BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034020
(106 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1I1J7|RS17_DESAP 30S ribosomal protein S17 OS=Desulforudis audaxviator (strain
MP104C) GN=rpsQ PE=3 SV=1
Length = 85
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 61/75 (81%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G VVS+KM K+VVVAVD L H +Y R V+RT KFMAHDE+NQC IGD+V++ +RPLS+
Sbjct: 11 GRVVSDKMDKTVVVAVDTLVKHPLYGRTVRRTRKFMAHDEDNQCRIGDKVKIAETRPLSR 70
Query: 66 HKHWAVAEILKKARI 80
HK W VAE+L++++I
Sbjct: 71 HKRWRVAEVLERSQI 85
>sp|Q7U4J1|RS17_SYNPX 30S ribosomal protein S17 OS=Synechococcus sp. (strain WH8102)
GN=rpsQ PE=3 SV=1
Length = 103
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVESRFPHPIYQKTVSRTTRYKAHDEDNSCRVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEILKKARIYVPPSADNAAAA 92
RP+S+HK WA+AE+L + P AD +A +
Sbjct: 63 RPMSRHKRWAIAEVLSHS-----PKADKSAGS 89
>sp|Q0ID14|RS17_SYNS3 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9311)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VG VVS+KM K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 LKERVGTVVSDKMDKTVVVAVENRFPHPIYQKTVSRTTRYKAHDEDNACRVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEILKKA 78
RPLS+HK WA+AE+L ++
Sbjct: 63 RPLSRHKRWAIAEVLSQS 80
>sp|A7HM43|RS17_FERNB 30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain
ATCC 35602 / DSM 5306 / Rt17-B1) GN=rpsQ PE=3 SV=1
Length = 100
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 60/88 (68%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K +VG+VVS+KM K+V V V+RL H + +YVKRT KF AHDENN C +GD V ++ SR
Sbjct: 4 KRLVGVVVSDKMDKTVTVKVERLVKHAKFGKYVKRTKKFYAHDENNACRVGDVVEIEESR 63
Query: 62 PLSKHKHWAVAEILKKARIYVPPSADNA 89
PLSK K W V IL+++++ P +
Sbjct: 64 PLSKLKRWVVVNILERSKLSETPEIEET 91
>sp|A4XLS1|RS17_CALS8 30S ribosomal protein S17 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rpsQ PE=3 SV=1
Length = 86
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 61/78 (78%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ +G+VVS+KM K+VVVAV+ L H +Y + +KRT+KF AHDENN+C +GD+V + +R
Sbjct: 9 KTRIGVVVSDKMDKTVVVAVETLVQHPLYKKTIKRTTKFKAHDENNECRVGDKVLIMETR 68
Query: 62 PLSKHKHWAVAEILKKAR 79
PLSK K W V +IL++A+
Sbjct: 69 PLSKEKRWRVVQILERAK 86
>sp|A5GIT6|RS17_SYNPW 30S ribosomal protein S17 OS=Synechococcus sp. (strain WH7803)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VG VVS+KM K+VVVAV+ F H +Y + V RT+++ AHDENN +GDRVR+ +
Sbjct: 3 LKERVGTVVSDKMDKTVVVAVENRFPHPIYQKTVSRTTRYKAHDENNSVRVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEIL 75
RPLS+HK WAVAE+L
Sbjct: 63 RPLSRHKRWAVAEVL 77
>sp|A5D5G4|RS17_PELTS 30S ribosomal protein S17 OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=rpsQ PE=3 SV=1
Length = 87
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K++ G VVSNKM K+VVVAV+ L H +Y R ++RT KF AHDE N C IGD+V++ +R
Sbjct: 8 KTLTGRVVSNKMDKTVVVAVETLVRHPLYQRTIRRTKKFKAHDEENACRIGDKVKMMETR 67
Query: 62 PLSKHKHWAVAEILKKAR 79
PLSK K W V EIL++ +
Sbjct: 68 PLSKEKRWRVVEILERTK 85
>sp|A8ZV66|RS17_DESOH 30S ribosomal protein S17 OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=rpsQ PE=3 SV=1
Length = 85
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 57/73 (78%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G VVS+KM K+V+VAV+RL H+ Y +YV+RT+KF AHDE NQC +GD+V + SRPLS+
