Query 034015
Match_columns 106
No_of_seqs 101 out of 327
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:52:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pr6_A Trapp-associated protei 100.0 2.2E-32 7.4E-37 193.9 9.7 97 3-104 11-119 (162)
2 2j3w_A Sedlin, trafficking pro 99.9 2.2E-27 7.5E-32 164.7 11.2 93 2-103 6-105 (142)
3 2j3t_C Trafficking protein par 99.8 1.2E-19 4.1E-24 126.2 10.5 92 1-103 2-101 (145)
4 2j3t_D Trafficking protein par 99.7 9.4E-17 3.2E-21 118.4 7.1 87 6-103 85-174 (219)
5 3cue_C Transport protein parti 99.7 2.2E-16 7.6E-21 111.3 7.7 93 1-103 2-107 (159)
6 3cue_A Transport protein parti 98.7 2.3E-07 7.7E-12 68.3 11.0 42 62-103 121-183 (219)
7 2vgl_S AP-2 complex subunit si 31.8 1E+02 0.0035 19.8 10.5 73 1-87 1-73 (142)
8 2jni_A Arenicin-2; peptide, an 27.6 48 0.0016 15.7 2.1 12 68-79 2-13 (26)
9 2vgl_M AP-2 complex subunit MU 26.3 2.2E+02 0.0074 21.8 9.3 70 1-87 1-71 (435)
10 3tjz_C Coatomer subunit zeta-1 20.6 1.1E+02 0.0037 20.3 3.7 70 1-87 12-83 (153)
No 1
>3pr6_A Trapp-associated protein TCA17; longin fold, vesicle tethering regulation, trapp complex, TR network, transport protein; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-32 Score=193.92 Aligned_cols=97 Identities=20% Similarity=0.330 Sum_probs=84.0
Q ss_pred EEEEEEcCCCCeeEEEcCCCc----hhHHHHHHHHHhhhhhhhhhc--cCCCCCCCCCcccccccceeecCeEEEEEE-e
Q 034015 3 ACVAVVGHQNNPLYIQSFTEA----DDALKLHHIVHCSLDVVDERV--NNPKKSGPTLNETFLGLLYPTENYKVYGYL-T 75 (106)
Q Consensus 3 ~~~aIIg~~d~PLy~~~~~~~----~~~l~~~fi~h~SLDiiee~~--~~~~~~~~~~~~~yLg~l~~~~~~~vygyv-T 75 (106)
.|+||||++|+|||++.+++. +++|++||++|+|||+|||++ |.+ ++ .++|||+|+++++++||||+ |
T Consensus 11 ~FVaIIg~~n~PLyI~~~~~~~~~~~~~Lk~~fi~hsSLDi~Ee~~~~~~s----~~-~~~~LglL~~~e~~~VYGy~iT 85 (162)
T 3pr6_A 11 CFVSLIDESDKPILIYVPNEAENEMNDVLKYNVLSNISLDYFESALVEWHS----LD-SKPLLKSIFQLEGVSVFAMLIK 85 (162)
T ss_dssp SEEEEECTTSCEEEEECCC-------CHHHHHHHHHHHHHHHHCTTCCCCC----SS-SSCCCEEEEEETTEEEEEEECT
T ss_pred eEEEEECCCCceeEEEeCCCccccccchhHHHHHHHHHHHHHhhhhhhccc----cc-cccccceEeecCCeEEEEEEEc
Confidence 589999999999999999875 357999999999999999999 532 22 35799999999999999997 9
Q ss_pred cCCeEEEEEEcCC---CCCc--hhHHHHhhhccc
Q 034015 76 NTKVKFILVTTDL---DVRD--ADVRNVSVTISF 104 (106)
Q Consensus 76 ~t~~Kfil~~~~~---~~~d--~~Ik~ff~~i~~ 104 (106)
|||+|||++++++ ..+| ++||+||+++|-
T Consensus 86 nt~vKfVl~~d~~~~~~~~D~~~~Ik~~F~~vh~ 119 (162)
T 3pr6_A 86 QTGLKIVIGFEQKSLSGADDEFEAINQIFETVRK 119 (162)
T ss_dssp TTCCEEEEEEEGGGCCCCHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEEccCCcccccchHHHHHHHHHHHHH
Confidence 9999999999874 4788 899999999973
No 2
