.++.++.+++++|+|||+|.+.++|++|+. +++..++|+.|.|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 579999999999999999999999999999999999899999999999999999999997 6999999999999876
No 30
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.4e-22 Score=111.08 Aligned_cols=79 Identities=37% Similarity=0.603 Sum_probs=74.7
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|++||.|..+.+..++.++.++|||||+|.+.++|++|++ +++..+.|+.|.|+++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 4789999999999999999999999999999999998889999999999999999999997 799999999999998765
No 31
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.8e-22 Score=105.06 Aligned_cols=77 Identities=32% Similarity=0.578 Sum_probs=72.8
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
.++|||+|||+++++++|+++|++||.+..+.+..++.++.++|+|||.|.+.+++++|++ +++..++|+.|+|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 4689999999999999999999999999999999999899999999999999999999996 8999999999999865
No 32
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.5e-22 Score=110.61 Aligned_cols=84 Identities=24% Similarity=0.434 Sum_probs=75.5
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCee--------EEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeee
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEII--------EVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLL 93 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~--------~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i 93 (106)
++...++|||+|||..+++++|+++|+.||.+. .+.+..++.++.++++|||+|.+.++|..|++.|||..+
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 445678999999999999999999999999873 456667777899999999999999999999999999999
Q ss_pred CCeEEEEEeccC
Q 034004 94 DGRNIRVNYAHK 105 (106)
Q Consensus 94 ~~~~i~v~~~~~ 105 (106)
.|+.|+|+++++
T Consensus 84 ~gr~i~V~~a~~ 95 (101)
T d2cpea1 84 QGSKLKVSLARK 95 (101)
T ss_dssp TTEECEEECSSC
T ss_pred CCEEEEEEEcCC
Confidence 999999999865
No 33
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.89 E-value=1e-22 Score=108.13 Aligned_cols=77 Identities=30% Similarity=0.572 Sum_probs=71.0
Q ss_pred EEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCC---CccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTG---QSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 29 l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~---~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
|||+|||.++++++|+++|++||.|..+.+..++.++ .++|||||+|.+.++|++|++.|||..++|+.|+|+++++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999998876554 3589999999999999999999999999999999999764
No 34
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.6e-22 Score=108.19 Aligned_cols=78 Identities=37% Similarity=0.698 Sum_probs=72.3
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
..+|||+|||.++++++|+++|+.||.|..+.+..+. +.++|||||+|.+.++|++|++.|||..++|++|.|+++++
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~--~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~ 85 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 85 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBT--TBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeec--CCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 4579999999999999999999999999999998875 33679999999999999999999999999999999999875
No 35
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.88 E-value=1.5e-22 Score=107.73 Aligned_cols=80 Identities=25% Similarity=0.422 Sum_probs=69.8
Q ss_pred CCceEEEcCCCCCCC-HHHHHHhhcccCCeeEEEEeec-CCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 25 SRTKLFIGGLSYDTN-ETVLKDAFGQHGEIIEVKVICD-RVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~-~~~l~~~f~~~g~i~~~~~~~~-~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
..++|||+|||.+++ ++.|+++|++||.|..+.+... ..++.++|+|||+|.+.++|++|++ +|+..++|+.|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 467899999999875 6679999999999999998764 4578899999999999999999996 999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+++
T Consensus 82 a~~ 84 (86)
T d2ghpa3 82 ADK 84 (86)
T ss_dssp CCC
T ss_pred cCC
Confidence 875
No 36
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=1.1e-22 Score=105.64 Aligned_cols=75 Identities=39% Similarity=0.700 Sum_probs=70.7
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
.|||+|||+++++++|+++|++||.|..+.+..++.+++++|+|||+|.+.++|++|++ +++..+.|+.|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 48999999999999999999999999999999999899999999999999999999997 7889999999998653
No 37
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.88 E-value=4.5e-22 Score=105.18 Aligned_cols=78 Identities=24% Similarity=0.446 Sum_probs=70.0
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeee-CCeEEEEE
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLL-DGRNIRVN 101 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i-~~~~i~v~ 101 (106)
.++.++|||+|||.++++++|..+|+.||.+..+.+..+ .+|+|||+|.+.++|+.|+..|+|..+ +|++|+|+
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~-----~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~ 79 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPN-----RHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKIT 79 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTT-----TCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecc-----cceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEE
Confidence 345679999999999999999999999999999988654 357999999999999999999999988 56899999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
||++
T Consensus 80 ~akk 83 (83)
T d2b0ga1 80 FAKK 83 (83)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9975
No 38
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=5.4e-22 Score=110.51 Aligned_cols=78 Identities=24% Similarity=0.399 Sum_probs=71.7
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+..++|||+|||..+++++|+++|+.||.|..+.+..+ +.++|+|||+|.+.++|..|++.|||..++|+.|.|.++
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~---~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a 81 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNT---PETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYY 81 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECS---TTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEEC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeeccccc---CCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 45689999999999999999999999999999988654 456899999999999999999999999999999999987
Q ss_pred c
Q 034004 104 H 104 (106)
Q Consensus 104 ~ 104 (106)
.
