Query 034024
Match_columns 106
No_of_seqs 12 out of 14
Neff 2.3
Searched_HMMs 29240
Date Mon Mar 25 15:02:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m1f_V VOPL, putative uncharac 63.3 3.5 0.00012 23.9 1.6 11 3-13 5-15 (31)
2 1gk6_A Vimentin; intermediate 48.5 8.4 0.00029 23.6 1.6 14 3-16 19-32 (59)
3 2knc_B Integrin beta-3; transm 40.4 64 0.0022 20.8 5.0 18 70-87 18-35 (79)
4 4dkl_A MU-type opioid receptor 40.4 49 0.0017 23.6 4.8 17 37-53 131-147 (464)
5 3uon_A Human M2 muscarinic ace 40.3 1E+02 0.0034 22.1 6.6 17 37-53 138-154 (467)
6 3tx3_A Uncharacterized protein 38.3 82 0.0028 23.7 6.0 37 64-100 167-205 (249)
7 1gk4_A Vimentin; intermediate 37.9 15 0.00051 23.6 1.6 14 3-16 45-58 (84)
8 3ogl_Q JAZ1 incomplete degron 37.8 18 0.00061 19.2 1.6 19 80-98 2-20 (21)
9 2xv5_A Lamin-A/C; structural p 37.3 15 0.00053 23.7 1.6 13 3-15 24-36 (74)
10 1x8y_A Lamin A/C; structural p 34.4 18 0.00062 23.4 1.6 14 3-16 47-60 (86)
11 3tnu_B Keratin, type II cytosk 31.8 21 0.00071 24.2 1.6 14 3-16 94-107 (129)
12 3aqp_A Probable secdf protein- 31.7 1.3E+02 0.0046 25.5 6.9 26 40-65 269-294 (741)
13 3tnu_A Keratin, type I cytoske 31.4 21 0.00072 24.3 1.6 14 3-16 96-109 (131)
14 3pbl_A D(3) dopamine receptor, 30.3 96 0.0033 22.4 5.1 58 37-94 157-228 (481)
15 3e7l_A Transcriptional regulat 30.1 19 0.00065 21.1 1.1 19 1-19 43-61 (63)
16 3mov_A Lamin-B1; LMNB1, B-type 29.4 24 0.00083 23.5 1.6 14 3-16 56-69 (95)
17 3oru_A DUF1989 family protein; 28.2 23 0.00077 27.3 1.5 28 4-31 145-172 (234)
18 2dw3_A Intrinsic membrane prot 24.9 71 0.0024 21.4 3.3 34 38-82 19-56 (77)
19 4ea3_A Fusion protein of nocic 24.5 1.9E+02 0.0065 21.1 5.8 17 37-53 239-255 (434)
20 3cx5_D Cytochrome C1, heme pro 22.0 1.4E+02 0.0049 23.1 5.0 33 36-68 185-231 (248)
21 3odu_A C-X-C chemokine recepto 20.7 1.5E+02 0.0052 21.5 4.6 22 71-92 217-238 (502)
No 1
>3m1f_V VOPL, putative uncharacterized protein VPA1370; actin, actin-binding protein, crosslinking, nucleator, prote protein interaction; HET: HIC ATP; 2.89A {Oryctolagus cuniculus}
Probab=63.31 E-value=3.5 Score=23.87 Aligned_cols=11 Identities=45% Similarity=0.679 Sum_probs=9.3
Q ss_pred chhHHHHHHHH
Q 034024 3 TRSNLAEQLRE 13 (106)
Q Consensus 3 TRskLvEQLRe 13 (106)
.||||.||.|.
