Query 034010
Match_columns 106
No_of_seqs 105 out of 331
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 14:46:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eqt_A ATP-dependent RNA helic 96.1 0.0034 1.2E-07 45.2 2.8 93 7-101 11-105 (145)
2 3ga3_A Interferon-induced heli 94.6 0.029 1E-06 39.8 3.6 88 8-99 11-100 (133)
3 3e0o_A Peptide methionine sulf 94.2 0.033 1.1E-06 40.1 3.2 67 7-81 40-106 (144)
4 3lrr_A Probable ATP-dependent 94.2 0.027 9.4E-07 39.2 2.7 89 6-98 2-94 (121)
5 2qfd_A Probable ATP-dependent 93.9 0.07 2.4E-06 38.3 4.4 81 6-98 24-116 (145)
6 3hcg_A Peptide methionine sulf 93.8 0.053 1.8E-06 39.1 3.6 68 7-81 41-108 (146)
7 2kv1_A Methionine-R-sulfoxide 93.6 0.048 1.6E-06 38.4 3.0 63 8-79 19-82 (124)
8 2kao_A Methionine-R-sulfoxide 93.4 0.069 2.4E-06 37.5 3.5 65 7-79 18-82 (124)
9 3cxk_A Methionine-R-sulfoxide 93.3 0.046 1.6E-06 40.1 2.6 67 7-80 71-137 (164)
10 4a2v_A RIG-I, retinoic acid in 93.2 0.05 1.7E-06 38.4 2.6 89 6-98 4-97 (131)
11 3mao_A Methionine-R-sulfoxide 92.8 0.052 1.8E-06 37.1 2.2 65 7-79 11-75 (105)
12 2k8d_A Peptide methionine sulf 90.1 0.076 2.6E-06 38.4 0.7 67 7-81 59-126 (151)
13 3e0m_A Peptide methionine sulf 88.7 0.26 8.8E-06 39.3 2.9 67 7-81 207-274 (313)
14 3hcj_A MSRB, peptide methionin 88.1 0.097 3.3E-06 38.0 0.0 66 7-80 48-114 (154)
15 2l1u_A MSRB2, methionine-R-sul 86.7 0.19 6.4E-06 36.1 0.9 66 7-81 35-109 (143)
16 4gl2_A Interferon-induced heli 74.9 0.91 3.1E-05 37.1 1.1 92 4-99 581-674 (699)
17 2ykg_A Probable ATP-dependent 65.5 4.1 0.00014 33.2 3.0 87 8-98 577-667 (696)
18 1fv5_A First zinc finger of U- 64.7 0.57 1.9E-05 25.3 -1.6 24 4-27 3-26 (36)
19 1x6m_A GFA, glutathione-depend 60.6 16 0.00053 26.2 5.1 36 45-81 79-114 (196)
20 4a2w_A RIG-I, retinoic acid in 56.2 2.4 8.1E-05 37.0 0.0 87 8-98 811-902 (936)
21 1srk_A Zinc finger protein ZFP 56.0 1.8 6.2E-05 21.0 -0.5 21 6-26 4-24 (35)
22 2lvu_A Zinc finger and BTB dom 60.6 2.4 8.3E-05 19.1 0.0 19 8-26 1-19 (26)
23 2elx_A Zinc finger protein 406 53.4 2 6.9E-05 20.7 -0.6 21 6-26 4-24 (35)
24 2elm_A Zinc finger protein 406 53.3 2.7 9.3E-05 20.9 -0.1 21 5-25 5-25 (37)
25 2elp_A Zinc finger protein 406 53.3 3.1 0.00011 20.4 0.2 21 5-25 5-26 (37)
26 1p7a_A BF3, BKLF, kruppel-like 52.1 2.1 7E-05 21.1 -0.7 22 5-26 7-28 (37)
27 2elv_A Zinc finger protein 406 51.8 2.4 8.2E-05 20.7 -0.4 21 5-25 5-25 (36)
28 2m0e_A Zinc finger and BTB dom 51.2 3.7 0.00013 18.4 0.2 19 8-26 1-19 (29)
29 2elq_A Zinc finger protein 406 50.6 2.4 8.1E-05 20.8 -0.6 22 5-26 5-26 (36)
30 3fac_A Putative uncharacterize 50.5 13 0.00045 24.2 3.0 34 46-79 48-81 (118)
31 2kvh_A Zinc finger and BTB dom 50.3 2.1 7.1E-05 19.5 -0.8 18 8-25 2-19 (27)
32 2lvr_A Zinc finger and BTB dom 55.5 3.4 0.00012 18.8 0.0 19 8-26 2-20 (30)
33 2epc_A Zinc finger protein 32; 48.4 2.9 9.8E-05 21.1 -0.5 22 5-26 7-28 (42)
34 2elt_A Zinc finger protein 406 48.0 2.7 9.1E-05 20.4 -0.6 20 6-25 6-25 (36)
35 2yu5_A Zinc finger protein 473 47.9 3.8 0.00013 21.0 0.0 22 5-26 8-29 (44)
36 1njq_A Superman protein; zinc- 47.0 3 0.0001 20.9 -0.6 21 6-26 3-23 (39)
37 2elo_A Zinc finger protein 406 46.5 2.4 8.2E-05 20.8 -1.0 23 4-26 4-26 (37)
38 2els_A Zinc finger protein 406 46.3 3.1 0.00011 20.3 -0.5 20 6-25 6-25 (36)
39 2kvf_A Zinc finger and BTB dom 46.2 2.6 8.8E-05 19.2 -0.8 18 8-25 2-19 (28)
40 2en2_A B-cell lymphoma 6 prote 45.8 3 0.0001 21.1 -0.6 22 5-26 7-28 (42)
41 1rik_A E6APC1 peptide; E6-bind 45.0 4.1 0.00014 18.5 -0.2 19 8-26 1-19 (29)
42 2m0d_A Zinc finger and BTB dom 44.5 3 0.0001 18.9 -0.7 18 8-25 2-19 (30)
43 2lvt_A Zinc finger and BTB dom 50.2 4.7 0.00016 18.4 0.0 19 8-26 1-19 (29)
44 2elr_A Zinc finger protein 406 44.0 2.8 9.7E-05 20.3 -0.9 22 5-26 5-26 (36)
45 2eos_A B-cell lymphoma 6 prote 43.0 3.6 0.00012 20.9 -0.6 22 5-26 7-28 (42)
46 2ept_A Zinc finger protein 32; 42.3 4.1 0.00014 20.5 -0.4 22 5-26 6-27 (41)
47 1klr_A Zinc finger Y-chromosom 41.2 4.5 0.00015 18.2 -0.4 18 9-26 2-19 (30)
48 2ely_A Zinc finger protein 224 40.5 10 0.00035 19.4 1.0 23 5-27 8-30 (46)
49 2eoy_A Zinc finger protein 473 40.5 8.5 0.00029 19.8 0.7 22 5-26 8-29 (46)
50 3iuf_A Zinc finger protein UBI 40.3 4.5 0.00016 21.6 -0.5 21 6-26 4-24 (48)
51 1nyp_A Pinch protein; LIM doma 40.1 8.6 0.00029 22.1 0.7 11 10-20 32-42 (66)
52 1vd4_A Transcription initiatio 38.2 13 0.00044 20.8 1.3 16 6-21 11-26 (62)
53 2iyb_E Testin, TESS, TES; LIM 38.1 8 0.00027 22.4 0.3 13 8-20 31-43 (65)
54 2yu8_A Zinc finger protein 347 38.1 9.1 0.00031 19.6 0.6 22 5-26 8-29 (46)
55 1paa_A Yeast transcription fac 37.9 4.3 0.00015 18.5 -0.8 18 9-26 2-19 (30)
56 1x61_A Thyroid receptor intera 37.2 13 0.00045 21.5 1.2 10 10-19 34-43 (72)
57 2yrm_A B-cell lymphoma 6 prote 37.1 5 0.00017 20.6 -0.6 21 6-26 7-27 (43)
58 3uk3_C Zinc finger protein 217 37.0 3.9 0.00013 22.0 -1.2 21 6-26 1-21 (57)
59 2emb_A Zinc finger protein 473 36.5 7 0.00024 19.9 -0.1 22 5-26 8-29 (44)
60 2kvg_A Zinc finger and BTB dom 36.5 2.9 9.8E-05 19.2 -1.6 18 8-25 2-19 (27)
61 2yte_A Zinc finger protein 473 36.3 5.5 0.00019 19.9 -0.5 22 5-26 6-27 (42)
62 2epw_A Zinc finger protein 268 35.8 10 0.00035 19.3 0.5 23 5-27 8-30 (46)
63 2en3_A ZFP-95, zinc finger pro 35.8 10 0.00035 19.4 0.5 22 5-26 8-29 (46)
64 2eod_A TNF receptor-associated 35.7 15 0.00051 20.5 1.3 20 6-25 33-53 (66)
65 2eoo_A ZFP-95, zinc finger pro 35.3 7.6 0.00026 20.0 -0.1 22 5-26 8-29 (46)
66 2el5_A Zinc finger protein 268 35.2 7 0.00024 19.6 -0.2 22 5-26 6-27 (42)
67 2m0f_A Zinc finger and BTB dom 34.4 4.9 0.00017 18.0 -0.9 17 9-25 2-18 (29)
68 2em8_A Zinc finger protein 224 34.0 7.7 0.00026 20.0 -0.2 22 5-26 8-29 (46)
69 2d8z_A Four and A half LIM dom 33.8 14 0.00047 21.4 0.9 11 10-20 32-42 (70)
70 2epv_A Zinc finger protein 268 33.7 8 0.00028 19.8 -0.1 22 5-26 8-29 (44)
71 2ytf_A Zinc finger protein 268 33.7 8.1 0.00028 19.7 -0.1 22 5-26 8-29 (46)
72 2yts_A Zinc finger protein 484 33.6 7.6 0.00026 19.8 -0.2 22 5-26 8-29 (46)
73 2yth_A Zinc finger protein 224 33.5 7.9 0.00027 19.9 -0.2 23 5-27 8-30 (46)
74 1iz6_A Initiation factor 5A; S 33.4 34 0.0012 23.5 3.0 32 30-61 34-65 (138)
75 2enh_A Zinc finger protein 28 33.4 10 0.00034 19.5 0.2 23 5-27 8-30 (46)
76 2ytg_A ZFP-95, zinc finger pro 33.2 11 0.00038 19.2 0.4 23 5-27 8-30 (46)
77 2eow_A Zinc finger protein 347 33.2 8.9 0.0003 19.6 -0.0 22 5-26 8-29 (46)
78 2drp_A Protein (tramtrack DNA- 33.2 6 0.0002 21.9 -0.8 23 5-27 6-28 (66)
79 2em5_A ZFP-95, zinc finger pro 33.1 8.5 0.00029 19.8 -0.1 22 5-26 8-29 (46)
80 1yui_A GAGA-factor; complex (D 33.1 6.9 0.00023 21.1 -0.5 21 6-26 21-41 (54)
81 2ctu_A Zinc finger protein 483 33.0 28 0.00095 19.0 2.2 23 5-27 14-36 (73)
82 1ogy_B Diheme cytochrome C NAP 32.7 17 0.00059 25.4 1.4 29 7-35 93-121 (130)
83 2eox_A Zinc finger protein 473 32.6 9.6 0.00033 19.3 0.1 22 5-26 8-29 (44)
84 1x4l_A Skeletal muscle LIM-pro 32.5 17 0.00059 21.1 1.2 11 10-20 36-46 (72)
85 2eor_A Zinc finger protein 224 32.3 8.2 0.00028 19.7 -0.3 22 5-26 8-29 (46)
86 2em7_A Zinc finger protein 224 32.3 8.8 0.0003 19.7 -0.1 22 5-26 8-29 (46)
87 2enf_A Zinc finger protein 347 32.1 7.4 0.00025 20.0 -0.5 22 5-26 8-29 (46)
88 2ep0_A Zinc finger protein 28 32.0 6.9 0.00024 20.1 -0.6 22 5-26 8-29 (46)
89 2emj_A Zinc finger protein 28 32.0 8.7 0.0003 19.8 -0.2 22 5-26 8-29 (46)
90 2eme_A Zinc finger protein 473 31.9 8.9 0.0003 19.6 -0.2 22 5-26 8-29 (46)
91 2eom_A ZFP-95, zinc finger pro 31.8 8.3 0.00028 19.9 -0.3 22 5-26 8-29 (46)
92 2emx_A Zinc finger protein 268 31.8 8.9 0.0003 19.4 -0.2 22 5-26 6-27 (44)
93 2yrj_A Zinc finger protein 473 31.8 9.7 0.00033 19.4 -0.0 22 5-26 8-29 (46)
94 2ene_A Zinc finger protein 347 31.7 9.4 0.00032 19.5 -0.1 22 5-26 8-29 (46)
95 2eof_A Zinc finger protein 268 31.7 8.7 0.0003 19.3 -0.2 22 5-26 8-29 (44)
96 2em2_A Zinc finger protein 28 31.7 9.1 0.00031 19.7 -0.1 22 5-26 8-29 (46)
97 2ytb_A Zinc finger protein 32; 31.6 8.1 0.00028 19.3 -0.4 23 5-27 7-29 (42)
98 2el4_A Zinc finger protein 268 31.5 9 0.00031 19.5 -0.2 22 5-26 8-29 (46)
99 2cur_A Skeletal muscle LIM-pro 31.3 16 0.00054 21.1 0.9 11 10-20 32-42 (69)
100 2eoh_A Zinc finger protein 28 31.3 8.6 0.00029 19.8 -0.3 22 5-26 8-29 (46)
101 2emm_A ZFP-95, zinc finger pro 31.3 9.2 0.00031 19.5 -0.2 22 5-26 8-29 (46)
102 2eif_A IF-5A, protein (eukaryo 31.2 39 0.0013 23.1 3.0 30 31-60 39-68 (136)
103 2ytp_A Zinc finger protein 484 31.1 10 0.00035 19.5 -0.0 22 5-26 8-29 (46)
104 2emg_A Zinc finger protein 484 31.1 7.5 0.00026 19.9 -0.6 22 5-26 8-29 (46)
105 2eln_A Zinc finger protein 406 31.0 8 0.00027 20.5 -0.5 22 5-26 5-28 (38)
106 2emf_A Zinc finger protein 484 30.9 10 0.00035 19.5 -0.0 22 5-26 8-29 (46)
107 2ema_A Zinc finger protein 347 30.8 10 0.00035 19.4 -0.0 22 5-26 8-29 (46)
108 2yso_A ZFP-95, zinc finger pro 30.7 9.7 0.00033 19.5 -0.1 22 5-26 8-29 (46)
109 2eml_A Zinc finger protein 28 30.6 9.2 0.00031 19.6 -0.2 22 5-26 8-29 (46)
110 2em4_A Zinc finger protein 28 30.6 10 0.00034 19.5 -0.1 22 5-26 8-29 (46)
111 2emp_A Zinc finger protein 347 30.6 9.8 0.00034 19.5 -0.1 22 5-26 8-29 (46)
112 1ard_A Yeast transcription fac 30.5 5.1 0.00017 18.0 -1.2 17 9-25 2-18 (29)
113 2em9_A Zinc finger protein 224 30.5 9.8 0.00034 19.4 -0.1 22 5-26 8-29 (46)
114 1x68_A FHL5 protein; four-and- 30.4 16 0.00054 21.6 0.8 10 12-21 8-17 (76)
115 2ep3_A Zinc finger protein 484 30.4 9.7 0.00033 19.5 -0.2 22 5-26 8-29 (46)
116 2enc_A Zinc finger protein 224 30.4 9.7 0.00033 19.5 -0.2 22 5-26 8-29 (46)
117 2ep2_A Zinc finger protein 484 30.4 9.4 0.00032 19.5 -0.2 23 5-27 8-30 (46)
118 2eq0_A Zinc finger protein 347 30.1 10 0.00036 19.4 -0.1 22 5-26 8-29 (46)
119 2emi_A Zinc finger protein 484 30.1 10 0.00035 19.4 -0.1 22 5-26 8-29 (46)
120 2epx_A Zinc finger protein 28 30.0 9.5 0.00032 19.5 -0.3 23 5-27 8-30 (47)
121 2eon_A ZFP-95, zinc finger pro 30.0 7.8 0.00027 20.0 -0.6 22 5-26 8-29 (46)
122 2em3_A Zinc finger protein 28 29.8 9.7 0.00033 19.5 -0.2 22 5-26 8-29 (46)
123 2en8_A Zinc finger protein 224 29.8 10 0.00035 19.3 -0.2 22 5-26 8-29 (46)
124 2egq_A FHL1 protein; LIM domai 29.6 11 0.00037 22.2 -0.1 11 11-21 17-27 (77)
125 2emz_A ZFP-95, zinc finger pro 29.6 9.2 0.00032 19.6 -0.4 22 5-26 8-29 (46)
126 2emy_A Zinc finger protein 268 29.5 11 0.00038 19.3 -0.0 22 5-26 8-29 (46)
127 2eoz_A Zinc finger protein 473 29.5 5.3 0.00018 20.6 -1.4 22 5-26 8-29 (46)
128 2ytk_A Zinc finger protein 347 29.4 10 0.00035 19.4 -0.2 22 5-26 8-29 (46)
129 4gzn_C ZFP-57, zinc finger pro 29.4 8.2 0.00028 22.4 -0.6 20 6-25 29-48 (60)
130 2en7_A Zinc finger protein 268 29.3 8 0.00027 19.5 -0.6 22 5-26 8-29 (44)
131 2epz_A Zinc finger protein 28 29.3 9.8 0.00034 19.5 -0.3 22 5-26 8-29 (46)
132 2ytj_A Zinc finger protein 484 29.2 9.7 0.00033 19.5 -0.3 22 5-26 8-29 (46)
133 2el6_A Zinc finger protein 268 29.2 10 0.00036 19.4 -0.2 22 5-26 8-29 (46)
