BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034008
(106 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93V47|GG2_ARATH Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis
thaliana GN=GG2 PE=1 SV=1
Length = 100
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 77/106 (72%), Gaps = 6/106 (5%)
Query: 1 MQSDRSDSRGLNTQRTQSLTGSGDTRGKHRIQAELKRLEQETRFLEEELEQLDKTEKASA 60
M++ S+S G + R DTRGKHRIQAELKRLEQE RFLEEELEQL+K + ASA
Sbjct: 1 MEAGSSNSSGQLSGRVV------DTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASA 54
Query: 61 ACNETLRNVEAIPDPLLPITNGPLNPLWDRWFERPKESRGCRCWIL 106
+C E L +V++ PDPLLP T GP+N WD+WFE PKE++ C C IL
Sbjct: 55 SCKEFLDSVDSKPDPLLPETTGPVNATWDQWFEGPKEAKRCGCSIL 100
>sp|Q9FDX9|GG1_ARATH Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis
thaliana GN=GG1 PE=1 SV=1
Length = 98
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 57/80 (71%)
Query: 27 GKHRIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPITNGPLNP 86
GKHRI AEL R+EQE FLE+EL++++ T+ S C E L +E PDPLLP+TNGPLN
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78
Query: 87 LWDRWFERPKESRGCRCWIL 106
WDRWFE P GCRC IL
Sbjct: 79 GWDRWFEGPNGGEGCRCLIL 98
>sp|Q6AWT8|GG3_ARATH Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis
thaliana GN=GG3 PE=2 SV=1
Length = 251
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 24 DTRGKHRIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
D GK R A ++ LE+E FLE E++ ++ + AS E V A DPL+P
Sbjct: 43 DLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRCIKEVSDFVVANSDPLIP 97
>sp|P55558|Y4LR_RHISN Uncharacterized protein y4lR OS=Rhizobium sp. (strain NGR234)
GN=NGR_a02600 PE=4 SV=1
Length = 522
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
Query: 35 LKRLEQETRFLEEELEQLD---KTEKASAA-CNETLRNVEAIPDPLLPITNGPLNPLWDR 90
L +L + R L+ LE +D + + A+AA N LRN A+ D L+P T D
Sbjct: 378 LSQLRPQERDLQALLEHVDPQKEIQNATAAELNRMLRNASAL-DALVPFT--------DS 428
Query: 91 WFERPKESRGC 101
WFE E+RG
Sbjct: 429 WFEDTGETRGI 439
>sp|P24528|MGMT_RAT Methylated-DNA--protein-cysteine methyltransferase OS=Rattus
norvegicus GN=Mgmt PE=1 SV=3
Length = 209
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 20/80 (25%)
Query: 22 SGDTRGKHRIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPITN 81
SG RG H I RFL + D TE + AC E L E +P+PL+ T
Sbjct: 22 SGCERGLHGI-----------RFLSGKTPNTDPTE--APACPEVLGGPEGVPEPLVQCTA 68
Query: 82 GPLNPLW-DRWFERPKESRG 100
W + +F P + G
Sbjct: 69 ------WLEAYFHEPAATEG 82
>sp|B9JER3|PROA_AGRRK Gamma-glutamyl phosphate reductase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=proA PE=3 SV=1
Length = 427
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Query: 5 RSDSRGLNTQRTQS----LTGSGDT---RGKHRIQAELKRLE--QETRFLEEELEQLDKT 55
R+ SR L T+S L D R H + K L+ + T L +++L T
Sbjct: 23 RAASRPLAFASTESKNRALAAMADAILARKDHILAENAKDLKDVEGTDILASFVDRLTLT 82
Query: 56 EKASAACNETLRNVEAIPDPLLPITNGPLNPLWDR 90
EK A E +R + A+PDP+ G + WDR
Sbjct: 83 EKRVAEMAEGIRAIAALPDPV-----GEVFAAWDR 112
>sp|B0FJL7|PLIN5_SHEEP Perilipin-5 OS=Ovis aries GN=Plin5 PE=2 SV=1
Length = 456
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 21 GSGDTRGKH-RIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPI 79
GS TR +H + L +L Q+ ++ L QL +T E + ++ P+ P
Sbjct: 202 GSLSTRLRHLAYEHSLGKLRQKKHHAQDTLAQLQET-------LELIHRMQCGVTPITPA 254
Query: 80 TNGPLNPLWDRWFERPKES 98
G ++ LW+ W +RP E+
Sbjct: 255 RPGKVHELWEDWSQRPLEN 273