T Consensus 5 drSKLMEqIRq 15 (31)
T 3m1f_V 5 DHSKLMEQIRQ 15 (31)
T ss_dssp THHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 59999999874
No 2
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=48.51 E-value=8.4 Score=23.56 Aligned_cols=14 Identities=7% Similarity=0.045 Sum_probs=11.6
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 19 ~r~e~~~q~~eYq~ 32 (59)
T 1gk6_A 19 LENEVARLKKLVGD 32 (59)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 47788899999993
No 3
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=40.37 E-value=64 Score=20.78 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 034024 70 AIILVSITMLLLLCMKVT 87 (106)
Q Consensus 70 s~~~ic~~ilL~~~lkit 87 (106)
.+.++.+|+++..+.|+-
T Consensus 18 i~gilliGllllliwk~~ 35 (79)
T 2knc_B 18 MGAILLIGLAALLIWKLL 35 (79)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344566777777766643
No 4
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=40.36 E-value=49 Score=23.65 Aligned_cols=17 Identities=18% Similarity=0.245 Sum_probs=9.7
Q ss_pred chhHHHHHHHHHHHHHH
Q 034024 37 SRVDVVIFVIWELVILA 53 (106)
Q Consensus 37 sr~dvvv~v~w~llf~~ 53 (106)
.+.-.+++++|.+-+++
T Consensus 131 ~~~~~~~~~~W~~~~~~ 147 (464)
T 4dkl_A 131 RNAKIVNVCNWILSSAI 147 (464)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred cHhHHhHHHHHHHHHHH
Confidence 34455667777655443
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=40.27 E-value=1e+02 Score=22.11 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=10.4
Q ss_pred chhHHHHHHHHHHHHHH
Q 034024 37 SRVDVVIFVIWELVILA 53 (106)
Q Consensus 37 sr~dvvv~v~w~llf~~ 53 (106)
.+.-.+++++|.+-+++
T Consensus 138 ~~~~~~i~~~W~~~~~~ 154 (467)
T 3uon_A 138 KMAGMMIAAAWVLSFIL 154 (467)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 44456777788665543
No 6
>3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis}
Probab=38.32 E-value=82 Score=23.70 Aligned_cols=37 Identities=11% Similarity=-0.006 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhh
Q 034024 64 FRHMRLAIILVSITMLLLLCMK--VTKQVRLARKKKRRM 100 (106)
Q Consensus 64 fr~~~Ls~~~ic~~ilL~~~lk--itrq~rlarkreRrl 100 (106)
.=++.+.+-.++....=+...+ ++++++.+..|++|.
T Consensus 167 vl~~~~~~~~lg~ey~d~~~~r~~~~~~~~~~~lr~~r~ 205 (249)
T 3tx3_A 167 VLWYIFVCWMMSIQYLDYPFDNHKLSFPRMRSELHQQRS 205 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhh
Confidence 4445555555666555555444 677777776666663
No 7
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=37.91 E-value=15 Score=23.56 Aligned_cols=14 Identities=43% Similarity=0.833 Sum_probs=11.5
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 45 ~r~e~~~q~~EYq~ 58 (84)
T 1gk4_A 45 MKEEMARHLREYQD 58 (84)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 47788899999994
No 8
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=37.79 E-value=18 Score=19.21 Aligned_cols=19 Identities=21% Similarity=0.340 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 034024 80 LLLCMKVTKQVRLARKKKR 98 (106)
Q Consensus 80 L~~~lkitrq~rlarkreR 98 (106)
+|+.-|.|=|+=+.++|+|
T Consensus 2 lp~aRk~SLqRFleKRk~R 20 (21)
T 3ogl_Q 2 LPIARRASLHRFLEKRKDR 20 (26)
T ss_pred cchhHHHHHHHHHHHhhcc
Confidence 5778888999888888876
No 9
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=37.32 E-value=15 Score=23.68 Aligned_cols=13 Identities=46% Similarity=0.777 Sum_probs=11.2
Q ss_pred chhHHHHHHHHHh