>2j3w_A Sedlin, trafficking protein particle complex protein 2; multisubunit tethering factor, trapp, palmitate, transport, lipoprotein; HET: PLM; 2.1A {Mus musculus} SCOP: d.110.4.3 PDB: 1h3q_A
Probab=99.95 E-value=2.2e-27 Score=164.68 Aligned_cols=93 Identities=23% Similarity=0.408 Sum_probs=85.2
Q ss_pred EEEEEEEcCCCCeeEEEcCCCc-------hhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEEEE
Q 034015 2 IACVAVVGHQNNPLYIQSFTEA-------DDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYL 74 (106)
Q Consensus 2 i~~~aIIg~~d~PLy~~~~~~~-------~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vygyv 74 (106)
++|++|||++|+|||++++++. +..+.+||++|+|||++|++.|.+ +++|||.+++++++++|||+
T Consensus 6 i~~~~Ii~~~~~ply~~~~~~~~~~~~~~~~~l~~~~i~hs~ldiv~~~~~~~-------~~~~l~~~~~~~~y~v~~~~ 78 (142)
T 2j3w_A 6 SFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLS-------NNMYLKTVDKFNEWFVSAFV 78 (142)
T ss_dssp CEEEEEECTTSCEEEEEEECCSCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGC-------SCSEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEecCCcCcCCccHHHHHHHHHHHHHHHHHHHHhcCCC-------CcceeEeeecccceEEEEEE
Confidence 4899999999999999999874 345778899999999999999964 68999999999999999999
Q ss_pred ecCCeEEEEEEcCCCCCchhHHHHhhhcc
Q 034015 75 TNTKVKFILVTTDLDVRDADVRNVSVTIS 103 (106)
Q Consensus 75 T~t~~Kfil~~~~~~~~d~~Ik~ff~~i~ 103 (106)
|+||+|||++++.+ ++++||++|++|+
T Consensus 79 T~tg~Kfvl~~d~~--~~~~i~~~~~~iy 105 (142)
T 2j3w_A 79 TAGHMRFIMLHDVR--QEDGIKNFFTDVY 105 (142)
T ss_dssp CTTCCEEEEEESSC--CHHHHHHHHHHHH
T ss_pred cCCCcEEEEEeCCC--CcHHHHHHHHHHH
Confidence 99999999999875 7999999999987
No 3
>2j3t_C Trafficking protein particle complex subunit 1, trafficking protein particle complex subunit 3; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Mus musculus}
Probab=99.81 E-value=1.2e-19 Score=126.25 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=76.5
Q ss_pred CEEEEEEEcCCCCeeEEEcCCCc-------hh-HHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEE
Q 034015 1 MIACVAVVGHQNNPLYIQSFTEA-------DD-ALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYG 72 (106)
Q Consensus 1 mi~~~aIIg~~d~PLy~~~~~~~-------~~-~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vyg 72 (106)
|+.|++|||++|+|||.++++.. ++ ....++++|+.+|++++..|.+ +..++..+ ++++|++||
T Consensus 2 ~i~~~~Ii~k~g~~iy~~~~~~~~~~~~~~~~~~~ll~g~~~Sl~~i~~klsp~~-------~~~~~~~~-~t~~ykl~~ 73 (145)
T 2j3t_C 2 TVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLD-------MKDGFLSF-QTSRYKLHY 73 (145)
T ss_dssp CEEEEEEECTTSCEEEEEESSCSSCCSSCHHHHHHHHHHHHHHHHHHHHHHCSSC-------CSSCEEEE-ECSSCEEEE
T ss_pred eEEEEEEEeCCCCEEEeeeecCCCcCCCCcchHHHHHHHHHHHHHHHHHHhCCCC-------CCCceEEE-ecCCEEEEE
Confidence 58999999999999999999652 23 3446788888888888887754 34467666 899999999