T Consensus 82 ~ 82 (114)
T d2f9da1 82 N 82 (114)
T ss_dssp C
T ss_pred C
Confidence 5
No 39
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=4.1e-22 Score=107.96 Aligned_cols=76 Identities=22% Similarity=0.637 Sum_probs=70.8
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+..++|||+|||..+++++|+++|++||.|..+.+..+ +|+|||+|.+.++|++|+..|+|..++|+.|+|+|+
T Consensus 16 ~~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~~------kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~a 89 (96)
T d1x4ga1 16 PKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 89 (96)
T ss_dssp SSCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEec------ceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 44578999999999999999999999999999998765 579999999999999999999999999999999998
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
++
T Consensus 90 k~ 91 (96)
T d1x4ga1 90 KE 91 (96)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 40
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=8.5e-22 Score=106.51 Aligned_cols=81 Identities=23% Similarity=0.454 Sum_probs=72.8
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
.....++|||+|||.++++++|+++|+.||.+..+.+... +.++++|||+|.+.++|+.|++.||+..+.|++|+|+
T Consensus 10 ~~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~---~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~ 86 (95)
T d1x4aa1 10 AGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNR---RGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVE 86 (95)
T ss_dssp CCCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCS---SSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEeccc---ccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 4456678999999999999999999999999988877543 4468999999999999999999999999999999999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
++++
T Consensus 87 ~a~~ 90 (95)
T d1x4aa1 87 FPRS 90 (95)
T ss_dssp CCCC
T ss_pred eccC
Confidence 9875
No 41
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=3.3e-23 Score=113.43 Aligned_cols=82 Identities=22% Similarity=0.366 Sum_probs=76.3
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
.+.++|||+|||..+++++|+++|+.||.+..+.+..+..++.++++|||.|.+.++|+.|++.|||..+.|++|+|+|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 45679999999999999999999999999988888777778899999999999999999999999999999999999998
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
++
T Consensus 96 k~ 97 (102)
T d2cpxa1 96 KN 97 (102)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 42
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.6e-22 Score=109.70 Aligned_cols=82 Identities=22% Similarity=0.421 Sum_probs=74.7
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
....++|||+|||.++++++|+++|+.||.|..+.+..+. ++.++|||||+|.+.++|++|++.|||..+.|+++.|.+
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~-~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~ 93 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAP 93 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECS-SSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCC
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeeccc-ccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCC
Confidence 3446789999999999999999999999999999888875 788999999999999999999999999999999888877
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
++|
T Consensus 94 ~~P 96 (101)
T d1x5oa1 94 TEP 96 (101)
T ss_dssp SSC
T ss_pred CCC
Confidence 665
No 43
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=1.1e-22 Score=105.63 Aligned_cols=75 Identities=28% Similarity=0.506 Sum_probs=70.3
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+|||+|||+++++++|+++|++||.|..+.++.++.+++++|||||+|.+.++|++|++. ++..++|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~~-~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK-KYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTTC-SSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHhh-CCCEECCEEeEEEEC
Confidence 489999999999999999999999999999999998999999999999999999999974 677899999999864
No 44
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.87 E-value=4.9e-23 Score=110.66 Aligned_cols=82 Identities=27% Similarity=0.412 Sum_probs=73.6
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
++...++|||+|||..+++++|+++|+.||.+..+.+..+ .+|.++|+|||+|.+.++|++|++ +|+..+.|+.|+|+
T Consensus 9 ~~~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~-~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~ 86 (91)
T d1fjeb1 9 ESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDV-RTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLE 86 (91)
T ss_dssp SCSSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEE-EEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEE
T ss_pred CCCCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeec-CCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEE
Confidence 3445678999999999999999999999999888777654 488899999999999999999996 99999999999999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
++++
T Consensus 87 ~ak~ 90 (91)
T d1fjeb1 87 KPKG 90 (91)
T ss_dssp CCCC
T ss_pred ecCC
Confidence 9875
No 45
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=2.8e-22 Score=104.09 Aligned_cols=75 Identities=29% Similarity=0.533 Sum_probs=71.3
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+|||+|||.++++++|+++|+.||.+..+.+..++.++.++++|||+|.+.++|++|++ +|+..++|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 48999999999999999999999999999998888889999999999999999999997 9999999999999875
No 46
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.87 E-value=5.7e-22 Score=105.39 Aligned_cols=80 Identities=15% Similarity=0.206 Sum_probs=70.8
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEE-EEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~-~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
.++.++|||+|||.++++++|+++|+.+|.+... .+..+ .++.++|+|||+|.+.++|++|++.||+..+.|++|+|+
T Consensus 6 ~p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~-~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~ 84 (86)
T d2cqpa1 6 KPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYN-EKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLV 84 (86)
T ss_dssp CCSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEEC-SSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeC-CCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEE
Confidence 3456789999999999999999999999988653 44444 489999999999999999999999999999999999998
Q ss_pred ec
Q 034004 102 YA 103 (106)
Q Consensus 102 ~~ 103 (106)
++
T Consensus 85 l~ 86 (86)
T d2cqpa1 85 LG 86 (86)
T ss_dssp ES
T ss_pred EC
Confidence 75
No 47
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.7e-21 Score=102.55 Aligned_cols=77 Identities=16% Similarity=0.294 Sum_probs=72.0
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
.++|||+|||.++++++|+.+|+.+|.+..+.+..+. ++.++|+|||+|.+.++|++|++ +++..+.|+.|.|.+.+
T Consensus 6 ~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~-~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTL-HKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp TTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECT-TCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeec-cCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4689999999999999999999999999999998876 88999999999999999999997 79999999999999864
No 48
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.87 E-value=9.6e-22 Score=106.50 Aligned_cols=78 Identities=31% Similarity=0.523 Sum_probs=70.4
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
....++|||+|||.++++++|+++|+.+|.+..+.. ++.++++|||+|.+.++|++|++.||+..+.|++|+|+|
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~-----~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~ 87 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ-----DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY 87 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEE-----TTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeee-----cCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 344689999999999999999999999998866543 567899999999999999999999999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+.+
T Consensus 88 a~~ 90 (96)
T d1fjca_ 88 TGE 90 (96)
T ss_dssp CSS
T ss_pred eCC
Confidence 875
No 49
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=1.8e-21 Score=103.85 Aligned_cols=77 Identities=17% Similarity=0.332 Sum_probs=68.7
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeee-CCeEEEEEec
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLL-DGRNIRVNYA 103 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i-~~~~i~v~~~ 103 (106)
+.++|||+|||..+++++|+++|+.+|.+..+.+...+ .+++|||+|.+.++|.+|+..|||..+ +|+.|+|+|+
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~----~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~s 84 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQK----DRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFS 84 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSS----STTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeec----ccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeC
Confidence 45789999999999999999999999999877665443 578999999999999999999999988 5899999999
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
++
T Consensus 85 k~ 86 (88)
T d2adca2 85 KS 86 (88)
T ss_dssp SS
T ss_pred CC
Confidence 86
No 50
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.86 E-value=2.6e-21 Score=102.80 Aligned_cols=74 Identities=32% Similarity=0.609 Sum_probs=69.0
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|++||.|..+.+..+ +++|||+|.+.++|++|++.|||..++|+.|+|+|+.+
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~~------k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~ 81 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACH 81 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEETT------TTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeecc------cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 467999999999999999999999999999988654 47999999999999999999999999999999999875
No 51
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=2e-21 Score=103.87 Aligned_cols=76 Identities=21% Similarity=0.406 Sum_probs=68.5
Q ss_pred CceEEEcCCCCCCCHHHH---HHhhcccCCeeEEEEeecCCCCC---ccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEE
Q 034004 26 RTKLFIGGLSYDTNETVL---KDAFGQHGEIIEVKVICDRVTGQ---SRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIR 99 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l---~~~f~~~g~i~~~~~~~~~~~~~---~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~ 99 (106)
..+|||+|||+.+++++| .++|++||.|..+.+..++.++. +.|+|||+|.+.++|++|++.|||..++|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 457999999999999999 67899999999999988875544 458999999999999999999999999999999
Q ss_pred EE
Q 034004 100 VN 101 (106)
Q Consensus 100 v~ 101 (106)
++
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 86
No 52
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1e-20 Score=100.46 Aligned_cols=74 Identities=30% Similarity=0.445 Sum_probs=67.8
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccC
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHK 105 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~ 105 (106)
.++|||+|||.++++++|+++|+.||.+..+.+.. ++|+|||+|.+.++|+.|+..|||..+.|+.|+|+|++|
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~~~------~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP 81 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERVKK------IRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKP 81 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEEEE------CSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEEcc------ccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccC
Confidence 46899999999999999999999999987776644 458999999999999999999999999999999999876
No 53
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=5.7e-21 Score=104.76 Aligned_cols=80 Identities=24% Similarity=0.437 Sum_probs=70.3
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecC-CCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDR-VTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~-~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
.+.++|||+|||..+++++|+++|+.|| +..+.++.++ .++.++|+|||+|.+.++|++|+. +|+..++|+.|+|.+
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~~-~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS-LNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG-GGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHHH-cCCCEECCEEEEEEE
Confidence 4568999999999999999999999998 6677666554 467899999999999999987775 999999999999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+++
T Consensus 91 a~~ 93 (104)
T d1wi8a_ 91 ADQ 93 (104)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 54
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=3.1e-21 Score=106.57 Aligned_cols=75 Identities=23% Similarity=0.418 Sum_probs=68.8
Q ss_pred CceEEEcCCCC-CCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 26 RTKLFIGGLSY-DTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 26 ~~~l~v~nlp~-~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
.++|||+|||+ .+++++|+++|+.||.|..+.+..++ +|+|||+|.+.++|++|++.|||..+.|+.|+|++++
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~-----kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~ 76 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK-----KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSK 76 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTT-----SCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCS
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecc-----cceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECC
Confidence 57899999965 59999999999999999999997764 6799999999999999999999999999999999986
Q ss_pred C
Q 034004 105 K 105 (106)
Q Consensus 105 ~ 105 (106)
.