Q 034024 3 TRSNLAEQLREYQ 15 (106)
Q Consensus 3 TRskLvEQLReyQ 15 (106)
.|+.+..|++|||
T Consensus 24 ~r~e~~~ql~EYq 36 (74)
T 2xv5_A 24 MRARMQQQLDEYQ 36 (74)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4778889999999
No 10
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=34.43 E-value=18 Score=23.36 Aligned_cols=14 Identities=43% Similarity=0.743 Sum_probs=11.4
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 47 ~r~e~~~ql~EYq~ 60 (86)
T 1x8y_A 47 MRARMQQQLDEYQE 60 (86)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 47788899999984
No 11
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=31.79 E-value=21 Score=24.18 Aligned_cols=14 Identities=43% Similarity=0.795 Sum_probs=11.5
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 94 ~r~e~~~ql~EYq~ 107 (129)
T 3tnu_B 94 AKQDMARLLREYQE 107 (129)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46788899999984
No 12
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=31.73 E-value=1.3e+02 Score=25.54 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034024 40 DVVIFVIWELVILAFLVFSAVSLYFR 65 (106)
Q Consensus 40 dvvv~v~w~llf~~l~v~s~vtlYfr 65 (106)
|.+-...+++++.+++++-++.+|||
T Consensus 269 ~~~~~~~~a~~i~~~lv~l~l~l~~r 294 (741)
T 3aqp_A 269 DAIQAGIRSALIGTLAIFLLIFAYYG 294 (741)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44445567777777788888889998
No 13
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=31.40 E-value=21 Score=24.26 Aligned_cols=14 Identities=29% Similarity=0.482 Sum_probs=11.5
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 96 ~r~em~~ql~EYq~ 109 (131)
T 3tnu_A 96 LRCEMEQQNQEYKI 109 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46788899999984
No 14
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=30.32 E-value=96 Score=22.39 Aligned_cols=58 Identities=12% Similarity=0.201 Sum_probs=28.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034024 37 SRVDVVIFVIWELVILAFLVFSA--------------VSLYFRHMRLAIILVSITMLLLLCMKVTKQVRLAR 94 (106)
Q Consensus 37 sr~dvvv~v~w~llf~~l~v~s~--------------vtlYfr~~~Ls~~~ic~~ilL~~~lkitrq~rlar 94 (106)
.+.=.+++++|.+-+++-+.... -..|.-..-+.+.++.+.+++..-.+|-+..+.++
T Consensus 157 ~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~ 228 (481)
T 3pbl_A 157 RRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISNPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRR 228 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCCSCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheecccCCCCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455677778655443322111 00133334444555666666666666666544433
No 15
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=30.14 E-value=19 Score=21.06 Aligned_cols=19 Identities=32% Similarity=0.326 Sum_probs=15.8
Q ss_pred CcchhHHHHHHHHHhhhhh
Q 034024 1 MITRSNLAEQLREYQNRSK 19 (106)
Q Consensus 1 mITRskLvEQLReyQiRs~ 19 (106)
+|+|+.|-..+++|.|..+
T Consensus 43 Gisr~tL~rklkk~gi~~~ 61 (63)
T 3e7l_A 43 GIDLSNLYRKIKSLNIRVK 61 (63)
T ss_dssp TCCHHHHHHHHHHTTCCCC
T ss_pred CcCHHHHHHHHHHhCCCCC
Confidence 4789999999999988654
No 16
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=29.37 E-value=24 Score=23.49 Aligned_cols=14 Identities=29% Similarity=0.703 Sum_probs=11.4
Q ss_pred chhHHHHHHHHHhh
Q 034024 3 TRSNLAEQLREYQN 16 (106)
Q Consensus 3 TRskLvEQLReyQi 16 (106)
+|+.+..|++|||.