Q ss_pred EEecCCeEEEEEEcCCCCCchhHHHHhhhcc
Q 034015 73 YLTNTKVKFILVTTDLDVRDADVRNVSVTIS 103 (106)
Q Consensus 73 yvT~t~~Kfil~~~~~~~~d~~Ik~ff~~i~ 103 (106)
|+|+||+|||++++. ++++||+||++|+
T Consensus 74 ~~T~TgiKFvl~td~---~~~~i~~~l~~iy 101 (145)
T 2j3t_C 74 YETPTGIKVVMNTDL---GVGPIRDVLHHIY 101 (145)
T ss_dssp EECTTSCEEEEEECT---TCCCCHHHHHHHH
T ss_pred EEcCCCCEEEEEecC---CcchHHHHHHHHH
Confidence 999999999999975 5778999999987
No 4
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=99.67 E-value=9.4e-17 Score=118.42 Aligned_cols=87 Identities=21% Similarity=0.299 Sum_probs=70.6
Q ss_pred EEEcCCCCeeEEEcCCCc---hhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEEEEecCCeEEE
Q 034015 6 AVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFI 82 (106)
Q Consensus 6 aIIg~~d~PLy~~~~~~~---~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vygyvT~t~~Kfi 82 (106)
.|+|++|+|||++.+.+. ++.+.+..++| |||.|++++|...+ ...+ ....+++|++|||+|+||+|||
T Consensus 85 ~iigk~N~PLyir~f~~~l~sn~~L~lag~lh-SLd~i~~klsp~~~------s~g~-~~~~T~~ykl~~y~T~TgiKFV 156 (219)
T 2j3t_D 85 YLGNPANYPVSIRFGRPRLTSNEKLMLASMFH-SLFAIGSQLSPEQG------SSGI-EMLETDTFKLHCYQTLTGIKFV 156 (219)
T ss_dssp HTTCGGGCSEEEEEECCCCCHHHHHHHHHHHH-HHHHHHHHTCSSSS------CCSC-SEEEESSCEEEEEECTTSCEEE
T ss_pred eeecCCCCceEEEecCCCCChhHHHHHHHHHH-HHHHHHHHhCCCCC------CCCe-eEEecCceEEEEEEcCCCCEEE
Confidence 478999999999999875 33455566999 99999999986421 1223 3447899999999999999999
Q ss_pred EEEcCCCCCchhHHHHhhhcc
Q 034015 83 LVTTDLDVRDADVRNVSVTIS 103 (106)
Q Consensus 83 l~~~~~~~~d~~Ik~ff~~i~ 103 (106)
++++. +++++|++|++|+
T Consensus 157 Lltd~---~~~~ir~~l~~Iy 174 (219)
T 2j3t_D 157 VLADP---RQAGIDSLLRKIY 174 (219)
T ss_dssp EEECT---TCCCHHHHHHHHH
T ss_pred EEecC---CchHHHHHHHHHH
Confidence 99975 6889999999987
No 5
>3cue_C Transport protein particle 18 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.2e-16 Score=111.29 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=68.2
Q ss_pred CEEEEEEEcCCCCeeEEEcCCC-------------chhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecC
Q 034015 1 MIACVAVVGHQNNPLYIQSFTE-------------ADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTEN 67 (106)
Q Consensus 1 mi~~~aIIg~~d~PLy~~~~~~-------------~~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~ 67 (106)
|++|+.|||++++|||.+++.. .+++.++.+-++.||+.+.+++.... ..+.| .+.++++
T Consensus 2 ~i~~~~Ii~r~g~~iy~~~~~~~~~~~~~~~~~~~~~~~~~ll~g~~~SL~~i~~kls~~~-----~~~~f--~~~~T~~ 74 (159)
T 3cue_C 2 GIYSFWIFDRHCNCIFDREWTLASNSASGTINSKQNEEDAKLLYGMIFSLRSITQKLSKGS-----VKNDI--RSISTGK 74 (159)
T ss_dssp CCCEEEEECSSSCEEECCCC-------------CCHHHHHHHHHHHHHHHHHHHHHSCCSS-----SCCCE--EEEECSS
T ss_pred eEEEEEEEcCCCceEEeeeeccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhCCCC-----CCCCe--EEEeeCC