T Consensus 77 ~ 77 (109)
T d2adca1 77 H 77 (109)
T ss_dssp C
T ss_pred C
Confidence 4
No 55
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=5.1e-21 Score=100.19 Aligned_cols=75 Identities=27% Similarity=0.493 Sum_probs=68.1
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
...++|||+|++ +++++|+++|++||.|..+.+..+ +++|||+|.+.++|..|+..|||..++|+.|+|+|+
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~~------~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a 74 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDPP------RNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIA 74 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEETT------TTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeeeccC------CCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEe
Confidence 456789999996 899999999999999999988654 479999999999999999999999999999999999
Q ss_pred cCC
Q 034004 104 HKD 106 (106)
Q Consensus 104 ~~~ 106 (106)
++.
T Consensus 75 ~~~ 77 (79)
T d2bz2a1 75 RKQ 77 (79)
T ss_dssp CSS
T ss_pred cCC
Confidence 864
No 56
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.85 E-value=1.8e-21 Score=107.83 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=68.4
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
+.++|||+|||..+++++|+++|+.||.|..+.+.. .+++|||.|.+.++|++|++.|||..+.|++|.|+|+.
T Consensus 9 ~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~~------~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~ 82 (111)
T d1whxa_ 9 SKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPE------GGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAP 82 (111)
T ss_dssp EEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECCS------SSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEE
T ss_pred CCCEEEEECCCCCCCHHHHHhhhhccCCccEEEeec------cCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECC
Confidence 357899999999999999999999999999987732 46899999999999999999999999999999999875
Q ss_pred C
Q 034004 105 K 105 (106)
Q Consensus 105 ~ 105 (106)
.
T Consensus 83 ~ 83 (111)
T d1whxa_ 83 I 83 (111)
T ss_dssp T
T ss_pred C
Confidence 4
No 57
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=9.8e-22 Score=101.27 Aligned_cols=71 Identities=31% Similarity=0.514 Sum_probs=67.7
Q ss_pred EEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEE
Q 034004 29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIR 99 (106)
Q Consensus 29 l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~ 99 (106)
|||+|||.++++++|+++|++||.+..+.+..++.++.++|+|||+|.+.++|++|++.|||..+.|+.++
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 79999999999999999999999999999999988999999999999999999999999999999998764
No 58
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.2e-20 Score=100.57 Aligned_cols=75 Identities=17% Similarity=0.281 Sum_probs=65.0
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
+.++|||+|||..+++++|+++|++|| +..+.+ +..+++|||+|.+.++|++|++.||+..+.|++|+|++++
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~------~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~ 76 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV------DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQP 76 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE------EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcC-ceeeee------eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 456899999999999999999999999 222333 2357899999999999999999999999999999999986
Q ss_pred CC
Q 034004 105 KD 106 (106)
Q Consensus 105 ~~ 106 (106)
.+
T Consensus 77 ~~ 78 (88)
T d1wg1a_ 77 TD 78 (88)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 59
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.6e-20 Score=102.97 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=73.8
Q ss_pred cCCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEE
Q 034004 21 SDSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 21 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v 100 (106)
++......|||+|||+++++++|+++|..+|.+....+.....++.++|+|||+|.+.++|++|++ +|+..|.|+.|+|
T Consensus 10 ~~~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V 88 (104)
T d1wg5a_ 10 PDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEI 88 (104)
T ss_dssp SSCSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEE
T ss_pred CCCCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEE
Confidence 344556679999999999999999999999988776666666689999999999999999999996 8999999999999
Q ss_pred EeccC
Q 034004 101 NYAHK 105 (106)
Q Consensus 101 ~~~~~ 105 (106)
.++.+
T Consensus 89 ~~~~~ 93 (104)
T d1wg5a_ 89 FKSSR 93 (104)
T ss_dssp EEECT
T ss_pred EECCH
Confidence 98765
No 60
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=4.7e-21 Score=102.80 Aligned_cols=78 Identities=27% Similarity=0.518 Sum_probs=69.1
Q ss_pred CceEEEcCCCCCCCHHHHHH----hhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 26 RTKLFIGGLSYDTNETVLKD----AFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~----~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
.++|||+|||..+++++|++ +|++||.|..+.+.. ++.++|+|||+|.+.++|++|+..+||..+.|+.|+|+
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~---~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~ 79 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSR---SLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQ 79 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCH---HHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEee---eccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEE
Confidence 57899999999999988864 579999999887643 45678999999999999999999999999999999999
Q ss_pred eccCC
Q 034004 102 YAHKD 106 (106)
Q Consensus 102 ~~~~~ 106 (106)
|++++
T Consensus 80 ~ak~~ 84 (91)
T d1nu4a_ 80 YAKTD 84 (91)
T ss_dssp ECSSC
T ss_pred EeCCC
Confidence 98753
No 61
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.2e-20 Score=102.48 Aligned_cols=75 Identities=25% Similarity=0.552 Sum_probs=67.3
Q ss_pred CCCCceEEEcCCC-CCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 23 SNSRTKLFIGGLS-YDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 23 ~~~~~~l~v~nlp-~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
....++|||+||| ..+++++|+++|++||.|..+.+ +++||||+|.+.++|++|++.|||..+.|+.|+|+
T Consensus 12 ~~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i--------~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~ 83 (98)
T d1wf2a_ 12 RSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV--------HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDIN 83 (98)
T ss_dssp SSCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE--------ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEE
T ss_pred CCCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE--------eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEE
Confidence 3445679999997 56888999999999999999988 35799999999999999999999999999999999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
++++
T Consensus 84 ~a~~ 87 (98)
T d1wf2a_ 84 LAAE 87 (98)
T ss_dssp ETTS
T ss_pred ECCC
Confidence 9864
No 62
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=2e-20 Score=96.99 Aligned_cols=74 Identities=22% Similarity=0.220 Sum_probs=67.3
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
++|||+|||.++++++|+++|+.+|.|..+.+..++.. .+++|||+|.+.++|++|+. +++..++|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~--~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKK--NFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTS--SSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccc--cceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 47999999999999999999999999999999888633 45799999999999999996 8999999999999864
No 63
