AmiGO: BLAST Results


BLAST match view associations BLAST with GR-RBP2 GR-RBP2 GR-RBP2 AT4G13850	protein from Arabidopsis thaliana	1.1e-16
BLAST match view associations BLAST with GRP4 GRP4 GRP4 AT3G23830	protein from Arabidopsis thaliana	3.3e-15
BLAST match view associations BLAST with GR-RBP3 GR-RBP3 GR-RBP3 AT5G61030	protein from Arabidopsis thaliana	1.1e-14
BLAST match view associations BLAST with AT3G08000 AT3G08000 AT3G08000	protein from Arabidopsis thaliana	2.1e-13
BLAST match view associations BLAST with GR-RBP5 GR-RBP5 GR-RBP5 AT1G74230	protein from Arabidopsis thaliana	4.3e-13
BLAST match view associations BLAST with RPS19 RPS19 RPS19 AT5G47320	protein from Arabidopsis thaliana	4.4e-13
BLAST match view associations BLAST with ORRM1 ORRM1 ORRM1 AT3G20930	protein from Arabidopsis thaliana	1.1e-12
BLAST match view associations BLAST with blt801 blt801 blt801 Glycine-rich RNA-binding protein blt801	protein from Hordeum vulgare	1.2e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with AT1G17640 AT1G17640 AT1G17640	protein from Arabidopsis thaliana	3.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Cricetulus griseus	3.1e-12
BLAST match view associations BLAST with CBU_1183 CBU_1183 CBU_1183 Glycine-rich RNA-binding protein	protein from Coxiella burnetii RSA 493	3.1e-12
BLAST match view associations BLAST with CBU_1183 CBU_1183 CBU_1183 nucleic acid binding domain protein	protein from Coxiella burnetii RSA 493	3.1e-12
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	protein from Mus musculus	3.1e-12
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	gene from Rattus norvegicus	3.1e-12
BLAST match view associations BLAST with GRP7 GRP7 GRP7 AT2G21660	protein from Arabidopsis thaliana	3.1e-12
BLAST match view associations BLAST with cirbp cirbp cirbp cold inducible RNA binding protein	gene_product from Danio rerio	3.1e-12
BLAST match view associations BLAST with RBMY1A1 RBMY1A1 RBMY1A1 RNA-binding motif protein, Y chromosome, family 1 member B	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with RBMXL1 RBMXL1 RBMXL1 RNA binding motif protein, X-linked-like-1	protein from Homo sapiens	4.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	4.9e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Bos taurus	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Sus scrofa	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Pongo abelii	5.0e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	5.2e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	5.9e-12
BLAST match view associations BLAST with ATRZ-1A ATRZ-1A ATRZ-1A AT3G26420	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with CCR1 CCR1 CCR1 AT4G39260	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with AT5G06210 AT5G06210 AT5G06210	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP cDNA FLJ52850, moderately similar to Cold-inducible RNA-binding protein	protein from Homo sapiens	6.5e-12
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	7.2e-12
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	1.0e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Gallus gallus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	1.2e-11
BLAST match view associations BLAST with Rbmx Rbmx Rbmx RNA binding motif protein, X-linked	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Rbmx	protein from Bos taurus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Pan troglodytes	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Macaca fascicularis	1.2e-11
BLAST match view associations BLAST with Rbmx Rbmx Rbmx RNA binding motif protein, X chromosome	protein from Mus musculus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Canis lupus familiaris	1.2e-11
BLAST match view associations BLAST with Rbmxl1 Rbmxl1 Rbmxl1 RNA binding motif protein, X linked-like-1	protein from Mus musculus	1.5e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RBM24 protein	protein from Bos taurus	1.7e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Homo sapiens	1.7e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Sus scrofa	2.1e-11
BLAST match view associations BLAST with rbm24a rbm24a rbm24a RNA binding motif protein 24a	gene_product from Danio rerio	2.2e-11
BLAST match view associations BLAST with AtRZ-1b AtRZ-1b AtRZ-1b AT1G60650	protein from Arabidopsis thaliana	2.4e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with cirbp-a cirbp-a cirbp-a Cold-inducible RNA-binding protein A	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with rbm24-a rbm24-a rbm24-a RNA-binding protein 24-A	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with rbm24 rbm24 rbm24 RNA-binding protein 24	protein from Xenopus (Silurana) tropicalis	2.8e-11
BLAST match view associations BLAST with rbm24-b rbm24-b rbm24-b RNA-binding protein 24-B	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	protein from Mus musculus	2.8e-11
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	gene from Rattus norvegicus	2.8e-11
BLAST match view associations BLAST with RBMY1D RBMY1D RBMY1D RNA-binding motif protein, Y chromosome, family 1 member D	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBMY1E RBMY1E RBMY1E RNA-binding motif protein, Y chromosome, family 1 member E	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBMY1J RBMY1J RBMY1J RNA-binding motif protein, Y chromosome, family 1 member F/J	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with rbm24b rbm24b rbm24b RNA binding motif protein 24b	gene_product from Danio rerio	2.8e-11
BLAST match view associations BLAST with RBMY1B RBMY1B RBMY1B RNA-binding motif protein, Y chromosome, family 1 member B	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1E RBMY1E RBMY1E RNA-binding motif protein, Y chromosome, family 1 member E	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1D RBMY1D RBMY1D RNA-binding motif protein, Y chromosome, family 1 member D	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1A1 RBMY1A1 RBMY1A1 RNA-binding motif protein, Y chromosome, family 1 member A1	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1C RBMY1C RBMY1C RNA-binding motif protein, Y chromosome, family 1 member C	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1F RBMY1F RBMY1F RNA-binding motif protein, Y chromosome, family 1 member F/J	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	3.5e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	3.5e-11
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	protein from Mus musculus	3.5e-11
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	gene from Rattus norvegicus	3.5e-11
BLAST match view associations BLAST with zgc:112425 zgc:112425 zgc:112425	gene_product from Danio rerio	3.5e-11
BLAST match view associations BLAST with AT4G26650 AT4G26650 AT4G26650	protein from Arabidopsis thaliana	3.5e-11
BLAST match view associations BLAST with Rbmxrtl Rbmxrtl Rbmxrtl RNA binding motif protein, X chromosome retrogene-like	gene from Rattus norvegicus	4.2e-11
BLAST match view associations BLAST with Rbmxl1 Rbmxl1 Rbmxl1 RNA binding motif protein, X-linked-like 1	gene from Rattus norvegicus	4.2e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Rana catesbeiana	4.5e-11
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif protein 3	protein from Mus musculus	4.5e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 Uncharacterized protein	protein from Bos taurus	5.8e-11
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	5.8e-11
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	5.8e-11
BLAST match view associations BLAST with AT5G54580 AT5G54580 AT5G54580	protein from Arabidopsis thaliana	5.8e-11
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034039
        (105 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119495 - symbol:GR-RBP2 "AT4G13850" species:3...   206  1.1e-16   1
TAIR|locus:2076096 - symbol:GRP4 "glycine-rich RNA-bindin...   192  3.3e-15   1
TAIR|locus:2159401 - symbol:GR-RBP3 "glycine-rich RNA-bin...   189  1.1e-14   1
TAIR|locus:2077427 - symbol:AT3G08000 species:3702 "Arabi...   175  2.1e-13   1
TAIR|locus:2019622 - symbol:GR-RBP5 "AT1G74230" species:3...   174  4.3e-13   1
TAIR|locus:2171539 - symbol:RPS19 "ribosomal protein S19"...   172  4.4e-13   1
TAIR|locus:2088756 - symbol:AT3G20930 species:3702 "Arabi...   174  1.1e-12   1
UNIPROTKB|Q43472 - symbol:blt801 "Glycine-rich RNA-bindin...   168  1.2e-12   1
UNIPROTKB|H3BR27 - symbol:RBMX "RNA-binding motif protein...   165  2.4e-12   1
UNIPROTKB|K7GKR9 - symbol:RBMX "Uncharacterized protein" ...   165  2.4e-12   1
UNIPROTKB|K7GMF5 - symbol:RBMX "Uncharacterized protein" ...   165  2.4e-12   1
UNIPROTKB|K7GNR2 - symbol:RBMX "Uncharacterized protein" ...   165  2.4e-12   1
UNIPROTKB|K7GQ39 - symbol:RBMX "Uncharacterized protein" ...   165  2.4e-12   1
TAIR|locus:2007903 - symbol:AT1G17640 species:3702 "Arabi...   170  3.0e-12   1
UNIPROTKB|K7ELT6 - symbol:CIRBP "Cold-inducible RNA-bindi...   164  3.1e-12   1
UNIPROTKB|P60826 - symbol:CIRBP "Cold-inducible RNA-bindi...   164  3.1e-12   1
UNIPROTKB|Q83CD7 - symbol:CBU_1183 "Glycine-rich RNA-bind...   164  3.1e-12   1
TIGR_CMR|CBU_1183 - symbol:CBU_1183 "nucleic acid binding...   164  3.1e-12   1
MGI|MGI:893588 - symbol:Cirbp "cold inducible RNA binding...   164  3.1e-12   1
RGD|620756 - symbol:Cirbp "cold inducible RNA binding pro...   164  3.1e-12   1
TAIR|locus:2049359 - symbol:GRP7 "AT2G21660" species:3702...   164  3.1e-12   1
ZFIN|ZDB-GENE-030131-5841 - symbol:cirbp "cold inducible ...   164  3.1e-12   1
ASPGD|ASPL0000040642 - symbol:AN2989 species:162425 "Emer...   163  3.9e-12   1
UNIPROTKB|F2Z2U1 - symbol:RBMY1A1 "RNA-binding motif prot...   163  3.9e-12   1
UNIPROTKB|Q96E39 - symbol:RBMXL1 "RNA binding motif prote...   169  4.4e-12   1
UNIPROTKB|H0Y6E7 - symbol:RBMX "RNA-binding motif protein...   165  4.9e-12   1
UNIPROTKB|Q3SZN4 - symbol:CIRBP "Uncharacterized protein"...   162  5.0e-12   1
UNIPROTKB|E2R6G2 - symbol:CIRBP "Uncharacterized protein"...   162  5.0e-12   1
UNIPROTKB|F6XHA7 - symbol:CIRBP "Uncharacterized protein"...   162  5.0e-12   1
UNIPROTKB|K7EJV5 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7ELV6 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7EMY9 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7ENX8 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7EPM4 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7EQR7 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|K7ER40 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|Q14011 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|F1S6R1 - symbol:CIRBP "Uncharacterized protein"...   162  5.0e-12   1
UNIPROTKB|Q5RF83 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  5.0e-12   1
UNIPROTKB|H3BT71 - symbol:RBMX "RNA-binding motif protein...   165  5.2e-12   1
UNIPROTKB|K7GRX3 - symbol:RBMX "Uncharacterized protein" ...   165  5.9e-12   1
TAIR|locus:2079276 - symbol:ATRZ-1A species:3702 "Arabido...   161  6.4e-12   1
TAIR|locus:2136298 - symbol:CCR1 "cold, circadian rhythm,...   161  6.4e-12   1
TAIR|locus:2160752 - symbol:AT5G06210 species:3702 "Arabi...   161  6.4e-12   1
UNIPROTKB|B4E2X2 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  6.5e-12   1
TAIR|locus:2077392 - symbol:AT3G07810 species:3702 "Arabi...   169  7.2e-12   1
UNIPROTKB|Q9DED4 - symbol:cirbp-b "Cold-inducible RNA-bin...   159  1.0e-11   1
UNIPROTKB|D6W5Y5 - symbol:CIRBP "Cold-inducible RNA-bindi...   162  1.2e-11   1
UNIPROTKB|F1NZD3 - symbol:RBMX "Uncharacterized protein" ...   165  1.2e-11   1
UNIPROTKB|F1RQ90 - symbol:RBMX "Uncharacterized protein" ...   165  1.2e-11   1
RGD|1565256 - symbol:Rbmx "RNA binding motif protein, X-l...   165  1.2e-11   1
UNIPROTKB|D3JUI8 - symbol:RBMX "RNA-binding motif protein...   165  1.2e-11   1
UNIPROTKB|P38159 - symbol:RBMX "RNA-binding motif protein...   165  1.2e-11   1
UNIPROTKB|A5A6M3 - symbol:RBMX "RNA-binding motif protein...   165  1.2e-11   1
UNIPROTKB|Q4R7F0 - symbol:RBMX "RNA-binding motif protein...   165  1.2e-11   1
MGI|MGI:1343044 - symbol:Rbmx "RNA binding motif protein,...   165  1.2e-11   1
UNIPROTKB|E2R068 - symbol:RBMX "Uncharacterized protein" ...   165  1.2e-11   1
MGI|MGI:1343045 - symbol:Rbmxl1 "RNA binding motif protei...   164  1.5e-11   1
UNIPROTKB|A6QPJ1 - symbol:RBM24 "Uncharacterized protein"...   157  1.7e-11   1
UNIPROTKB|Q9BX46 - symbol:RBM24 "RNA-binding protein 24" ...   157  1.7e-11   1
UNIPROTKB|F1RUJ2 - symbol:RBM24 "Uncharacterized protein"...   157  2.1e-11   1
ZFIN|ZDB-GENE-040628-1 - symbol:rbm24a "RNA binding motif...   156  2.2e-11   1
TAIR|locus:2036520 - symbol:AtRZ-1b "AtRZ-1b" species:370...   159  2.4e-11   1
UNIPROTKB|Q5ZJX4 - symbol:RBM38 "RNA-binding protein 38" ...   155  2.8e-11   1
UNIPROTKB|Q5ZMA3 - symbol:RBM24 "RNA-binding protein 24" ...   155  2.8e-11   1
UNIPROTKB|O93235 - symbol:cirbp-a "Cold-inducible RNA-bin...   155  2.8e-11   1
UNIPROTKB|Q6GQD3 - symbol:rbm24-a "RNA-binding protein 24...   155  2.8e-11   1
UNIPROTKB|Q6P8A7 - symbol:rbm24 "RNA-binding protein 24" ...   155  2.8e-11   1
UNIPROTKB|Q9I8B3 - symbol:rbm24-b "RNA-binding protein 24...   155  2.8e-11   1
MGI|MGI:1889294 - symbol:Rbm38 "RNA binding motif protein...   155  2.8e-11   1
RGD|1308503 - symbol:Rbm38 "RNA binding motif protein 38"...   155  2.8e-11   1
UNIPROTKB|B7ZMD9 - symbol:RBMY1D "RNA-binding motif prote...   163  2.8e-11   1
UNIPROTKB|J3KPK3 - symbol:RBMY1E "RNA-binding motif prote...   163  2.8e-11   1
UNIPROTKB|J3KQ82 - symbol:RBMY1J "RNA-binding motif prote...   163  2.8e-11   1
UNIPROTKB|E1BZ17 - symbol:RBM24 "RNA-binding protein 24" ...   155  2.8e-11   1
ZFIN|ZDB-GENE-060312-43 - symbol:rbm24b "RNA binding moti...   155  2.8e-11   1
UNIPROTKB|A6NDE4 - symbol:RBMY1B "RNA-binding motif prote...   163  3.2e-11   1
UNIPROTKB|A6NEQ0 - symbol:RBMY1E "RNA-binding motif prote...   163  3.2e-11   1
UNIPROTKB|P0C7P1 - symbol:RBMY1D "RNA-binding motif prote...   163  3.2e-11   1
UNIPROTKB|P0DJD3 - symbol:RBMY1A1 "RNA-binding motif prot...   163  3.2e-11   1
UNIPROTKB|P0DJD4 - symbol:RBMY1C "RNA-binding motif prote...   163  3.2e-11   1
UNIPROTKB|Q15415 - symbol:RBMY1F "RNA-binding motif prote...   163  3.2e-11   1
UNIPROTKB|F6VZ39 - symbol:RBM38 "RNA-binding protein 38" ...   154  3.5e-11   1
UNIPROTKB|Q9H0Z9 - symbol:RBM38 "RNA-binding protein 38" ...   154  3.5e-11   1
MGI|MGI:3610364 - symbol:Rbm24 "RNA binding motif protein...   154  3.5e-11   1
RGD|1584029 - symbol:Rbm24 "RNA binding motif protein 24"...   154  3.5e-11   1
ZFIN|ZDB-GENE-050417-329 - symbol:zgc:112425 "zgc:112425"...   154  3.5e-11   1
TAIR|locus:2133862 - symbol:AT4G26650 species:3702 "Arabi...   162  3.5e-11   1
RGD|1306751 - symbol:Rbmxrtl "RNA binding motif protein, ...   160  4.2e-11   1
RGD|1585845 - symbol:Rbmxl1 "RNA binding motif protein, X...   160  4.2e-11   1
UNIPROTKB|H9KZV5 - symbol:CIRBP "Uncharacterized protein"...   153  4.5e-11   1
UNIPROTKB|H9L0U4 - symbol:CIRBP "Uncharacterized protein"...   153  4.5e-11   1
UNIPROTKB|H9L3B3 - symbol:CIRBP "Uncharacterized protein"...   153  4.5e-11   1
UNIPROTKB|Q9PTX2 - symbol:cirbp "Cold-inducible RNA-bindi...   153  4.5e-11   1
MGI|MGI:1099460 - symbol:Rbm3 "RNA binding motif protein ...   153  4.5e-11   1
UNIPROTKB|G3V6P6 - symbol:Rbm3 "Putative RNA-binding prot...   153  4.5e-11   1
UNIPROTKB|E1BLB7 - symbol:RBM38 "Uncharacterized protein"...   152  5.8e-11   1
UNIPROTKB|A5GFN7 - symbol:RNPC1 "Uncharacterized protein"...   152  5.8e-11   1
UNIPROTKB|A5GFN8 - symbol:RNPC1 "Uncharacterized protein"...   152  5.8e-11   1
TAIR|locus:2172144 - symbol:AT5G54580 species:3702 "Arabi...   152  5.8e-11   1

