BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034035
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RUW5|SCP8_ARATH Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8
PE=1 SV=2
Length = 433
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 20/98 (20%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNAMVCL------LIF 64
VG+GF +S+ KTGD + T++FL+K H Q +N + + +I
Sbjct: 125 VGSGFSYSKTPI-DKTGDISEVKRTHEFLQKWLSRHP----QYFSNPLYVVGDSYSGMIV 179
Query: 65 PQLMLIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
P L+ E+S GN + EPP+NL+ Y+L NP
Sbjct: 180 PALV-----QEIS---QGNYICCEPPINLQ-GYMLGNP 208
>sp|Q9CAU2|SCP5_ARATH Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5
PE=2 SV=2
Length = 438
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VGTGF +SR Q +K D+ ++FL+K L K+Q+ ++ V + ++
Sbjct: 134 VGTGFSYSRTQQYNKPSDSGEAKRIHEFLQK-----WLSKHQEFSSNPFYVAGDSYSGMV 188
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+ T E+S GN PP+NL+ Y+L NP
Sbjct: 189 VPATVQEIS---KGNYQCCSPPINLQ-GYVLGNP 218
>sp|Q8RWJ6|SCP1_ARATH Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1
PE=2 SV=1
Length = 441
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNAMVCLLIFPQLMLI 70
VGTGF +SR Q +K D+ ++FL+K H + V + L++
Sbjct: 135 VGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPF---YVAGDSYSGLVVP 191
Query: 71 MTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
T E+S GN PP+NL+ Y+L NP
Sbjct: 192 ATVQEIS---KGNYECCNPPINLQ-GYVLGNP 219
>sp|Q9C7Z9|SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18
PE=2 SV=2
Length = 464
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 19/98 (19%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNAM------VCLLIF 64
VGTG+ +S K DT TY+FL+K L+ Q V+N + ++
Sbjct: 131 VGTGYSYSTTPLSYKPSDTGEAKQTYEFLQK----WLVENPQFVSNPIYVGGDSYAGIVV 186
Query: 65 PQLMLIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
P + V + GNE G++P +NLK Y+L NP
Sbjct: 187 PAI--------VQQISIGNEHGYKPQINLK-GYILGNP 215
>sp|Q9SQX6|SCP7_ARATH Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7
PE=2 SV=1
Length = 437
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQ--VTNAMVCLLIFPQLM 68
VGTGF +SR +K D+ ++FL K H V C ++ P L+
Sbjct: 131 VGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPALV 190
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
E+S GN + +PP+NL+ Y+L NP
Sbjct: 191 -----QEIS---KGNYVCCKPPINLQ-GYILGNP 215
>sp|Q9CAU3|SCP2_ARATH Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2
PE=2 SV=1
Length = 441
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VGTGF +SR Q +K D+ ++FL+K L K+Q+ ++ V + L+
Sbjct: 135 VGTGFSYSRTQQFNKPSDSGEAKRIHEFLQK-----WLGKHQEFSSNPFYVAGDSYSGLV 189
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+ T E+S GN PP+NL+ Y+L NP
Sbjct: 190 VPATVQEIS---KGNYECCNPPINLQ-GYVLGNP 219
>sp|O64811|SCP9_ARATH Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9
PE=2 SV=1
Length = 437
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQ-------VTNAMVCLLI 63
VG+GF +S+ +T DT + ++FL+K LIK+ Q V +I
Sbjct: 127 VGSGFSYSKT-PIERTSDTSEVKKIHEFLQK-----WLIKHPQFLSNPFYVVGDSYSGMI 180
Query: 64 FPQLMLIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
P L+ HE+S GN + PP+NL+ Y+L NP
Sbjct: 181 VPALV-----HEIS---KGNYICCNPPINLQ-GYVLGNP 210
>sp|Q9CAU0|SCP6_ARATH Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6
PE=2 SV=2
Length = 452
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VGTGF +SR +K DT ++FL+K L K+Q+ ++ V + +
Sbjct: 135 VGTGFSYSRTELFNKPSDTGEAKRIHEFLQK-----WLGKHQEFSSNPFYVGGDSYSGIT 189
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+ T E+S GN +PP+NL+ Y+L NP
Sbjct: 190 VPATVQEIS---KGNYQCCKPPINLQ-GYMLGNP 219
>sp|Q9NP58|ABCB6_HUMAN ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo
sapiens GN=ABCB6 PE=1 SV=1
Length = 842
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 14/65 (21%)
Query: 13 TGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNAMVCLLIFPQLMLIMT 72
T ++F + LQG TG T +++ F L I+ QQ T+ V LLIF L
Sbjct: 307 TSYVFLKFLQGGGTGSTGFVSNLRTF--------LWIRVQQFTSRRVELLIFSHL----- 353
Query: 73 NHEVS 77
HE+S
Sbjct: 354 -HELS 357
>sp|O81009|SCP12_ARATH Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12
PE=2 SV=1
Length = 435
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQ--VTNAMVCLLIFPQLM 68
+G GF +SR+ DT + + ++FL+K H + +I P L+
Sbjct: 127 IGAGFSYSRIPLIDTPSDTGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPALV 186
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
E+S GN + +PP+NL+ Y+L NP
Sbjct: 187 -----QEIS---KGNYICCKPPINLQ-GYILGNP 211