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.84 E-value=1.6e-20 Score=101.78 Aligned_cols=77 Identities=30% Similarity=0.576 Sum_probs=69.4
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCC--eEEEEE
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDG--RNIRVN 101 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~--~~i~v~ 101 (106)
.+.++|||+|||.++++++|+++|++||.|..+.+..+ +++|||+|.+.++|+.|++.||+..+.| ++|+|+
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~~------~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~ 88 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKG------DSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVD 88 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECSS------SCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEE
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeecc------ccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEE
Confidence 44678999999999999999999999999999988654 4799999999999999999999999976 589999
Q ss_pred eccCC
Q 034004 102 YAHKD 106 (106)
Q Consensus 102 ~~~~~ 106 (106)
|++++
T Consensus 89 ~ak~~ 93 (97)
T d1whya_ 89 FAKSG 93 (97)
T ss_dssp ECCCC
T ss_pred eCCCC
Confidence 98864
No 64
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=5.3e-20 Score=98.04 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=69.5
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHh--CCeeeCCeEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM--DGLLLDGRNIR 99 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l--~~~~i~~~~i~ 99 (106)
+.++.++|||+|||..+++++|+++|++||.|..+.+..+ +++|||+|.+.++|++|+..+ ++..+.|++|+
T Consensus 4 ~~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~~------~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~ 77 (88)
T d2cq1a1 4 DGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG------KNQAFLELATEEAAITMVNYYSAVTPHLRNQPIY 77 (88)
T ss_dssp CSSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCEETTEECE
T ss_pred CCCCCCEEEEeCCCCCCCHHHHHHHHhccccccccccccc------ceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEE
Confidence 4567789999999999999999999999999999988654 379999999999999999865 57789999999
Q ss_pred EEeccC
Q 034004 100 VNYAHK 105 (106)
Q Consensus 100 v~~~~~ 105 (106)
|+|++.
T Consensus 78 v~~sk~ 83 (88)
T d2cq1a1 78 IQYSNH 83 (88)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 999875
No 65
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=1.1e-20 Score=104.27 Aligned_cols=80 Identities=15% Similarity=0.344 Sum_probs=71.1
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeee--CCeEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLL--DGRNIR 99 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i--~~~~i~ 99 (106)
.+.+..+|||+|||..+++++|+++|++||.|..+.+..++ .+|+|||+|.+.++|+.|+..|||..+ .+.+|+
T Consensus 3 ~~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~----~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~ 78 (108)
T d2adba1 3 GQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN----NQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLR 78 (108)
T ss_dssp CCCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEET----TEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCE
T ss_pred CCCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeC----CCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEE
Confidence 34556689999999999999999999999999999888765 478999999999999999999999988 468899
Q ss_pred EEeccC
Q 034004 100 VNYAHK 105 (106)
Q Consensus 100 v~~~~~ 105 (106)
|.++++
T Consensus 79 v~~s~~ 84 (108)
T d2adba1 79 IDFSKL 84 (108)
T ss_dssp EEECSS
T ss_pred EEecCC
Confidence 998764
No 66
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.83 E-value=5.1e-20 Score=95.41 Aligned_cols=71 Identities=23% Similarity=0.312 Sum_probs=63.3
Q ss_pred EEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEeccCC
Q 034004 29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAHKD 106 (106)
Q Consensus 29 l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~~~ 106 (106)
|||+|||.++++++|+++|++|| +..+.+ +..+|+|||+|.+.++|++|+..|||..+.|++|+|++++.|
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~------~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV------DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE------ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee------cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999998 444333 335789999999999999999999999999999999998765
No 67
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=7.9e-21 Score=99.66 Aligned_cols=73 Identities=30% Similarity=0.510 Sum_probs=65.2
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCe-eeCCeEEEEEeccC
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGL-LLDGRNIRVNYAHK 105 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~-~i~~~~i~v~~~~~ 105 (106)
.+|||+|||.++++++|+++|++||.+....+.. .+|+|||+|.+.++|+.|++.|||. .+.|++|+|+++.+
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~~------~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~ 75 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLL------KSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVS 75 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCEEE------ETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEEec------ccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCC
Confidence 3699999999999999999999999887655544 3589999999999999999999986 69999999999875
No 68
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-20 Score=101.59 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=70.4
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCC-eeEEEEeecC-CCCCccceEEEEeCCHHHHHHHHHHhCCe--eeCCeEEEEEe
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGE-IIEVKVICDR-VTGQSRGYGFVKFASEAAAGEAIKEMDGL--LLDGRNIRVNY 102 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~-i~~~~~~~~~-~~~~~~~~~fv~f~~~~~a~~a~~~l~~~--~i~~~~i~v~~ 102 (106)
++|||+|||..+++++|+++|+.+|. +..+.+..+. ..+.++|||||+|.+.++|..|++.|++. .+.|+.|+|+|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 57999999999999999999999996 8888888765 35789999999999999999999998654 46799999999
Q ss_pred ccC
Q 034004 103 AHK 105 (106)
Q Consensus 103 ~~~ 105 (106)
+++
T Consensus 82 A~p 84 (96)
T d2disa1 82 AEP 84 (96)
T ss_dssp SCS
T ss_pred cCC
Confidence 876
No 69
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.8e-20 Score=102.46 Aligned_cols=81 Identities=20% Similarity=0.271 Sum_probs=71.0
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
......+|||+|||+++++++|+++|..+| +..+.+..+. ++..+|+|||+|.+.++|++|++ +|+..|+|+.|+|.
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~-~~~v~~~~~~-~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~ 87 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLN-PMRVHIEIGP-DGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELF 87 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCC-CSEEEEEESS-SSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccC-cceeeeEEec-CCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEE
Confidence 344567899999999999999999999997 5567777765 68899999999999999999987 89999999999999
Q ss_pred eccC
Q 034004 102 YAHK 105 (106)
Q Consensus 102 ~~~~ 105 (106)
++.+
T Consensus 88 ~s~~ 91 (102)
T d1weza_ 88 LNST 91 (102)
T ss_dssp EECC
T ss_pred EcCC
Confidence 8754
No 70
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=1.6e-20 Score=102.78 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=70.2
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
....+|||+|||.++++++|+++|..+|.+....+.....+|.++|+|||+|.+.++|++|+. +|+..|.|+.|.|.++
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 445679999999999999999999999988764444444589999999999999999999996 8999999999999876
Q ss_pred c
Q 034004 104 H 104 (106)
Q Consensus 104 ~ 104 (106)
.