>sp|A6QLL0|PLIN5_BOVIN Perilipin-5 OS=Bos taurus GN=PLIN5 PE=2 SV=1
Length = 456
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 21 GSGDTRGKH-RIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPI 79
GS TR +H + L +L Q+ ++ L QL +T E + ++ P+ P
Sbjct: 202 GSLSTRLRHLAYEHSLGKLRQKKHHAQDMLAQLQET-------LELIHRMQCGVTPITPA 254
Query: 80 TNGPLNPLWDRWFERPKES 98
G ++ LW+ W +RP E+
Sbjct: 255 RPGKVHELWEDWSQRPLEN 273
>sp|Q6GGH6|EX7S_STAAR Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain MRSA252) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|P67462|EX7S_STAAW Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain MW2) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|A8Z462|EX7S_STAAT Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|Q6G943|EX7S_STAAS Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain MSSA476) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|P67461|EX7S_STAAN Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain N315) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|P67460|EX7S_STAAM Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|Q5HFP9|EX7S_STAAC Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain COL) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|Q2YYB9|EX7S_STAAB Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|A5IT51|EX7S_STAA9 Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain JH9) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|Q2FY47|EX7S_STAA8 Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain NCTC 8325) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|Q2FGL1|EX7S_STAA3 Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain USA300) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|A6U1Z4|EX7S_STAA2 Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain JH1) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|A7X2P9|EX7S_STAA1 Exodeoxyribonuclease 7 small subunit OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=xseB PE=3 SV=1
Length = 76
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 35 LKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLP 78
+++L+ ET LEE L+ + K SAAC+ TL+N E + L+
Sbjct: 19 VQKLDNETVSLEESLDLYQRGMKLSAACDTTLKNAEKKVNDLIK 62
>sp|O27041|VATI_METTH V-type ATP synthase subunit I OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=atpI PE=3 SV=1
Length = 658
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 30 RIQAELKRLEQETRFLEEELEQLDKTEKA---SAACNETLRNVE 70
R + L R+E ETR +EE+L +LD A S + E L++ +
Sbjct: 119 RAEETLGRVESETRVMEEKLNELDSERSAVESSLSVAEKLKDFD 162
>sp|Q00G26|PLIN5_HUMAN Perilipin-5 OS=Homo sapiens GN=PLIN5 PE=2 SV=2
Length = 463
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 21 GSGDTRGKH-RIQAELKRLEQETRFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPI 79
GS R +H + + +L Q ++ L QL +T E + +++ P P
Sbjct: 202 GSLSARIRHLAYEHSVGKLRQSKHRAQDTLAQLQET-------LELIDHMQCGVTPTAPA 254
Query: 80 TNGPLNPLWDRWFERPKESR 99
G ++ LW W +RP ESR
Sbjct: 255 CPGKVHELWGEWGQRPPESR 274
>sp|A6T242|PROA_JANMA Gamma-glutamyl phosphate reductase OS=Janthinobacterium sp. (strain
Marseille) GN=proA PE=3 SV=2
Length = 421
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 49 LEQLDKTEKASAACNETLRNVEAIPDPLLPITNGPLNP 86
L++L ++KA A E L + A+PDP+ I+N P
Sbjct: 68 LDRLTLSDKAIATMAEGLEQIVALPDPIGEISNMKYRP 105