134 2eop_A Zinc finger protein 268 29.2 8.7 0.0003 19.6 -0.5 22 5-26 8-29 (46)
135 2ehe_A Four and A half LIM dom 29.0 15 0.00053 21.9 0.6 17 11-27 17-33 (82)
136 2yto_A Zinc finger protein 484 29.0 11 0.00039 19.3 -0.1 22 5-26 8-29 (46)
137 2epu_A Zinc finger protein 32; 28.9 6 0.00021 20.3 -1.2 22 5-26 8-29 (45)
138 2eq4_A Zinc finger protein 224 28.7 9.3 0.00032 19.5 -0.4 22 5-26 8-29 (46)
139 2em6_A Zinc finger protein 224 28.7 9.9 0.00034 19.5 -0.3 22 5-26 8-29 (46)
140 1ncs_A Peptide M30F, transcrip 28.6 28 0.00096 18.0 1.6 21 6-26 15-37 (47)
141 2elz_A Zinc finger protein 224 28.6 9.4 0.00032 19.6 -0.4 22 5-26 8-29 (46)
142 2en9_A Zinc finger protein 28 28.6 9.6 0.00033 19.6 -0.4 22 5-26 8-29 (46)
143 2ep1_A Zinc finger protein 484 28.5 8.4 0.00029 19.7 -0.7 22 5-26 8-29 (46)
144 2ytn_A Zinc finger protein 347 28.4 9 0.00031 19.6 -0.5 22 5-26 8-29 (46)
145 2em0_A Zinc finger protein 224 28.2 11 0.00038 19.3 -0.2 22 5-26 8-29 (46)
146 1zfd_A SWI5; DNA binding motif 28.0 10 0.00035 17.6 -0.3 19 8-26 2-22 (32)
147 2emh_A Zinc finger protein 484 27.6 11 0.00039 19.2 -0.2 22 5-26 8-29 (46)
148 2emk_A Zinc finger protein 28 27.5 9.8 0.00033 19.5 -0.5 22 5-26 8-29 (46)
149 1a7i_A QCRP2 (LIM1); LIM domai 27.4 25 0.00084 20.9 1.3 11 10-20 35-45 (81)
150 1bkb_A Translation initiation 27.2 50 0.0017 22.4 3.0 30 31-60 37-66 (136)
151 1wyh_A SLIM 2, skeletal muscle 27.2 22 0.00075 20.5 1.0 11 10-20 34-44 (72)
152 2ytq_A Zinc finger protein 268 27.1 10 0.00034 19.5 -0.5 22 5-26 8-29 (46)
153 1rim_A E6APC2 peptide; E6-bind 26.9 7.3 0.00025 18.8 -1.0 18 9-26 2-19 (33)
154 2eps_A POZ-, at HOOK-, and zin 26.9 10 0.00036 20.4 -0.5 23 5-27 8-30 (54)
155 2lt7_A Transcriptional regulat 26.8 9.4 0.00032 25.3 -0.8 24 4-27 17-40 (133)
156 2eq1_A Zinc finger protein 347 26.6 12 0.00041 19.1 -0.2 22 5-26 8-29 (46)
157 2eou_A Zinc finger protein 473 26.2 11 0.00039 19.0 -0.4 22 5-26 8-29 (44)
158 3cpf_A Eukaryotic translation 25.9 44 0.0015 22.9 2.5 31 30-60 34-64 (138)
159 1bbo_A Human enhancer-binding 25.8 9.9 0.00034 20.2 -0.7 21 6-26 26-46 (57)
160 2en1_A Zinc finger protein 224 25.8 9.4 0.00032 19.5 -0.8 22 5-26 8-29 (46)
161 2ysp_A Zinc finger protein 224 25.7 9.4 0.00032 19.5 -0.8 22 5-26 8-29 (46)
162 2eq2_A Zinc finger protein 347 25.6 9.6 0.00033 19.5 -0.8 23 5-27 8-30 (46)
163 2epq_A POZ-, at HOOK-, and zin 25.5 5.5 0.00019 20.5 -1.8 21 6-26 7-27 (45)
164 2en6_A Zinc finger protein 268 25.4 10 0.00035 19.4 -0.7 22 5-26 8-29 (46)
165 2yti_A Zinc finger protein 347 25.1 9.1 0.00031 19.6 -0.9 22 5-26 8-29 (46)
166 2d9h_A Zinc finger protein 692 25.0 12 0.00041 21.4 -0.5 21 6-26 4-24 (78)
167 2ytd_A Zinc finger protein 473 24.9 14 0.00049 18.8 -0.1 22 5-26 8-29 (46)
168 1va1_A Transcription factor SP 24.8 12 0.0004 18.4 -0.5 21 5-25 4-26 (37)
169 2eov_A Zinc finger protein 484 24.5 11 0.00039 19.1 -0.6 22 5-26 8-29 (46)
170 2yt9_A Zinc finger-containing 24.5 18 0.00061 21.1 0.3 23 5-27 3-25 (95)
171 2eoq_A Zinc finger protein 224 24.5 13 0.00043 19.0 -0.4 22 5-26 8-29 (46)
172 2hf1_A Tetraacyldisaccharide-1 24.1 25 0.00084 21.6 0.8 37 8-48 7-46 (68)
173 1bhi_A CRE-BP1, ATF-2; CRE bin 23.7 12 0.00043 18.1 -0.5 21 6-26 3-25 (38)
174 1znf_A 31ST zinc finger from X 23.7 8.1 0.00028 17.1 -1.2 16 10-25 2-17 (27)
175 2cu8_A Cysteine-rich protein 2 23.7 23 0.00078 20.8 0.6 11 10-20 37-47 (76)
176 1wig_A KIAA1808 protein; LIM d 23.5 29 0.00098 20.5 1.1 11 10-20 32-42 (73)
177 2jr6_A UPF0434 protein NMA0874 23.0 25 0.00084 21.6 0.7 37 8-48 7-46 (68)
178 2eoj_A Zinc finger protein 268 23.0 9.1 0.00031 19.3 -1.2 22 5-26 8-29 (44)
179 3er0_A Eukaryotic translation 22.9 66 0.0023 23.0 3.1 31 30-60 58-88 (167)
180 2epp_A POZ-, at HOOK-, and zin 22.8 14 0.00047 22.1 -0.5 24 5-28 9-32 (66)
181 2adr_A ADR1; transcription reg 22.8 12 0.0004 20.2 -0.8 21 6-26 27-47 (60)
182 1x5w_A Zinc finger protein 64, 22.7 13 0.00045 20.8 -0.6 21 6-26 6-26 (70)
183 1x3h_A Leupaxin; paxillin fami 22.7 36 0.0012 20.0 1.4 11 10-20 42-52 (80)
184 1g47_A Pinch protein; LIM doma 22.7 21 0.00073 20.8 0.3 16 11-26 13-28 (77)
185 2ytt_A Zinc finger protein 473 22.3 11 0.00037 19.4 -1.0 22 5-26 8-29 (46)
186 1dxg_A Desulforedoxin; non-hem 22.0 40 0.0014 17.9 1.3 14 7-20 4-17 (36)
187 1jni_A NAPB;, diheme cytochrom 22.0 22 0.00076 24.6 0.4 28 7-34 92-119 (123)
188 2ytr_A Zinc finger protein 347 22.0 10 0.00036 19.3 -1.1 22 5-26 8-29 (46)
189 2ytm_A Zinc finger protein 28 21.9 11 0.00037 19.4 -1.0 22 5-26 8-29 (46)
190 4ayb_P DNA-directed RNA polyme 21.9 35 0.0012 20.1 1.1 17 8-24 2-18 (48)
191 2eoe_A Zinc finger protein 347 21.7 9.1 0.00031 19.5 -1.4 22 5-26 8-29 (46)
192 2eq3_A Zinc finger protein 347 21.7 9.4 0.00032 19.5 -1.3 22 5-26 8-29 (46)
193 2ct1_A Transcriptional repress 21.5 18 0.00062 20.6 -0.2 23 5-27 11-33 (77)
194 1f2i_G Fusion of N-terminal 17 21.5 15 0.0005 20.6 -0.6 11 8-18 48-58 (73)
195 1iml_A CRIP, cysteine rich int 21.3 34 0.0012 20.0 1.1 14 9-22 27-40 (76)
196 1zr9_A Zinc finger protein 593 21.3 5.7 0.0002 27.4 -2.8 25 3-27 44-68 (124)
197 2lce_A B-cell lymphoma 6 prote 21.1 14 0.00049 20.9 -0.7 23 5-27 13-35 (74)
198 2dar_A PDZ and LIM domain prot 20.7 40 0.0014 20.5 1.3 11 10-20 52-62 (90)
199 1x4k_A Skeletal muscle LIM-pro 20.6 28 0.00095 20.0 0.6 15 12-26 8-22 (72)
200 1loi_A Cyclic 3',5'-AMP specif 20.6 10 0.00035 19.4 -1.2 14 64-77 4-19 (26)
201 3mjh_B Early endosome antigen 20.5 11 0.00039 20.5 -1.1 18 9-26 5-22 (34)
202 2lv2_A Insulinoma-associated p 20.1 15 0.00053 22.7 -0.7 20 6-25 53-72 (85)
203 3hks_A EIF-5A-2, eukaryotic tr 20.1 78 0.0027 22.6 3.0 30 31-60 57-86 (167)
204 1x6e_A Zinc finger protein 24; 20.1 17 0.00059 20.5 -0.5 21 6-26 11-31 (72)
205 2cuq_A Four and A half LIM dom 20.0 42 0.0014 19.7 1.3 10 10-19 42-51 (80)
No 1
>3eqt_A ATP-dependent RNA helicase DHX58; innate immunity, RIG-I-like helicases, viral RNA detection, LGP2/dsRNA complex, ATP-binding, coiled coil; 2.00A {Homo sapiens} PDB: 2w4r_A 2rqa_A
Probab=96.06 E-value=0.0034 Score=45.22 Aligned_cols=93 Identities=22% Similarity=0.256 Sum_probs=59.2
Q ss_pred CCEEEcccCCCCcCCCCCceec--ceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEEecc
Q 034010 7 RPFFSCRNCLNPLAFHHDLISK--TFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLRAYD 84 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~A~e 84 (106)
.-.+.|++|.+.++..+||-.- +-+=.-+++ |...+.+..+|..-.....+...-..|.|.+|+..+|-....---
T Consensus 11 ~vkllCrkC~~~~C~g~DIr~ie~~HhVnv~p~--F~~~y~~~~~~~~~~k~f~d~~~~g~I~C~~Cgq~WG~~m~yk~~ 88 (145)
T 3eqt_A 11 HVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPN--FSNYYNVSRDPVVINKVFKDWKPGGVISCRNCGEVWGLQMIYKSV 88 (145)
T ss_dssp GCEEEETTTCCEEEEGGGEEEETTTEEEECCGG--GGGGEEEEEEECCCSSCCSSEEEEEEEEETTTCCEEEEEEEETTE
T ss_pred heEEECCCCCeeEEeccceEEeccceEEeeChh--heeeEEeccCCCCCCcccccccCCcEEEchhhChhhHhhEEeccc
Confidence 4568999999999999997433 111011111 123333332333211224556778899999999999887765555
Q ss_pred cCCceecCeEEEEeecc
Q 034010 85 LKQKWKEGNFILEKFKM 101 (106)
Q Consensus 85 ~sqkYKEGkfILE~~~i 101 (106)
+=.-.|.-.|+||...-
T Consensus 89 ~LP~LkIksFVve~~~g 105 (145)
T 3eqt_A 89 KLPVLKVRSMLLETPQG 105 (145)
T ss_dssp EEEEECGGGEEEEETTE
T ss_pred cCceEeEEEEEEEcCCC
Confidence 56777888898887544
No 2
>3ga3_A Interferon-induced helicase C domain-containing protein 1, MDA5; innate immune receptor, RNA biniding, RLR, alternative splicing, antiviral defense; 1.45A {Homo sapiens} PDB: 2rqb_A
Probab=94.60 E-value=0.029 Score=39.79 Aligned_cols=88 Identities=19% Similarity=0.195 Sum_probs=56.7
Q ss_pred CEEEcccCCCCcCCCCCceec--ceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEEeccc
Q 034010 8 PFFSCRNCLNPLAFHHDLISK--TFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLRAYDL 85 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~A~e~ 85 (106)
-.+-|++|.+.++..+||-.- +-+=.-+++ |...+.+..-+...+. ..+...-..|.|. |+..+|-....---+
T Consensus 11 vkllCrkC~~~~C~g~DIR~ie~~HhVnv~p~--F~~~y~~~~~~~~~k~-f~d~~~~g~I~C~-Cgq~WG~~m~yk~~~ 86 (133)
T 3ga3_A 11 ITFLCKNCSVLACSGEDIHVIEKMHHVNMTPE--FKELYIVRENKALQKK-CADYQINGEIICK-CGQAWGTMMVHKGLD 86 (133)
T ss_dssp EEEEETTTCCEEEEGGGCEEETTTEEECCCTG--GGGSEEEECCTTTCEE-CSSCEEEEEEEET-TSCEEEEEEEETTEE
T ss_pred EEEEccCCCeeEEeccceEEeccceEEeeChh--heeeEEecCCCCccch-hccccCCceEEEe-cCChhhhhEEecccc
Confidence 458999999999999997432 211111122 1233433322222233 4677888999999 999988876654444
Q ss_pred CCceecCeEEEEee
Q 034010 86 KQKWKEGNFILEKF 99 (106)
Q Consensus 86 sqkYKEGkfILE~~ 99 (106)
=.-.|.-.|+||..
T Consensus 87 LP~LkIksFVve~~ 100 (133)
T 3ga3_A 87 LPCLKIRNFVVVFK 100 (133)
T ss_dssp EEEECGGGEEEEET
T ss_pred CceEEEEEEEEEcC
Confidence 66778888888863
No 3
>3e0o_A Peptide methionine sulfoxide reductase MSRB; oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.88.1.3 PDB: 1xm0_A 2kzn_A
Probab=94.22 E-value=0.033 Score=40.08 Aligned_cols=67 Identities=18% Similarity=0.224 Sum_probs=42.8
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|+++|=++++ -|....|=--.+..+-+ .+...+|+. -|+.. ..|.|..|+.+||--...
T Consensus 40 ~G~Y~C~~Cg~pLF~S~~----KfdSg~GWPSF~~pi~~-~v~~~~D~s--~gm~R-tEV~C~~Cg~HLGHVF~D 106 (144)
T 3e0o_A 40 EGLYVDIVSGKPLFTSKD----KFDSQCGWPSFTKPIEE-EVEEKLDTS--HGMIR-TEVRSRTADSHLGHVFND 106 (144)
T ss_dssp SEEEEETTTCCEEEETTT----BCCCTTSSCEESCCSTT-TEEEEEECC--TTSCE-EEEEETTTCCEEEEEESC
T ss_pred CEEEEeCCCCcccccCcc----cccCCCCCcccCchhcc-ceEEeecCC--CCceE-EEEEcCCCCCccCCccCC
Confidence 458999999999877653 46666773333343333 333344432 24432 469999999999986543
No 4
>3lrr_A Probable ATP-dependent RNA helicase DDX58; innate immunity, viral RNA, RIG-I like receptors, antiviral ATP-binding, helicase, hydrolase; HET: ATP; 2.15A {Homo sapiens} PDB: 3lrn_A* 3og8_A 2rmj_A 3ncu_A*
Probab=94.20 E-value=0.027 Score=39.25 Aligned_cols=89 Identities=22% Similarity=0.339 Sum_probs=57.9
Q ss_pred CCCEEEcccCCCCcCCCCCceec--ceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeec--cCCCceeeEEEE
Q 034010 6 GRPFFSCRNCLNPLAFHHDLISK--TFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCS--NCGQELGWHYLR 81 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~--~C~~~lGWkY~~ 81 (106)
|...+.|++|.+.+++.+||-.- +-+=.-+++| ...+.+...+. .+. ..+.++-..|.|. +|+..+|-....
T Consensus 2 ~~~~llC~kC~~~~C~g~DIr~ie~~HhVnv~p~F--~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 77 (121)
T 3lrr_A 2 ENKKLLCRKCKALACYTADVRVIEESHYTVLGDAF--KECFVSRPHPK-PKQ-FSSFEKRAKIFCARQNCSHDWGIHVKY 77 (121)
T ss_dssp CCEEEEETTTCCEEEEGGGEEEETTTEEEECSHHH--HTTEEEEECSS-CCE-ETTEEEEEEEEECSTTTCCEEEEEEEE
T ss_pred CCEEEECCCCCeEEEeccceEEeecceEEeeChhh--eeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhheEEe
Confidence 56779999999999999997322 1111111111 23333322222 222 3567888999999 999999987765
Q ss_pred ecccCCceecCeEEEEe
Q 034010 82 AYDLKQKWKEGNFILEK 98 (106)
Q Consensus 82 A~e~sqkYKEGkfILE~ 98 (106)
---+=.-.|.-.|+||.