Confidence 4789999999999999999853 13445545444445555555543221 12445 5677899
Q ss_pred eEEEEEEecCCeEEEEEEcCCCCCchhHHHHhhhcc
Q 034015 68 YKVYGYLTNTKVKFILVTTDLDVRDADVRNVSVTIS 103 (106)
Q Consensus 68 ~~vygyvT~t~~Kfil~~~~~~~~d~~Ik~ff~~i~ 103 (106)
|++|||+|+||+|||++++. +++++|++|++|+
T Consensus 75 ykl~~~eT~TgiKFvl~td~---~~~~i~~~l~~iy 107 (159)
T 3cue_C 75 YRVHTYCTASGLWFVLLSDF---KQQSYTQVLQYIY 107 (159)
T ss_dssp CBEEEECCSSCCEEEEECCS---SSSCTHHHHHHHH
T ss_pred EEEEEEEeCCCCEEEEEeCC---CcchHHHHHHHHH
Confidence 99999999999999999975 5889999999987
No 6
>3cue_A Transport protein particle 23 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=98.69 E-value=2.3e-07 Score=68.29 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=35.2
Q ss_pred ceeecCeEEEEEEecCCeEEEEEEcCCC---------------------CCchhHHHHhhhcc
Q 034015 62 LYPTENYKVYGYLTNTKVKFILVTTDLD---------------------VRDADVRNVSVTIS 103 (106)
Q Consensus 62 l~~~~~~~vygyvT~t~~Kfil~~~~~~---------------------~~d~~Ik~ff~~i~ 103 (106)
+...++|++|||+|+||+||||+++... ++|++||+||++|+
T Consensus 121 ~~~Td~y~l~~f~T~TGiKFVlltd~~~~~~~~s~~~~~~~~~~~~~s~l~e~~ir~ff~~VY 183 (219)
T 3cue_A 121 QLCTDQFTMFIYQTLTGLKFVAISSSVMPQRQPTIATTDKPDRPKSTSNLAIQIADNFLRKVY 183 (219)
T ss_dssp EEEESSCEEEEEECTTSCEEEEEESSCC--------------------CHHHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEEcCCCCEEEEEecCCCcccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3457899999999999999999998642 22489999999986
No 7
>2vgl_S AP-2 complex subunit sigma-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Mus musculus} SCOP: i.23.1.1 PDB: 2jkt_I 2jkr_I* 2xa7_S
Probab=31.80 E-value=1e+02 Score=19.76 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=42.0
Q ss_pred CEEEEEEEcCCCCeeEEEcCCCchhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEEEEecCCeE
Q 034015 1 MIACVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVK 80 (106)
Q Consensus 1 mi~~~aIIg~~d~PLy~~~~~~~~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vygyvT~t~~K 80 (106)
|+.++.|++++++|+..+.+.+.....+.. ..+.+-....+. +.. ..++ ...++ ..+-|+...++=
T Consensus 1 MI~~i~i~~~~Gk~~l~k~y~~~~~~~~~~-----~~~~f~~~v~~~-~~~---~~~~----~~~~~-~~~vy~~~~~Ly 66 (142)
T 2vgl_S 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQK-----LIEEVHAVVTVR-DAK---HTNF----VEFRN-FKIIYRRYAGLY 66 (142)
T ss_dssp CEEEEEEEETTSCEEEEEECSCCCHHHHHH-----HHHHHHHHHHTC-CTT---SCSE----EEETT-EEEEEEEETTEE
T ss_pred CeEEEEEEcCCCCEEEEEeCCCCChhhhHH-----HHHHHHHHHhcC-CCC---CCCE----EEECC-EEEEEEEECCEE
Confidence 999999999999999999997432211111 122222333211 100 1112 22334 345678888898
Q ss_pred EEEEEcC
Q 034015 81 FILVTTD 87 (106)
Q Consensus 81 fil~~~~ 87 (106)
|+++.+.