T Consensus 85 ~ 85 (103)
T d2cpya1 85 T 85 (103)
T ss_dssp C
T ss_pred C
Confidence 4
No 71
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.9e-20 Score=99.85 Aligned_cols=75 Identities=24% Similarity=0.473 Sum_probs=66.4
Q ss_pred CCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
...++|||+|||..+++++|+++|++||.+..+.+.. .+++||||+|.+.++|++|+. ++..++|+.|.|+++
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~-----~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a 75 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNA 75 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCS-----SCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEee-----ccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeC
Confidence 4567999999999999999999999999999887643 357899999999999999986 788899999999987
Q ss_pred cC
Q 034004 104 HK 105 (106)
Q Consensus 104 ~~ 105 (106)
.+
T Consensus 76 ~~ 77 (88)
T d1wf0a_ 76 EP 77 (88)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 72
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=1.3e-20 Score=104.56 Aligned_cols=84 Identities=21% Similarity=0.304 Sum_probs=72.7
Q ss_pred ccCCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEE
Q 034004 20 LSDSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIR 99 (106)
Q Consensus 20 ~~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~ 99 (106)
..+....++|||+|||+.+++++|+++|+.+|.+....+.....+|.++|+|||+|.+.++|++|+. +|+..|+|+.|.
T Consensus 12 ~~~~~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~ 90 (112)
T d1wela1 12 RSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQ 90 (112)
T ss_dssp SSCCCCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBE
T ss_pred CCCCCCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEE
Confidence 3344556789999999999999999999999988665455555589999999999999999999996 899999999999
Q ss_pred EEecc
Q 034004 100 VNYAH 104 (106)
Q Consensus 100 v~~~~ 104 (106)
|..+.
T Consensus 91 V~~~~ 95 (112)
T d1wela1 91 VHPIT 95 (112)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 98764
No 73
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=1.7e-19 Score=96.28 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=69.7
Q ss_pred cCCCCCceEEEcCCCCC-CCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHh--CCeeeCCeE
Q 034004 21 SDSNSRTKLFIGGLSYD-TNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM--DGLLLDGRN 97 (106)
Q Consensus 21 ~~~~~~~~l~v~nlp~~-~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l--~~~~i~~~~ 97 (106)
...+++++|||+|||.. +++++|.++|++||.|..+.+..++ ++|||+|.+.++|+.|+..+ ++..+.|++
T Consensus 3 ~~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~~k------~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~ 76 (89)
T d1x4da1 3 GRVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILNKI------NEAFIEMATTEDAQAAVDYYTTTPALVFGKP 76 (89)
T ss_dssp CCCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECSSS------SCEEEEESSHHHHHHHHHHHHHSCCEETTEE
T ss_pred CCCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeeccc------eEEEEEEcchhhHHHHHHHHhhCCCccCCce
Confidence 34567789999999986 7899999999999999999887654 58999999999999999866 677899999
Q ss_pred EEEEeccC
Q 034004 98 IRVNYAHK 105 (106)
Q Consensus 98 i~v~~~~~ 105 (106)
|+|+|+++
T Consensus 77 l~V~~s~~ 84 (89)
T d1x4da1 77 VRVHLSQK 84 (89)
T ss_dssp CEEEEECC
T ss_pred EEEEECCC
Confidence 99999875
No 74
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.81 E-value=7.5e-20 Score=99.24 Aligned_cols=77 Identities=18% Similarity=0.315 Sum_probs=68.8
Q ss_pred cCCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEE
Q 034004 21 SDSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 21 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v 100 (106)
+.....++|||+|||..+++++|+++|+.||.|..+.+.. +|+|||+|.+.++|++|++.||+..+.|+.|+|
T Consensus 10 ~~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~~-------~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v 82 (98)
T d1wg4a_ 10 PTRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQK-------DGMGMVEYLRKEDMEYALRKLDDTKFRSHEGET 82 (98)
T ss_dssp CCCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEET-------TTEEEEEESSHHHHHHHHHHHSSEEEECTTSCE
T ss_pred CCCCCCCEEEEECCCCCCCHHHHHHHHHhhcccccccccc-------cceEEEEECCHHHHHHHHHHhCCCEeCCeEEEE
Confidence 3344567899999999999999999999999999988753 379999999999999999999999999999999
Q ss_pred Eecc
Q 034004 101 NYAH 104 (106)
Q Consensus 101 ~~~~ 104 (106)
.+.+
T Consensus 83 ~~~~ 86 (98)
T d1wg4a_ 83 SYIR 86 (98)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 75
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=5e-19 Score=96.89 Aligned_cols=77 Identities=19% Similarity=0.253 Sum_probs=68.1
Q ss_pred CCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHh--CCeeeCCeEEEE
Q 034004 23 SNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM--DGLLLDGRNIRV 100 (106)
Q Consensus 23 ~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l--~~~~i~~~~i~v 100 (106)
.++..+|||+|||..+++++|..+|+.||.|..+.+.+. +++|||+|.+.++|+.|+..+ ++..+.|++|+|
T Consensus 12 ~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~~------k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v 85 (104)
T d1wexa_ 12 VSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPF------KRQALVEFENIDSAKECVTFAADVPVYIAGQQAFF 85 (104)
T ss_dssp CCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEETT------TTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEec------ceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEE
Confidence 345679999999999999999999999999999988654 479999999999999999877 556789999999
Q ss_pred EeccC
Q 034004 101 NYAHK 105 (106)
Q Consensus 101 ~~~~~ 105 (106)
+|++.