T Consensus 78 k~~~LP~LkI~sfvve~ 94 (121)
T 3lrr_A 78 KTFEIPVIKIESFVVED 94 (121)
T ss_dssp TTEEEEEECGGGEEEEE
T ss_pred ccccCceEEEEEEEEEe
Confidence 54456777888888886
No 5
>2qfd_A Probable ATP-dependent RNA helicase DDX58; zinc finger, alternative splicing, antiviral defense, ATP- binding, hydrolase, immune response; 2.70A {Homo sapiens} PDB: 2qfb_A
Probab=93.91 E-value=0.07 Score=38.32 Aligned_cols=81 Identities=23% Similarity=0.390 Sum_probs=56.5
Q ss_pred CCCEEEcccCCCCcCCCCCc----------eecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeec--cCCC
Q 034010 6 GRPFFSCRNCLNPLAFHHDL----------ISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCS--NCGQ 73 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l----------iSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~--~C~~ 73 (106)
+.-.+.|++|.+.+++.+|| +.+.|. ..+.+..-+.. + ...+..+-..|+|. +|+.
T Consensus 24 ~~v~llCrkC~~~~C~g~DIrvie~~HhV~v~p~F~----------~~y~v~~~~~~-k-~f~d~~~~g~I~C~~~~Cg~ 91 (145)
T 2qfd_A 24 ENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFK----------ECFVSRPHPKP-K-QFSSFEKRAKIFCARQNCSH 91 (145)
T ss_dssp CCCEEEETTTCCEEEEGGGEEEETTTEEEECSTTGG----------GTEEEEECSSC-C-CCSSEEEEEEEEECSTTTCC
T ss_pred cceEEEccCCCeeEEcccceeEecCCcEEecCcCce----------eeEEEcCCccc-c-hhhceeCCceEEeCCcccCc
Confidence 34568999999999999998 444554 22333311111 1 25566788999999 9999
Q ss_pred ceeeEEEEecccCCceecCeEEEEe
Q 034010 74 ELGWHYLRAYDLKQKWKEGNFILEK 98 (106)
Q Consensus 74 ~lGWkY~~A~e~sqkYKEGkfILE~ 98 (106)
.+|-....---+-.-.|.-.|+||.
T Consensus 92 ~WG~~m~yk~~~lP~LkIksFVv~~ 116 (145)
T 2qfd_A 92 DWGIHVKYKTFEIPVIKIESFVVED 116 (145)
T ss_dssp EEEEEEEETTEEEEEECGGGEEEEC
T ss_pred chhceEEEccccCceEEEEEEEEEe
Confidence 9998765544446677888899986
No 6
>3hcg_A Peptide methionine sulfoxide reductase MSRA/MSRB; PILB, methionine sulfoxide reductase B, reduced form, disulfide bond; 1.82A {Neisseria meningitidis serogroup A} SCOP: b.88.1.3 PDB: 3hch_A* 1l1d_A
Probab=93.82 E-value=0.053 Score=39.07 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=41.7
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|+++|=+++ .-|....|=.-.+..+-.-.+...+|+. -|+. -..|.|+.|+.+||--...
T Consensus 41 ~G~Y~C~~Cg~pLF~S~----~KFdSg~GWPSF~~pi~~~~v~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~D 108 (146)
T 3hcg_A 41 PGIYVDVVSGEPLFSSA----DKYDSGCGWPSFTRPIDAKSVTEHDDFS--YNMR-RTEVRSHAADSHLGHVFPD 108 (146)
T ss_dssp SEEEEETTTCCEEEEGG----GEECCSSSSCEESSCSSGGGEEEEEEEE--TTEE-EEEEEETTTCCEEEEEESC
T ss_pred CEEEEecCCCcccccCc----ccccCCCCChhhccccCCCceEEeecCC--CCcE-EEEEEeCCCCCccCceeCC
Confidence 45899999999987654 3476667733333333211122233332 2443 3578999999999986544
No 7
>2kv1_A Methionine-R-sulfoxide reductase B1; MSRB1, SELR, metal-binding, nucleus, oxidoreductase, seleniu; NMR {Mus musculus}
Probab=93.62 E-value=0.048 Score=38.35 Aligned_cols=63 Identities=19% Similarity=0.418 Sum_probs=38.4
Q ss_pred CEEEcccCCCCcCCCCCceecceeCCCC-cEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEE
Q 034010 8 PFFSCRNCLNPLAFHHDLISKTFKAQTG-QAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHY 79 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liSk~f~G~~G-~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY 79 (106)
-+|.|+.|.++|=+.++ -|....| ++| +..+-.-.+-..+++ .+.. ...|.|++|+.+||=-.
T Consensus 19 G~Y~C~~Cg~pLF~S~~----KfdSg~GWPSF-~~~i~~~~v~~~~d~---~~~~-r~Ev~C~~Cg~HLGHVF 82 (124)
T 2kv1_A 19 GVYVCAKCSYELFSSHS----KYAHSSPWPAF-TETIHPDSVTKCPEK---NRPE-ALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp EEEEETTTCCBCCCTTS----CCCCCSSSCCB-SCCCCCSSCEEEECS---SSTT-CEEEECTTTTCCCEEEC
T ss_pred EEEEecCCCCcccccCC----cccCCCCCcee-ecccccceEEEEecc---CCce-EEEEEEecCCCccCCcc
Confidence 48999999999987765 3666666 443 232211111112222 1221 35799999999999743
No 8
>2kao_A Methionine-R-sulfoxide reductase B1; mouse reduced methionine sulfoxide reductase B1 (MSRB1) (SEC95Cys mutant, selenocysteine; NMR {Mus musculus} PDB: 2kv1_A
Probab=93.36 E-value=0.069 Score=37.52 Aligned_cols=65 Identities=17% Similarity=0.359 Sum_probs=38.4
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHY 79 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY 79 (106)
+-+|.|+.|.++|=+.++ -|....|=.-.+..+-.-.+...++.. + +.-..|.|+.|+.+||=-.
T Consensus 18 ~GiY~C~~Cg~pLF~S~~----KFdSG~GWPSF~~pi~~~~v~~~~D~~---~-~~RtEV~C~~Cg~HLGHVF 82 (124)
T 2kao_A 18 PGVYVCAKCSYELFSSHS----KYAHSSPWPAFTETIHPDSVTKCPEKN---R-PEALKVSCGKCGNGLGHEF 82 (124)
T ss_dssp CCEEEESSSCCCCCCTTT----SCCCCCSSCCBSCCCCCSSCEEEECSS---C-TTCEEEECTTTTCCCEEEC
T ss_pred CEEEEeCCCCCccccCcc----cccCCCCChhhCccCCccceEEEecCC---C-CCEEEEEeCCCCCcCCccC
Confidence 468999999999987764 355555622222222111111112211 1 1236899999999999755
No 9
>3cxk_A Methionine-R-sulfoxide reductase; structural genomics, MSRB, oxidoreductase, MIC labcard, PSI-2, protein structure initiative; 1.70A {Burkholderia pseudomallei strain} PDB: 3cez_A
Probab=93.32 E-value=0.046 Score=40.06 Aligned_cols=67 Identities=24% Similarity=0.441 Sum_probs=41.8
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYL 80 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~ 80 (106)
+-+|.|+.|+++|=+.++ -|....|=.-.+..+-+-.+...+|.. -|+ .-..|.|..|+.+||--..
T Consensus 71 ~GiY~C~~Cg~pLF~S~~----KFdSGcGWPSF~~pi~~~~V~~~~D~s--~gm-~RtEV~C~~Cg~HLGHVF~ 137 (164)
T 3cxk_A 71 AGIYHCVVCGTALFESGA----KYHSGCGWPSYFKPIDGEVIDEKMDYT--HGM-TRVEVRCNQCGAHLGHVFE 137 (164)
T ss_dssp SEEEEETTTCCEEEEGGG----BCCCCSSSCEESSCSSTTSEEEEEECG--GGC-CEEEEEETTTCCEEEEEES
T ss_pred CeEEEccCCCccccCCch----hccCCCCCcccCcccCCCceEEeECCC--CCc-EEEEEEeCCCCCccCcccC
Confidence 458999999999876653 466666733333433222222333332 244 3457999999999998554
No 10
>4a2v_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 1.44A {Anas platyrhynchos} PDB: 4a2x_A
Probab=93.19 E-value=0.05 Score=38.44 Aligned_cols=89 Identities=21% Similarity=0.317 Sum_probs=54.2
Q ss_pred CCCEEEcccCCCCcCCCCCceec--ceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeec--cCCCceeeEEEE
Q 034010 6 GRPFFSCRNCLNPLAFHHDLISK--TFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCS--NCGQELGWHYLR 81 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~liSk--~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~--~C~~~lGWkY~~ 81 (106)
|...+.|++|.+.++..+||-.- +-+=.-+++ |...+.+..-+. .+. .-+.++-..|.|. +|+..+|-....
T Consensus 4 ~~~kllCrkC~~~vC~g~DIr~ie~~HhVnv~p~--F~~~y~~~~~~~-~k~-f~d~~~~g~I~C~~~~Cg~~WG~~m~y 79 (131)
T 4a2v_A 4 GQKNLLCGKCKAYACSTDDIRIIKDSHHIVLGEA--FKERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKY 79 (131)
T ss_dssp -CCEEEETTTCCEEEEGGGEEEETTTEEEECSSG--GGGGEEEEECCC-CCC-TTSEEEEEEEEESCTTTCCEEEEEEEE
T ss_pred cceEEEccCCCeeEEeccceEEeecceEEeeChh--heeeEEecCCCC-Cch-hhcccCCcEEEeCccccChhhhhhEee
Confidence 45789999999999999997322 111011111 122333322221 222 3466788899999 999998876544
Q ss_pred eccc-CCceecCeEEEEe
Q 034010 82 AYDL-KQKWKEGNFILEK 98 (106)
Q Consensus 82 A~e~-sqkYKEGkfILE~ 98 (106)
---+ =.-.|.-.|+||.
T Consensus 80 k~~~~LP~LkIksFVve~ 97 (131)
T 4a2v_A 80 LTFDNLPVIKIKSFVMES 97 (131)
T ss_dssp TTEEEEEEECGGGEEECC
T ss_pred cCcccCceEeEEEEEEEe
Confidence 3323 4567788888876
No 11
>3mao_A Methionine-R-sulfoxide reductase B1; oxidoreductase, structural genomics consortium, SGC, cytoplasm, metal-binding, nucleus, selenocysteine, zinc; HET: MLI; 1.42A {Homo sapiens}
Probab=92.84 E-value=0.052 Score=37.13 Aligned_cols=65 Identities=14% Similarity=0.348 Sum_probs=39.0
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHY 79 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY 79 (106)
+-+|.|+.|.++|=+.+ .-|....|=.-.+..+-.-.+...++. .+ +.-..|.|+.|+.+||--.
T Consensus 11 ~G~Y~C~~Cg~pLF~S~----~KFdSg~GWPSF~~pi~~~~v~~~~D~---~~-~~RtEV~C~~C~~HLGHVF 75 (105)
T 3mao_A 11 PGVYVCAKCGYELFSSR----SKYAHSSPWPAFTETIHADSVAKRPEH---NR-SEALKVSCGKCGNGLGHEF 75 (105)
T ss_dssp SEEEEETTTCCEEEEGG----GEECCSSSSCEESCCSSTTSEEEEECT---TS-TTEEEEEETTTCCEEEEEE
T ss_pred CEEEEcCCCCCccccCC----cccCCCCCChhhccccCCCceEEEecC---CC-CCEEEEEeCCCCCccCccc
Confidence 45899999999986655 346666673333333321111111221 12 1246899999999999755
No 12
>2k8d_A Peptide methionine sulfoxide reductase MSRB; thermophilic, Zn binding, metal-binding, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=90.06 E-value=0.076 Score=38.44 Aligned_cols=67 Identities=21% Similarity=0.473 Sum_probs=41.7
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCC-cEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTG-QAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G-~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|+++|=++++ -|....| ++| +..+-.-.+...+|+. -|+. -..|.|..|+.+||--...
T Consensus 59 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF-~~pi~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~D 126 (151)
T 2k8d_A 59 DGIYRCICCGTDLFDSET----KFDSGTGWPSF-YDVVSEHNIKLREDRS--LGMV-RCEVLCARCDAHLGHVFDD 126 (151)
T ss_dssp CSEEEETTTTEEEEEGGG----SCCSTTCCSEE-SCCSCTTSEECCCCBT--TSSC-EEEEEETTEEEEEEEEEEC
T ss_pred CEEEEecCCCCcccCCcc----cccCCCCCccc-CcccCCCceEEeeCCC--CCce-EEEEEeCCCCCcCCcccCC
Confidence 458999999999876653 4766677 443 4433221222233332 2333 3568999999999986654
No 13
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=88.71 E-value=0.26 Score=39.29 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=41.5
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCC-cEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTG-QAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G-~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
+-+|.|+.|+++|=+++ .-|....| ++| +..+-.-.+...+|+. -|+. -..|.|..|+.+||--...
T Consensus 207 ~G~Y~c~~cg~pLF~S~----~KfdSg~GWPSF-~~~i~~~~v~~~~D~s--~gm~-RtEv~c~~c~~HLGHVF~D 274 (313)
T 3e0m_A 207 EGIYVDITTGEPLFFAK----DKFASGCGWPSF-SRPLSKELIHYYKDLS--HGME-RIEVRSRSGSAHLGHVFTD 274 (313)
T ss_dssp SEEEEETTTCCEEEEGG----GBCCCCSSSCEE-SSCSSGGGEEEEEECC--TTCC-EEEEEESSSCCEEEEEESC
T ss_pred CeEEEecCCCccccCCC----ccccCCCCCccc-CcccCCCceEEeecCC--CCcE-EEEEECCCCCCccCcccCC
Confidence 45899999999986654 34776677 442 3333111122223332 2443 3579999999999985543
No 14
>3hcj_A MSRB, peptide methionine sulfoxide reductase; methionine sulfoxide reductase B, oxidized form, oxidoreductase; 1.66A {Xanthomonas campestris PV} PDB: 3hci_A*
Probab=88.09 E-value=0.097 Score=38.01 Aligned_cols=66 Identities=26% Similarity=0.514 Sum_probs=38.5
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCC-cEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEE
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTG-QAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYL 80 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G-~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~ 80 (106)
+-+|.|+.|+++|=++++ -|....| ++| +..+-.-.+...+|.. -|+. =..|.|..|+.+||--..
T Consensus 48 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPSF-~~pi~~~~v~~~~D~s--~gm~-RtEV~C~~Cg~HLGHVF~ 114 (154)
T 3hcj_A 48 DGVYTCRLCGLPLFRSNA----KFDSGTGWPSF-FAPYDPAHVREIRDTS--YGMI-RTEIVCARCDSHLGHVFP 114 (154)
T ss_dssp SEEEEETTTCCEEEEECT----TCCCCTTSSTT-EEESCGGGEEEECCTT--TTTS-CEEEEETTTCCEEEEEES
T ss_pred CEEEEccCCCCccccCcc----cccCCCCCccc-ccccCccceEEeecCC--CCce-EEEEEeCCCCCccCCccC
Confidence 458999999999876653 4655566 332 2222111111122221 2333 257899999999997554
No 15
>2l1u_A MSRB2, methionine-R-sulfoxide reductase B2, mitochondria; methionine sulfoxide reductase, oxidoreductase; NMR {Mus musculus}
Probab=86.70 E-value=0.19 Score=36.06 Aligned_cols=66 Identities=24% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCC-cEEEeeccccc--------ccCcceeeeeecccEEEeeeeeccCCCceee
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTG-QAYMFSNAMNV--------VLGRKEDKQMITGMYTIAKIYCSNCGQELGW 77 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G-~AyLf~~v~Nv--------~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGW 77 (106)
+-+|.|+.|+++|=++++ -|....| ++ |.+.+++ .+...+|.. -|+. -..|.|+.|+.+||=
T Consensus 35 ~G~Y~C~~Cg~pLF~S~~----KFdSg~GWPS--F~~pi~~~~~~~~~~~V~~~~D~s--~gm~-RtEV~C~~Cg~HLGH 105 (143)
T 2l1u_A 35 TGMYHCVCCDSPLFSSEK----KYCSGTGWPS--FSEAYGSKGSDESHTGILRRLDTS--LGCP-RMEVVCKQCEAHLGH 105 (143)
T ss_dssp CEEEEESSSSCEEEEGGG----BCTTTTCCSB--BSSCCSCCTTHHHHTCEEEEEECT--TSSC-EEEEEESSSCCCCEE
T ss_pred CeEEEeCCCCCeeecCcc----cccCCCCChh--hchhhccccccCCCCceEEeeccc--CCce-EEEEEECCCCCcCCc
Confidence 458999999999876653 4655555 33 2333321 111122221 1333 356999999999998
Q ss_pred EEEE
Q 034010 78 HYLR 81 (106)
Q Consensus 78 kY~~ 81 (106)
-...
T Consensus 106 VF~D 109 (143)
T 2l1u_A 106 VFPD 109 (143)
T ss_dssp EECC
T ss_pred ccCC
Confidence 6643
No 16
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=74.94 E-value=0.91 Score=37.10 Aligned_cols=92 Identities=18% Similarity=0.178 Sum_probs=45.7
Q ss_pred cCCCCEEEcccCCCCcCCCCCcee-ccee-CCCCcEEEeecccccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 4 FDGRPFFSCRNCLNPLAFHHDLIS-KTFK-AQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~liS-k~f~-G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
........|.+|.+.++..+||-. ++-+ =.-.++ |.....+. .+..-.....+......|+|. |+..+|-.+..