Sbjct: 12 GTVVSDKMDKTVIVAVERLVKHQEYKKYVRRTAKFAAHDEQNQCAVGDKVIITESRPLSR 71
Query: 66 HKHWAVAEILKKA 78
KHW V +++KA
Sbjct: 72 TKHWRVVNVVEKA 84
>sp|B9MKH2|RS17_CALBD 30S ribosomal protein S17 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rpsQ PE=3 SV=1
Length = 86
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 61/78 (78%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ VG+VVS+KM K+VVVAV+R H +Y + +KRT+KF AHDENN+C +GD+V + +R
Sbjct: 9 KTRVGVVVSDKMDKTVVVAVERHVQHPLYKKTIKRTTKFKAHDENNECRVGDKVLIMETR 68
Query: 62 PLSKHKHWAVAEILKKAR 79
PLSK K W V +IL++A+
Sbjct: 69 PLSKEKRWRVVQILERAK 86
>sp|Q6LVA7|RS17_PHOPR 30S ribosomal protein S17 OS=Photobacterium profundum GN=rpsQ
PE=3 SV=1
Length = 84
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
+G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENN+CN+GD V + RPLS
Sbjct: 9 LGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAHDENNECNLGDTVEVRECRPLS 68
Query: 65 KHKHWAVAEILKKARI 80
K K W + I++KAR+
Sbjct: 69 KTKSWTLVRIVEKARV 84
>sp|Q3AW84|RS17_SYNS9 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9902)
GN=rpsQ PE=3 SV=1
Length = 95
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVETRFPHPIYQKTVSRTTRYKAHDEDNSCRVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEIL 75
RP+S+ K WA+AE+L
Sbjct: 63 RPMSRQKRWAIAEVL 77
>sp|Q605C1|RS17_METCA 30S ribosomal protein S17 OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=rpsQ PE=3 SV=1
Length = 86
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 60/78 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++SV G VVSNKM +++VVA++R H +Y +Y++RT+K +AHDENN+C+IGD V L S
Sbjct: 8 VRSVTGRVVSNKMDRTIVVAIERQVSHPLYGKYIRRTTKVLAHDENNECSIGDLVTLHAS 67
Query: 61 RPLSKHKHWAVAEILKKA 78
RP+SK K W + I+++A
Sbjct: 68 RPISKKKAWTLGAIVERA 85
>sp|A5GVW9|RS17_SYNR3 30S ribosomal protein S17 OS=Synechococcus sp. (strain RCC307)
GN=rpsQ PE=3 SV=1
Length = 83
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 58/75 (77%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VG VVS+KM+K+VVVAV+ F H +Y + V RT+++ HDE+N+C +GDRVR+ +
Sbjct: 3 VKERVGTVVSDKMEKTVVVAVENRFPHPIYKKTVSRTTRYKVHDEDNRCQVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEIL 75
RPLS+ K WAVAEI+
Sbjct: 63 RPLSRSKRWAVAEIM 77
>sp|Q3AMN9|RS17_SYNSC 30S ribosomal protein S17 OS=Synechococcus sp. (strain CC9605)
GN=rpsQ PE=3 SV=1
Length = 98
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 58/75 (77%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K +G VVS+KM+K+VVVAV+ F H +Y + V RT+++ AHDE+N C +GDRVR+ +
Sbjct: 3 VKERIGTVVSDKMEKTVVVAVESRFPHPIYQKTVSRTTRYKAHDEDNTCRVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEIL 75
RP+S+ K WA+AE+L
Sbjct: 63 RPMSRQKRWAIAEVL 77
>sp|Q67JV2|RS17_SYMTH 30S ribosomal protein S17 OS=Symbiobacterium thermophilum (strain
T / IAM 14863) GN=rpsQ PE=3 SV=1
Length = 94
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ VG+V S+KM K+VVVAV+ L H +Y + V+RT KF AHDE+NQC +GD+VR+ +R
Sbjct: 9 KTRVGVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDEHNQCKVGDKVRIMETR 68
Query: 62 PLSKHKHWAVAEILKKARIY 81
PLSK K W V EI++ A Y
Sbjct: 69 PLSKEKRWRVVEIIESAPDY 88
>sp|Q8R7W3|RS17_THETN 30S ribosomal protein S17 OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 56/74 (75%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
+G VVSNKMQK++VVAV+ F H +Y + VKRT K+ HDENN CN+GD V++ +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDKFRHPLYGKIVKRTKKYKVHDENNICNVGDVVKIMETRPLS 69