WARNING:  Descriptions of 1307 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2119495 [details] [associations]
            symbol:GR-RBP2 "AT4G13850" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0009409 "response to cold"
            evidence=IGI;IEP;IMP] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0001072
            "RNA binding transcription antitermination factor activity"
            evidence=IDA] [GO:0006970 "response to osmotic stress"
            evidence=IMP] [GO:0009631 "cold acclimation" evidence=IMP]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0009845
            "seed germination" evidence=IMP] [GO:0031564 "transcription
            antitermination" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
            [GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0005507 GO:GO:0003723
            GO:GO:0006970 GO:GO:0009845 GO:GO:0003690 GO:GO:0003697
            eggNOG:COG0724 EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000276232
            EMBL:AJ002892 EMBL:AY072361 EMBL:BT002197 EMBL:AY085621 EMBL:X69377
            EMBL:Z18189 IPI:IPI00527583 PIR:S31443 PIR:T05254
            RefSeq:NP_193121.1 UniGene:At.15585 UniGene:At.2
            ProteinModelPortal:Q9SVM8 SMR:Q9SVM8 IntAct:Q9SVM8 STRING:Q9SVM8
            PaxDb:Q9SVM8 PRIDE:Q9SVM8 ProMEX:Q9SVM8 EnsemblPlants:AT4G13850.1
            GeneID:827019 KEGG:ath:AT4G13850 GeneFarm:3949 TAIR:At4g13850
            InParanoid:Q9SVM8 OMA:ISEMDGK PhylomeDB:Q9SVM8 ProtClustDB:PLN03134
            Genevestigator:Q9SVM8 Uniprot:Q9SVM8
        Length = 158

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 44/86 (51%), Positives = 58/86 (67%)

Query:     5 NGSVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVT 64
             NG+V  +  +   RL+S     TKLFIGGLS+ T++  L+DAF   G++++ KVI DR T
Sbjct:    18 NGNVPVTSMLGSLRLMS-----TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRET 72