T Consensus 581 ~~~~~~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~c~-~~~~~g~~~~~ 656 (699)
T 4gl2_A 581 NPSLITFLCKNCSVLACSGEDIHVIEKMHHVNMTPE--FKELYIVR-ENKTLQKKCADYQINGEIICK-CGQAWGTMMVH 656 (699)
T ss_dssp -CCSEEEEESSSCCEEEEGGGCEEETTTEEECCCHH--HHHHCEEC----------------CEEECS-SSCEEEEECCC
T ss_pred CcceeEEECCCCCcEEEehhheeeeccCceEeeCcc--hhhheeec-CCCccchhhhccccCCcEEee-cCchhhHHeeE
Confidence 334445789999999999988743 2111 011111 12333332 222111234667778899999 99999876654
Q ss_pred ecccCCceecCeEEEEee
Q 034010 82 AYDLKQKWKEGNFILEKF 99 (106)
Q Consensus 82 A~e~sqkYKEGkfILE~~ 99 (106)
---+=.-.|.=.|++|..
T Consensus 657 ~~~~~p~~~~~~~~~~~~ 674 (699)
T 4gl2_A 657 KGLDLPCLKIRNFVVVFK 674 (699)
T ss_dssp C---CEEECGGGEEEEET
T ss_pred cccccceeEEEEEEEEcC
Confidence 434455566667777653
No 17
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=65.50 E-value=4.1 Score=33.18 Aligned_cols=87 Identities=24% Similarity=0.381 Sum_probs=53.6
Q ss_pred CEEEcccCCCCcCCCCCc--eecceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeec--cCCCceeeEEEEec
Q 034010 8 PFFSCRNCLNPLAFHHDL--ISKTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCS--NCGQELGWHYLRAY 83 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l--iSk~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~--~C~~~lGWkY~~A~ 83 (106)
....|.+|...++..++| +..+.+=.-.++ |.+-+.+..- +..+. .........|+|. +|+..+|-.+..-.
T Consensus 577 ~~~~c~~c~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~ 652 (696)
T 2ykg_A 577 KKLLCRKCKALACYTADVRVIEDCHYTVLGDA--FKECFVSRPH-PKPKQ-FSSFEKRAKIFCARQNCSHDWGIHVKYKT 652 (696)
T ss_dssp EEEEESSSCCEEEEGGGEEEETTTEEEECSTT--GGGTEEEEEE-EEEEE-CSSCEEEEEEEESSTTTCCEEEEEEEETT
T ss_pred hhhhccCCCceeeecchhhhhcCCCeeecCHH--hHhHeeeccC-Ccccc-ccccccCCceEeCCCCCCccccceEEEcc
Confidence 346799999999999885 333222222233 2222222211 11222 3456667889999 99999998875444
Q ss_pred ccCCceecCeEEEEe
Q 034010 84 DLKQKWKEGNFILEK 98 (106)
Q Consensus 84 e~sqkYKEGkfILE~ 98 (106)
-+=...|...|++|.
T Consensus 653 ~~lp~~~~~~~~~~~ 667 (696)
T 2ykg_A 653 FEIPVIKIESFVVED 667 (696)
T ss_dssp EEEEEECGGGEEEEE
T ss_pred eecceeeeeeEEEEe
Confidence 456667788888885
No 18
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=64.67 E-value=0.57 Score=25.27 Aligned_cols=24 Identities=17% Similarity=0.184 Sum_probs=19.4
Q ss_pred cCCCCEEEcccCCCCcCCCCCcee
Q 034010 4 FDGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~liS 27 (106)
+.|++.|.|..|..-++..+.|..
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~ 26 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEA 26 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHccC
Confidence 567899999999988887766643
No 19
>1x6m_A GFA, glutathione-dependent formaldehyde-activating ENZ; Zn-enzyme, 3_10 helix, lyase; 2.35A {Paracoccus denitrificans} SCOP: b.88.1.4 PDB: 1xa8_A*
Probab=60.63 E-value=16 Score=26.25 Aligned_cols=36 Identities=17% Similarity=0.281 Sum_probs=21.6
Q ss_pred ccccCcceeeeeecccEEEeeeeeccCCCceeeEEEE
Q 034010 45 NVVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHYLR 81 (106)
Q Consensus 45 Nv~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY~~ 81 (106)
.+..|+..-+....|. .+.--||..|++.|-|..+.
T Consensus 79 ~~~~G~~~l~~y~ss~-~~~r~FC~~CGs~l~~~~~~ 114 (196)
T 1x6m_A 79 EVLEGAEKLEIVNAEA-PIQRHRCRDCGVHMYGRIEN 114 (196)
T ss_dssp EEEECGGGEEESCTTS-SEEEEEETTTCCEEEEEECC
T ss_pred EEecCCCceEEEeCCC-CeeeEECCCCCCcCCccccc
Confidence 3334544333333333 35667999999999886543
No 20
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=56.16 E-value=2.4 Score=37.03 Aligned_cols=87 Identities=20% Similarity=0.296 Sum_probs=0.0
Q ss_pred CEEEcccCCCCcCCCCCcee--cceeCCCCcEEEeecccccccCcceeeeeecccEEEeeeeec--cCCCceeeEEEEec
Q 034010 8 PFFSCRNCLNPLAFHHDLIS--KTFKAQTGQAYMFSNAMNVVLGRKEDKQMITGMYTIAKIYCS--NCGQELGWHYLRAY 83 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~liS--k~f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h~V~dI~C~--~C~~~lGWkY~~A~ 83 (106)
..+.|.+|...++..+||-. .+-+=.-+++| ...+++..-+. .+. .-..+....|+|. +|+..+|-....--
T Consensus 811 ~~~~c~~c~~~~~~~~d~~~~~~~~~~~~~~~f--~~~~~~~~~~~-~~~-~~~~~~~~~~~c~~~~c~~~~g~~~~~~~ 886 (936)
T 4a2w_A 811 KNLLCGKCKAYACSTDDIRIIKDSHHIVLGEAF--KERYTTKPHKK-PMQ-FDGFEKKSKMYCRNNNCQHDWGITVKYLT 886 (936)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEcCCCCceeechhhheeecCCCeEecChhh--hhheeccCCCC-cch-hhcccCCceEEeCccccChHhhhheEecc
Confidence 35789999999999999732 22111122333 22223322222 222 4456677899999 99999887653321
Q ss_pred cc-CCceecCeEEEEe
Q 034010 84 DL-KQKWKEGNFILEK 98 (106)
Q Consensus 84 e~-sqkYKEGkfILE~ 98 (106)
-+ =.-.|.-.|++|.
T Consensus 887 ~~~~p~~~~~~~~~~~ 902 (936)
T 4a2w_A 887 FDNLPVIKIKSFVMES 902 (936)
T ss_dssp ----------------
T ss_pred cccCceeeeeeEEEEe
Confidence 11 3344555566665
No 21
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=56.01 E-value=1.8 Score=20.99 Aligned_cols=21 Identities=29% Similarity=0.648 Sum_probs=16.1
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.+.|.|..|..-+...+.|.
T Consensus 4 ~~k~~~C~~C~k~f~~~~~l~ 24 (35)
T 1srk_A 4 GKRPFVCRICLSAFTTKANCA 24 (35)
T ss_dssp CCSCEECSSSCCEESSHHHHH
T ss_pred CCcCeeCCCCCcccCCHHHHH
Confidence 568899999998777665543
No 22
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=60.56 E-value=2.4 Score=19.07 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=14.7
Q ss_pred CEEEcccCCCCcCCCCCce
Q 034010 8 PFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
+.|.|..|+.-++..+.|.
T Consensus 1 kp~~C~~C~k~f~~~~~l~ 19 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLA 19 (26)
Confidence 3689999998887776664
No 23
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=53.40 E-value=2 Score=20.67 Aligned_cols=21 Identities=24% Similarity=0.437 Sum_probs=15.8
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.+.|.|..|..-++..+.|.
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~ 24 (35)
T 2elx_A 4 GSSGYVCALCLKKFVSSIRLR 24 (35)
T ss_dssp CCCSEECSSSCCEESSHHHHH
T ss_pred CCCCeECCCCcchhCCHHHHH
Confidence 567899999988777665553
No 24
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.33 E-value=2.7 Score=20.93 Aligned_cols=21 Identities=14% Similarity=0.352 Sum_probs=15.8
Q ss_pred CCCCEEEcccCCCCcCCCCCc
Q 034010 5 DGRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.|+++|.|..|..-++..+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~L 25 (37)
T 2elm_A 5 SSGHLYYCSQCHYSSITKNCL 25 (37)
T ss_dssp SSSCEEECSSSSCEEECHHHH
T ss_pred CCCcCeECCCCCcccCCHHHH
Confidence 467899999998776665544
No 25
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.32 E-value=3.1 Score=20.43 Aligned_cols=21 Identities=19% Similarity=0.265 Sum_probs=15.9
Q ss_pred CCCCEEEcccCCCCcCCC-CCc
Q 034010 5 DGRPFFSCRNCLNPLAFH-HDL 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~-~~l 25 (106)
.+.+.|.|..|..-++.. +.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~~L 26 (37)
T 2elp_A 5 SSGRAMKCPYCDFYFMKNGSDL 26 (37)
T ss_dssp CCCCCEECSSSSCEECSSCHHH
T ss_pred CCCCCeECCCCChhhccCHHHH
Confidence 356889999998877765 554
No 26
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=52.08 E-value=2.1 Score=21.06 Aligned_cols=22 Identities=23% Similarity=0.481 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|...+...+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~l~ 28 (37)
T 1p7a_A 7 TGIKPFQCPDCDRSFSRSDHLA 28 (37)
T ss_dssp CCSSSBCCTTTCCCBSSHHHHH
T ss_pred CCCCCccCCCCCcccCcHHHHH
Confidence 3568899999998777655543
No 27
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.77 E-value=2.4 Score=20.74 Aligned_cols=21 Identities=14% Similarity=0.357 Sum_probs=15.3
Q ss_pred CCCCEEEcccCCCCcCCCCCc
Q 034010 5 DGRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~l 25 (106)
.+.+.|.|..|..-+...+.|
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elv_A 5 SSGLLYDCHICERKFKNELDR 25 (36)
T ss_dssp CCCCCEECSSSCCEESSHHHH
T ss_pred CCCCCeECCCCCCccCCHHHH
Confidence 356789999998776655544
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=51.17 E-value=3.7 Score=18.41 Aligned_cols=19 Identities=16% Similarity=0.261 Sum_probs=14.5
Q ss_pred CEEEcccCCCCcCCCCCce
Q 034010 8 PFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
+.|.|..|...+...+.|.
T Consensus 1 k~~~C~~C~~~f~~~~~l~ 19 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLK 19 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHH
T ss_pred CCCcCCCCCcccCCHHHHH
Confidence 3588999998887776654
No 29
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.64 E-value=2.4 Score=20.75 Aligned_cols=22 Identities=18% Similarity=0.279 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.++|.|..|..-+...+.|.
T Consensus 5 ~~~k~~~C~~C~k~f~~~~~l~ 26 (36)
T 2elq_A 5 SSGKPFKCSLCEYATRSKSNLK 26 (36)
T ss_dssp CCCCSEECSSSSCEESCHHHHH
T ss_pred CCCCCccCCCCCchhCCHHHHH
Confidence 3568899999998777655543
No 30
>3fac_A Putative uncharacterized protein; complete proteome, structural genomics, PSI-2, protein structure initiative; 2.50A {Rhodobacter sphaeroides 2}
Probab=50.46 E-value=13 Score=24.17 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=20.2
Q ss_pred cccCcceeeeeecccEEEeeeeeccCCCceeeEE
Q 034010 46 VVLGRKEDKQMITGMYTIAKIYCSNCGQELGWHY 79 (106)
Q Consensus 46 v~~g~~e~r~m~TG~h~V~dI~C~~C~~~lGWkY 79 (106)
+..|+..-+....+...+.--||..|++.|-|..
T Consensus 48 ~~~g~~~l~~y~~s~~~~~r~FC~~CGs~l~~~~ 81 (118)
T 3fac_A 48 VVRGAENLTLYQFGTRTAKHWFCRTCGIYTHHQR 81 (118)
T ss_dssp EEECGGGEEEECCTTSCSEEEEETTTCCEEEEEC
T ss_pred EcCChhHceEEecCCCCEeeEECCCCCccccCcc
Confidence 3345433233332333456679999999998854
No 31
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=50.32 E-value=2.1 Score=19.53 Aligned_cols=18 Identities=22% Similarity=0.318 Sum_probs=13.4
Q ss_pred CEEEcccCCCCcCCCCCc
Q 034010 8 PFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
+.|.|..|+..+...+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSAM 19 (27)
T ss_dssp CCEECSSSSCEESSHHHH
T ss_pred cCccCCCcChhhCCHHHH
Confidence 579999998877665544
No 32
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=55.48 E-value=3.4 Score=18.85 Aligned_cols=19 Identities=21% Similarity=0.338 Sum_probs=14.7
Q ss_pred CEEEcccCCCCcCCCCCce
Q 034010 8 PFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
+.|.|..|...+...+.|.
T Consensus 2 k~~~C~~C~k~f~~~~~l~ 20 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQ 20 (30)
Confidence 5689999998877766654
No 33
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=48.36 E-value=2.9 Score=21.10 Aligned_cols=22 Identities=18% Similarity=0.437 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 7 ~~~~~~~C~~C~k~f~~~~~l~ 28 (42)
T 2epc_A 7 GGETPYLCGQCGKSFTQRGSLA 28 (42)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4578899999998777665554
No 34
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.96 E-value=2.7 Score=20.39 Aligned_cols=20 Identities=20% Similarity=0.453 Sum_probs=15.0
Q ss_pred CCCEEEcccCCCCcCCCCCc
Q 034010 6 GRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l 25 (106)
+.+.|.|..|...+...+.|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKANL 25 (36)
T ss_dssp CCCSEECSSSSCEESSHHHH
T ss_pred CCCCCCCCCCCcccCCHHHH
Confidence 56789999998877665544
No 35
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.93 E-value=3.8 Score=20.95 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=17.2
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2yu5_A 8 AGENPFKCSKCDRVFTQRNYLV 29 (44)
T ss_dssp SCCCSEECSSSSCEESSSHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 3568899999998887776654
No 36
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=46.95 E-value=3 Score=20.90 Aligned_cols=21 Identities=14% Similarity=0.256 Sum_probs=16.2
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+++.|.|..|..-+...+.|.
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~ 23 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALG 23 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHH
T ss_pred CCCceECCCCCcccCCHHHHH
Confidence 567899999998777666554
No 37
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.51 E-value=2.4 Score=20.80 Aligned_cols=23 Identities=13% Similarity=0.197 Sum_probs=16.8
Q ss_pred cCCCCEEEcccCCCCcCCCCCce
Q 034010 4 FDGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~li 26 (106)
-.+.+.|.|..|..-++..+.|.
T Consensus 4 h~~~k~~~C~~C~k~f~~~~~l~ 26 (37)
T 2elo_A 4 GSSGRSYSCPVCEKSFSEDRLIK 26 (37)
T ss_dssp CCCCCCCEETTTTEECSSHHHHH
T ss_pred CCCCCCcCCCCCCCccCCHHHHH
Confidence 34678899999988776655543
No 38
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.29 E-value=3.1 Score=20.27 Aligned_cols=20 Identities=30% Similarity=0.766 Sum_probs=15.2
Q ss_pred CCCEEEcccCCCCcCCCCCc
Q 034010 6 GRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l 25 (106)
+.+.|.|..|...+...+.|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l 25 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKHSL 25 (36)
T ss_dssp CCCCEECTTTCCEESSHHHH
T ss_pred CCCCEECCCCCceeCCHHHH
Confidence 46789999998877665544
No 39
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=46.21 E-value=2.6 Score=19.19 Aligned_cols=18 Identities=22% Similarity=0.632 Sum_probs=13.5
Q ss_pred CEEEcccCCCCcCCCCCc
Q 034010 8 PFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
+.|.|..|...++..+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQM 19 (28)
T ss_dssp CSEECSSSCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 569999998877665544
No 40
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.80 E-value=3 Score=21.07 Aligned_cols=22 Identities=18% Similarity=0.378 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|++.|.|..|..-++..+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2en2_A 7 GGEKPYKCETCGARFVQVAHLR 28 (42)
T ss_dssp CSSCSEECTTTCCEESSHHHHH
T ss_pred CCCCCEeCCCcChhhCCHHHHH
Confidence 4678899999988777665554
No 41
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=45.03 E-value=4.1 Score=18.47 Aligned_cols=19 Identities=21% Similarity=0.429 Sum_probs=13.8
Q ss_pred CEEEcccCCCCcCCCCCce
Q 034010 8 PFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
+.|.|..|...++..+.|.