>sp|Q9CAU4|SCP4_ARATH Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4
PE=2 SV=1
Length = 441
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VGTGF +SR +K DT ++FL+K L K+Q+ ++ V + L+
Sbjct: 135 VGTGFSYSRTQLFNKPSDTGEAKRIHEFLQK-----WLGKHQEFSSNPFYVGGDSYSGLV 189
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+ T E+S GN P+NL+ Y+L NP
Sbjct: 190 VPATVQEIS---KGNCQCCNRPINLQ-GYVLGNP 219
>sp|Q2V465|SCP11_ARATH Serine carboxypeptidase-like 11 OS=Arabidopsis thaliana GN=SCPL11
PE=2 SV=2
Length = 433
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VG GF +SR DT + ++FL+K H +I P L+
Sbjct: 127 VGAGFSYSRAPLIDTPTDTGEVKRIHEFLQKWLSKHPQFSSNHFYAGGDSYSGMIVPALV 186
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
E+S GN + PP+NLK Y+L NP
Sbjct: 187 -----QEIS---KGNYICCNPPINLK-GYVLGNP 211
>sp|Q9CAU1|SCP3_ARATH Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3
PE=2 SV=1
Length = 441
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNHLLIKYQQVTNA--MVCLLIFPQLM 68
VG GF +SR +K D+ ++FL+K L K+Q+ ++ V + ++
Sbjct: 135 VGAGFSYSRTQLLNKPSDSGEAKRIHEFLQK-----WLGKHQEFSSNPFYVGGDSYSGMV 189
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+ T E+S GN PP+NL+ Y+L NP
Sbjct: 190 VPATVQEIS---KGNYECCNPPINLQ-GYVLGNP 219
>sp|Q8H780|SCP13_ARATH Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13
PE=2 SV=2
Length = 430
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNH 46
VG+GF +SR K DT + Y+FL+K H
Sbjct: 128 VGSGFSYSRTPLVDKISDTGEVKRIYEFLQKWLSKH 163
>sp|Q6F801|SECB_ACIAD Protein-export protein SecB OS=Acinetobacter sp. (strain ADP1)
GN=secB PE=3 SV=1
Length = 151
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N MV FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDMVTKGSFPQLLLTPINFDAEFEA 138
>sp|P77783|YNFF_ECOLI Probable dimethyl sulfoxide reductase chain YnfF OS=Escherichia
coli (strain K12) GN=ynfF PE=3 SV=4
Length = 807
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 31 NINHTYDFLR--KGCPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEAAGN 83
+INHT++ L+ C + I + +A C ++ P LM +S+E+AGN
Sbjct: 481 DINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGN 535
>sp|O64810|SCP10_ARATH Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10
PE=2 SV=1
Length = 437
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 1 MALHLHSRTKVGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNH--LLIKYQQVTNAM 58
MA ++ VG+GF +SR G K+ DT + ++FL+K H VT
Sbjct: 117 MANIIYLDQPVGSGFSYSRTPIG-KSSDTSEVKRIHEFLQKWLSKHPQFFSNPFYVTGDS 175
Query: 59 VCLLIFPQLMLIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP 102
+I P L+ E+S GN + + +NL+ Y+L NP
Sbjct: 176 YSGMIVPALV-----QEIS---KGNYICCKHLINLQ-GYVLGNP 210
>sp|Q9C7D2|SCP15_ARATH Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15
PE=2 SV=2
Length = 436
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Query: 11 VGTGFLFSRMLQGSKTGDTKNINHTYDFLRKGCPNH--LLIKYQQVTNAMVCLLIFPQLM 68
VGTGF +SR DT ++ +F+RK H VT + P ++
Sbjct: 130 VGTGFSYSRNPFADIPSDTGSVKRVNEFVRKWLAKHPEYFSNPFYVTGNSYSGKVIPAIV 189
Query: 69 LIMTNHEVSYEAAGNELGHEPPLNLKVSYLLSNP--YY 104
++N GN + +P +NL+ Y++ NP YY
Sbjct: 190 QEISN--------GNYICCKPQINLQ-GYVIGNPVAYY 218
>sp|B0V4V4|SECB_ACIBY Protein-export protein SecB OS=Acinetobacter baumannii (strain AYE)
GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
>sp|A3M237|SECB_ACIBT Protein-export protein SecB OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
>sp|B0VKR1|SECB_ACIBS Protein-export protein SecB OS=Acinetobacter baumannii (strain SDF)
GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
>sp|B2HTB2|SECB_ACIBC Protein-export protein SecB OS=Acinetobacter baumannii (strain
ACICU) GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
>sp|B7I5H3|SECB_ACIB5 Protein-export protein SecB OS=Acinetobacter baumannii (strain
AB0057) GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
>sp|B7H063|SECB_ACIB3 Protein-export protein SecB OS=Acinetobacter baumannii (strain
AB307-0294) GN=secB PE=3 SV=1
Length = 152
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 43 CPNHLLIKYQQVTNAMVCLLIFPQLMLIMTNHEVSYEA 80
CPN L ++ N +V FPQL+L N + +EA
Sbjct: 101 CPNILFPFLREAVNDLVTKGSFPQLLLTPINFDAEFEA 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,258,982
Number of Sequences: 539616
Number of extensions: 1297158
Number of successful extensions: 2494
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2479
Number of HSP's gapped (non-prelim): 27
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)