T Consensus 86 ~~s~~ 90 (104)
T d1wexa_ 86 NYSTS 90 (104)
T ss_dssp EECSS
T ss_pred EEcCC
Confidence 99864
No 76
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.7e-20 Score=99.77 Aligned_cols=70 Identities=21% Similarity=0.364 Sum_probs=63.7
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
+|||+|||.++++++|+++|+.||.|..+.+..+ |+|||+|.+.++|++|+..|||..+.|+.|+|.+++
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~~~-------g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~ 71 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRD-------GTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIR 71 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEECTT-------SEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccccc-------ceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEe
Confidence 5999999999999999999999999999887543 799999999999999999999999999988876643
No 77
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=1.9e-18 Score=102.61 Aligned_cols=84 Identities=30% Similarity=0.516 Sum_probs=77.0
Q ss_pred cCCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEE
Q 034004 21 SDSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 21 ~~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v 100 (106)
......++|||+|||..+++++|+++|+.||.+..+.+..+..++.++|+|||+|.+.++|++|++ +++..+.|+.|+|
T Consensus 92 ~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~G~~i~V 170 (183)
T d1u1qa_ 92 GAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEV 170 (183)
T ss_dssp TTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEETTEEEEE
T ss_pred ccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeECCEEEEE
Confidence 344556899999999999999999999999999999999998889999999999999999999997 7889999999999
Q ss_pred EeccC
Q 034004 101 NYAHK 105 (106)
Q Consensus 101 ~~~~~ 105 (106)
+++.+
T Consensus 171 ~~A~~ 175 (183)
T d1u1qa_ 171 RKALS 175 (183)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 98743
No 78
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=3.5e-19 Score=96.72 Aligned_cols=78 Identities=13% Similarity=0.240 Sum_probs=68.5
Q ss_pred CCCCCceEEEcCCCCC-CCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHH--HhCCeeeCCeEE
Q 034004 22 DSNSRTKLFIGGLSYD-TNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK--EMDGLLLDGRNI 98 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~-~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~--~l~~~~i~~~~i 98 (106)
.....++|||+|||.. +++++|.++|++||.|..+.+..+ +++|||+|.+.++|.+|++ .+++..+.|++|
T Consensus 14 ~~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~~------k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l 87 (99)
T d1x4fa1 14 KQELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMRM------KSQAFIEMETREDAMAMVDHCLKKALWFQGRCV 87 (99)
T ss_dssp SSCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEETT------TTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCC
T ss_pred CCCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEeec------CCcEEEEecchHHHHHHHHHHhcCCceECCEEE
Confidence 3445689999999985 899999999999999999988654 4799999999999999997 468888999999
Q ss_pred EEEeccC
Q 034004 99 RVNYAHK 105 (106)
Q Consensus 99 ~v~~~~~ 105 (106)
+|+++++
T Consensus 88 ~V~~s~~ 94 (99)
T d1x4fa1 88 KVDLSEK 94 (99)
T ss_dssp EEEEECS
T ss_pred EEEEcCC
Confidence 9999864
No 79
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.73 E-value=3.3e-18 Score=93.56 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=66.6
Q ss_pred CCCceEEEcCCCCCCCH-----HHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEE
Q 034004 24 NSRTKLFIGGLSYDTNE-----TVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNI 98 (106)
Q Consensus 24 ~~~~~l~v~nlp~~~~~-----~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i 98 (106)
.+..+|||+||+..+.. +.|+.+|+.||.|..+.+.. .+++|||+|.+.++|++|+..|||..++|++|
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~k------~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l 76 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYFK------SFKRVRINFSNPLSAADARLRLHKTEFLGKEM 76 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEET------TTTEEEEECSSTTHHHHHHHTSTTSEETTEEC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEec------CCCEEEEEECCHHHHHHHHHHhcccccCCCEe
Confidence 45678999999998632 56999999999999998864 35799999999999999999999999999999
Q ss_pred EEEeccC
Q 034004 99 RVNYAHK 105 (106)
Q Consensus 99 ~v~~~~~ 105 (106)
+|.|+++
T Consensus 77 ~v~~a~~ 83 (104)
T d1weya_ 77 KLYFAQT 83 (104)
T ss_dssp EEECCCC
T ss_pred EEeeccc
Confidence 9999864
No 80
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=5.7e-20 Score=98.30 Aligned_cols=77 Identities=18% Similarity=0.486 Sum_probs=65.6
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEe-----ecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEE
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVI-----CDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVN 101 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~-----~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~ 101 (106)
++|||+|||..+++++|+++|+.+|.+..+.+. .+..++.++|+|||+|.+.++|++|+. |||..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 679999999999999999999999876554332 334467789999999999999999986 99999999999997
Q ss_pred ecc
Q 034004 102 YAH 104 (106)
Q Consensus 102 ~~~ 104 (106)
.++
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 644
No 81
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.5e-18 Score=94.95 Aligned_cols=76 Identities=20% Similarity=0.271 Sum_probs=70.5
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEec
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYA 103 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~ 103 (106)
+.++|.+++..+++++|+++|++||.|..+.++.+. ++.++|+|||+|.+.++|.+|+..|||..++|++|+|+++
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~-~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSS-SSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCC-CCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 457788888899999999999999999999998775 8899999999999999999999999999999999999975
No 82
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=6.8e-16 Score=91.42 Aligned_cols=76 Identities=36% Similarity=0.611 Sum_probs=68.5
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEe
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNY 102 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~ 102 (106)
.++|||+|||.++++++|+++|++||.|..+.+..+..++.++|+|||+|.+.++|++|+.. ++..+.++.+.+..
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~ 81 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKR 81 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhh
Confidence 47899999999999999999999999999999999988999999999999999999999984 56667777777654
No 83
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.8e-16 Score=84.81 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=57.8
Q ss_pred CCCCCceEEEc--CCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeee
Q 034004 22 DSNSRTKLFIG--GLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLL 93 (106)
Q Consensus 22 ~~~~~~~l~v~--nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i 93 (106)
...+..+++|. |||..+++++|+++|++||.+..+.+..+ +++|||+|.+.++|+.|+..|||..+
T Consensus 14 ~~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~~------k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 14 VSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPPN------KPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CSSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCTT------CSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeeccC------ccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 44556788885 59999999999999999999999877654 46999999999999999999999986
No 84
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=1.2e-15 Score=84.40 Aligned_cols=75 Identities=24% Similarity=0.246 Sum_probs=62.3
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCH-HHHHHHHHHhCCeeeCCeEEEE
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE-AAAGEAIKEMDGLLLDGRNIRV 100 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~-~~a~~a~~~l~~~~i~~~~i~v 100 (106)
.+.+...+||+|||..+++++|+.+|++||.|..+.+..+ +++|||.|.++ ++|..|+..+++..+.++.+.|
T Consensus 7 ~~~g~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~~------kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v 80 (113)
T d1owxa_ 7 EKIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG------AKEGIILFKEKAKEALGKAKDANNGNLQLRNKEV 80 (113)
T ss_dssp CCCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT------CSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSE
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhcCChheEEEecC------CceEEEEecCcHHHHHHHHHHhcCCceecCceEE
Confidence 3444456699999999999999999999999999998754 58999999985 7888999999998877665555
Q ss_pred Ee
Q 034004 101 NY 102 (106)
Q Consensus 101 ~~ 102 (106)
.+
T Consensus 81 ~~ 82 (113)
T d1owxa_ 81 TW 82 (113)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 85
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=3.5e-15 Score=80.66 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=65.7
Q ss_pred CCCCceEEEcCC--CCCCC---------HHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCe
Q 034004 23 SNSRTKLFIGGL--SYDTN---------ETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGL 91 (106)
Q Consensus 23 ~~~~~~l~v~nl--p~~~~---------~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~ 91 (106)
....++|+|.|+ |.++. .++|+..|++||.|..+.+..+. .+|++||.|.+.++|++|+..|||.
T Consensus 5 ~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~----~~G~~fV~f~~~e~A~~A~~~lng~ 80 (99)
T d2dita1 5 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRH----PDGVASVSFRDPEEADYCIQTLDGR 80 (99)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTC----TTCEEEEECSCHHHHHHHHHHSTTC
T ss_pred CCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCC----CccEEEEEECCHHHHHHHHHHhCCc
Confidence 345678999998 54321 36788999999999998876553 5789999999999999999999999
Q ss_pred eeCCeEEEEEecc
Q 034004 92 LLDGRNIRVNYAH 104 (106)
Q Consensus 92 ~i~~~~i~v~~~~ 104 (106)
.++|+.|+|++..