Query:    65 GQSRGYGFVKFASEAAAGEAIKEMDG 90
             G+SRG+GFV F  E AA  AI EMDG
Sbjct:    73 GRSRGFGFVNFNDEGAATAAISEMDG 98


>TAIR|locus:2076096 [details] [associations]
            symbol:GRP4 "glycine-rich RNA-binding protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
            cell wall organization" evidence=RCA] [GO:0042545 "cell wall
            modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
            eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
            ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
            IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
            UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
            PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
            EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
            GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
            PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
        Length = 136

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 37/64 (57%), Positives = 48/64 (75%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             +KLF+GGLS+ T+++ LK AF   GE+ E  VI DR TG+SRG+GFV F+ E +A  AIK
Sbjct:    35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIK 94

Query:    87 EMDG 90
             EMDG
Sbjct:    95 EMDG 98


>TAIR|locus:2159401 [details] [associations]
            symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
            "copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
            to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
            HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
            IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
            ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
            PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
            KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
            HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
            ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
        Length = 309

 Score = 189 (71.6 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 39/87 (44%), Positives = 57/87 (65%)

Query:     4 LNGSVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRV 63
             LN  V  S    F  +   ++S  KLFIGG++Y  +E  L++AF ++GE+++ +VI DR 
Sbjct:    19 LNAQVSLSSPSLFQAIRCMSSS--KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRE 76

Query:    64 TGQSRGYGFVKFASEAAAGEAIKEMDG 90
             TG+SRG+GFV F S  AA  AI+ +DG
Sbjct:    77 TGRSRGFGFVTFTSSEAASSAIQALDG 103


>TAIR|locus:2077427 [details] [associations]
            symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
            EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
            ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
            GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
            OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
            Genevestigator:Q9SFB4 Uniprot:Q9SFB4
        Length = 143

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 36/70 (51%), Positives = 47/70 (67%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A+  +KLFIGGLS+  +E  LKDAF   GE+ EV++  D+ +G+SRG+GFV FA E  
Sbjct:    35 SSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGD 94

Query:    81 AGEAIKEMDG 90
             A  A   MDG
Sbjct:    95 ALSAKDAMDG 104


>TAIR|locus:2019622 [details] [associations]
            symbol:GR-RBP5 "AT1G74230" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005524
            "ATP binding" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005507 eggNOG:COG0724
            EMBL:AC020579 HSSP:Q14103 KO:K12741 EMBL:BT002037 EMBL:BT006315
            IPI:IPI00516639 PIR:F96770 RefSeq:NP_177563.1 UniGene:At.18152
            ProteinModelPortal:Q9C909 SMR:Q9C909 PaxDb:Q9C909 PRIDE:Q9C909
            EnsemblPlants:AT1G74230.1 GeneID:843763 KEGG:ath:AT1G74230
            GeneFarm:3954 TAIR:At1g74230 InParanoid:Q9C909 OMA:TERGSGF
            ProtClustDB:CLSN2914559 Genevestigator:Q9C909 Uniprot:Q9C909
        Length = 289

 Score = 174 (66.3 bits), Expect = 4.3e-13, P = 4.3e-13
 Identities = 34/82 (41%), Positives = 54/82 (65%)

Query:    11 SHSVRFTRLLSDAN--SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSR 68
             SH    + +L      S +K+F+GG+SY T+E  L++AF ++GE+++ K+I DR TG+SR
Sbjct:    16 SHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSR 75

Query:    69 GYGFVKFASEAAAGEAIKEMDG 90
             G+ FV F S   A  A+ ++DG
Sbjct:    76 GFAFVTFTSTEEASNAM-QLDG 96


>TAIR|locus:2171539 [details] [associations]
            symbol:RPS19 "ribosomal protein S19" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA;NAS] [GO:0015935 "small ribosomal
            subunit" evidence=IEA] [GO:0006354 "DNA-dependent transcription,
            elongation" evidence=RCA] [GO:0005763 "mitochondrial small
            ribosomal subunit" evidence=IDA] InterPro:IPR000504
            InterPro:IPR002222 InterPro:IPR005732 InterPro:IPR012677
            InterPro:IPR020934 InterPro:IPR023575 Pfam:PF00076 Pfam:PF00203
            PRINTS:PR00975 PROSITE:PS00323 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006412
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0003735 eggNOG:COG0724
            GO:GO:0005763 EMBL:AB018117 Gene3D:3.30.860.10 HAMAP:MF_00531
            SUPFAM:SSF54570 TIGRFAMs:TIGR01050 KO:K02965 EMBL:X78035
            EMBL:X77989 EMBL:AY045963 EMBL:AY091354 EMBL:Z18203 IPI:IPI00544075
            PIR:S71114 RefSeq:NP_568681.1 UniGene:At.5396
            ProteinModelPortal:P39697 SMR:P39697 STRING:P39697 PaxDb:P39697
            PRIDE:P39697 EnsemblPlants:AT5G47320.1 GeneID:834779
            KEGG:ath:AT5G47320 GeneFarm:3993 TAIR:At5g47320 InParanoid:P39697
            PhylomeDB:P39697 Genevestigator:P39697 GermOnline:AT5G47320
            Uniprot:P39697
        Length = 212

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 35/64 (54%), Positives = 45/64 (70%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TKL+IGGLS  T+E  LKDAF     + E +V+ ++VTG+SRGYGFV F SE +A  AI 
Sbjct:    31 TKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAIS 90

Query:    87 EMDG 90
              M+G
Sbjct:    91 AMNG 94


>TAIR|locus:2088756 [details] [associations]
            symbol:AT3G20930 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0000023 "maltose
            metabolic process" evidence=RCA] [GO:0010027 "thylakoid membrane
            organization" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:Q9V535 eggNOG:COG0724 EMBL:AY099828
            EMBL:AY084565 EMBL:BT002195 IPI:IPI00537313 RefSeq:NP_566672.1
            UniGene:At.43817 ProteinModelPortal:Q8L440 SMR:Q8L440 PRIDE:Q8L440
            EnsemblPlants:AT3G20930.1 GeneID:821642 KEGG:ath:AT3G20930
            TAIR:At3g20930 InParanoid:Q8L440 OMA:KAQMVDH PhylomeDB:Q8L440
            ProtClustDB:CLSN2688611 ArrayExpress:Q8L440 Genevestigator:Q8L440
            Uniprot:Q8L440
        Length = 374

 Score = 174 (66.3 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 32/65 (49%), Positives = 50/65 (76%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFI GLS+ T+E  L+ AF   GE++EVK+I D+++ +S+GY F+++ +E AAG A+KE
Sbjct:   283 KLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKE 342

Query:    88 MDGLV 92
             M+G +
Sbjct:   343 MNGKI 347


>UNIPROTKB|Q43472 [details] [associations]
            symbol:blt801 "Glycine-rich RNA-binding protein blt801"
            species:4513 "Hordeum vulgare" [GO:0003697 "single-stranded DNA
            binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0009409 "response to cold" evidence=IDA] [GO:0009737 "response
            to abscisic acid stimulus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0003697
            EMBL:U49482 PIR:S71453 HSSP:P11940 ProteinModelPortal:Q43472
            Gramene:Q43472 Genevestigator:Q43472 Uniprot:Q43472
        Length = 161

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 31/68 (45%), Positives = 51/68 (75%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   + F+GGL + T++  L++AF ++G++I+ K+I DR TG+SRG+GFV FAS+ A  
Sbjct:     2 ADVEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMR 61

Query:    83 EAIKEMDG 90
             +AI+ M+G
Sbjct:    62 QAIEAMNG 69


>UNIPROTKB|H3BR27 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome,
            N-terminally processed" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL683813 HGNC:HGNC:9910
            ChiTaRS:RBMX SMR:H3BR27 Ensembl:ENST00000464781
            Ensembl:ENST00000568578 Uniprot:H3BR27
        Length = 78

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|K7GKR9 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000035101 Uniprot:K7GKR9
        Length = 196

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|K7GMF5 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000032763 Uniprot:K7GMF5
        Length = 80

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     5 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 64

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    65 KDAARDMNG 73


>UNIPROTKB|K7GNR2 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000034855 Uniprot:K7GNR2
        Length = 129

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|K7GQ39 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000033155 Uniprot:K7GQ39
        Length = 101

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     5 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 64

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    65 KDAARDMNG 73


>TAIR|locus:2007903 [details] [associations]
            symbol:AT1G17640 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K12741 OMA:GHQTGYK IPI:IPI00519530 RefSeq:NP_173208.1
            UniGene:At.51654 ProteinModelPortal:F4I906 SMR:F4I906 PRIDE:F4I906
            EnsemblPlants:AT1G17640.1 GeneID:838341 KEGG:ath:AT1G17640
            Uniprot:F4I906
        Length = 369

 Score = 170 (64.9 bits), Expect = 3.0e-12, P = 3.0e-12
 Identities = 31/82 (37%), Positives = 50/82 (60%)

Query:     6 GSVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTG 65
             G ++  HSV      S  +S  KLF+GG+S++T      + FG+ GE+++  ++ DR+TG
Sbjct:    45 GGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITG 104

Query:    66 QSRGYGFVKFASEAAAGEAIKE 87
               RG+GFV FA  A A + ++E
Sbjct:   105 NPRGFGFVTFADSAVAEKVLEE 126

 Score = 119 (46.9 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query:    23 ANSRT-KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             A S+T K+F+GGL     E  LK+ F  +G+IIE +++ D  TG+SRG+GFV F +E
Sbjct:   152 AVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTE 208


>UNIPROTKB|K7ELT6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000590347 Ensembl:ENST00000591055
            Uniprot:K7ELT6
        Length = 135

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/70 (48%), Positives = 48/70 (68%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDGLV 92
             +A+  M+G V
Sbjct:    62 DAMMAMNGKV 71