Query: 65 KHKHWAVAEILKKA 78
K K W + E++KKA
Sbjct: 70 KEKRWRLVEVIKKA 83
>sp|Q7MPH9|RS17_VIBVY 30S ribosomal protein S17 OS=Vibrio vulnificus (strain YJ016)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V +
Sbjct: 5 IRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKARI 80
RPLSK K W + ++++KA+I
Sbjct: 65 RPLSKTKSWTLVKVVEKAKI 84
>sp|Q8DE48|RS17_VIBVU 30S ribosomal protein S17 OS=Vibrio vulnificus (strain CMCP6)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V +
Sbjct: 5 IRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKARI 80
RPLSK K W + ++++KA+I
Sbjct: 65 RPLSKTKSWTLVKVVEKAKI 84
>sp|A7N0I6|RS17_VIBHB 30S ribosomal protein S17 OS=Vibrio harveyi (strain ATCC BAA-1116
/ BB120) GN=rpsQ PE=3 SV=1
Length = 84
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 57/75 (76%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C +GD V + RPLSK
Sbjct: 10 GRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGLGDTVEIAECRPLSK 69
Query: 66 HKHWAVAEILKKARI 80
K W + ++L+KA+I
Sbjct: 70 TKSWTLVKVLEKAKI 84
>sp|B1LBN1|RS17_THESQ 30S ribosomal protein S17 OS=Thermotoga sp. (strain RQ2) GN=rpsQ
PE=3 SV=1
Length = 107
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHTIYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 62 PLSKHKHWAVAEILKK 77
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|A5IM92|RS17_THEP1 30S ribosomal protein S17 OS=Thermotoga petrophila (strain RKU-1
/ ATCC BAA-488 / DSM 13995) GN=rpsQ PE=3 SV=1
Length = 107
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPIYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 62 PLSKHKHWAVAEILKK 77
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|C3LRP9|RS17_VIBCM 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V +
Sbjct: 5 IRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKARI 80
RPLSK K W + +I++KA++
Sbjct: 65 RPLSKTKSWTLVKIVEKAKM 84
>sp|Q9KNZ3|RS17_VIBCH 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V +
Sbjct: 5 IRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKARI 80
RPLSK K W + +I++KA++
Sbjct: 65 RPLSKTKSWTLVKIVEKAKM 84
>sp|A5F557|RS17_VIBC3 30S ribosomal protein S17 OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V +
Sbjct: 5 IRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKARI 80
RPLSK K W + +I++KA++
Sbjct: 65 RPLSKTKSWTLVKIVEKAKM 84
>sp|P38519|RS17_THEMA 30S ribosomal protein S17 OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=rpsQ PE=3 SV=2
Length = 107
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +R
Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDERNECKIGDVVEIEETR 63
Query: 62 PLSKHKHWAVAEILKK 77
PLSK K W V I+++
Sbjct: 64 PLSKTKRWRVVRIIQR 79
>sp|Q1LTC9|RS17_BAUCH 30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=rpsQ PE=3 SV=1
Length = 89
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G VVSNKM KS+VVA++R+ H +Y +Y+KRT+K AHDENN CNIGD + + RP+SK
Sbjct: 15 GRVVSNKMDKSIVVAIERIIKHPIYGKYIKRTTKIHAHDENNACNIGDLIEIKECRPISK 74
Query: 66 HKHWAVAEILKKA 78
K W + I++KA
Sbjct: 75 TKSWILIRIIEKA 87
>sp|Q5E8A6|RS17_VIBF1 30S ribosomal protein S17 OS=Vibrio fischeri (strain ATCC 700601
/ ES114) GN=rpsQ PE=3 SV=1
Length = 84
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G V+S+KM KS+VVA++R+ H +Y +Y+KRT+K AHDENN+C +GD V +