T Consensus 1 k~~~C~~C~k~f~~~~~l~ 19 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLT 19 (29)
T ss_dssp CCEECSSSSCEESCSHHHH
T ss_pred CCccCCCCCchhCCHHHHH
Confidence 3589999988777666553
No 42
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=44.53 E-value=3 Score=18.90 Aligned_cols=18 Identities=11% Similarity=0.263 Sum_probs=13.4
Q ss_pred CEEEcccCCCCcCCCCCc
Q 034010 8 PFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
+.|.|..|..-+.....|
T Consensus 2 k~~~C~~C~~~f~~~~~l 19 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSK 19 (30)
T ss_dssp CCEECTTTCCEESCHHHH
T ss_pred cCccCCCCCcccCCHHHH
Confidence 579999998877665544
No 43
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=50.20 E-value=4.7 Score=18.36 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=14.3
Q ss_pred CEEEcccCCCCcCCCCCce
Q 034010 8 PFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~li 26 (106)
+.|.|..|..-++..+.|.
T Consensus 1 k~~~C~~C~k~f~~~~~l~ 19 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLI 19 (29)
Confidence 3588999988877776664
No 44
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.03 E-value=2.8 Score=20.29 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|...++..+.|.
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~l~ 26 (36)
T 2elr_A 5 SSGKTHLCDMCGKKFKSKGTLK 26 (36)
T ss_dssp CCCSSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeecCcCCCCcCchHHHH
Confidence 3567899999998877665553
No 45
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.04 E-value=3.6 Score=20.87 Aligned_cols=22 Identities=18% Similarity=0.403 Sum_probs=17.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~ 28 (42)
T 2eos_A 7 GGEKPYPCEICGTRFRHLQTLK 28 (42)
T ss_dssp SSSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCCEECCCCCCccCCHHHHH
Confidence 4568899999998887766654
No 46
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.31 E-value=4.1 Score=20.48 Aligned_cols=22 Identities=18% Similarity=0.564 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (41)
T 2ept_A 6 SGQRVYECQECGKSFRQKGSLT 27 (41)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCCCcCCHHHHH
Confidence 3568899999988777665554
No 47
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=41.20 E-value=4.5 Score=18.23 Aligned_cols=18 Identities=22% Similarity=0.351 Sum_probs=14.1
Q ss_pred EEEcccCCCCcCCCCCce
Q 034010 9 FFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
.|.|..|...++..+.|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1klr_A 2 TYQCQYCEFRSADSSNLK 19 (30)
T ss_dssp CCCCSSSSCCCSCSHHHH
T ss_pred CccCCCCCCccCCHHHHH
Confidence 588999998888776654
No 48
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=40.47 E-value=10 Score=19.44 Aligned_cols=23 Identities=22% Similarity=0.387 Sum_probs=18.4
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2ely_A 8 TGEKPFKCVECGKGFSRRSALNV 30 (46)
T ss_dssp CCCCSBCCSSSCCCBSSTTHHHH
T ss_pred CCCCCcccCccCcccCCHHHHHH
Confidence 45688999999998888777653
No 49
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.47 E-value=8.5 Score=19.78 Aligned_cols=22 Identities=18% Similarity=0.477 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoy_A 8 QKEKCFKCNKCEKTFSCSKYLT 29 (46)
T ss_dssp CCSCCEECSSSCCEESSSHHHH
T ss_pred CCCCCEECcCCCCcCCCHHHHH
Confidence 4578899999998777766654
No 50
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=40.25 E-value=4.5 Score=21.62 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=16.5
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.+.|.|..|..-+...+.|.
T Consensus 4 ~~kp~~C~~C~k~F~~~~~L~ 24 (48)
T 3iuf_A 4 RDKPYACDICGKRYKNRPGLS 24 (48)
T ss_dssp TTSCEECTTTCCEESSHHHHH
T ss_pred CCcCEECCCcCcccCCHHHHH
Confidence 568899999998777666654
No 51
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=40.06 E-value=8.6 Score=22.08 Aligned_cols=11 Identities=36% Similarity=1.077 Sum_probs=8.1
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (66)
T 1nyp_A 32 FVCAKCEKPFL 42 (66)
T ss_dssp CBCTTTCCBCS
T ss_pred CEECCCCCCCC
Confidence 67777777775
No 52
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=38.15 E-value=13 Score=20.81 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=9.5
Q ss_pred CCCEEEcccCCCCcCC
Q 034010 6 GRPFFSCRNCLNPLAF 21 (106)
Q Consensus 6 g~~~y~C~~C~thLa~ 21 (106)
|++.|.|..|+.-++.
T Consensus 11 ~~k~~~C~~C~k~F~~ 26 (62)
T 1vd4_A 11 NRASFKCPVCSSTFTD 26 (62)
T ss_dssp SSSEEECSSSCCEEEH
T ss_pred CCCCccCCCCCchhcc
Confidence 4566677766664443
No 53
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=38.09 E-value=8 Score=22.39 Aligned_cols=13 Identities=31% Similarity=0.600 Sum_probs=8.9
Q ss_pred CEEEcccCCCCcC
Q 034010 8 PFFSCRNCLNPLA 20 (106)
Q Consensus 8 ~~y~C~~C~thLa 20 (106)
.-|.|..|+.+|.
T Consensus 31 ~CF~C~~C~~~L~ 43 (65)
T 2iyb_E 31 ECFLCSCCSKCLI 43 (65)
T ss_dssp TTSBCTTTCCBCT
T ss_pred CCEECCCCCCcCC
Confidence 3467777777775
No 54
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=38.07 E-value=9.1 Score=19.59 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=17.2
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yu8_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCSSEECSSSCCEESSSHHHH
T ss_pred CCCCCeECCcCCchhCCHHHHH
Confidence 4578899999998887776654
No 55
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=37.89 E-value=4.3 Score=18.55 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=13.2
Q ss_pred EEEcccCCCCcCCCCCce
Q 034010 9 FFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
.|.|..|...+...+.|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~ 19 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLI 19 (30)
T ss_dssp CSBCTTTCCBCSSSHHHH
T ss_pred CcCCcccCcccCChHHHH
Confidence 588999988777666553
No 56
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.16 E-value=13 Score=21.54 Aligned_cols=10 Identities=40% Similarity=1.019 Sum_probs=6.1
Q ss_pred EEcccCCCCc
Q 034010 10 FSCRNCLNPL 19 (106)
Q Consensus 10 y~C~~C~thL 19 (106)
|.|..|+.+|
T Consensus 34 F~C~~C~~~L 43 (72)
T 1x61_A 34 FVCSTCRAQL 43 (72)
T ss_dssp CBCSSSCCBC
T ss_pred CcccccCCcC
Confidence 5566666666
No 57
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.15 E-value=5 Score=20.58 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=16.8
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+.+.|.|..|...+...+.|.
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~ 27 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEEASLK 27 (43)
T ss_dssp SSCCBCCSSSCCCBSSHHHHH
T ss_pred CCCCEECCCCCCeeCChHHHH
Confidence 567899999998888766654
No 58
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=36.95 E-value=3.9 Score=21.95 Aligned_cols=21 Identities=19% Similarity=0.176 Sum_probs=13.1
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.+.|.|..|..-+...+.|.
T Consensus 1 g~~~~~C~~C~~~f~~~~~l~ 21 (57)
T 3uk3_C 1 GSSSRECSYCGKFFRSNYYLN 21 (57)
T ss_dssp ----CBCTTTCCBCSCHHHHH
T ss_pred CCCCccCCCCcchhCChHHHH
Confidence 457889999988777766654
No 59
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.52 E-value=7 Score=19.87 Aligned_cols=22 Identities=23% Similarity=0.615 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2emb_A 8 HTRKRYECSKCQATFNLRKHLI 29 (44)
T ss_dssp CCCSSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4568899999998777665554
No 60
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=36.48 E-value=2.9 Score=19.21 Aligned_cols=18 Identities=11% Similarity=0.242 Sum_probs=12.5
Q ss_pred CEEEcccCCCCcCCCCCc
Q 034010 8 PFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~l 25 (106)
+.|.|..|+.-++..+.|
T Consensus 2 k~~~C~~C~k~f~~~~~l 19 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLASM 19 (27)
T ss_dssp CTEEETTTTEEESCHHHH
T ss_pred cCcCCCCCCcccCCHHHH
Confidence 569999998766654443
No 61
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.32 E-value=5.5 Score=19.94 Aligned_cols=22 Identities=23% Similarity=0.612 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2yte_A 6 SGEKPYSCAECKETFSDNNRLV 27 (42)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4568899999998777766554
No 62
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.84 E-value=10 Score=19.30 Aligned_cols=23 Identities=22% Similarity=0.527 Sum_probs=17.6
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+++.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2epw_A 8 TGEKPCKCTECGKAFCWKSQLIM 30 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHHH
T ss_pred CCCCCeeCCCCCCccCCHHHHHH
Confidence 45688999999888777766643
No 63
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.81 E-value=10 Score=19.37 Aligned_cols=22 Identities=23% Similarity=0.600 Sum_probs=17.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en3_A 8 TGEKPFQCKECGMNFSWSCSLF 29 (46)
T ss_dssp CCCCSEECSSSCCEESSSHHHH
T ss_pred CCCCCeeCcccChhhCCHHHHH
Confidence 3568899999998887776664
No 64
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.73 E-value=15 Score=20.47 Aligned_cols=20 Identities=25% Similarity=0.318 Sum_probs=11.4
Q ss_pred CCCEEEcc-cCCCCcCCCCCc
Q 034010 6 GRPFFSCR-NCLNPLAFHHDL 25 (106)
Q Consensus 6 g~~~y~C~-~C~thLa~~~~l 25 (106)
+.+.|.|. .|..-+...++|
T Consensus 33 ~~~p~~C~~~C~k~f~~~~~L 53 (66)
T 2eod_A 33 PRLPVACPNQCGVGTVAREDL 53 (66)
T ss_dssp SSSEEECTTCCSCCEEETTTH
T ss_pred CCcCccCCcccCcccccHHHH
Confidence 45666666 666655544444
No 65
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.29 E-value=7.6 Score=19.99 Aligned_cols=22 Identities=27% Similarity=0.629 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoo_A 8 SGERPYGCNECGKNFGRHSHLI 29 (46)
T ss_dssp SCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEEccccCcccCCHHHHH
Confidence 4678899999988777666554
No 66
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=35.21 E-value=7 Score=19.58 Aligned_cols=22 Identities=23% Similarity=0.560 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|..-++..+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (42)
T 2el5_A 6 SGENPYECSECGKAFNRKDQLI 27 (42)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCccCCCcChhhCCHHHHH
Confidence 4568899999988777766554
No 67
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=34.41 E-value=4.9 Score=18.01 Aligned_cols=17 Identities=24% Similarity=0.552 Sum_probs=12.1
Q ss_pred EEEcccCCCCcCCCCCc
Q 034010 9 FFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~l 25 (106)
.|.|..|..-+.....|
T Consensus 2 ~~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNL 18 (29)
T ss_dssp CEECTTTSCEESCHHHH
T ss_pred CccCCCCCCccCChhHH
Confidence 58899998766655444
No 68
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.03 E-value=7.7 Score=19.98 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=16.2
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em8_A 8 SGEKPYKCVECGKGYKRRLDLD 29 (46)
T ss_dssp CSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECcccCchhCCHHHHH
Confidence 4678899999987776655543
No 69
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.79 E-value=14 Score=21.35 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=6.7
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (70)
T 2d8z_A 32 FVCTACRKQLS 42 (70)
T ss_dssp SBCSSSCCBCT
T ss_pred CccCCCCCcCC
Confidence 55666666664
No 70
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.72 E-value=8 Score=19.76 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (44)
T 2epv_A 8 SGEKPYECNECGKAFIWKSLLI 29 (44)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCchHHHH
Confidence 4568899999998777666554
No 71
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.66 E-value=8.1 Score=19.74 Aligned_cols=22 Identities=27% Similarity=0.653 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytf_A 8 TGEKPFECSECQKAFNTKSNLI 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCcCCCCCCcccCCHHHHH
Confidence 4568899999988777666554
No 72
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.62 E-value=7.6 Score=19.85 Aligned_cols=22 Identities=18% Similarity=0.418 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yts_A 8 TGEKPYICNECGKSFIQKSHLN 29 (46)
T ss_dssp CSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCEECCCCChhhCChHHHH
Confidence 4568899999988777766654
No 73
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.46 E-value=7.9 Score=19.92 Aligned_cols=23 Identities=26% Similarity=0.515 Sum_probs=17.8
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2yth_A 8 SGEKPFQCEECGKRFTQNSHLHS 30 (46)
T ss_dssp CCSSSBCCSSSCCCBSSHHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHHH
Confidence 45688999999988877766643
No 74
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=33.39 E-value=34 Score=23.48 Aligned_cols=32 Identities=16% Similarity=0.050 Sum_probs=26.9
Q ss_pred eeCCCCcEEEeecccccccCcceeeeeecccE
Q 034010 30 FKAQTGQAYMFSNAMNVVLGRKEDKQMITGMY 61 (106)
Q Consensus 30 f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~h 61 (106)
=.|++|.|+.=-++.|+..|...++.+-+|--
T Consensus 34 KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ 65 (138)
T 1iz6_A 34 SPGKHGSAKARIEAVGIFDGKVRSIVKPTSAE 65 (138)
T ss_dssp CCCTTSCCEEEEEEEETTTCCEEEEEEETTSE
T ss_pred cCCCCCceEEEEEEEECCCCCEEEEEecCCCE
Confidence 36899999988899999999998887777653
No 75
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.36 E-value=10 Score=19.49 Aligned_cols=23 Identities=22% Similarity=0.574 Sum_probs=17.9
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~~ 30 (46)
T 2enh_A 8 TGEKPYECDVCRKAFSHHASLTQ 30 (46)
T ss_dssp CCSSSCBCTTTCCBCSSSHHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHHH
Confidence 45688999999988887776653
No 76
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.24 E-value=11 Score=19.23 Aligned_cols=23 Identities=22% Similarity=0.423 Sum_probs=17.4
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2ytg_A 8 TGEKPFKCGECGKSYNQRVHLTQ 30 (46)
T ss_dssp SSCCSEECTTTCCEESSSHHHHT
T ss_pred CCCCCeECCCCCcccCCHHHHHH
Confidence 45688999999988777666643
No 77
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.19 E-value=8.9 Score=19.57 Aligned_cols=22 Identities=18% Similarity=0.484 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eow_A 8 TGEKPYKCNECGKAFRARSSLA 29 (46)
T ss_dssp CCCCCEECTTSCCEESSHHHHH
T ss_pred CCCCCeeccccCChhcCHHHHH
Confidence 4578899999988777665554
No 78
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=33.16 E-value=6 Score=21.91 Aligned_cols=23 Identities=13% Similarity=0.468 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.|++.|.|..|...+...+.|..
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~l~~ 28 (66)
T 2drp_A 6 EGEHTYRCKVCSRVYTHISNFCR 28 (66)
T ss_dssp EETTEEECTTTCCEESSHHHHHH
T ss_pred CCCcceECCCCcchhCCHHHHHH
Confidence 35689999999887776665543
No 79
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.09 E-value=8.5 Score=19.80 Aligned_cols=22 Identities=14% Similarity=0.347 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em5_A 8 SSTKSHQCHECGRGFTLKSHLN 29 (46)
T ss_dssp CCSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCCccCCHHHHH
Confidence 4568899999998777766554
No 80
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=33.06 E-value=6.9 Score=21.14 Aligned_cols=21 Identities=14% Similarity=0.271 Sum_probs=15.8
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|.+.|.|..|..-+...+.|.
T Consensus 21 ~~k~~~C~~C~k~f~~~~~L~ 41 (54)
T 1yui_A 21 SEQPATCPICYAVIRQSRNLR 41 (54)
T ss_dssp SSCCEECTTTCCEESSHHHHH
T ss_pred CCCCccCCCCCcccCCHHHHH
Confidence 567899999988776655543
No 81
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.99 E-value=28 Score=19.03 Aligned_cols=23 Identities=17% Similarity=0.151 Sum_probs=18.8
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-+...+.|..