>UNIPROTKB|P60826 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:10029 "Cricetulus griseus" [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 EMBL:AY359860 RefSeq:NP_001231002.1
            ProteinModelPortal:P60826 SMR:P60826 PRIDE:P60826 GeneID:100689075
            CTD:1153 Uniprot:P60826
        Length = 172

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|Q83CD7 [details] [associations]
            symbol:CBU_1183 "Glycine-rich RNA-binding protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 29/67 (43%), Positives = 47/67 (70%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             S+ K+++G LSYD     L+  FGQ+GEI E K+I DR TG+S+G+ F+ + ++ AA EA
Sbjct:    16 SQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEA 75

Query:    85 IKEMDGL 91
             + + +G+
Sbjct:    76 VSKANGI 82


>TIGR_CMR|CBU_1183 [details] [associations]
            symbol:CBU_1183 "nucleic acid binding domain protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 29/67 (43%), Positives = 47/67 (70%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             S+ K+++G LSYD     L+  FGQ+GEI E K+I DR TG+S+G+ F+ + ++ AA EA
Sbjct:    16 SQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEA 75

Query:    85 IKEMDGL 91
             + + +G+
Sbjct:    76 VSKANGI 82


>MGI|MGI:893588 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006950 "response to
            stress" evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017148
            "negative regulation of translation" evidence=IDA] [GO:0030371
            "translation repressor activity" evidence=IDA] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=ISO] [GO:0048255 "mRNA stabilization"
            evidence=ISO] [GO:0070181 "SSU rRNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:893588 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OMA:ENRSRGY
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:D78135 EMBL:AK014655
            EMBL:AK132584 EMBL:BC075699 IPI:IPI00121073 RefSeq:NP_031731.1
            UniGene:Mm.17898 ProteinModelPortal:P60824 SMR:P60824 STRING:P60824
            PhosphoSite:P60824 PaxDb:P60824 PRIDE:P60824
            Ensembl:ENSMUST00000105365 GeneID:12696 KEGG:mmu:12696
            UCSC:uc007gce.1 GeneTree:ENSGT00700000104309 InParanoid:P60824
            NextBio:281950 Bgee:P60824 CleanEx:MM_CIRBP Genevestigator:P60824
            GermOnline:ENSMUSG00000045193 Uniprot:P60824
        Length = 172

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>RGD|620756 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO;ISS] [GO:0005634
            "nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009411 "response to UV" evidence=ISO;ISS]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030371 "translation repressor activity" evidence=ISO;ISS]
            [GO:0034063 "stress granule assembly" evidence=ISO;ISS] [GO:0045727
            "positive regulation of translation" evidence=ISO;ISS] [GO:0048255
            "mRNA stabilization" evidence=ISO;ISS] [GO:0070181 "SSU rRNA
            binding" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620756 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0000166 GO:GO:0030371
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
            HOVERGEN:HBG107480 GO:GO:0070181 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309 EMBL:AB000362
            IPI:IPI00201031 UniGene:Rn.28931 ProteinModelPortal:P60825
            SMR:P60825 IntAct:P60825 STRING:P60825 PRIDE:P60825
            Ensembl:ENSRNOT00000021648 UCSC:RGD:620756 InParanoid:P60825
            Genevestigator:P60825 GermOnline:ENSRNOG00000015999 Uniprot:P60825
        Length = 172

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>TAIR|locus:2049359 [details] [associations]
            symbol:GRP7 "AT2G21660" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0009409 "response
            to cold" evidence=IGI;IEP] [GO:0009414 "response to water
            deprivation" evidence=IEP] [GO:0009651 "response to salt stress"
            evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
            evidence=IEP;RCA] [GO:0010501 "RNA secondary structure unwinding"
            evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IDA]
            [GO:0045087 "innate immune response" evidence=IMP;IDA] [GO:0005777
            "peroxisome" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
            evidence=IMP] [GO:0006970 "response to osmotic stress"
            evidence=IMP] [GO:0010119 "regulation of stomatal movement"
            evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA;IMP] [GO:0010043 "response to zinc ion" evidence=IEP]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0006094
            "gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0006833 "water transport" evidence=RCA]
            [GO:0006972 "hyperosmotic response" evidence=RCA] [GO:0007030
            "Golgi organization" evidence=RCA] [GO:0007623 "circadian rhythm"
            evidence=IEP;RCA;TAS] [GO:0009266 "response to temperature
            stimulus" evidence=RCA] [GO:0000380 "alternative mRNA splicing, via
            spliceosome" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0009506 GO:GO:0005634
            GO:GO:0009507 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0005777 GO:GO:0010119 GO:GO:0000166 GO:GO:0010043
            GO:GO:0048046 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003690
            GO:GO:0003697 GO:GO:0006406 GO:GO:0010228 eggNOG:COG0724
            GO:GO:0000380 HOGENOM:HOG000276232 GO:GO:0010501 GO:GO:0032508
            EMBL:AC007119 UniGene:At.22672 UniGene:At.23628 EMBL:Z14987
            EMBL:L00648 EMBL:L04172 EMBL:AF428381 EMBL:AY054284 EMBL:AY042826
            EMBL:AY072523 EMBL:AK318968 EMBL:AY085214 IPI:IPI00523161
            IPI:IPI00542675 PIR:S30147 RefSeq:NP_179760.1 UniGene:At.24279
            UniGene:At.72988 ProteinModelPortal:Q03250 SMR:Q03250 IntAct:Q03250
            MINT:MINT-1163877 STRING:Q03250 PaxDb:Q03250 PRIDE:Q03250
            ProMEX:Q03250 EnsemblPlants:AT2G21660.1 GeneID:816705
            KEGG:ath:AT2G21660 TAIR:At2g21660 InParanoid:Q03250 OMA:SQHEDGH
            ProtClustDB:CLSN2913158 Genevestigator:Q03250 Uniprot:Q03250
        Length = 176

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 30/63 (47%), Positives = 47/63 (74%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             + F+GGL++ T++  L+ AF Q+G++I+ K+I DR TG+SRG+GFV F  E A  +AI+ 
Sbjct:     9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query:    88 MDG 90
             M+G
Sbjct:    69 MNG 71


>ZFIN|ZDB-GENE-030131-5841 [details] [associations]
            symbol:cirbp "cold inducible RNA binding protein"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0009409 "response
            to cold" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-5841 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104309
            EMBL:BX649404 IPI:IPI00758644 PRIDE:F1R6L3
            Ensembl:ENSDART00000105405 ArrayExpress:F1R6L3 Bgee:F1R6L3
            Uniprot:F1R6L3
        Length = 224

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 34/63 (53%), Positives = 45/63 (71%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGGLSYDT E  L++AF ++G I +V VI DR T +SRG+GFV F +   A +A+  
Sbjct:    24 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 83

Query:    88 MDG 90
             M+G
Sbjct:    84 MNG 86


>ASPGD|ASPL0000040642 [details] [associations]
            symbol:AN2989 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001306
            GO:GO:0003676 HOGENOM:HOG000276232 OMA:ISEMDGK
            ProteinModelPortal:C8VIY5 EnsemblFungi:CADANIAT00010091
            Uniprot:C8VIY5
        Length = 128

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 35/78 (44%), Positives = 51/78 (65%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             KLFIGGL++ T + VL++ F ++G I E  V+ DR T +SRG+GFV+FASE  A  A+  
Sbjct:     3 KLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGA 62

Query:    86 ---KEMDGLVCRTSKDTD 100
                +E DG + R  K ++
Sbjct:    63 MNNQEFDGRIIRVDKASE 80


>UNIPROTKB|F2Z2U1 [details] [associations]
            symbol:RBMY1A1 "RNA-binding motif protein, Y chromosome,
            family 1 member E" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC010141 HGNC:HGNC:9912
            HGNC:HGNC:23914 EMBL:AC007322 HGNC:HGNC:23915 HGNC:HGNC:23916
            IPI:IPI00916472 SMR:F2Z2U1 Ensembl:ENST00000358944
            Ensembl:ENST00000361046 Ensembl:ENST00000382639
            Ensembl:ENST00000382653 Uniprot:F2Z2U1
        Length = 81

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|Q96E39 [details] [associations]
            symbol:RBMXL1 "RNA binding motif protein, X-linked-like-1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471097 GO:GO:0030529
            eggNOG:COG0724 EMBL:AL139416 HSSP:Q14103 UniGene:Hs.481898
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 KO:K12885 EMBL:AL832554 EMBL:BC012942 IPI:IPI00061178
            RefSeq:NP_001156008.1 RefSeq:NP_062556.2 ProteinModelPortal:Q96E39
            SMR:Q96E39 IntAct:Q96E39 STRING:Q96E39 PhosphoSite:Q96E39
            PaxDb:Q96E39 PRIDE:Q96E39 Ensembl:ENST00000321792
            Ensembl:ENST00000399794 GeneID:494115 KEGG:hsa:494115
            UCSC:uc001dms.3 CTD:494115 GeneCards:GC01M089446 HGNC:HGNC:25073
            neXtProt:NX_Q96E39 PharmGKB:PA165752300 OMA:STIYVEN
            PhylomeDB:Q96E39 GenomeRNAi:494115 NextBio:255993
            ArrayExpress:Q96E39 Bgee:Q96E39 Uniprot:Q96E39
        Length = 390

 Score = 169 (64.5 bits), Expect = 4.4e-12, P = 4.4e-12
 Identities = 34/69 (49%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV +I DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|H0Y6E7 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome,
            N-terminally processed" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL683813 InterPro:IPR012604
            Pfam:PF08081 HGNC:HGNC:9910 ChiTaRS:RBMX Ensembl:ENST00000419968
            Uniprot:H0Y6E7
        Length = 292

 Score = 165 (63.1 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     5 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 64