T Consensus 56 ~r~e~~~ql~EYq~ 69 (95)
T 3mov_A 56 IRDQMQQQLNDYEQ 69 (95)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46788889999984
No 17
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=28.17 E-value=23 Score=27.30 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHhhhhhcccceeeeecCC
Q 034024 4 RSNLAEQLREYQNRSKHEWASVSFFSST 31 (106)
Q Consensus 4 RskLvEQLReyQiRs~h~~aals~fS~~ 31 (106)
|+|+...|.+|.+..++-|+.++||+.+
T Consensus 145 ~dN~~~ala~~Gl~~rdv~~~iN~FmnV 172 (234)
T 3oru_A 145 TDNLRMALGALGLRPTTVPCPLNLWMNT 172 (234)
T ss_dssp HHHHHHHHHTTTCCCSSCCCCEEETCCC
T ss_pred HHHHHHHHHHhCCCccccCCceEeEEcc
Confidence 7899999999999999999999999985
No 18
>2dw3_A Intrinsic membrane protein PUFX; quinone exchange, photosynthesis, light- harvesting, GXXXG motif, dimerization; NMR {Rhodobacter sphaeroides} PDB: 2ita_A
Probab=24.95 E-value=71 Score=21.42 Aligned_cols=34 Identities=12% Similarity=0.048 Sum_probs=21.8
Q ss_pred hhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034024 38 RVDVVIFV----IWELVILAFLVFSAVSLYFRHMRLAIILVSITMLLLL 82 (106)
Q Consensus 38 r~dvvv~v----~w~llf~~l~v~s~vtlYfr~~~Ls~~~ic~~ilL~~ 82 (106)
|.|+.-.. .||-++|+...+..+++| |+|.+||-
T Consensus 19 r~~i~~qMlkGAg~AAv~f~~~~~~lv~l~-----------~iG~~LPE 56 (77)
T 2dw3_A 19 RLWVAFQMMKGAGWAGGVFFGTLLLIGFFR-----------VVGRMLPI 56 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHCTTT
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHH-----------HHHHhCch
Confidence 45555444 466777777777777776 46666664
No 19
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=24.53 E-value=1.9e+02 Score=21.06 Aligned_cols=17 Identities=29% Similarity=0.573 Sum_probs=9.7
Q ss_pred chhHHHHHHHHHHHHHH
Q 034024 37 SRVDVVIFVIWELVILA 53 (106)
Q Consensus 37 sr~dvvv~v~w~llf~~ 53 (106)
.+.-.+++++|.+-++.
T Consensus 239 ~~~~~~i~~~W~~s~~~ 255 (434)
T 4ea3_A 239 SKAQAVNVAIWALASVV 255 (434)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhhHHhhhhhhhHHHHH
Confidence 44455667777655443
No 20
>3cx5_D Cytochrome C1, heme protein, mitochondrial; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: a.3.1.3 f.23.11.1 PDB: 1kyo_D* 2ibz_D* 3cxh_D* 1kb9_D* 1p84_D* 1ezv_D*
Probab=21.98 E-value=1.4e+02 Score=23.06 Aligned_cols=33 Identities=15% Similarity=0.340 Sum_probs=20.9
Q ss_pred cchhHHHHHHHHHH-------------HHHHHHHHHHHHHHH-HHHH
Q 034024 36 SSRVDVVIFVIWEL-------------VILAFLVFSAVSLYF-RHMR 68 (106)
Q Consensus 36 ~sr~dvvv~v~w~l-------------lf~~l~v~s~vtlYf-r~~~ 68 (106)
+.-.||+-++-|+- ++.+|++++.++.|. |.+|
T Consensus 185 q~a~Dvv~FL~w~aEP~~~~Rk~~G~~vl~fL~il~~l~y~~kr~~W 231 (248)
T 3cx5_D 185 QMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKW 231 (248)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45579999998863 455556666666555 3444
No 21
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=20.70 E-value=1.5e+02 Score=21.47 Aligned_cols=22 Identities=5% Similarity=0.052 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 034024 71 IILVSITMLLLLCMKVTKQVRL 92 (106)
Q Consensus 71 ~~~ic~~ilL~~~lkitrq~rl 92 (106)
+.++.+.+++..-.+|-+..+.
T Consensus 217 ~~~~p~~ii~~~y~~I~~~l~~ 238 (502)
T 3odu_A 217 GLILPGIVILSCYCIIISKLSH 238 (502)
T ss_dssp HTHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555555566555443
Done!