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~ 36 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc
Confidence 45788999999988888777765
No 82
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=32.72 E-value=17 Score=25.39 Aligned_cols=29 Identities=17% Similarity=0.394 Sum_probs=25.2
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCCC
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQTG 35 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~G 35 (106)
++.|-|..|+++=+...-||.-.|....+
T Consensus 93 p~RYfCtQCHVpQada~PlV~N~F~~~~~ 121 (130)
T 1ogy_B 93 PRRYFCTACHVPQTNAQPLVTNEFRDMLT 121 (130)
T ss_dssp STTCCGGGTCCBCBCCCCSSCBCCBCSSS
T ss_pred ccceecccccCccccCccccccccccchh
Confidence 46799999999999999999999986654
No 83
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.65 E-value=9.6 Score=19.30 Aligned_cols=22 Identities=14% Similarity=0.369 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (44)
T 2eox_A 8 TDSKSYNCNECGKAFTRIFHLT 29 (44)
T ss_dssp CCCCCEEETTTTEEESSSHHHH
T ss_pred CCCCCeECcccCcccCCHHHHH
Confidence 3568899999987777666554
No 84
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=32.48 E-value=17 Score=21.10 Aligned_cols=11 Identities=36% Similarity=1.023 Sum_probs=6.7
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 36 F~C~~C~~~L~ 46 (72)
T 1x4l_A 36 FNCKKCSLSLV 46 (72)
T ss_dssp CBCSSSCCBCT
T ss_pred CEeccCCCcCC
Confidence 56666666654
No 85
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.34 E-value=8.2 Score=19.72 Aligned_cols=22 Identities=18% Similarity=0.514 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eor_A 8 TGEKPYNCEECGKAFIHDSQLQ 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCcCccCCCCCCCcCCHHHHH
Confidence 4568899999988777665554
No 86
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.31 E-value=8.8 Score=19.66 Aligned_cols=22 Identities=23% Similarity=0.554 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em7_A 8 TGEKPYKCEECGKGFICRRDLY 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCccCCCccchhCCHHHHH
Confidence 4568899999988777665554
No 87
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.09 E-value=7.4 Score=19.97 Aligned_cols=22 Identities=18% Similarity=0.532 Sum_probs=17.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2enf_A 8 TGEKPYKCNECGKVFTQNSHLV 29 (46)
T ss_dssp CCCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4578899999998887766654
No 88
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.05 E-value=6.9 Score=20.11 Aligned_cols=22 Identities=18% Similarity=0.552 Sum_probs=16.2
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep0_A 8 TGEKPYKCDVCHKSFRYGSSLT 29 (46)
T ss_dssp TTCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCcccCcccCChHHHH
Confidence 3567899999987776655554
No 89
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=32.02 E-value=8.7 Score=19.76 Aligned_cols=22 Identities=23% Similarity=0.572 Sum_probs=16.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emj_A 8 TGEKPFECAECGKSFSISSQLA 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCEECCCCCcccCCHHHHH
Confidence 4568899999988777665553
No 90
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.94 E-value=8.9 Score=19.58 Aligned_cols=22 Identities=18% Similarity=0.584 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eme_A 8 SGEKPYVCDYCGKAFGLSAELV 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4568899999988777665554
No 91
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.80 E-value=8.3 Score=19.91 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=17.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eom_A 8 HGERGHRCSDCGKFFLQASNFI 29 (46)
T ss_dssp CCCSSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCCeeCChHHHH
Confidence 4578899999998888766654
No 92
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.80 E-value=8.9 Score=19.44 Aligned_cols=22 Identities=23% Similarity=0.523 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|..-+...+.|.
T Consensus 6 ~~~k~~~C~~C~k~f~~~~~L~ 27 (44)
T 2emx_A 6 SGEKPFGCSCCEKAFSSKSYLL 27 (44)
T ss_dssp SSCCCEECSSSSCEESSHHHHH
T ss_pred CCCcCccCCCCCcccCCHHHHH
Confidence 4578899999988777666554
No 93
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.79 E-value=9.7 Score=19.41 Aligned_cols=22 Identities=23% Similarity=0.520 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yrj_A 8 TGEKPYRCGECGKAFAQKANLT 29 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4568899999988777665554
No 94
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.74 E-value=9.4 Score=19.55 Aligned_cols=22 Identities=18% Similarity=0.430 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ene_A 8 TGEKPYKCNECGKVFRHNSYLS 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCChHHHH
Confidence 4578899999988777665554
No 95
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.71 E-value=8.7 Score=19.34 Aligned_cols=22 Identities=18% Similarity=0.609 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eof_A 8 TGEKPYECNECQKAFNTKSNLM 29 (44)
T ss_dssp SCCCSEECTTTCCEESCHHHHH
T ss_pred CCCCCeECCCCCcccCCHhHHH
Confidence 4567899999998777766554
No 96
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.71 E-value=9.1 Score=19.67 Aligned_cols=22 Identities=23% Similarity=0.529 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em2_A 8 SGEKPFKCKECGKAFRQNIHLA 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEECCcCCchhCCHHHHH
Confidence 4568899999988777666554
No 97
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.60 E-value=8.1 Score=19.26 Aligned_cols=23 Identities=22% Similarity=0.507 Sum_probs=17.4
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.|.+.|.|..|..-++..+.|..
T Consensus 7 ~~~k~~~C~~C~k~f~~~~~L~~ 29 (42)
T 2ytb_A 7 GGEKPYRCDQCGKAFSQKGSLIV 29 (42)
T ss_dssp CSCCSBCCTTTTCCBSSHHHHHT
T ss_pred CCCCCeeCCCccchhCCHHHHHH
Confidence 45688999999988877666543
No 98
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=31.47 E-value=9 Score=19.55 Aligned_cols=22 Identities=23% Similarity=0.656 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el4_A 8 TGVKPYGCSQCAKTFSLKSQLI 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 4568899999988777766654
No 99
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.32 E-value=16 Score=21.09 Aligned_cols=11 Identities=45% Similarity=0.969 Sum_probs=5.2
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 32 F~C~~C~~~L~ 42 (69)
T 2cur_A 32 FVCVTCSKKLA 42 (69)
T ss_dssp TBCTTTCCBCT
T ss_pred CEECCCCCCCC
Confidence 44555554443
No 100
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.29 E-value=8.6 Score=19.78 Aligned_cols=22 Identities=18% Similarity=0.495 Sum_probs=17.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoh_A 8 SGKKPYECKECRKTFIQIGHLN 29 (46)
T ss_dssp CCSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCcCchhCCHHHHH
Confidence 4568899999998888766654
No 101
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.28 E-value=9.2 Score=19.52 Aligned_cols=22 Identities=23% Similarity=0.445 Sum_probs=16.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emm_A 8 TGERPHKCNECGKSFIQSAHLI 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCCCCChhhCCHHHHH
Confidence 4568899999988777665543
No 102
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=31.21 E-value=39 Score=23.05 Aligned_cols=30 Identities=13% Similarity=0.015 Sum_probs=25.2
Q ss_pred eCCCCcEEEeecccccccCcceeeeeeccc
Q 034010 31 KAQTGQAYMFSNAMNVVLGRKEDKQMITGM 60 (106)
Q Consensus 31 ~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 60 (106)
.|++|.|+.=-++.|+..|...++.+.+|-
T Consensus 39 pGKhG~A~vr~k~knl~tG~~~e~tf~s~~ 68 (136)
T 2eif_A 39 PGKHGGAKARVVGIGIFEKVKKEFVAPTSS 68 (136)
T ss_dssp CCSSSCCEEEEEEEESSSCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEEcCCCCeEEEEecCCC
Confidence 589999998889999999988877776664
No 103
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.13 E-value=10 Score=19.47 Aligned_cols=22 Identities=27% Similarity=0.626 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytp_A 8 TGERHYECSECGKAFARKSTLI 29 (46)
T ss_dssp CCCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCcCCcccCCHHHHH
Confidence 4568899999988777666554
No 104
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.08 E-value=7.5 Score=19.95 Aligned_cols=22 Identities=27% Similarity=0.588 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emg_A 8 TGENPFICSECGKVFTHKTNLI 29 (46)
T ss_dssp CSCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 4567899999998877766654
No 105
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.04 E-value=8 Score=20.54 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=16.8
Q ss_pred CCCCEEEccc--CCCCcCCCCCce
Q 034010 5 DGRPFFSCRN--CLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~--C~thLa~~~~li 26 (106)
.|+++|.|.. |..-++..+.|.
T Consensus 5 ~gekp~~C~~~~C~k~F~~~~~L~ 28 (38)
T 2eln_A 5 SSGILLKCPTDGCDYSTPDKYKLQ 28 (38)
T ss_dssp SCCCCEECSSSSCCCEESCHHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHHH
Confidence 4678999986 998887766553
No 106
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.92 E-value=10 Score=19.46 Aligned_cols=22 Identities=23% Similarity=0.523 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emf_A 8 TGGKHFECTECGKAFTRKSTLS 29 (46)
T ss_dssp SSSCCEECSSSCCEESCHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4568899999988777666554
No 107
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=30.83 E-value=10 Score=19.39 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=16.2
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ema_A 8 TGEKRYKCNECGKVFSRNSQLS 29 (46)
T ss_dssp TTSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCcchhCCHHHHH
Confidence 4578899999987776655554
No 108
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.66 E-value=9.7 Score=19.48 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yso_A 8 SREKSHQCRECGEIFFQYVSLI 29 (46)
T ss_dssp SCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCEEccccChhhCCHHHHH
Confidence 4567899999988777665554
No 109
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.63 E-value=9.2 Score=19.58 Aligned_cols=22 Identities=18% Similarity=0.496 Sum_probs=16.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eml_A 8 TGEKPYECSVCGKAFSHRQSLS 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeeCCCcCCccCCHHHHH
Confidence 4568899999987776665554
No 110
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.58 E-value=10 Score=19.50 Aligned_cols=22 Identities=23% Similarity=0.534 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em4_A 8 TGQRPYECIECGKAFKTKSSLI 29 (46)
T ss_dssp CCSSSEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 4568899999988777666554
No 111
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.57 E-value=9.8 Score=19.46 Aligned_cols=22 Identities=18% Similarity=0.448 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emp_A 8 TGVKPYMCNECGKAFSVYSSLT 29 (46)
T ss_dssp SCCCSEECSSSCCEESCHHHHH
T ss_pred CCCcCeECCCCCchhCCHHHHH
Confidence 4568899999988777665554
No 112
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=30.53 E-value=5.1 Score=18.03 Aligned_cols=17 Identities=29% Similarity=0.606 Sum_probs=12.2
Q ss_pred EEEcccCCCCcCCCCCc
Q 034010 9 FFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~l 25 (106)
.|.|..|..-++..+.|
T Consensus 2 ~~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHL 18 (29)
T ss_dssp CCBCTTTCCBCSSHHHH
T ss_pred CeECCCCCcccCCHHHH
Confidence 58899998777665544
No 113
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=30.47 E-value=9.8 Score=19.39 Aligned_cols=22 Identities=18% Similarity=0.600 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em9_A 8 TGEKPYNCKECGKSFRWASCLL 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCccccccCChHHHH
Confidence 4568899999988777665554
No 114
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.40 E-value=16 Score=21.60 Aligned_cols=10 Identities=30% Similarity=0.856 Sum_probs=5.3
Q ss_pred cccCCCCcCC
Q 034010 12 CRNCLNPLAF 21 (106)
Q Consensus 12 C~~C~thLa~ 21 (106)
|..|+.++..
T Consensus 8 C~~C~~~I~~ 17 (76)
T 1x68_A 8 CVACSKPISG 17 (76)
T ss_dssp CTTTCCCCCT
T ss_pred CccCCCcccC
Confidence 5555555553
No 115
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.38 E-value=9.7 Score=19.48 Aligned_cols=22 Identities=18% Similarity=0.504 Sum_probs=16.7
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep3_A 8 TGEKPYRCAECGKAFTDRSNLF 29 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4567899999988777666554
No 116
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.37 E-value=9.7 Score=19.49 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=16.4
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2enc_A 8 SGEKPFKCEECGKGFYTNSQCY 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCCCcCCCCCCCcCCChHHHH
Confidence 4568899999988777665554
No 117
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.36 E-value=9.4 Score=19.54 Aligned_cols=23 Identities=17% Similarity=0.379 Sum_probs=17.1
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2ep2_A 8 TGEKPYECSICGKSFTKKSQLHV 30 (46)
T ss_dssp SCCCSEECSSSCCEESSHHHHHH
T ss_pred CCCcCcCCCCCCcccCCHHHHHH
Confidence 45688999999887777665543
No 118
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.08 E-value=10 Score=19.36 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eq0_A 8 TGEKPYKCHECGKVFRRNSHLA 29 (46)
T ss_dssp TCCCCEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCCCchhCCHHHHH
Confidence 4568899999988777666554
No 119
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.07 E-value=10 Score=19.39 Aligned_cols=22 Identities=18% Similarity=0.499 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emi_A 8 TGERHYECSECGKAFIQKSTLS 29 (46)
T ss_dssp SSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCCCCCCCCcccCCHHHHH
Confidence 4568899999988777665554
No 120
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.03 E-value=9.5 Score=19.48 Aligned_cols=23 Identities=22% Similarity=0.525 Sum_probs=17.7
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+++.|.|..|..-+...+.|..
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~~ 30 (47)
T 2epx_A 8 TGKKPYECIECGKAFIQNTSLIR 30 (47)
T ss_dssp CCCCSBCCSSSCCCBSSHHHHHH
T ss_pred CCCCCEECCccCchhCChHHHHH
Confidence 45688999999988877766643
No 121
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.95 E-value=7.8 Score=20.02 Aligned_cols=22 Identities=18% Similarity=0.537 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eon_A 8 TGEKPYKCQVCGKAFRVSSHLV 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCcccCCCCCCcccCcHHHHH
Confidence 4568899999998877766554
No 122
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.84 E-value=9.7 Score=19.49 Aligned_cols=22 Identities=18% Similarity=0.513 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em3_A 8 TGEKPYECKVCSKAFTQKAHLA 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 3567899999988777666554
No 123
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.78 E-value=10 Score=19.32 Aligned_cols=22 Identities=18% Similarity=0.472 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en8_A 8 SGEKSHTCDECGKNFCYISALR 29 (46)
T ss_dssp CCCSSEECTTTCCEESSHHHHH
T ss_pred CCCCCeECCCcCcccCCHHHHH
Confidence 4568899999988777666554
No 124
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=29.62 E-value=11 Score=22.24 Aligned_cols=11 Identities=36% Similarity=0.920 Sum_probs=6.6
Q ss_pred EcccCCCCcCC
Q 034010 11 SCRNCLNPLAF 21 (106)
Q Consensus 11 ~C~~C~thLa~ 21 (106)
.|..|+.++..
T Consensus 17 ~C~~C~~~I~~ 27 (77)
T 2egq_A 17 KCAGCKNPITG 27 (77)
T ss_dssp CCSSSCCCCCC
T ss_pred cCcccCCcccC
Confidence 36666666664
No 125
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.57 E-value=9.2 Score=19.65 Aligned_cols=22 Identities=23% Similarity=0.489 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2emz_A 8 SGERPFKCNECGKGFGRRSHLA 29 (46)
T ss_dssp SCCCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4578899999998877766554
No 126
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.52 E-value=11 Score=19.25 Aligned_cols=22 Identities=23% Similarity=0.546 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emy_A 8 TGENPYECHECGKAFSRKYQLI 29 (46)
T ss_dssp CSSCCEECSSSCCEESSHHHHH
T ss_pred CCCcCcCCCCCCcccCcHHHHH
Confidence 4568899999988777666554
No 127
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.51 E-value=5.3 Score=20.64 Aligned_cols=22 Identities=23% Similarity=0.492 Sum_probs=16.3
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoz_A 8 TGEKPYSCNVCGKAFVLSAHLN 29 (46)
T ss_dssp SSCCSEEETTTTEEESSHHHHH
T ss_pred CCCCCeECcccChhhCCHHHHH
Confidence 3567899999988777666554
No 128
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.36 E-value=10 Score=19.41 Aligned_cols=22 Identities=18% Similarity=0.484 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytk_A 8 SGEKPYKCNECGKVFTQNSHLT 29 (46)
T ss_dssp SSSCSEECSSSCCEESSHHHHH
T ss_pred CCCCCEeCCcCCCccCCHHHHH
Confidence 4568899999988777665554
No 129
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=29.36 E-value=8.2 Score=22.43 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=12.7
Q ss_pred CCCEEEcccCCCCcCCCCCc
Q 034010 6 GRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l 25 (106)
|++.|.|..|+.-+...+.|
T Consensus 29 ~ekp~~C~~C~k~F~~~~~L 48 (60)
T 4gzn_C 29 GYRPRSCPECGKCFRDQSEV 48 (60)
T ss_dssp TCCCEECTTTCCEESSHHHH
T ss_pred CCcCeECCCCCCCcCCHHHH
Confidence 45677777777666555444
No 130
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.31 E-value=8 Score=19.49 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2en7_A 8 TGMKPYVCNECGKAFRSKSYLI 29 (44)
T ss_dssp SSSSSSCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHH
Confidence 3567899999998887766654
No 131
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.26 E-value=9.8 Score=19.46 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2epz_A 8 TGEKPFDCIDCGKAFSDHIGLN 29 (46)
T ss_dssp CCCCSBCCTTTCCCBSSHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHH
Confidence 4568899999998877766654
No 132
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.20 E-value=9.7 Score=19.49 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.|.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytj_A 8 TGEKPYICAECGKAFTIRSNLI 29 (46)
T ss_dssp SSCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCChhhCCHHHHH
Confidence 4568899999988777666554
No 133
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=29.20 E-value=10 Score=19.42 Aligned_cols=22 Identities=18% Similarity=0.452 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2el6_A 8 AGVNPYKCSQCEKSFSGKLRLL 29 (46)
T ss_dssp CCCCSEECSSSSCEESSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4578899999988777665554
No 134
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.18 E-value=8.7 Score=19.60 Aligned_cols=22 Identities=32% Similarity=0.729 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eop_A 8 TGEKPHECRECGKSFSFNSQLI 29 (46)
T ss_dssp CCCCSCBCTTTCCBCSSHHHHH
T ss_pred CCCCCeeCCCCCchhCCHHHHH
Confidence 4567899999998877766654
No 135
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.03 E-value=15 Score=21.87 Aligned_cols=17 Identities=12% Similarity=0.430 Sum_probs=11.2
Q ss_pred EcccCCCCcCCCCCcee
Q 034010 11 SCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 11 ~C~~C~thLa~~~~liS 27 (106)
.|..|+.++...+.+|+
T Consensus 17 ~C~~C~~~I~~~~~~~~ 33 (82)
T 2ehe_A 17 TCAECQQLIGHDSRELF 33 (82)
T ss_dssp BCTTTCCBCCSSCCBCC
T ss_pred cCccCCCccccCcEEEE
Confidence 57888887775455544
No 136
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.97 E-value=11 Score=19.28 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2yto_A 8 TGEKPYKCSDCGKAFTRKSGLH 29 (46)
T ss_dssp CSCCCEECSSSCCEESSHHHHH
T ss_pred CCCCCEECcccCCccCCHhHHH
Confidence 3568899999988777766554
No 137
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.93 E-value=6 Score=20.33 Aligned_cols=22 Identities=23% Similarity=0.596 Sum_probs=15.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (45)
T 2epu_A 8 TGQKPFECTHCGKSFRAKGNLV 29 (45)
T ss_dssp CSCCSEEETTTTEEESSHHHHH
T ss_pred CCCcCccCCCCCCccCChHHHH
Confidence 3567899999987766655543
No 138
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.74 E-value=9.3 Score=19.49 Aligned_cols=22 Identities=18% Similarity=0.597 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAPCLL 29 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHHHHH
T ss_pred CCCCCeECCCCCCccCchHHHH
Confidence 4568899999998877766654
No 139
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.66 E-value=9.9 Score=19.52 Aligned_cols=22 Identities=18% Similarity=0.407 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2em6_A 8 MGEKCYKCDVCGKEFSQSSHLQ 29 (46)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHH
Confidence 4568899999998877766654
No 140
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=28.65 E-value=28 Score=18.03 Aligned_cols=21 Identities=14% Similarity=0.361 Sum_probs=16.6
Q ss_pred CCCEEEcc--cCCCCcCCCCCce
Q 034010 6 GRPFFSCR--NCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~--~C~thLa~~~~li 26 (106)
|++.|.|. .|..-++..+.|.