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    65 KDAARDMNG 73


>UNIPROTKB|Q3SZN4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 eggNOG:COG0724 GO:GO:0070181 KO:K13195 CTD:1153
            HOGENOM:HOG000276232 OMA:ENRSRGY OrthoDB:EOG4HHP40
            GeneTree:ENSGT00700000104309 EMBL:DAAA02020258 EMBL:BC102773
            IPI:IPI00702406 RefSeq:NP_001029450.1 UniGene:Bt.23273 SMR:Q3SZN4
            Ensembl:ENSBTAT00000004477 GeneID:507120 KEGG:bta:507120
            InParanoid:Q3SZN4 NextBio:20867909 Uniprot:Q3SZN4
        Length = 213

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|E2R6G2 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:E2R6G2 Ensembl:ENSCAFT00000031013 Uniprot:E2R6G2
        Length = 172

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|F6XHA7 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13195 CTD:1153
            OMA:ENRSRGY GeneTree:ENSGT00700000104309 Ensembl:ENSCAFT00000031013
            EMBL:AAEX03012655 RefSeq:XP_868600.1 GeneID:476755 KEGG:cfa:476755
            Uniprot:F6XHA7
        Length = 185

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7EJV5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
        Length = 105

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7ELV6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588344 Uniprot:K7ELV6
        Length = 70

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7EMY9 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000586548 Uniprot:K7EMY9
        Length = 159

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7ENX8 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
        Length = 89

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7EPM4 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585913 Ensembl:ENST00000586636
            Ensembl:ENST00000586773 Ensembl:ENST00000589235
            Ensembl:ENST00000589686 Ensembl:ENST00000591935 Uniprot:K7EPM4
        Length = 168

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7EQR7 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585914 Uniprot:K7EQR7
        Length = 202

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|K7ER40 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000591659 Uniprot:K7ER40
        Length = 174

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|Q14011 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS;IDA] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
            [GO:0030371 "translation repressor activity" evidence=ISS]
            [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0009411
            "response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=IDA] [GO:0009409 "response to cold"
            evidence=TAS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336
            EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 IPI:IPI00641579
            RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S
            PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 IntAct:Q14011
            MINT:MINT-5004534 STRING:Q14011 PhosphoSite:Q14011 DMDM:5921786
            REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011
            DNASU:1153 Ensembl:ENST00000320936 GeneID:1153 KEGG:hsa:1153
            UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649
            neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232
            InParanoid:Q14011 OMA:ENRSRGY OrthoDB:EOG4HHP40 PhylomeDB:Q14011
            ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GenomeRNAi:1153 NextBio:4788
            ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP
            Genevestigator:Q14011 GermOnline:ENSG00000099622 Uniprot:Q14011
        Length = 172

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|F1S6R1 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 GO:GO:0070181 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:CU929580
            Ensembl:ENSSSCT00000014671 Uniprot:F1S6R1
        Length = 172

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|Q5RF83 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278
            RefSeq:NP_001124692.1 UniGene:Pab.19491 ProteinModelPortal:Q5RF83
            SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539
            Uniprot:Q5RF83
        Length = 172

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|H3BT71 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome,
            N-terminally processed" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL683813 InterPro:IPR012604
            Pfam:PF08081 HGNC:HGNC:9910 ChiTaRS:RBMX ProteinModelPortal:H3BT71
            SMR:H3BT71 Ensembl:ENST00000562646 Bgee:H3BT71 Uniprot:H3BT71
        Length = 296

 Score = 165 (63.1 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|K7GRX3 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 InterPro:IPR012604
            Pfam:PF08081 EMBL:FP102148 Ensembl:ENSSSCT00000035747
            Uniprot:K7GRX3
        Length = 306

 Score = 165 (63.1 bits), Expect = 5.9e-12, P = 5.9e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>TAIR|locus:2079276 [details] [associations]
            symbol:ATRZ-1A species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA;IDA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0009409 "response to cold" evidence=IMP] [GO:0009631 "cold
            acclimation" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
            PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005829
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0009631
            GO:GO:0003676 Gene3D:4.10.60.10 EMBL:AP001298 HOGENOM:HOG000276232
            UniGene:At.48707 HSSP:Q61474 KO:K12885 EMBL:AY054613 EMBL:AF424613
            EMBL:AY072457 EMBL:AK221725 EMBL:AK227088 IPI:IPI00530350
            RefSeq:NP_189273.1 ProteinModelPortal:Q9LIN3 SMR:Q9LIN3
            IntAct:Q9LIN3 STRING:Q9LIN3 PRIDE:Q9LIN3 EnsemblPlants:AT3G26420.1
            GeneID:822246 KEGG:ath:AT3G26420 TAIR:At3g26420 InParanoid:Q9LIN3
            OMA:SSKDDRY PhylomeDB:Q9LIN3 ProtClustDB:CLSN2723027
            Genevestigator:Q9LIN3 Uniprot:Q9LIN3
        Length = 245

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 28/64 (43%), Positives = 47/64 (73%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             + FIGGL++ T++  L+DAF ++G ++E KV+ D+ +G+SRG+GF+ F  + A  EAI  
Sbjct:     8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67

Query:    88 MDGL 91
             M+G+
Sbjct:    68 MNGM 71


>TAIR|locus:2136298 [details] [associations]
            symbol:CCR1 "cold, circadian rhythm, and RNA binding 1"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0005618 "cell wall" evidence=IDA]
            [GO:0045087 "innate immune response" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009651 "response to salt
            stress" evidence=IEP] [GO:0005777 "peroxisome" evidence=IDA]
            [GO:0010043 "response to zinc ion" evidence=IEP] [GO:0009737
            "response to abscisic acid stimulus" evidence=IDA] [GO:0005829
            "cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
            [GO:0048046 "apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0007623 "circadian rhythm" evidence=RCA]
            [GO:0000380 "alternative mRNA splicing, via spliceosome"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005886 GO:GO:0009506
            GO:GO:0009737 GO:GO:0005794 GO:GO:0005618 GO:GO:0009507
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0005777
            GO:GO:0000166 GO:GO:0010043 GO:GO:0048046 GO:GO:0009651
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0003723
            EMBL:AL161594 eggNOG:COG0724 EMBL:AL050351 GO:GO:0000380
            HOGENOM:HOG000276232 UniGene:At.23968 ProtClustDB:CLSN2913158
            EMBL:Z14988 EMBL:L00649 EMBL:L04171 EMBL:AY034997 EMBL:AY063005
            IPI:IPI00520057 IPI:IPI00526742 PIR:S30148 RefSeq:NP_195637.1
            ProteinModelPortal:Q03251 SMR:Q03251 MINT:MINT-1163792
            STRING:Q03251 PaxDb:Q03251 PRIDE:Q03251 ProMEX:Q03251
            EnsemblPlants:AT4G39260.1 GeneID:830082 KEGG:ath:AT4G39260
            TAIR:At4g39260 InParanoid:Q03251 OMA:GNNSGGY Genevestigator:Q03251
            Uniprot:Q03251
        Length = 169

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 30/63 (47%), Positives = 46/63 (73%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             + F+GGL++ TN+  L+  F Q G++I+ K+I DR +G+SRG+GFV F  E A  +AI+E
Sbjct:     7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>TAIR|locus:2160752 [details] [associations]
            symbol:AT5G06210 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 EMBL:AP002544 HOGENOM:HOG000276232
            HSSP:Q61474 EMBL:AY062714 EMBL:AY093349 EMBL:AY087577
            IPI:IPI00530408 RefSeq:NP_196239.1 UniGene:At.27256
            ProteinModelPortal:Q9FFZ6 SMR:Q9FFZ6 STRING:Q9FFZ6 PaxDb:Q9FFZ6
            PRIDE:Q9FFZ6 EnsemblPlants:AT5G06210.1 GeneID:830508
            KEGG:ath:AT5G06210 TAIR:At5g06210 InParanoid:Q9FFZ6 OMA:SDRSKGF
            PhylomeDB:Q9FFZ6 ProtClustDB:CLSN2686837 ArrayExpress:Q9FFZ6
            Genevestigator:Q9FFZ6 Uniprot:Q9FFZ6
        Length = 146

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 30/64 (46%), Positives = 47/64 (73%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             +KLFIGGLS+ T E  L +AF + G+++E +++ DRV+ +S+G+GFV FAS   A +A+ 
Sbjct:    34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALM 93

Query:    87 EMDG 90
             E +G
Sbjct:    94 EFNG 97


>UNIPROTKB|B4E2X2 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC004221 HOVERGEN:HBG107480 EMBL:AC004258 UniGene:Hs.618145
            UniGene:Hs.634522 HGNC:HGNC:1982 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:AK304470 IPI:IPI00909097
            SMR:B4E2X2 STRING:B4E2X2 Ensembl:ENST00000413636 UCSC:uc010xgl.1
            Uniprot:B4E2X2
        Length = 263

 Score = 162 (62.1 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>TAIR|locus:2077392 [details] [associations]
            symbol:AT3G07810 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 IPI:IPI00546643 RefSeq:NP_850539.1 UniGene:At.19375
            ProteinModelPortal:F4JFN7 SMR:F4JFN7 PRIDE:F4JFN7
            EnsemblPlants:AT3G07810.2 GeneID:819972 KEGG:ath:AT3G07810
            OMA:YYIGNTN Uniprot:F4JFN7
        Length = 495

 Score = 169 (64.5 bits), Expect = 7.2e-12, P = 7.2e-12
 Identities = 36/73 (49%), Positives = 47/73 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGG+S+DTNE  LK+ F   GE+IE  ++ DR TG++RG+GFV FA  A A   I E
Sbjct:     7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66

Query:    88 ---MDGLVCRTSK 97
                +DG +    K
Sbjct:    67 KHNIDGRLVEAKK 79

 Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query:    26 RT-KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             RT K+F+GGL     E+  K  F Q G   +V V+ D  T + RG+GF+ + SE A  + 
Sbjct:   106 RTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165