T Consensus 81 ~~~gr~i~v~~~~ 93 (99)
T d2dita1 81 WFGGRQITAQAWD 93 (99)
T ss_dssp EETTEECEEEECC
T ss_pred EECCEEEEEEEeC
Confidence 9999999999853
No 86
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=6.7e-15 Score=80.17 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=68.0
Q ss_pred CCCceEEEcCC--CCCCC--------HHHHHHhhcccCCeeEEEEeecCCC--CCccceEEEEeCCHHHHHHHHHHhCCe
Q 034004 24 NSRTKLFIGGL--SYDTN--------ETVLKDAFGQHGEIIEVKVICDRVT--GQSRGYGFVKFASEAAAGEAIKEMDGL 91 (106)
Q Consensus 24 ~~~~~l~v~nl--p~~~~--------~~~l~~~f~~~g~i~~~~~~~~~~~--~~~~~~~fv~f~~~~~a~~a~~~l~~~ 91 (106)
++++.|.+.|+ |..+. .++|+..|++||.|..+.+.+++.. ....|++||.|.+.++|.+|+..|||.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 35678999998 55443 3568999999999999999876543 234689999999999999999999999
Q ss_pred eeCCeEEEEEeccC
Q 034004 92 LLDGRNIRVNYAHK 105 (106)
Q Consensus 92 ~i~~~~i~v~~~~~ 105 (106)
.++|+.|.+.+..+
T Consensus 82 ~f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 82 KFANRVVVTKYCDP 95 (104)
T ss_dssp CSSSSCCEEEEECH
T ss_pred EECCeEEEEEEcCH
Confidence 99999999998653
No 87
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=3.4e-14 Score=74.01 Aligned_cols=70 Identities=20% Similarity=0.284 Sum_probs=58.6
Q ss_pred CceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCe-EEEEEec
Q 034004 26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGR-NIRVNYA 103 (106)
Q Consensus 26 ~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~-~i~v~~~ 103 (106)
.+.|+|.++|++.+++.| +.|++||.|..+.+.. .++++||.|.+.++|++|++ +||..++|+ .|.|...
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~~------~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~ 74 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVMSN------TGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPC 74 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEECS------SSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEEC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEecC------CCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeC
Confidence 456999999999886655 5799999999987743 35899999999999999996 999999996 4667754
No 88
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31 E-value=5.9e-06 Score=40.58 Aligned_cols=61 Identities=20% Similarity=0.284 Sum_probs=51.4
Q ss_pred HHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 41 TVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 41 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
+.|...|..++.|..+.+..... ..-.|-|...+.++|+-++..||...|++++|.|+++.
T Consensus 11 q~L~~~f~~h~~V~sv~l~~~~d---g~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 11 QLLQEAFARHGKVKSVELSPHTD---YQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHSCEEEEEECSCCS---TTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHhheeEEEEEEEeccC---CcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 45666788999999998866542 33468999999999999999999999999999999864
No 89
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=8.8e-06 Score=42.21 Aligned_cols=67 Identities=12% Similarity=0.147 Sum_probs=57.1
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCc--cceEEEEeCCHHHHHHHHHHhCCeee
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQS--RGYGFVKFASEAAAGEAIKEMDGLLL 93 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~--~~~~fv~f~~~~~a~~a~~~l~~~~i 93 (106)
++|.|+.||++.+++++.+.++..|.+........+.+.+. ..-|+|.|.+.+++....+.++|..+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F 70 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVF 70 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEE
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEE
Confidence 46889999999999999999999898888887777655443 34589999999999999999999985
No 90
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=6.6e-05 Score=38.58 Aligned_cols=55 Identities=25% Similarity=0.453 Sum_probs=47.5
Q ss_pred HHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhCCeeeCCeEEEEEecc
Q 034004 41 TVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDGRNIRVNYAH 104 (106)
Q Consensus 41 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~~~~i~~~~i~v~~~~ 104 (106)
..|.+.|..||++.-++++.+. -.|.|.+-+.|-+|+. +++..+.|+.|.|+...
T Consensus 39 ~~Llq~l~~~GeViLvRFv~d~--------mwVTF~dG~SAL~al~-l~g~~v~G~~l~It~~~ 93 (95)
T d1ufwa_ 39 TELMQTLGSYGTIVLVRINQGQ--------MLVTFADSHSALSVLD-VDGMKVKGRAVKISGPS 93 (95)
T ss_dssp HHHHHHHHHHSCCSEEEEETTE--------EEEECSCSHHHHHHHH-GGGSEETTEEEEEECCC
T ss_pred HHHHHHHhhCCeEEEEEEeCCe--------EEEEECCcHHHHHHhc-cCCeEEcceEEEEecCC
Confidence 5677788999999988887763 7899999999999997 89999999999998543
No 91
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.35 E-value=0.00093 Score=34.68 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=47.1
Q ss_pred CCCCCceEEEcCCCCCCCHHHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhC
Q 034004 22 DSNSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMD 89 (106)
Q Consensus 22 ~~~~~~~l~v~nlp~~~~~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~ 89 (106)
+.+....||.-..|..+...+|.++|++||.|. +.++.+- .|||...+.++++.++..+.
T Consensus 11 ~~p~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~-VswIddT-------Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 11 LQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQ-ISWIDDT-------SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCCCCSEEEEECCTTCCHHHHHHHHTTTCSCC-CEEEETT-------EEEEECSCHHHHHHHHHHHH
T ss_pred CCCCcceeEEEeCCcccchhHHHHHhcCCCceE-EEEecCc-------eEEEEecCHHHHHHHHHHhc
Confidence 344455688889999999999999999999774 3344442 79999999999999887654
No 92
>d2od6a1 d.58.4.22 (A:1-109) Hypothetical protein GOS_2359375 {environmental samples}
Probab=56.03 E-value=11 Score=19.20 Aligned_cols=48 Identities=10% Similarity=-0.082 Sum_probs=33.1
Q ss_pred HHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHh
Q 034004 41 TVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88 (106)
Q Consensus 41 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l 88 (106)
+.+...|.+.|-+......-....|..+-....+|.+.++.++|...+
T Consensus 32 ~~~~~~Lk~~Gl~r~~~~~iwNk~~~fr~~~i~EYkd~~Afk~Cq~i~ 79 (109)
T d2od6a1 32 PVWVKEMKSRGLLKFSMNRVWNKGEVFRVVMTYEYKDRASFEANIAYL 79 (109)
T ss_dssp HHHHHHHHTTTEEEEEEEEECSSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCceEEEEEEeCCCCcEEEEEEEEECCHHHHHHHHHHH
Confidence 344455666777666543333336777777888999999999988765
No 93
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=41.13 E-value=20 Score=18.13 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=27.5
Q ss_pred HHHHHhhcccCCeeEEEEeecCCCCCccceEEEEeCCHHHHHHHHHHhC
Q 034004 41 TVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMD 89 (106)
Q Consensus 41 ~~l~~~f~~~g~i~~~~~~~~~~~~~~~~~~fv~f~~~~~a~~a~~~l~ 89 (106)
.++.+.+..+|.. .+ +|.+ ..+|..|.+.+.|..+.+.+.