Sbjct: 5 IRTMQGRVISDKMDKSIVVAIERMVKHPIYGKYIKRTTKLHAHDENNECGLGDTVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKAR 79
RPLSK K W + I++KA+
Sbjct: 65 RPLSKTKSWTLVNIVEKAK 83
>sp|A6TEW3|RS17_KLEP7 30S ribosomal protein S17 OS=Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578) GN=rpsQ
PE=3 SV=1
Length = 84
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 59/78 (75%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G VVS+KM+KS+VVA++R+ H VY +++KRT+K HDENN+C IGD+V +
Sbjct: 5 IRTLQGRVVSDKMEKSIVVAIERMVKHPVYGKFIKRTTKLHVHDENNECGIGDKVEIREC 64
Query: 61 RPLSKHKHWAVAEILKKA 78
RPLSK K W + +++KA
Sbjct: 65 RPLSKTKSWTLVRVVEKA 82
>sp|A1TYK6|RS17_MARAV 30S ribosomal protein S17 OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=rpsQ PE=3 SV=1
Length = 88
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 58/77 (75%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
+++ G VVSNKM KS+VV V+R H +Y +Y+KR++K AHDE+NQCNIGD V + +R
Sbjct: 9 RTLSGKVVSNKMDKSIVVLVERQVKHPLYGKYMKRSTKIHAHDESNQCNIGDTVTIQETR 68
Query: 62 PLSKHKHWAVAEILKKA 78
P+SK K WA+ E+ ++A
Sbjct: 69 PVSKTKSWALVEVTERA 85
>sp|B0K5Q2|RS17_THEPX 30S ribosomal protein S17 OS=Thermoanaerobacter sp. (strain X514)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
+G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLS 69
Query: 65 KHKHWAVAEILKKA 78
K K W + EI+K+A
Sbjct: 70 KEKRWRLVEIVKRA 83
>sp|B0KCK9|RS17_THEP3 30S ribosomal protein S17 OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=rpsQ PE=3 SV=1
Length = 84
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
+G VVSNKMQK++VVAV+ H +Y + +KRT KF HDENN CN+GD V++ +RPLS
Sbjct: 10 IGTVVSNKMQKTIVVAVEDRVRHPLYGKTIKRTKKFKVHDENNVCNVGDIVKIMETRPLS 69
Query: 65 KHKHWAVAEILKKA 78
K K W + EI+K+A
Sbjct: 70 KEKRWRLVEIVKRA 83
>sp|Q089P5|RS17_SHEFN 30S ribosomal protein S17 OS=Shewanella frigidimarina (strain
NCIMB 400) GN=rpsQ PE=3 SV=1
Length = 82
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
+++ G V+SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + R
Sbjct: 6 RTLQGKVISNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDFVAISQCR 65
Query: 62 PLSKHKHWAVAEILKKA 78
PLSK K W +AE++ KA
Sbjct: 66 PLSKTKSWTLAEVVTKA 82
>sp|A7NR54|RS17_ROSCS 30S ribosomal protein S17 OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=rpsQ PE=3 SV=1
Length = 86
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
VG VVSNKMQK+VVVAVD L H +Y + V+RTSKF AHDE QC IGD VR+ +RPLS
Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIVRRTSKFHAHDE-QQCQIGDVVRIGETRPLS 69
Query: 65 KHKHWAVAEILKK 77
K K W V EI+K+
Sbjct: 70 KTKRWEVVEIIKR 82
>sp|A8F4S0|RS17_THELT 30S ribosomal protein S17 OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=rpsQ PE=3 SV=1
Length = 95
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K + G+VVSNKM K+VVV V R H VY +Y++R+ K+ AHDE N+C GD V ++ +R
Sbjct: 4 KRLTGVVVSNKMDKTVVVEVTRKLEHPVYKKYIQRSKKYYAHDEKNECKAGDTVLIEETR 63
Query: 62 PLSKHKHWAVAEILKKARI 80
PLSK K W V E+LK+ I
Sbjct: 64 PLSKMKRWRVVEVLKREVI 82
>sp|A0LIJ9|RS17_SYNFM 30S ribosomal protein S17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rpsQ PE=3 SV=1
Length = 87
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 58/79 (73%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ VG V+SNKM K+VVV V+RL HH Y+++++R +KF AHD N C +GDRV ++ SR
Sbjct: 9 KTRVGRVLSNKMDKTVVVVVERLIHHPQYHKFIRRQNKFKAHDAQNACRVGDRVIIEESR 68