Query:    85 I 85
             +
Sbjct:   166 L 166


>UNIPROTKB|Q9DED4 [details] [associations]
            symbol:cirbp-b "Cold-inducible RNA-binding protein B"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007369
            "gastrulation" evidence=IMP] [GO:0009409 "response to cold"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0019899 "enzyme
            binding" evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=IGI;IMP] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0060212 "negative
            regulation of nuclear-transcribed mRNA poly(A) tail shortening"
            evidence=IMP] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480 GO:GO:0060212
            EMBL:AB044535 EMBL:BC054250 RefSeq:NP_001079794.1 UniGene:Xl.8151
            HSSP:P09651 ProteinModelPortal:Q9DED4 SMR:Q9DED4 MINT:MINT-274223
            PRIDE:Q9DED4 GeneID:379484 KEGG:xla:379484 CTD:379484
            Xenbase:XB-GENE-492785 KO:K13195 Uniprot:Q9DED4
        Length = 166

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGGL++DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A +A+  
Sbjct:     6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65

Query:    88 MDG 90
             M+G
Sbjct:    66 MNG 68


>UNIPROTKB|D6W5Y5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471139 EMBL:AC004221 EMBL:AC004258 IPI:IPI00641579
            UniGene:Hs.618145 UniGene:Hs.634522 HGNC:HGNC:1982
            HOGENOM:HOG000276232 ChiTaRS:CIRBP ProteinModelPortal:D6W5Y5
            PRIDE:D6W5Y5 Ensembl:ENST00000587323 Ensembl:ENST00000587896
            Ensembl:ENST00000588230 Ensembl:ENST00000589710 ArrayExpress:D6W5Y5
            Bgee:D6W5Y5 Uniprot:D6W5Y5
        Length = 297

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/68 (48%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+   KLF+GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A 
Sbjct:     2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query:    83 EAIKEMDG 90
             +A+  M+G
Sbjct:    62 DAMMAMNG 69


>UNIPROTKB|F1NZD3 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0070062 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0006366 GO:GO:0006509 GO:GO:0005719 GO:GO:0071347
            GO:GO:0071013 GO:GO:0000381 GeneTree:ENSGT00700000104336
            InterPro:IPR012604 Pfam:PF08081 OMA:PFFKGMS EMBL:AADN02013316
            EMBL:AADN02013317 IPI:IPI00575141 Ensembl:ENSGALT00000010428
            Uniprot:F1NZD3
        Length = 385

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|F1RQ90 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071347 "cellular response to interleukin-1"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0070062 "extracellular vesicular exosome"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044530
            "supraspliceosomal complex" evidence=IEA] [GO:0006509 "membrane
            protein ectodomain proteolysis" evidence=IEA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003729 "mRNA
            binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0001047 "core promoter binding" evidence=IEA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0070062
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006366 GO:GO:0006509
            GO:GO:0005719 GO:GO:0071347 GO:GO:0071013 GO:GO:0000381
            GeneTree:ENSGT00700000104336 InterPro:IPR012604 Pfam:PF08081
            CTD:27316 KO:K12885 OMA:PFFKGMS EMBL:FP102148 RefSeq:NP_001231025.1
            UniGene:Ssc.97220 Ensembl:ENSSSCT00000013889
            Ensembl:ENSSSCT00000034598 GeneID:100158042 KEGG:ssc:100158042
            Uniprot:F1RQ90
        Length = 390

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>RGD|1565256 [details] [associations]
            symbol:Rbmx "RNA binding motif protein, X-linked" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISO] [GO:0001047 "core promoter binding"
            evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003727
            "single-stranded RNA binding" evidence=IDA] [GO:0003729 "mRNA
            binding" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005681 "spliceosomal
            complex" evidence=IDA] [GO:0005719 "nuclear euchromatin"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0006376 "mRNA splice site selection"
            evidence=IMP] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=ISO] [GO:0044530 "supraspliceosomal complex" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0070062
            "extracellular vesicular exosome" evidence=ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] [GO:0071347 "cellular
            response to interleukin-1" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1565256 GO:GO:0045893 GO:GO:0000166 GO:GO:0003727
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0005681 eggNOG:COG0724
            GO:GO:0006376 EMBL:CH474106 GeneTree:ENSGT00700000104336
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 CTD:27316 KO:K12885 OMA:PFFKGMS OrthoDB:EOG4CNQSK
            EMBL:BC097479 IPI:IPI00370207 RefSeq:NP_001020834.1
            UniGene:Rn.229269 ProteinModelPortal:Q4V898 SMR:Q4V898
            STRING:Q4V898 PhosphoSite:Q4V898 PRIDE:Q4V898
            Ensembl:ENSRNOT00000001154 GeneID:302855 KEGG:rno:302855
            InParanoid:Q4V898 NextBio:650249 Genevestigator:Q4V898
            Uniprot:Q4V898
        Length = 390

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|D3JUI8 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome,
            N-terminally processed" species:9913 "Bos taurus" [GO:0071347
            "cellular response to interleukin-1" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] [GO:0070062
            "extracellular vesicular exosome" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0044530 "supraspliceosomal complex"
            evidence=IEA] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0005719 "nuclear euchromatin"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0001047 "core promoter
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104336
            HOGENOM:HOG000276235 InterPro:IPR012604 Pfam:PF08081 CTD:27316
            KO:K12885 OMA:PFFKGMS OrthoDB:EOG4CNQSK EMBL:DAAA02067753
            EMBL:GU304600 IPI:IPI00706784 RefSeq:NP_001165510.1 UniGene:Bt.7342
            Ensembl:ENSBTAT00000017696 GeneID:509591 KEGG:bta:509591
            NextBio:20869035 Uniprot:D3JUI8
        Length = 391

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|P38159 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
            [GO:0044530 "supraspliceosomal complex" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0001047 "core promoter binding"
            evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=IDA] [GO:0071347 "cellular response to interleukin-1"
            evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
            evidence=IDA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IDA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0006366 "transcription from
            RNA polymerase II promoter" evidence=IDA] [GO:0005719 "nuclear
            euchromatin" evidence=IDA] [GO:0048026 "positive regulation of mRNA
            splicing, via spliceosome" evidence=ISS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] Reactome:REACT_71
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005654 GO:GO:0000166 GO:GO:0070062
            GO:GO:0051260 Reactome:REACT_1675 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0045944 GO:GO:0003682 GO:GO:0006366 GO:GO:0006509
            GO:GO:0001047 GO:GO:0005719 GO:GO:0071347 GO:GO:0000398
            GO:GO:0071013 EMBL:AL683813 EMBL:CH471150 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0048026 GO:GO:0000381 GO:GO:0044530
            HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081 CTD:27316
            KO:K12885 OMA:PFFKGMS OrthoDB:EOG4CNQSK EMBL:Z23064 EMBL:AF266723
            EMBL:AF266720 EMBL:AF266721 EMBL:AF266722 EMBL:AY464692
            EMBL:AK096015 EMBL:AK304868 EMBL:BC006550 EMBL:BC007435
            IPI:IPI00304692 IPI:IPI00552938 RefSeq:NP_001158275.1
            RefSeq:NP_002130.2 UniGene:Hs.380118 UniGene:Hs.710162
            ProteinModelPortal:P38159 SMR:P38159 DIP:DIP-34447N IntAct:P38159
            MINT:MINT-5000999 STRING:P38159 PhosphoSite:P38159 DMDM:23503093
            SWISS-2DPAGE:P38159 PaxDb:P38159 PRIDE:P38159 DNASU:27316
            Ensembl:ENST00000320676 Ensembl:ENST00000431446 GeneID:27316
            KEGG:hsa:27316 UCSC:uc004fad.1 GeneCards:GC0XM135951 HGNC:HGNC:9910
            MIM:300199 neXtProt:NX_P38159 PharmGKB:PA34277 HOGENOM:HOG000070250
            InParanoid:P38159 PhylomeDB:P38159 ChiTaRS:RBMX GenomeRNAi:27316
            NextBio:50322 ArrayExpress:P38159 Bgee:P38159 CleanEx:HS_RBMX
            Genevestigator:P38159 GermOnline:ENSG00000147274 Uniprot:P38159
        Length = 391

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|A5A6M3 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome"
            species:9598 "Pan troglodytes" [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005719 "nuclear euchromatin"
            evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=ISS] [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048025
            "negative regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0070062 "extracellular
            vesicular exosome" evidence=ISS] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISS] [GO:0071347 "cellular response to
            interleukin-1" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008380
            GO:GO:0000166 GO:GO:0070062 GO:GO:0051260 GO:GO:0003729
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003682
            GO:GO:0006366 GO:GO:0006509 GO:GO:0001047 GO:GO:0005719
            GO:GO:0071347 GO:GO:0071013 GO:GO:0048025 eggNOG:COG0724
            GO:GO:0048026 GO:GO:0000381 GO:GO:0044530 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081 CTD:27316
            KO:K12885 EMBL:AB222151 RefSeq:NP_001128678.1 UniGene:Ptr.2579
            ProteinModelPortal:A5A6M3 SMR:A5A6M3 PRIDE:A5A6M3 GeneID:738482
            KEGG:ptr:738482 NextBio:20905775 Uniprot:A5A6M3
        Length = 391

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|Q4R7F0 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome"
            species:9541 "Macaca fascicularis" [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005719 "nuclear euchromatin"
            evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=ISS] [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048025
            "negative regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0070062 "extracellular
            vesicular exosome" evidence=ISS] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISS] [GO:0071347 "cellular response to
            interleukin-1" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008380
            GO:GO:0000166 GO:GO:0070062 GO:GO:0051260 GO:GO:0003729
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003682
            GO:GO:0006366 GO:GO:0006509 GO:GO:0001047 GO:GO:0005719
            GO:GO:0071347 GO:GO:0071013 GO:GO:0048025 GO:GO:0048026
            GO:GO:0000381 GO:GO:0044530 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 EMBL:AB168869 ProteinModelPortal:Q4R7F0 SMR:Q4R7F0
            Uniprot:Q4R7F0
        Length = 391