>sp|A4G8E9|PROA_HERAR Gamma-glutamyl phosphate reductase OS=Herminiimonas arsenicoxydans
GN=proA PE=3 SV=1
Length = 421
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 49 LEQLDKTEKASAACNETLRNVEAIPDPLLPITNGPLNP 86
L++L ++KA A E L + A+PDP+ I+N P
Sbjct: 68 LDRLTLSDKAIATMAEGLEQIVALPDPIGEISNMKYRP 105
>sp|O31966|YOMR_BACSU SPBc2 prophage-derived uncharacterized protein YomR OS=Bacillus
subtilis (strain 168) GN=yomR PE=4 SV=1
Length = 405
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 10/85 (11%)
Query: 12 NTQRTQSLTGSGDTRGKHRIQAELKRLEQETRFLEEELEQLDK----------TEKASAA 61
N + SL GS D KH ++ E E+ F+E + +L K K
Sbjct: 13 NNIQINSLRGSNDRAEKHMLEHEQALTEKTNLFMEYQQNELKKHTDDKSNPHLVTKEQVG 72
Query: 62 CNETLRNVEAIPDPLLPITNGPLNP 86
L NV+A + N LNP
Sbjct: 73 LGNVLNNVQATKEEFDEHLNDTLNP 97
>sp|Q4J945|GATE_SULAC Glutamyl-tRNA(Gln) amidotransferase subunit E OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=gatE PE=3 SV=2
Length = 634
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 4 DRSDSRGLNTQRTQSLTGSGDTRGKHRIQAELKRLEQETRFLEEELEQLDKTEKASAACN 63
D SD+ G QRT + G ++ E K++ +T LEE D K S + N
Sbjct: 124 DGSDTTGF--QRTSIVAMGG------QVIVEGKKIGIQTIALEE-----DAARKISESAN 170
Query: 64 ETLRNVEAIPDPLLPITNGP 83
ET+ +++ + PL+ I+ P
Sbjct: 171 ETMYSLDRLGIPLIEISTAP 190
>sp|Q6B8V2|DNAK_GRATL Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui
GN=dnaK PE=3 SV=1
Length = 621
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 3 SDRSDSRGLNTQRTQSLTGSGDTRGKHRIQAELKRLEQETRFLEEELEQLDKTEKASAAC 62
S ++ +G +++ ++TG+ T K ++ +K E+ + + + EQ+D +A A C
Sbjct: 480 SVKAKDKGTGKEQSITITGA-STLPKEEVEKLVKEAEENSELDKHKREQIDLKNQADALC 538
Query: 63 NETLRNVEAIPDPL 76
++ + + D +
Sbjct: 539 YQSQNQINELKDKI 552
>sp|A6GYT9|RPOC_FLAPJ DNA-directed RNA polymerase subunit beta' OS=Flavobacterium
psychrophilum (strain JIP02/86 / ATCC 49511) GN=rpoC
PE=3 SV=1
Length = 1438
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 38 LEQETRFLEEELEQL-DKTEKASAACNETLRNVEAIPDPL 76
L E R L+E ++ L D T KASA E+ R ++++ D L
Sbjct: 315 LRNEKRMLQESVDSLFDNTRKASAVKTESNRPLKSLSDSL 354
>sp|A5FIJ4|RPOC_FLAJ1 DNA-directed RNA polymerase subunit beta' OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=rpoC PE=3 SV=1
Length = 1436
Score = 28.9 bits (63), Expect = 8.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 38 LEQETRFLEEELEQL-DKTEKASAACNETLRNVEAIPDPL 76
L E R L+E ++ L D T KASA E+ R ++++ D L
Sbjct: 313 LRNEKRMLQESVDSLFDNTRKASAVKTESNRPLKSLSDSL 352
>sp|P52325|RPOD_NEIGO RNA polymerase sigma factor RpoD OS=Neisseria gonorrhoeae GN=rpoD
PE=3 SV=1
Length = 642
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 26 RGKHRI---QAELKRLEQETRFLEEELEQLDK----TEKASAACNETL 66
R +H I Q EL +E+ETR EEL++++K +EK SAA + +
Sbjct: 356 RFRHAILEKQTELADMEKETRISIEELKEINKNMVSSEKVSAAAKQEM 403
>sp|Q6AXB1|CF211_XENLA UPF0364 protein C6orf211 homolog OS=Xenopus laevis PE=2 SV=1
Length = 440
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 43 RFLEEELEQLDKTEKASAACNETLRNVEAIPDPLLPITNGPLNP-LWDRWFERPK 96
+F E+ E+ + EK + + LRN P+LP+T+ L+ LW+++ + K
Sbjct: 41 KFFEDHGEEGVEAEKRALSFFSKLRNEMQTNKPVLPLTDNQLDTELWNQYLDYQK 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,295,644
Number of Sequences: 539616
Number of extensions: 1482944
Number of successful extensions: 7052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 6919
Number of HSP's gapped (non-prelim): 213
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)