Query: 62 PLSKHKHWAVAEILKKARI 80
P+SK K W V ++L KA I
Sbjct: 69 PISKDKRWVVVQVLDKAVI 87
>sp|B9M6G9|RS17_GEOSF 30S ribosomal protein S17 OS=Geobacter sp. (strain FRC-32)
GN=rpsQ PE=3 SV=1
Length = 85
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ +G+VVS+KM K+VVV VDRL H VYN+Y+KR++K+ AHD +N C GDRV + +R
Sbjct: 8 KTQIGVVVSDKMDKTVVVKVDRLIKHSVYNKYIKRSAKYKAHDVDNSCKTGDRVLIVETR 67
Query: 62 PLSKHKHWAVAEILKK 77
P+SK K W V +I+++
Sbjct: 68 PMSKDKRWKVRQIIER 83
>sp|B9K895|RS17_THENN 30S ribosomal protein S17 OS=Thermotoga neapolitana (strain ATCC
49049 / DSM 4359 / NS-E) GN=rpsQ PE=3 SV=1
Length = 112
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 58/76 (76%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K ++G+VVS+KM K+VVVAV+R H +Y +Y+KRT K+ AHDE N+C +GD V ++ +R
Sbjct: 4 KRMIGVVVSDKMDKTVVVAVERHVQHPLYKKYIKRTKKYHAHDEKNECRVGDVVEIEETR 63
Query: 62 PLSKHKHWAVAEILKK 77
PLSK K W V +I+K+
Sbjct: 64 PLSKTKRWRVVKIIKR 79
>sp|A5USI0|RS17_ROSS1 30S ribosomal protein S17 OS=Roseiflexus sp. (strain RS-1)
GN=rpsQ PE=3 SV=1
Length = 86
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 5 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLS 64
VG VVSNKMQK+VVVAVD L H +Y + ++RTSKF AHDE QC IGD VR+ +RPLS
Sbjct: 11 VGRVVSNKMQKTVVVAVDYLKPHPLYRKIIRRTSKFHAHDE-QQCRIGDIVRIGETRPLS 69
Query: 65 KHKHWAVAEILKK 77
K K W V EI+K+
Sbjct: 70 KTKRWEVVEIIKR 82
>sp|B1JDX5|RS17_PSEPW 30S ribosomal protein S17 OS=Pseudomonas putida (strain W619)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 59/78 (75%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G VVS+KM K++ V ++R H +Y +YVKR++K AHDE+NQC IGD+V + +
Sbjct: 8 VRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVSIRET 67
Query: 61 RPLSKHKHWAVAEILKKA 78
RPL+K K WA+ E+L++A
Sbjct: 68 RPLAKTKSWALVEVLERA 85
>sp|B0KK76|RS17_PSEPG 30S ribosomal protein S17 OS=Pseudomonas putida (strain GB-1)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 59/78 (75%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G VVS+KM K++ V ++R H +Y +YVKR++K AHDE+NQC IGD+V + +
Sbjct: 8 VRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVSIRET 67
Query: 61 RPLSKHKHWAVAEILKKA 78
RPL+K K WA+ E+L++A
Sbjct: 68 RPLAKTKSWALVEVLERA 85
>sp|Q1IFV7|RS17_PSEE4 30S ribosomal protein S17 OS=Pseudomonas entomophila (strain L48)
GN=rpsQ PE=3 SV=1
Length = 88
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 59/78 (75%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G VVS+KM K++ V ++R H +Y +YVKR++K AHDE+NQC IGD+V + +
Sbjct: 8 VRTLTGRVVSDKMDKTITVLIERRVKHPIYGKYVKRSTKLHAHDESNQCKIGDKVSIRET 67
Query: 61 RPLSKHKHWAVAEILKKA 78
RPL+K K WA+ E+L++A
Sbjct: 68 RPLAKTKSWALVEVLERA 85
>sp|A7HBM7|RS17_ANADF 30S ribosomal protein S17 OS=Anaeromyxobacter sp. (strain
Fw109-5) GN=rpsQ PE=3 SV=1
Length = 85
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
KS +G+VVSNKM K+VVV V+R Y + VKR K+ AHDENN C IGD+VR+ +R
Sbjct: 7 KSRIGVVVSNKMAKTVVVKVERRVADPKYGKIVKRAEKYKAHDENNACQIGDKVRIVETR 66
Query: 62 PLSKHKHWAVAEILKKARI 80
P+SK K W +AE L+KA +
Sbjct: 67 PMSKDKRWRIAETLEKAEV 85
>sp|A1ALV0|RS17_PELPD 30S ribosomal protein S17 OS=Pelobacter propionicus (strain DSM
2379) GN=rpsQ PE=3 SV=1
Length = 82
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G+VVS+KM K+VVV VDRL H VYN+Y+KR++K+ HDENN C IGDRV++ RPLSK
Sbjct: 12 GVVVSDKMDKTVVVKVDRLIKHPVYNKYIKRSAKYKVHDENNVCKIGDRVQIIECRPLSK 71