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>MGI|MGI:1343044 [details] [associations]
            symbol:Rbmx "RNA binding motif protein, X chromosome"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0001047 "core promoter binding"
            evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=ISO] [GO:0003727 "single-stranded RNA binding"
            evidence=ISO] [GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex"
            evidence=ISO] [GO:0005719 "nuclear euchromatin" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0006376 "mRNA splice site selection"
            evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0006509 "membrane protein ectodomain proteolysis" evidence=ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0044530
            "supraspliceosomal complex" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0070062 "extracellular
            vesicular exosome" evidence=ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] [GO:0071347 "cellular response to
            interleukin-1" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1343044
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0006351 GO:GO:0005681 GO:GO:0003723 eggNOG:COG0724
            EMBL:CH466583 HSSP:Q61474 GeneTree:ENSGT00700000104336
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 CTD:27316 KO:K12885 ChiTaRS:RBMX EMBL:AJ237846
            EMBL:AJ237847 EMBL:AK087940 EMBL:AK135164 EMBL:AK165006
            EMBL:AL672106 EMBL:BC003710 IPI:IPI00124979 RefSeq:NP_001160095.1
            RefSeq:NP_035382.1 UniGene:Mm.28275 ProteinModelPortal:Q9WV02
            SMR:Q9WV02 IntAct:Q9WV02 STRING:Q9WV02 PhosphoSite:Q9WV02
            PRIDE:Q9WV02 Ensembl:ENSMUST00000114726 Ensembl:ENSMUST00000114730
            Ensembl:ENSMUST00000140384 GeneID:19655 KEGG:mmu:19655
            UCSC:uc009thi.2 InParanoid:Q9R0Y0 NextBio:296930 Bgee:Q9WV02
            Genevestigator:Q9WV02 Uniprot:Q9WV02
        Length = 391

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|E2R068 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104336 InterPro:IPR012604 Pfam:PF08081
            OMA:PFFKGMS EMBL:AAEX03026954 Ensembl:ENSCAFT00000030124
            Uniprot:E2R068
        Length = 392

 Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 33/69 (47%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     4 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 63

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    64 KDAARDMNG 72


>MGI|MGI:1343045 [details] [associations]
            symbol:Rbmxl1 "RNA binding motif protein, X linked-like-1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0001047 "core promoter binding"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003723 "RNA
            binding" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006376 "mRNA splice site
            selection" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0044530
            "supraspliceosomal complex" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP;IDA] [GO:0048025 "negative regulation of mRNA
            splicing, via spliceosome" evidence=ISO] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=ISO]
            [GO:0051260 "protein homooligomerization" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1343045 GO:GO:0008380 GO:GO:0000166
            GO:GO:0070062 GO:GO:0051260 GO:GO:0003729 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0003682 GO:GO:0006366
            GO:GO:0006509 GO:GO:0001047 GO:GO:0005719 GO:GO:0071347
            GO:GO:0071013 GO:GO:0048025 eggNOG:COG0724 GO:GO:0048026
            GO:GO:0000381 GO:GO:0044530 HSSP:Q61474
            GeneTree:ENSGT00700000104336 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081 KO:K12885
            CTD:494115 EMBL:AF031568 EMBL:AK041927 EMBL:BC011441 EMBL:BC089350
            IPI:IPI00663587 RefSeq:NP_001239018.1 RefSeq:NP_033059.2
            UniGene:Mm.24718 ProteinModelPortal:Q91VM5 SMR:Q91VM5 IntAct:Q91VM5
            STRING:Q91VM5 PhosphoSite:Q91VM5 PaxDb:Q91VM5 PRIDE:Q91VM5
            Ensembl:ENSMUST00000049245 GeneID:19656 KEGG:mmu:19656
            UCSC:uc009mhz.1 InParanoid:Q91VM5 OMA:ILLMKDR OrthoDB:EOG4001KF
            NextBio:296934 Bgee:Q91VM5 Genevestigator:Q91VM5 Uniprot:Q91VM5
        Length = 388

 Score = 164 (62.8 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 32/69 (46%), Positives = 49/69 (71%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+E+ ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A ++M+G
Sbjct:    63 KDAARDMNG 71


>UNIPROTKB|A6QPJ1 [details] [associations]
            symbol:RBM24 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0010830 "regulation of myotube differentiation" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            HOGENOM:HOG000276232 GO:GO:0010830 HOVERGEN:HBG108399 CTD:221662
            GeneTree:ENSGT00390000002308 OMA:LQADRMQ eggNOG:NOG248750
            EMBL:DAAA02055633 EMBL:BC149345 IPI:IPI00711385
            RefSeq:NP_001098455.1 UniGene:Bt.111570 SMR:A6QPJ1
            Ensembl:ENSBTAT00000038477 GeneID:524220 KEGG:bta:524220
            NextBio:20873922 Uniprot:A6QPJ1
        Length = 236

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/66 (50%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   GEI E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|Q9BX46 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003730
            "mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 eggNOG:COG0724
            HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            CTD:221662 EMBL:AK055391 EMBL:AK095016 EMBL:AY547318 EMBL:AL136305
            EMBL:BC104810 EMBL:BC104808 IPI:IPI00411370 IPI:IPI00827745
            RefSeq:NP_001137413.1 RefSeq:NP_001137414.1 RefSeq:NP_694565.1
            UniGene:Hs.741190 ProteinModelPortal:Q9BX46 SMR:Q9BX46
            IntAct:Q9BX46 MINT:MINT-2879164 STRING:Q9BX46 PhosphoSite:Q9BX46
            DMDM:74761312 PRIDE:Q9BX46 Ensembl:ENST00000318204
            Ensembl:ENST00000379052 GeneID:221662 KEGG:hsa:221662
            UCSC:uc003nbz.4 UCSC:uc003nca.3 GeneCards:GC06P017281
            HGNC:HGNC:21539 neXtProt:NX_Q9BX46 PharmGKB:PA134964569
            InParanoid:Q9BX46 OMA:LQADRMQ OrthoDB:EOG4DV5NS PhylomeDB:Q9BX46
            GenomeRNAi:221662 NextBio:91409 ArrayExpress:Q9BX46 Bgee:Q9BX46
            CleanEx:HS_RBM24 Genevestigator:Q9BX46 Uniprot:Q9BX46
        Length = 236

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 33/66 (50%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   GEI E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|F1RUJ2 [details] [associations]
            symbol:RBM24 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0010830 "regulation of myotube differentiation" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 GeneTree:ENSGT00390000002308 OMA:LQADRMQ
            EMBL:CU466948 Ensembl:ENSSSCT00000001161 Uniprot:F1RUJ2
        Length = 254

 Score = 157 (60.3 bits), Expect = 2.1e-11, P = 2.1e-11
 Identities = 33/66 (50%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   GEI E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    29 TKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 88

Query:    87 EMDGLV 92
             + + ++
Sbjct:    89 DPNPII 94


>ZFIN|ZDB-GENE-040628-1 [details] [associations]
            symbol:rbm24a "RNA binding motif protein 24a"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003228
            "atrial cardiac muscle tissue development" evidence=IMP]
            [GO:0072358 "cardiovascular system development" evidence=IGI]
            [GO:0001947 "heart looping" evidence=IMP] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040628-1 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 GO:GO:0001947 GO:GO:0043488 eggNOG:COG0724
            HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            EMBL:AB080735 IPI:IPI00506301 RefSeq:NP_998030.1 UniGene:Dr.159425
            ProteinModelPortal:Q76LC6 SMR:Q76LC6 STRING:Q76LC6
            Ensembl:ENSDART00000110862 GeneID:405801 KEGG:dre:405801 CTD:405801
            GeneTree:ENSGT00390000002308 OrthoDB:EOG4KWJVF NextBio:20817766
            ArrayExpress:Q76LC6 Bgee:Q76LC6 GO:GO:0003228 Uniprot:Q76LC6
        Length = 230

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   GEI E  VI DR TG+SRGYGFV  A  +AA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>TAIR|locus:2036520 [details] [associations]
            symbol:AtRZ-1b "AtRZ-1b" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA;IDA] [GO:0003723
            "RNA binding" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009409
            "response to cold" evidence=IGI;IEP] [GO:0009414 "response to water
            deprivation" evidence=IEP] [GO:0009651 "response to salt stress"
            evidence=IEP] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
            PROSITE:PS50158 SMART:SM00343 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
            GO:GO:0009409 GO:GO:0009414 GO:GO:0008270 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AC002292 Gene3D:4.10.60.10 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q61474 KO:K12885 EMBL:AY088195
            EMBL:BT002328 EMBL:AK221863 IPI:IPI00521762 PIR:G96631
            RefSeq:NP_564759.1 RefSeq:NP_849832.1 UniGene:At.19208
            UniGene:At.26558 ProteinModelPortal:O22703 SMR:O22703 IntAct:O22703
            PaxDb:O22703 PRIDE:O22703 EnsemblPlants:AT1G60650.1
            EnsemblPlants:AT1G60650.2 GeneID:842359 KEGG:ath:AT1G60650
            TAIR:At1g60650 InParanoid:O22703 OMA:HHLENEY PhylomeDB:O22703
            ProtClustDB:CLSN2718554 Genevestigator:O22703 Uniprot:O22703
        Length = 292

 Score = 159 (61.0 bits), Expect = 2.4e-11, P = 2.4e-11
 Identities = 28/70 (40%), Positives = 45/70 (64%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             +D N  +++F+GGLS+D  E  L+  F ++G+I E +++  R TG+ RG+GF+ F     
Sbjct:     6 NDGNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRG 65

Query:    81 AGEAIKEMDG 90
             A +AIK M G
Sbjct:    66 ADDAIKHMHG 75


>UNIPROTKB|Q5ZJX4 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 GO:GO:0030154
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HOGENOM:HOG000276232 HSSP:Q9H0Z9 HOVERGEN:HBG108399
            OrthoDB:EOG4DV5NS eggNOG:NOG248750 EMBL:AJ720310 IPI:IPI00586902
            UniGene:Gga.5690 ProteinModelPortal:Q5ZJX4 SMR:Q5ZJX4
            InParanoid:Q5ZJX4 Uniprot:Q5ZJX4
        Length = 215