T Consensus 67 fv~~~~~ 73 (142)
T 2vgl_S 67 FCICVDV 73 (142)
T ss_dssp EEEEECT
T ss_pred EEEEeCC
Confidence 8888864
No 8
>2jni_A Arenicin-2; peptide, antimicrobial, beta-sheet, antimicrobial protein; NMR {Arenicola marina} PDB: 2l8x_A 2jsb_A
Probab=27.60 E-value=48 Score=15.66 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=9.4
Q ss_pred eEEEEEEecCCe
Q 034015 68 YKVYGYLTNTKV 79 (106)
Q Consensus 68 ~~vygyvT~t~~ 79 (106)
+.|||||-..|+
T Consensus 2 wcvyayvrirgv 13 (26)
T 2jni_A 2 WCVYAYVRIRGV 13 (26)
T ss_dssp CEEEEEEEETTE
T ss_pred eEEEEEEEEEEE
Confidence 679999976664
No 9
>2vgl_M AP-2 complex subunit MU-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2jkr_M 2jkt_M 2bp5_M* 2xa7_M
Probab=26.35 E-value=2.2e+02 Score=21.76 Aligned_cols=70 Identities=11% Similarity=0.190 Sum_probs=44.5
Q ss_pred CEEEEEEEcCCCCeeEEEcCCCc-hhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEEEEecCCe
Q 034015 1 MIACVAVVGHQNNPLYIQSFTEA-DDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKV 79 (106)
Q Consensus 1 mi~~~aIIg~~d~PLy~~~~~~~-~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vygyvT~t~~ 79 (106)
||.++-|+++++++++.+.+... ... .++.+...+...... -...+...++ ..+-|+...++
T Consensus 1 MI~~i~I~~~~Gk~~l~k~y~~~~~~~---------~~~~f~~~v~~~~~~-------~~~~ii~~~~-~~~vy~~~~~L 63 (435)
T 2vgl_M 1 MIGGLFIYNHKGEVLISRVYRDDIGRN---------AVDAFRVNVIHARQQ-------VRSPVTNIAR-TSFFHVKRSNI 63 (435)
T ss_dssp CCCEEEEECTTCCEEEEEECSSSCCHH---------HHHHHHHHTTTCSSC-------CCCSEEEETT-EEEEEEEETTE
T ss_pred CeEEEEEECCCCCEEEEEecCCCCChh---------HHHHHHHHHhccccC-------CCCCEEEECC-EEEEEEEECCE
Confidence 89999999999999999999753 211 134455554432110 0112223344 35667888899
Q ss_pred EEEEEEcC
Q 034015 80 KFILVTTD 87 (106)
Q Consensus 80 Kfil~~~~ 87 (106)
=|+++.+.
T Consensus 64 yfv~~~~~ 71 (435)
T 2vgl_M 64 WLAAVTKQ 71 (435)
T ss_dssp EEEEEESS
T ss_pred EEEEEecC
Confidence 88888864
No 10
>3tjz_C Coatomer subunit zeta-1; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus} PDB: 2hf6_A
Probab=20.65 E-value=1.1e+02 Score=20.25 Aligned_cols=70 Identities=6% Similarity=0.216 Sum_probs=41.0
Q ss_pred CEEEEEEEcCCCCeeEEEcCCCc--hhHHHHHHHHHhhhhhhhhhccCCCCCCCCCcccccccceeecCeEEEEEEecCC
Q 034015 1 MIACVAVVGHQNNPLYIQSFTEA--DDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTK 78 (106)
Q Consensus 1 mi~~~aIIg~~d~PLy~~~~~~~--~~~l~~~fi~h~SLDiiee~~~~~~~~~~~~~~~yLg~l~~~~~~~vygyvT~t~ 78 (106)
|+.++-|++++++|++.+-+.+. ...-+..+.. +++... ..+ + ..+...+++ .+-|....+
T Consensus 12 mI~~ililn~~Gk~~lsK~Y~~~~~~~~~~~~~e~----~i~~~~-~r~--------~---~~i~~~~~~-~~vy~~~~~ 74 (153)
T 3tjz_C 12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEK----NIFNKT-HRT--------D---SEIALLEGL-TVVYKSSID 74 (153)
T ss_dssp CEEEEEEECTTSCEEEEEECSSSSCSHHHHHHHHH----HHHHHH-SSC--------C---CCEEEETTE-EEEEEECSS
T ss_pred HheEEEEECCCCCEEEEEeCCCCCCCHHHHHHHHH----HHHHHH-hCC--------C---CCEEEECCE-EEEEEEECC
Confidence 89999999999999999998752 1111111110 111111 111 1 112223443 467888889
Q ss_pred eEEEEEEcC
Q 034015 79 VKFILVTTD 87 (106)
Q Consensus 79 ~Kfil~~~~ 87 (106)
+=|+++.+.
T Consensus 75 Lyfv~~~~~ 83 (153)
T 3tjz_C 75 LYFYVIGSS 83 (153)
T ss_dssp CEEEEEEET
T ss_pred EEEEEEEcC
Confidence 999999875
Done!