T Consensus 15 ~~k~~~C~~~~C~k~F~~~~~L~ 37 (47)
T 1ncs_A 15 PDKTFECLFPGCTKTFKRRYNIR 37 (47)
T ss_dssp TTTEEECCCTTCCCEECSSSSHH
T ss_pred CCCCeECCCCCCCCccCCHHHHH
Confidence 56899995 7998888777664
No 141
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.63 E-value=9.4 Score=19.62 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2elz_A 8 SVEKPYKCEDCGKGYNRRLNLD 29 (46)
T ss_dssp CCCSSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCeeCcccCchhCCHHHHH
Confidence 4568899999998877766554
No 142
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.59 E-value=9.6 Score=19.57 Aligned_cols=22 Identities=23% Similarity=0.667 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2en9_A 8 AGKKLFKCNECKKTFTQSSSLT 29 (46)
T ss_dssp CSSCCCBCTTTCCBCSSHHHHH
T ss_pred CCCCCEECCccCcccCCHHHHH
Confidence 4568899999998777666554
No 143
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.45 E-value=8.4 Score=19.68 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=17.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ep1_A 8 TGEKPYECSDCGKSFIKKSQLH 29 (46)
T ss_dssp SSCCSSCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 3567899999998887766654
No 144
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.40 E-value=9 Score=19.62 Aligned_cols=22 Identities=18% Similarity=0.508 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2ytn_A 8 TGKKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCSSCBCTTTCCBCSSHHHHH
T ss_pred CCCcCeECCCCCCeeCCHHHHH
Confidence 4568899999998887766654
No 145
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=28.25 E-value=11 Score=19.25 Aligned_cols=22 Identities=23% Similarity=0.392 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2em0_A 8 MGEKTWKCRECDMCFSQASSLR 29 (46)
T ss_dssp CCCCCCCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 4578899999998877766654
No 146
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=28.03 E-value=10 Score=17.60 Aligned_cols=19 Identities=37% Similarity=0.730 Sum_probs=14.5
Q ss_pred CEEEcc--cCCCCcCCCCCce
Q 034010 8 PFFSCR--NCLNPLAFHHDLI 26 (106)
Q Consensus 8 ~~y~C~--~C~thLa~~~~li 26 (106)
+.|.|. .|..-++..+.|.
T Consensus 2 k~~~C~~~~C~k~f~~~~~L~ 22 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLI 22 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHH
T ss_pred CCCcCcCCCCCCccCCHHHHH
Confidence 568898 8988887766654
No 147
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.55 E-value=11 Score=19.20 Aligned_cols=22 Identities=23% Similarity=0.480 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emh_A 8 TGERPYICTVCGKAFTDRSNLI 29 (46)
T ss_dssp SCCCSEECTTTCCEESSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 3568899999988777766554
No 148
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=27.49 E-value=9.8 Score=19.54 Aligned_cols=22 Identities=23% Similarity=0.599 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2emk_A 8 TGEKPYECKECGKAFSQTTHLI 29 (46)
T ss_dssp SSSCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCceECCCCCchhCCHHHHH
Confidence 4567899999998877766654
No 149
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=27.38 E-value=25 Score=20.93 Aligned_cols=11 Identities=36% Similarity=0.769 Sum_probs=5.1
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 35 F~C~~C~~~L~ 45 (81)
T 1a7i_A 35 FLCMVCRKNLD 45 (81)
T ss_dssp EECSSSCCEEC
T ss_pred CccCCCCCCCC
Confidence 44444444443
No 150
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=27.24 E-value=50 Score=22.42 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=26.1
Q ss_pred eCCCCcEEEeecccccccCcceeeeeeccc
Q 034010 31 KAQTGQAYMFSNAMNVVLGRKEDKQMITGM 60 (106)
Q Consensus 31 ~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 60 (106)
.|++|.|+.=-++.|+..|...++.+-+|-
T Consensus 37 pGKgG~A~vr~k~knl~tG~~~e~tf~s~~ 66 (136)
T 1bkb_A 37 TGKHGSAKARIVAVGVFDGGKRTLSLPVDA 66 (136)
T ss_dssp CSTTSCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEECCCCCeEEEEEcCCC
Confidence 699999988889999999999888777765
No 151
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.22 E-value=22 Score=20.47 Aligned_cols=11 Identities=45% Similarity=1.153 Sum_probs=5.1
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 34 F~C~~C~~~L~ 44 (72)
T 1wyh_A 34 FLCSGCEQPLG 44 (72)
T ss_dssp CBCTTTCCBTT
T ss_pred CeECCCCCcCC
Confidence 44444444443
No 152
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.11 E-value=10 Score=19.50 Aligned_cols=22 Identities=23% Similarity=0.517 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytq_A 8 AGEKPYGCSECGKAFSSKSYLI 29 (46)
T ss_dssp SCCCSCBCSSSCCBCSCHHHHH
T ss_pred CCCCCcCCCccChhhCChHHHH
Confidence 4568899999998877766654
No 153
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=26.93 E-value=7.3 Score=18.80 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=13.2
Q ss_pred EEEcccCCCCcCCCCCce
Q 034010 9 FFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
.|.|..|..-++..+.|.
T Consensus 2 p~~C~~C~k~F~~~~~L~ 19 (33)
T 1rim_A 2 KFACPECPKRFMRSDHLS 19 (33)
T ss_dssp CCCCSSSCCCCSSHHHHH
T ss_pred cccCCCCCchhCCHHHHH
Confidence 588999988777665543
No 154
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=26.86 E-value=10 Score=20.40 Aligned_cols=23 Identities=13% Similarity=0.241 Sum_probs=16.3
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+++.|.|..|...+...+.|..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~ 30 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLNG 30 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHHH
Confidence 35678999999877766555443
No 155
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=26.80 E-value=9.4 Score=25.28 Aligned_cols=24 Identities=25% Similarity=0.538 Sum_probs=19.5
Q ss_pred cCCCCEEEcccCCCCcCCCCCcee
Q 034010 4 FDGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 4 l~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+|++.|.|..|..-++..+.|..
T Consensus 17 h~Gek~y~C~~C~k~F~~~~~L~~ 40 (133)
T 2lt7_A 17 VDGRVYYICIVCKRSYVCLTSLRR 40 (133)
T ss_dssp ETTEEEEEETTTCCEESCHHHHHH
T ss_pred cCCCcCeECCCCCCCcCCHHHHHH
Confidence 468889999999988888777764
No 156
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.57 E-value=12 Score=19.09 Aligned_cols=22 Identities=23% Similarity=0.594 Sum_probs=16.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq1_A 8 TGEKPYKCNECGKAFRAHSNLT 29 (46)
T ss_dssp CCSCCCCCTTTTCCCSSHHHHH
T ss_pred CCCCCeECCcCChhhCCHHHHH
Confidence 3568899999998877766654
No 157
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.19 E-value=11 Score=19.05 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eou_A 8 AAKTTSECQECGKIFRHSSLLI 29 (44)
T ss_dssp SSSCCCCCTTTCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCCHHHHH
Confidence 3567899999998887766554
No 158
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=25.89 E-value=44 Score=22.87 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=22.5
Q ss_pred eeCCCCcEEEeecccccccCcceeeeeeccc
Q 034010 30 FKAQTGQAYMFSNAMNVVLGRKEDKQMITGM 60 (106)
Q Consensus 30 f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 60 (106)
=.|++|.|+.--.+.|+..|..-++.+-+|-
T Consensus 34 KpGKgG~A~vr~k~knl~TG~~~e~tf~s~~ 64 (138)
T 3cpf_A 34 KTGKHGHAKVHLVGIDIFTGKKYEDICPSTH 64 (138)
T ss_dssp CC----CCEEEEEEEETTTCCEEEEEEETTS
T ss_pred cCCCCccEEEEEEEEECCCCCEEEEEeCCCC
Confidence 3688999988889999999999888777664
No 159
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=25.83 E-value=9.9 Score=20.20 Aligned_cols=21 Identities=14% Similarity=0.290 Sum_probs=14.9
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+.+.|.|..|...++..+.|.
T Consensus 26 ~~~~~~C~~C~~~f~~~~~l~ 46 (57)
T 1bbo_A 26 DVRPYHCTYCNFSFKTKGNLT 46 (57)
T ss_dssp SCCCEECSSSSCEESSHHHHH
T ss_pred CCCCccCCCCCchhcCHHHHH
Confidence 457799999987776655543
No 160
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.82 E-value=9.4 Score=19.54 Aligned_cols=22 Identities=23% Similarity=0.511 Sum_probs=15.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en1_A 8 SGEKPFKCEECGKRFTQNSQLH 29 (46)
T ss_dssp CCCCSEEETTTTEEESSHHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHHH
Confidence 4568899999987666655543
No 161
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.72 E-value=9.4 Score=19.55 Aligned_cols=22 Identities=18% Similarity=0.404 Sum_probs=15.9
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ysp_A 8 TGEKPYKCEKCGKGYNSKFNLD 29 (46)
T ss_dssp SSCCSEEETTTTEEESCHHHHH
T ss_pred CCCCCeECCCCCCccCCHHHHH
Confidence 4567899999987766655544
No 162
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.63 E-value=9.6 Score=19.49 Aligned_cols=23 Identities=17% Similarity=0.449 Sum_probs=17.5
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-++..+.|..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~ 30 (46)
T 2eq2_A 8 TGGKPYQCNECGKAFSQTSKLAR 30 (46)
T ss_dssp SSSCSSSCCSSCCCCSSHHHHHH
T ss_pred CCCCCeECCCCCcccCCHHHHHH
Confidence 35678999999988877666553
No 163
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=25.50 E-value=5.5 Score=20.50 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=15.5
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+++.|.|..|...+...+.|.
T Consensus 7 ~~k~~~C~~C~k~f~~~~~l~ 27 (45)
T 2epq_A 7 GEKPYSCPVCGLRFKRKDRMS 27 (45)
T ss_dssp SCCSSEETTTTEECSCHHHHH
T ss_pred CCCCCcCCCCCcccCCHHHHH
Confidence 567899999987776655544
No 164
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.42 E-value=10 Score=19.41 Aligned_cols=22 Identities=18% Similarity=0.434 Sum_probs=16.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2en6_A 8 SGEKPYGCNECGKTFSQKSILS 29 (46)
T ss_dssp CSSCCEEETTTTEEESSHHHHH
T ss_pred CCCcCeECCCCCcccCchHHHH
Confidence 4578899999987766655543
No 165
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.06 E-value=9.1 Score=19.61 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~F~~~~~L~ 29 (46)
T 2yti_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCcCeECCCCCcccCChhHHH
Confidence 3567899999998887766654
No 166
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.00 E-value=12 Score=21.39 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=14.6
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
|++.|.|..|..-+.....|.
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~ 24 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLN 24 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHH
Confidence 567888988887666555443
No 167
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.85 E-value=14 Score=18.78 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=16.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytd_A 8 SGEKPYKCSECGKAFHRHTHLN 29 (46)
T ss_dssp CCCCSEECSSSCCEESSHHHHH
T ss_pred CCCcCeECCCCCCeeCChHHHH
Confidence 3567899999987776655543
No 168
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=24.77 E-value=12 Score=18.39 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=15.2
Q ss_pred CCCCEEEcc--cCCCCcCCCCCc
Q 034010 5 DGRPFFSCR--NCLNPLAFHHDL 25 (106)
Q Consensus 5 ~g~~~y~C~--~C~thLa~~~~l 25 (106)
.|.+.|.|. .|..-++..+.|
T Consensus 4 ~~~k~~~C~~~~C~k~f~~~~~L 26 (37)
T 1va1_A 4 GKKKQHICHIQGCGKVYGKTSHL 26 (37)
T ss_dssp SSCCCEECCSTTCCCEESCHHHH
T ss_pred CCCCCCCCCCCCCCCccCCHHHH
Confidence 356889998 598877665554
No 169
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.51 E-value=11 Score=19.11 Aligned_cols=22 Identities=18% Similarity=0.569 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eov_A 8 TGEKPYKCSDCGKSFTWKSRLR 29 (46)
T ss_dssp SSCCSCBCSSSCCBCSSHHHHH
T ss_pred CCCCCccCCccChhhCCHHHHH
Confidence 3567899999988877766554
No 170
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=24.49 E-value=18 Score=21.14 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=18.3
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.|++.|.|..|...+.....|..
T Consensus 3 ~~~~~~~C~~C~~~f~~~~~l~~ 25 (95)
T 2yt9_A 3 SGSSGVACEICGKIFRDVYHLNR 25 (95)
T ss_dssp CCCSCEECSSSCCEESSSHHHHH
T ss_pred CCCCCeECCCCCCccCChHHHHH
Confidence 46788999999988887777654
No 171
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.48 E-value=13 Score=19.00 Aligned_cols=22 Identities=23% Similarity=0.380 Sum_probs=16.8
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eoq_A 8 TGEKPFKCDICGKSFCGRSRLN 29 (46)
T ss_dssp SSSCSCCCSSSCCCCSSHHHHH
T ss_pred CCCCCcCCCcCCchhCCHHHHH
Confidence 4567899999998877766654
No 172
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=24.10 E-value=25 Score=21.64 Aligned_cols=37 Identities=27% Similarity=0.599 Sum_probs=26.7
Q ss_pred CEEEcccCCCCcCCC---CCceecceeCCCCcEEEeeccccccc
Q 034010 8 PFFSCRNCLNPLAFH---HDLISKTFKAQTGQAYMFSNAMNVVL 48 (106)
Q Consensus 8 ~~y~C~~C~thLa~~---~~liSk~f~G~~G~AyLf~~v~Nv~~ 48 (106)
.+..|..|+.+|... ..|+++ .-|+||-++.-+-+-.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (68)
T 2hf1_A 7 EILVCPLCKGPLVFDKSKDELICK----GDRLAFPIKDGIPMML 46 (68)
T ss_dssp EECBCTTTCCBCEEETTTTEEEET----TTTEEEEEETTEECCC
T ss_pred hheECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeeeC
Confidence 367899999998764 446765 4689999986554443
No 173
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.75 E-value=12 Score=18.11 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=15.0
Q ss_pred CCCEEEcc--cCCCCcCCCCCce
Q 034010 6 GRPFFSCR--NCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~--~C~thLa~~~~li 26 (106)
|.+.|.|. .|..-++..+.|.