T Consensus 60 ~~~~~~L~~~g~~---~M-----SGSG-stvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RL-----TGTG-ACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---EE-----CTTS-SCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---ee-----cCCC-CEEEEEeCCHHHHHHHHHHcC
Confidence 4455556667742 23 3332 257999999999999998774
No 94
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=39.91 E-value=19 Score=20.97 Aligned_cols=28 Identities=18% Similarity=0.363 Sum_probs=21.1
Q ss_pred eEEEcCCCCCCCHHHHHHhhcccCCeeE
Q 034004 28 KLFIGGLSYDTNETVLKDAFGQHGEIIE 55 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~~~g~i~~ 55 (106)
...|+|||.+++..-|..++.....+..
T Consensus 92 ~~vvgNlPY~Iss~Il~~l~~~~~~~~~ 119 (252)
T d1qyra_ 92 LRVFGNLPYNISTPLMFHLFSYTDAIAD 119 (252)
T ss_dssp EEEEEECCTTTHHHHHHHHHTTGGGEEE
T ss_pred eEEEecchHHHHHHHHHHhcccccceeh
Confidence 4668999999999988888765444443
No 95
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=32.68 E-value=41 Score=19.33 Aligned_cols=23 Identities=13% Similarity=0.348 Sum_probs=19.0
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcc
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQ 49 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~ 49 (106)
.-..|+|||.+++...|..++..
T Consensus 94 ~~~vv~NLPY~Ist~il~~~l~~ 116 (245)
T d1yuba_ 94 RYKIVGNIPYHLSTQIIKKVVFE 116 (245)
T ss_dssp EEEEEEECCSSSCHHHHHHHHHH
T ss_pred eeeEeeeeehhhhHHHHHHHhhh
Confidence 34678999999999999988754
No 96
>d1t15a2 c.15.1.3 (A:1758-1859) Breast cancer associated protein, BRCA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.01 E-value=27 Score=16.37 Aligned_cols=29 Identities=10% Similarity=-0.059 Sum_probs=22.1
Q ss_pred CCceEEEcCCCCCCCHHHHHHhhcccCCe
Q 034004 25 SRTKLFIGGLSYDTNETVLKDAFGQHGEI 53 (106)
Q Consensus 25 ~~~~l~v~nlp~~~~~~~l~~~f~~~g~i 53 (106)
.+.++|+.+.......++|+.+...+|..
T Consensus 5 ~g~~i~~~g~~~~~~~~~L~~li~~~GG~ 33 (102)
T d1t15a2 5 RGLEICCYGPFTNMPTDQLEWMVQLCGAS 33 (102)
T ss_dssp TTCEEEECSCCSSSCHHHHHHHHHHTTCE
T ss_pred CCcEEEEeCCCCCcCHHHHHHHHHHhCCE
Confidence 35678888754567789999999988764
No 97
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]}
Probab=24.84 E-value=14 Score=21.32 Aligned_cols=21 Identities=10% Similarity=0.341 Sum_probs=17.7
Q ss_pred eEEEcCCCCCCCHHHHHHhhc
Q 034004 28 KLFIGGLSYDTNETVLKDAFG 48 (106)
Q Consensus 28 ~l~v~nlp~~~~~~~l~~~f~ 48 (106)
...|+|||.+++..-|..++.
T Consensus 87 ~~vv~NLPYnIss~il~~ll~ 107 (235)
T d1qama_ 87 YKIFGNIPYNISTDIIRKIVF 107 (235)
T ss_dssp CEEEEECCGGGHHHHHHHHHH
T ss_pred ceeeeeehhhhhHHHHHHHHh
Confidence 356899999999999998874
No 98
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.36 E-value=31 Score=20.37 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=20.1
Q ss_pred ceEEEcCCCCCCCHHHHHHhhcccCCe
Q 034004 27 TKLFIGGLSYDTNETVLKDAFGQHGEI 53 (106)
Q Consensus 27 ~~l~v~nlp~~~~~~~l~~~f~~~g~i 53 (106)
....|+|||.+++..-|..++.....+
T Consensus 87 ~~~vV~NLPY~Iss~il~~~~~~~~~~ 113 (278)
T d1zq9a1 87 FDTCVANLPYQISSPFVFKLLLHRPFF 113 (278)
T ss_dssp CSEEEEECCGGGHHHHHHHHHHCSSCC
T ss_pred hhhhhcchHHHHHHHHHHHHHhhCCcc
Confidence 346799999999998888877543333
No 99
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=23.51 E-value=44 Score=16.59 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=23.8
Q ss_pred CCCCHHHHHHhhcc-cC---CeeEE-EEeecCCCCCccceEEEEeCCHHHHHH
Q 034004 36 YDTNETVLKDAFGQ-HG---EIIEV-KVICDRVTGQSRGYGFVKFASEAAAGE 83 (106)
Q Consensus 36 ~~~~~~~l~~~f~~-~g---~i~~~-~~~~~~~~~~~~~~~fv~f~~~~~a~~ 83 (106)
...+..+++..++. ++ ....+ .+......+...|+|+| |.+.+.+.+
T Consensus 28 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~fG~~~stG~a~I-Yd~~e~~kk 79 (102)
T d1ywxa1 28 ATPSIKDVKMKLVAVLNANKQVLVVDTLDQIFGKLEAEGYAKI-YNDEKAMAT 79 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEEEEEEECSSSSEEEEEEEE-CSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCcCcCEEEEEcCEecCCCCeEEEEEEE-ECCHHHHHh
Confidence 44566677666643 33 33333 34444334445555543 666666654
No 100
>d2v94a1 d.12.1.3 (A:1-93) Ribosomal protein S24e {Pyrococcus abyssi [TaxId: 29292]}
Probab=21.80 E-value=46 Score=16.18 Aligned_cols=46 Identities=9% Similarity=0.044 Sum_probs=22.1
Q ss_pred CCCCHHHHHHhhcc-cC---CeeEE-EEeecCCCCCccceEEE-EeCCHHHHHH
Q 034004 36 YDTNETVLKDAFGQ-HG---EIIEV-KVICDRVTGQSRGYGFV-KFASEAAAGE 83 (106)
Q Consensus 36 ~~~~~~~l~~~f~~-~g---~i~~~-~~~~~~~~~~~~~~~fv-~f~~~~~a~~ 83 (106)
...+..++++.+++ ++ ....+ .+... .|.+...||+ .|++.+.+.+
T Consensus 29 ~Tpsr~ei~~kla~~~~~~~~~vvv~~~~t~--fG~~~stG~a~IYd~~e~~kk 80 (93)
T d2v94a1 29 PTPSRKDVKGKLVAMLDLNPETTVIQYIRSY--FGSYKSKGYAKYYYDKDRMLY 80 (93)
T ss_dssp CCCCHHHHHHHHHHHHTCCGGGEEEEEEECC--TTCSEEEEEEEEESSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEEeCccC--CCCceEEEEEEEECCHHHHHh
Confidence 35666666655543 43 22223 22233 3444444444 3666666643
Done!