BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034024
MITRSNLAEQLREYQNRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELVILAFLVFSAV
SLYFRHMRLAIILVSITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

High Scoring Gene Products

Symbol, full name Information P value
AT1G20460 protein from Arabidopsis thaliana 1.2e-28
AT1G76185 protein from Arabidopsis thaliana 6.4e-28

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034024
        (106 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2034362 - symbol:AT1G20460 "AT1G20460" species...   319  1.2e-28   1
TAIR|locus:505006224 - symbol:AT1G76185 "AT1G76185" speci...   312  6.4e-28   1


>TAIR|locus:2034362 [details] [associations]
            symbol:AT1G20460 "AT1G20460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AY140068
            EMBL:BT002145 IPI:IPI00540765 RefSeq:NP_173470.1 UniGene:At.43871
            PRIDE:Q8L6Z1 EnsemblPlants:AT1G20460.1 GeneID:838634
            KEGG:ath:AT1G20460 TAIR:At1g20460 eggNOG:NOG298707
            HOGENOM:HOG000005691 InParanoid:Q8L6Z1 OMA:MLLLLCM PhylomeDB:Q8L6Z1
            ProtClustDB:CLSN2679406 Genevestigator:Q8L6Z1 Uniprot:Q8L6Z1
        Length = 106

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 63/90 (70%), Positives = 71/90 (78%)

Query:     1 MITRSNLAEQLREYQNRSKHEWAXXXXXXXXXXXXXXRVDVVIFVIWELVILAFLVFSAV 60
             MITRSNLAEQLREYQ RSKH+WA              RVDVV+FVIWELVILAF VFSAV
Sbjct:     1 MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query:    61 SLYFRHMRLAIILVSITMLLLLCMKVTKQV 90
             SLYF+ ++LA ILV +T+LLL+CMKVTKQV
Sbjct:    61 SLYFKRLQLAFILVCVTLLLLICMKVTKQV 90


>TAIR|locus:505006224 [details] [associations]
            symbol:AT1G76185 "AT1G76185" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            eggNOG:NOG298707 HOGENOM:HOG000005691 ProtClustDB:CLSN2679406
            EMBL:AY086332 EMBL:BT024752 EMBL:AK220990 IPI:IPI00532828
            RefSeq:NP_565127.1 UniGene:At.34694 EnsemblPlants:AT1G76185.1
            GeneID:843951 KEGG:ath:AT1G76185 TAIR:At1g76185 InParanoid:Q8LCY3
            OMA:IWELLIL PhylomeDB:Q8LCY3 Genevestigator:Q8LCY3 Uniprot:Q8LCY3
        Length = 106

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 61/90 (67%), Positives = 71/90 (78%)

Query:     1 MITRSNLAEQLREYQNRSKHEWAXXXXXXXXXXXXXXRVDVVIFVIWELVILAFLVFSAV 60
             MITRSNLAEQLREYQ RSKH+WA              RVDVV+FVIWELV+LA +VFSAV
Sbjct:     1 MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVMLALVVFSAV 60

Query:    61 SLYFRHMRLAIILVSITMLLLLCMKVTKQV 90
             SLYFR ++LA IL+ +T+LLLLCMK+TKQV
Sbjct:    61 SLYFRRLQLAFILLCVTLLLLLCMKITKQV 90


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.336   0.139   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      106        78   0.00091  102 3  10 21  0.35    28
                                                     29  0.38    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  130 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.00u 0.09s 10.09t   Elapsed:  00:00:01
  Total cpu time:  10.00u 0.09s 10.09t   Elapsed:  00:00:01
  Start:  Fri May 10 12:15:42 2013   End:  Fri May 10 12:15:43 2013

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