T Consensus 3 ~~k~~~C~~~~C~k~f~~~~~L~ 25 (38)
T 1bhi_A 3 DDKPFLCTAPGCGQRFTNEDHLA 25 (38)
T ss_dssp TCCCEECCCTTTCCEESSHHHHH
T ss_pred CCcceECCCCCCCcccCCHHHHH
Confidence 56789999 6987766655543
No 174
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=23.73 E-value=8.1 Score=17.06 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=11.4
Q ss_pred EEcccCCCCcCCCCCc
Q 034010 10 FSCRNCLNPLAFHHDL 25 (106)
Q Consensus 10 y~C~~C~thLa~~~~l 25 (106)
|.|..|...+...+.|
T Consensus 2 ~~C~~C~k~f~~~~~l 17 (27)
T 1znf_A 2 YKCGLCERSFVEKSAL 17 (27)
T ss_dssp CBCSSSCCBCSSHHHH
T ss_pred ccCCCCCCcCCCHHHH
Confidence 7788888777665544
No 175
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.66 E-value=23 Score=20.82 Aligned_cols=11 Identities=27% Similarity=0.884 Sum_probs=5.4
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 37 F~C~~C~~~L~ 47 (76)
T 2cu8_A 37 LKCERCSKTLT 47 (76)
T ss_dssp CBCSSSCCBCC
T ss_pred CCCCCCCCccC
Confidence 44555555544
No 176
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.49 E-value=29 Score=20.46 Aligned_cols=11 Identities=27% Similarity=0.461 Sum_probs=7.4
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|+
T Consensus 32 F~C~~C~~~L~ 42 (73)
T 1wig_A 32 ALCVRCGQMFA 42 (73)
T ss_dssp SCCSSSCCCCC
T ss_pred CEeCCCCCCCC
Confidence 66777776665
No 177
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=23.04 E-value=25 Score=21.65 Aligned_cols=37 Identities=24% Similarity=0.460 Sum_probs=26.9
Q ss_pred CEEEcccCCCCcCCC---CCceecceeCCCCcEEEeeccccccc
Q 034010 8 PFFSCRNCLNPLAFH---HDLISKTFKAQTGQAYMFSNAMNVVL 48 (106)
Q Consensus 8 ~~y~C~~C~thLa~~---~~liSk~f~G~~G~AyLf~~v~Nv~~ 48 (106)
.+..|..|+.+|... ..|+++ .-|+||-++.-+-+-.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~----~cg~~YPI~dGIPvmL 46 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSR----QAKLAYPIKDGIPYML 46 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEET----TTTEEEEEETTEECCC
T ss_pred hheECCCCCCcCeEeCCCCEEEcC----CCCcEecCCCCeeeeC
Confidence 367999999998764 447766 4689999986554443
No 178
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.00 E-value=9.1 Score=19.33 Aligned_cols=22 Identities=18% Similarity=0.498 Sum_probs=16.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (44)
T 2eoj_A 8 TGENPYECCECGKVFSRKDQLV 29 (44)
T ss_dssp SSCCSCEETTTTEECSSHHHHH
T ss_pred CCCcCeeCCCCCCccCCHHHHH
Confidence 3567899999987776665554
No 179
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=22.93 E-value=66 Score=22.95 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=26.0
Q ss_pred eeCCCCcEEEeecccccccCcceeeeeeccc
Q 034010 30 FKAQTGQAYMFSNAMNVVLGRKEDKQMITGM 60 (106)
Q Consensus 30 f~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 60 (106)
=.|++|.|+.=-.+.|+..|...++.+-+|-
T Consensus 58 KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~ 88 (167)
T 3er0_A 58 KTGKHGHAKVHLVAIDIFTGKKLEDLSPSTH 88 (167)
T ss_dssp CCSSSSCCEEEEEEEESSSCCCEEEEEESSS
T ss_pred CCCCcCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 3688899998889999999999888776664
No 180
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.84 E-value=14 Score=22.11 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=19.9
Q ss_pred CCCCEEEcccCCCCcCCCCCceec
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLISK 28 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liSk 28 (106)
.+++.|.|..|..-+...+.|..-
T Consensus 9 ~~ekpy~C~~CgK~F~~~s~L~~H 32 (66)
T 2epp_A 9 REAGILPCGLCGKVFTDANRLRQH 32 (66)
T ss_dssp CCCCCCCCTTTCCCCSCHHHHHHH
T ss_pred CCccCcCCCCCCCccCCHHHHHhh
Confidence 457889999999999888887654
No 181
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=22.79 E-value=12 Score=20.17 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=14.6
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+.+.|.|..|...++..+.|.
T Consensus 27 ~~~~~~C~~C~~~f~~~~~l~ 47 (60)
T 2adr_A 27 NEKPYPCGLCNRAFTRRDLLI 47 (60)
T ss_dssp SSCSEECTTTCCEESSHHHHH
T ss_pred CCCCccCCCCCCccCCHHHHH
Confidence 456788888887766655543
No 182
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.74 E-value=13 Score=20.80 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=15.5
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+.+.|.|..|..-++....|.
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~ 26 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALR 26 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH
Confidence 567899999987776655554
No 183
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.74 E-value=36 Score=19.96 Aligned_cols=11 Identities=27% Similarity=1.096 Sum_probs=5.7
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 42 F~C~~C~~~L~ 52 (80)
T 1x3h_A 42 FVCGDCFTSFS 52 (80)
T ss_dssp CBCSSSCCBSC
T ss_pred CChhhCCCCCC
Confidence 45555555554
No 184
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.66 E-value=21 Score=20.81 Aligned_cols=16 Identities=19% Similarity=0.594 Sum_probs=8.7
Q ss_pred EcccCCCCcCCCCCce
Q 034010 11 SCRNCLNPLAFHHDLI 26 (106)
Q Consensus 11 ~C~~C~thLa~~~~li 26 (106)
.|..|+.++...+.++
T Consensus 13 ~C~~C~~~I~~~~~~~ 28 (77)
T 1g47_A 13 TCERCKGGFAPAEKIV 28 (77)
T ss_dssp BCSSSCCBCCSTTTCE
T ss_pred CchhcCCccCCCceEE
Confidence 4666666665444443
No 185
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.26 E-value=11 Score=19.35 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=17.0
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-+...+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytt_A 8 EGEKPYQCSECGKSFSGSYRLT 29 (46)
T ss_dssp SCCCTTCCSSSCCCCSSHHHHH
T ss_pred CCCCCeeCCCCCcccCCHHHHH
Confidence 4567899999998887766654
No 186
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=21.99 E-value=40 Score=17.93 Aligned_cols=14 Identities=14% Similarity=0.475 Sum_probs=10.9
Q ss_pred CCEEEcccCCCCcC
Q 034010 7 RPFFSCRNCLNPLA 20 (106)
Q Consensus 7 ~~~y~C~~C~thLa 20 (106)
..+|.|.+|++-+.
T Consensus 4 ~~fY~C~~CGnive 17 (36)
T 1dxg_A 4 GDVYKCELCGQVVK 17 (36)
T ss_dssp TCEEECTTTCCEEE
T ss_pred ccEEEcCCCCcEEE
Confidence 36899999987654
No 187
>1jni_A NAPB;, diheme cytochrome C NAPB; dihaem cytochrome C, proteolytic fragment, nitrate reductase subunit, oxidoreductase; HET: HEM; 1.25A {Haemophilus influenzae} SCOP: a.138.1.3
Probab=21.98 E-value=22 Score=24.58 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=10.7
Q ss_pred CCEEEcccCCCCcCCCCCceecceeCCC
Q 034010 7 RPFFSCRNCLNPLAFHHDLISKTFKAQT 34 (106)
Q Consensus 7 ~~~y~C~~C~thLa~~~~liSk~f~G~~ 34 (106)
++.|.|..|+++=+...-||.-.|....
T Consensus 92 p~Ry~CtqCHVPQ~~~~PlV~N~F~~~~ 119 (123)
T 1jni_A 92 PRRYFCLQCHVSQANVDPIVPNDFKPMK 119 (123)
T ss_dssp CCSCCGGGTCCC----------------
T ss_pred ccceecccccCCcccccccccCccccch
Confidence 4679999999999999999988887544
No 188
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.97 E-value=10 Score=19.27 Aligned_cols=22 Identities=18% Similarity=0.492 Sum_probs=16.5
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytr_A 8 TGEKPYKCNECGKAFSQTSKLA 29 (46)
T ss_dssp SSCCTTCCTTTCCCCSSHHHHH
T ss_pred CCCcCcCCCCCCCccCCHHHHH
Confidence 3567899999988877766554
No 189
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.94 E-value=11 Score=19.44 Aligned_cols=22 Identities=14% Similarity=0.366 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+++.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2ytm_A 8 TGEKPYKCMECGKAFGDNSSCT 29 (46)
T ss_dssp SSCCSSSBTTTTBCCSSHHHHH
T ss_pred CCCCCcCCCCCCchhCCHHHHH
Confidence 3567899999988877766554
No 190
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=21.92 E-value=35 Score=20.06 Aligned_cols=17 Identities=12% Similarity=0.471 Sum_probs=11.7
Q ss_pred CEEEcccCCCCcCCCCC
Q 034010 8 PFFSCRNCLNPLAFHHD 24 (106)
Q Consensus 8 ~~y~C~~C~thLa~~~~ 24 (106)
.+|.|..|.+.++..+-
T Consensus 2 ~iY~C~rCg~~fs~~el 18 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQL 18 (48)
T ss_dssp ---CCCCTTTTCCCCCS
T ss_pred cEEEeeccCCCccHHHH
Confidence 47999999998887664
No 191
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.74 E-value=9.1 Score=19.54 Aligned_cols=22 Identities=18% Similarity=0.474 Sum_probs=16.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~~~~~C~~C~k~F~~~~~L~ 29 (46)
T 2eoe_A 8 TGEKPYKCNECGKVFTQNSHLA 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCcChhhCCHHHHH
Confidence 4567899999988777665554
No 192
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.69 E-value=9.4 Score=19.48 Aligned_cols=22 Identities=18% Similarity=0.548 Sum_probs=16.1
Q ss_pred CCCCEEEcccCCCCcCCCCCce
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~li 26 (106)
.+.+.|.|..|..-++..+.|.
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~ 29 (46)
T 2eq3_A 8 TGEKPYECNQCGKAFSVRSSLT 29 (46)
T ss_dssp CCCCSSEETTTTEECSSHHHHH
T ss_pred CCCCCeECCCCChhhCCHHHHH
Confidence 4567899999987776665554
No 193
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=21.47 E-value=18 Score=20.58 Aligned_cols=23 Identities=13% Similarity=0.312 Sum_probs=16.6
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+++.|.|..|..-+...+.|..
T Consensus 11 ~~~k~~~C~~C~k~f~~~~~L~~ 33 (77)
T 2ct1_A 11 SGEKPYECYICHARFTQSGTMKM 33 (77)
T ss_dssp SCCCSEECTTTCCEESCHHHHHH
T ss_pred CCCCCeECCCcCchhCCHHHHHH
Confidence 35678999999877776665543
No 194
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=21.47 E-value=15 Score=20.61 Aligned_cols=11 Identities=36% Similarity=0.905 Sum_probs=4.8
Q ss_pred CEEEcccCCCC
Q 034010 8 PFFSCRNCLNP 18 (106)
Q Consensus 8 ~~y~C~~C~th 18 (106)
+.|.|..|..-
T Consensus 48 ~~~~C~~C~~~ 58 (73)
T 1f2i_G 48 KPFQCRICMRN 58 (73)
T ss_dssp CCEECTTTCCE
T ss_pred CCeECCCCCch
Confidence 33444444433
No 195
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=21.32 E-value=34 Score=20.00 Aligned_cols=14 Identities=21% Similarity=0.534 Sum_probs=10.5
Q ss_pred EEEcccCCCCcCCC
Q 034010 9 FFSCRNCLNPLAFH 22 (106)
Q Consensus 9 ~y~C~~C~thLa~~ 22 (106)
-|.|..|+.+|...
T Consensus 27 CF~C~~C~~~L~~~ 40 (76)
T 1iml_A 27 CLKCEKCGKTLTSG 40 (76)
T ss_dssp TCBCTTTCCBCCTT
T ss_pred CCCccccCccCCCC
Confidence 37888888887754
No 196
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=21.28 E-value=5.7 Score=27.42 Aligned_cols=25 Identities=16% Similarity=0.374 Sum_probs=21.2
Q ss_pred ccCCCCEEEcccCCCCcCCCCCcee
Q 034010 3 EFDGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 3 ~l~g~~~y~C~~C~thLa~~~~liS 27 (106)
++.|.+.|.|..|...+++.+.|.+
T Consensus 44 d~tGekpfyC~~C~K~F~~~~~L~~ 68 (124)
T 1zr9_A 44 DLPGGGLHRCLACARYFIDSTNLKT 68 (124)
T ss_dssp SSGGGGCSEETTTTEECSSHHHHHH
T ss_pred cCCCCcceEcccCcchhCCHHHHHH
Confidence 4567889999999999999888764
No 197
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=21.11 E-value=14 Score=20.87 Aligned_cols=23 Identities=17% Similarity=0.524 Sum_probs=17.3
Q ss_pred CCCCEEEcccCCCCcCCCCCcee
Q 034010 5 DGRPFFSCRNCLNPLAFHHDLIS 27 (106)
Q Consensus 5 ~g~~~y~C~~C~thLa~~~~liS 27 (106)
.+.+.|.|..|..-+.....|..
T Consensus 13 ~~~~~~~C~~C~k~f~~~~~l~~ 35 (74)
T 2lce_A 13 HSDKPYKCDRCQASFRYKGNLAS 35 (74)
T ss_dssp CCCCSBCCTTSSCCBSCHHHHHH
T ss_pred CCCCCeECCCCCceeCCHHHHHH
Confidence 45678999999988777666543
No 198
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.66 E-value=40 Score=20.48 Aligned_cols=11 Identities=45% Similarity=1.165 Sum_probs=5.2
Q ss_pred EEcccCCCCcC
Q 034010 10 FSCRNCLNPLA 20 (106)
Q Consensus 10 y~C~~C~thLa 20 (106)
|.|..|+.+|.
T Consensus 52 F~C~~C~~~L~ 62 (90)
T 2dar_A 52 FNCAHCKNTMA 62 (90)
T ss_dssp CBCSSSCCBCS
T ss_pred CccCCCCCCCC
Confidence 44444444444
No 199
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.64 E-value=28 Score=20.01 Aligned_cols=15 Identities=13% Similarity=0.465 Sum_probs=7.4
Q ss_pred cccCCCCcCCCCCce
Q 034010 12 CRNCLNPLAFHHDLI 26 (106)
Q Consensus 12 C~~C~thLa~~~~li 26 (106)
|..|+.++...+.+|
T Consensus 8 C~~C~~~I~~~~~~~ 22 (72)
T 1x4k_A 8 CQECKKTIMPGTRKM 22 (72)
T ss_dssp BSSSCCCCCSSSCEE
T ss_pred CccCCCcccCCceEE
Confidence 555555555444333
No 200
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=20.55 E-value=10 Score=19.40 Aligned_cols=14 Identities=29% Similarity=1.293 Sum_probs=10.4
Q ss_pred eeeeeccCCCc--eee
Q 034010 64 AKIYCSNCGQE--LGW 77 (106)
Q Consensus 64 ~dI~C~~C~~~--lGW 77 (106)
.|.+|-.|..+ +||
T Consensus 4 vdffcetcskpwlvgw 19 (26)
T 1loi_A 4 VDFFCETCSKPWLVGW 19 (26)
T ss_dssp HHHHHHTSSCTTGGGG
T ss_pred HHHHHHhcCCchhhhh
Confidence 46789999875 576
No 201
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=20.52 E-value=11 Score=20.46 Aligned_cols=18 Identities=28% Similarity=0.663 Sum_probs=15.6
Q ss_pred EEEcccCCCCcCCCCCce
Q 034010 9 FFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 9 ~y~C~~C~thLa~~~~li 26 (106)
-|.|.-|...|++.++|+
T Consensus 5 GFiCP~C~~~l~s~~~L~ 22 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELF 22 (34)
T ss_dssp EEECTTTCCEESSHHHHH
T ss_pred ccCCcHHHHHcCCHHHHH
Confidence 499999999999988775
No 202
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.13 E-value=15 Score=22.70 Aligned_cols=20 Identities=20% Similarity=0.481 Sum_probs=11.4
Q ss_pred CCCEEEcccCCCCcCCCCCc
Q 034010 6 GRPFFSCRNCLNPLAFHHDL 25 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~l 25 (106)
|+++|.|..|..-+...+.|
T Consensus 53 ~~k~~~C~~C~k~F~~~~~L 72 (85)
T 2lv2_A 53 AAQVFPCKYCPATFYSSPGL 72 (85)
T ss_dssp CSSSEECTTSSCEESSHHHH
T ss_pred CCCccCCCCCCCEeCCHHHH
Confidence 45667777776655544433
No 203
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=20.08 E-value=78 Score=22.60 Aligned_cols=30 Identities=13% Similarity=0.195 Sum_probs=25.9
Q ss_pred eCCCCcEEEeecccccccCcceeeeeeccc
Q 034010 31 KAQTGQAYMFSNAMNVVLGRKEDKQMITGM 60 (106)
Q Consensus 31 ~G~~G~AyLf~~v~Nv~~g~~e~r~m~TG~ 60 (106)
.|++|.|+.=-.+.|+..|...++..-+|-
T Consensus 57 pGKhG~A~vr~k~knl~TGk~~E~tf~s~~ 86 (167)
T 3hks_A 57 TGKHGHAKCHFVAIDIFTAKKLEDIVPSSH 86 (167)
T ss_dssp SSTTCCCEEEEEEEETTTCCEEEEEEETTS
T ss_pred CCCCCceEEEEEEEEcCCCCEEEEEEcCCC
Confidence 688899999999999999999888777764
No 204
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=20.06 E-value=17 Score=20.46 Aligned_cols=21 Identities=19% Similarity=0.469 Sum_probs=15.3
Q ss_pred CCCEEEcccCCCCcCCCCCce
Q 034010 6 GRPFFSCRNCLNPLAFHHDLI 26 (106)
Q Consensus 6 g~~~y~C~~C~thLa~~~~li 26 (106)
+++.|.|..|...++....|.
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~ 31 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILV 31 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHH
T ss_pred CCCCccCCCCCCccCCHHHHH
Confidence 567899999987766655543
No 205
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.03 E-value=42 Score=19.67 Aligned_cols=10 Identities=40% Similarity=1.155 Sum_probs=4.9
Q ss_pred EEcccCCCCc
Q 034010 10 FSCRNCLNPL 19 (106)
Q Consensus 10 y~C~~C~thL 19 (106)
|.|..|+.+|
T Consensus 42 F~C~~C~~~L 51 (80)
T 2cuq_A 42 LVCTGCQTPL 51 (80)
T ss_dssp CBCSSSCCBC
T ss_pred CCcccCCCcC
Confidence 4445555444
Done!