Query: 66 HKHWAVAEI 74
K W + +I
Sbjct: 72 DKRWNLKQI 80
>sp|Q8YPI8|RS17_NOSS1 30S ribosomal protein S17 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rpsQ PE=3 SV=1
Length = 81
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VGLVVS+KMQK+VVVA++ H Y + V +T ++ AHDE+N+C +GDRVR+ +
Sbjct: 3 IKERVGLVVSDKMQKTVVVAIENRAPHPKYGKIVVKTRRYKAHDEDNKCKVGDRVRIQET 62
Query: 61 RPLSKHKHWAVAEIL 75
RPLSK K W VAEIL
Sbjct: 63 RPLSKTKRWQVAEIL 77
>sp|Q3MFB2|RS17_ANAVT 30S ribosomal protein S17 OS=Anabaena variabilis (strain ATCC
29413 / PCC 7937) GN=rpsQ PE=3 SV=1
Length = 81
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K VGLVVS+KMQK+VVVA++ H Y + V +T ++ AHDE+N+C +GDRVR+ +
Sbjct: 3 IKERVGLVVSDKMQKTVVVAIENRAPHPKYGKIVVKTRRYKAHDEDNKCKVGDRVRIQET 62
Query: 61 RPLSKHKHWAVAEIL 75
RPLSK K W VAEIL
Sbjct: 63 RPLSKTKRWQVAEIL 77
>sp|Q7V9X1|RS17_PROMA 30S ribosomal protein S17 OS=Prochlorococcus marinus (strain SARG
/ CCMP1375 / SS120) GN=rpsQ PE=3 SV=1
Length = 88
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
+K +G VVS+KM K+VVVAV F H +Y + V RT+++ AHDE N C +GDRVR+ +
Sbjct: 3 LKERLGTVVSDKMDKTVVVAVVNRFPHSIYQKTVSRTTRYKAHDEENNCKVGDRVRITET 62
Query: 61 RPLSKHKHWAVAEILKKAR 79
RPLS K W+VAE+L+ +
Sbjct: 63 RPLSATKRWSVAEVLRTTK 81
>sp|Q12SV0|RS17_SHEDO 30S ribosomal protein S17 OS=Shewanella denitrificans (strain
OS217 / ATCC BAA-1090 / DSM 15013) GN=rpsQ PE=3 SV=1
Length = 82
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V +
Sbjct: 5 IRTLQGRVTSNKMDKSITVAIERQVKHPLYGKYIKRTTKIHAHDETNQCNEGDVVTISQC 64
Query: 61 RPLSKHKHWAVAEILKKA 78
RPLSK K WA+ E++ KA
Sbjct: 65 RPLSKTKSWALVEVVTKA 82
>sp|B4F1J3|RS17_PROMH 30S ribosomal protein S17 OS=Proteus mirabilis (strain HI4320)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 60/78 (76%)
Query: 1 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPS 60
++++ G VVS+KM+KSVVVA+DR+ H +Y ++++RT+K HDENN+C +GD V + +
Sbjct: 5 IRTLQGRVVSDKMEKSVVVAIDRMVKHPLYGKFIRRTTKLHVHDENNECGMGDVVEIRQT 64
Query: 61 RPLSKHKHWAVAEILKKA 78
RP+SK K WA+ +++KA
Sbjct: 65 RPISKTKSWALVRVVEKA 82
>sp|B7VLE8|RS17_VIBSL 30S ribosomal protein S17 OS=Vibrio splendidus (strain LGP32)
GN=rpsQ PE=3 SV=1
Length = 84
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 56/75 (74%)
Query: 6 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSK 65
G V+S+KM KS+VVA++R H +Y +++KRT+K AHDE+N C +GD+V + RPLSK
Sbjct: 10 GRVISDKMDKSIVVAIERTVKHPIYGKFIKRTTKVHAHDEDNTCGLGDKVEIAECRPLSK 69
Query: 66 HKHWAVAEILKKARI 80
K W + ++L+KA+I
Sbjct: 70 TKSWTLVKVLEKAKI 84
>sp|Q3A6N8|RS17_PELCD 30S ribosomal protein S17 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rpsQ PE=3 SV=1
Length = 88
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 57/76 (75%)
Query: 2 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSR 61
K+ VG+V+S+KM K+VVV VD++ H +Y +Y+KR F AHDE N+CN+GD+V + +R
Sbjct: 9 KTRVGVVISDKMDKTVVVKVDQMVKHPIYKKYIKRRVTFKAHDEENRCNVGDKVSVVETR 68
Query: 62 PLSKHKHWAVAEILKK 77
PLS+ K W V EIL+K
Sbjct: 69 PLSRDKRWRVREILEK 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.126 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,253,702
Number of Sequences: 539616
Number of extensions: 1133552
Number of successful extensions: 3527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2689
Number of HSP's gapped (non-prelim): 805
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)