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|Q5ZMA3 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488
            "regulation of mRNA stability" evidence=ISS] [GO:0010830
            "regulation of myotube differentiation" evidence=ISS] [GO:0003730
            "mRNA 3'-UTR binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 eggNOG:COG0724
            GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399 EMBL:AJ719481
            IPI:IPI00971402 RefSeq:NP_001012881.1 UniGene:Gga.39322
            ProteinModelPortal:Q5ZMA3 SMR:Q5ZMA3 STRING:Q5ZMA3 GeneID:420846
            KEGG:gga:420846 CTD:221662 NextBio:20823702 Uniprot:Q5ZMA3
        Length = 225

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|O93235 [details] [associations]
            symbol:cirbp-a "Cold-inducible RNA-binding protein A"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=IMP] [GO:0009409
            "response to cold" evidence=IEP] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0016477
            "cell migration" evidence=IMP] [GO:0017148 "negative regulation of
            translation" evidence=ISS] [GO:0019899 "enzyme binding"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0030371
            "translation repressor activity" evidence=ISS] [GO:0034063 "stress
            granule assembly" evidence=ISS] [GO:0045727 "positive regulation of
            translation" evidence=ISS] [GO:0048255 "mRNA stabilization"
            evidence=ISS] [GO:0048793 "pronephros development"
            evidence=IEP;IMP] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0070181 "SSU rRNA binding" evidence=ISS] [GO:0072004 "kidney
            field specification" evidence=IMP] [GO:0005840 "ribosome"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0016477 GO:GO:0022008 GO:GO:0000166
            GO:GO:0030371 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0019899
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0007369
            GO:GO:0010494 GO:GO:0034063 GO:GO:0048793 EMBL:AB007597
            EMBL:AF278702 EMBL:BC041204 RefSeq:NP_001080069.1 UniGene:Xl.4515
            ProteinModelPortal:O93235 SMR:O93235 GeneID:379761 KEGG:xla:379761
            CTD:379761 Xenbase:XB-GENE-6256647 HOVERGEN:HBG107480 GO:GO:0070181
            GO:GO:0072004 GO:GO:0060212 Uniprot:O93235
        Length = 166

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/63 (50%), Positives = 45/63 (71%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGGL+++TNE  L+ AF ++G I EV V+ DR T +SRG+GFV F +   A +A+  
Sbjct:     6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65

Query:    88 MDG 90
             M+G
Sbjct:    66 MNG 68


>UNIPROTKB|Q6GQD3 [details] [associations]
            symbol:rbm24-a "RNA-binding protein 24-A" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0010830 "regulation of myotube differentiation" evidence=IMP]
            [GO:0043488 "regulation of mRNA stability" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 EMBL:AF223427 EMBL:BC072812 RefSeq:NP_001080995.1
            UniGene:Xl.12316 HSSP:Q9H0Z9 ProteinModelPortal:Q6GQD3 SMR:Q6GQD3
            GeneID:394318 KEGG:xla:394318 CTD:394318 Xenbase:XB-GENE-866276
            HOVERGEN:HBG108399 Uniprot:Q6GQD3
        Length = 225

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|Q6P8A7 [details] [associations]
            symbol:rbm24 "RNA-binding protein 24" species:8364 "Xenopus
            (Silurana) tropicalis" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
            evidence=ISS] [GO:0043488 "regulation of mRNA stability"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730
            GO:GO:0043488 HOGENOM:HOG000276232 GO:GO:0010830 HSSP:Q9H0Z9
            HOVERGEN:HBG108399 CTD:221662 OrthoDB:EOG4DV5NS EMBL:BC061322
            RefSeq:NP_989016.1 UniGene:Str.6492 ProteinModelPortal:Q6P8A7
            SMR:Q6P8A7 STRING:Q6P8A7 GeneID:394612 KEGG:xtr:394612
            Xenbase:XB-GENE-493647 eggNOG:NOG248750 InParanoid:Q6P8A7
            Bgee:Q6P8A7 Uniprot:Q6P8A7
        Length = 226

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|Q9I8B3 [details] [associations]
            symbol:rbm24-b "RNA-binding protein 24-B" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0010830 "regulation of myotube differentiation" evidence=ISS]
            [GO:0043488 "regulation of mRNA stability" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488
            GO:GO:0010830 HSSP:Q9H0Z9 HOVERGEN:HBG108399 EMBL:AJ271404
            EMBL:BC044956 RefSeq:NP_001079578.1 UniGene:Xl.467
            ProteinModelPortal:Q9I8B3 SMR:Q9I8B3 GeneID:379265 KEGG:xla:379265
            CTD:379265 Xenbase:XB-GENE-6256347 Uniprot:Q9I8B3
        Length = 224

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>MGI|MGI:1889294 [details] [associations]
            symbol:Rbm38 "RNA binding motif protein 38" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IMP]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0006977 "DNA damage response, signal transduction
            by p53 class mediator resulting in cell cycle arrest" evidence=ISO]
            [GO:0006978 "DNA damage response, signal transduction by p53 class
            mediator resulting in transcription of p21 class mediator"
            evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007050
            "cell cycle arrest" evidence=ISO] [GO:0008285 "negative regulation
            of cell proliferation" evidence=ISO] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IDA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1889294 GO:GO:0005829 GO:GO:0005634
            GO:GO:0008285 GO:GO:0030154 GO:GO:0006977 GO:GO:0008380
            GO:GO:0000166 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0007050 EMBL:CH466551 GO:GO:0003730 GO:GO:0043484
            GO:GO:0006978 HOGENOM:HOG000276232 GO:GO:0070935 EMBL:AL928599
            GO:GO:0010830 HOVERGEN:HBG108399 GeneTree:ENSGT00390000002308
            OrthoDB:EOG4DV5NS eggNOG:NOG248750 CTD:55544 OMA:VGYGYPA
            EMBL:X75316 EMBL:AK146026 EMBL:AK162141 EMBL:AK172625 EMBL:BC085307
            IPI:IPI00122313 PIR:S38384 RefSeq:NP_062420.2 UniGene:Mm.485782
            ProteinModelPortal:Q62176 SMR:Q62176 STRING:Q62176
            PhosphoSite:Q62176 PaxDb:Q62176 PRIDE:Q62176
            Ensembl:ENSMUST00000029014 Ensembl:ENSMUST00000173393 GeneID:56190
            KEGG:mmu:56190 UCSC:uc008odh.1 InParanoid:Q5U418 ChiTaRS:RBM38
            NextBio:311992 Bgee:Q62176 CleanEx:MM_RBM38 Genevestigator:Q62176
            GermOnline:ENSMUSG00000027510 Uniprot:Q62176
        Length = 237

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    32 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACK 91

Query:    87 EMDGLV 92
             + + ++
Sbjct:    92 DPNPII 97


>RGD|1308503 [details] [associations]
            symbol:Rbm38 "RNA binding motif protein 38" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0006977 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in cell cycle arrest" evidence=IEA] [GO:0006978 "DNA
            damage response, signal transduction by p53 class mediator
            resulting in transcription of p21 class mediator" evidence=IEA]
            [GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0008285 "negative
            regulation of cell proliferation" evidence=IEA] [GO:0010830
            "regulation of myotube differentiation" evidence=IEA] [GO:0043484
            "regulation of RNA splicing" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1308503 GO:GO:0008285 GO:GO:0006977 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007050 GO:GO:0003730 GO:GO:0043484
            GO:GO:0006978 GO:GO:0070935 GO:GO:0010830 EMBL:CH474062
            GeneTree:ENSGT00390000002308 OrthoDB:EOG4DV5NS OMA:VGYGYPA
            IPI:IPI00190605 UniGene:Rn.17628 Ensembl:ENSRNOT00000008764
            Uniprot:D3ZGE9
        Length = 237

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    32 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACK 91

Query:    87 EMDGLV 92
             + + ++
Sbjct:    92 DPNPII 97


>UNIPROTKB|B7ZMD9 [details] [associations]
            symbol:RBMY1D "RNA-binding motif protein, Y chromosome,
            family 1 member D" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG063314
            InterPro:IPR012604 Pfam:PF08081 UniGene:Hs.380450 EMBL:AC007322
            HGNC:HGNC:23915 EMBL:BC136862 EMBL:BC144459 IPI:IPI00945061
            SMR:B7ZMD9 Ensembl:ENST00000418956 UCSC:uc010nxb.2 Uniprot:B7ZMD9
        Length = 459

 Score = 163 (62.4 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|J3KPK3 [details] [associations]
            symbol:RBMY1E "RNA-binding motif protein, Y chromosome,
            family 1 member E" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012604 Pfam:PF08081
            EMBL:AC007322 HGNC:HGNC:23916 ProteinModelPortal:J3KPK3
            Ensembl:ENST00000382658 Uniprot:J3KPK3
        Length = 459

 Score = 163 (62.4 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|J3KQ82 [details] [associations]
            symbol:RBMY1J "RNA-binding motif protein, Y chromosome,
            family 1 member F/J" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012604 Pfam:PF08081
            EMBL:AC023342 EMBL:AC007320 HGNC:HGNC:23974 HGNC:HGNC:23917
            ProteinModelPortal:J3KQ82 Ensembl:ENST00000445779
            Ensembl:ENST00000454978 Uniprot:J3KQ82
        Length = 459

 Score = 163 (62.4 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|E1BZ17 [details] [associations]
            symbol:RBM24 "RNA-binding protein 24" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0010830 "regulation of
            myotube differentiation" evidence=IEA] [GO:0043488 "regulation of
            mRNA stability" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0043488 GO:GO:0010830
            GeneTree:ENSGT00390000002308 EMBL:AADN02027548 EMBL:AADN02027547
            IPI:IPI00580084 ProteinModelPortal:E1BZ17
            Ensembl:ENSGALT00000020752 OMA:ILHRSCL Uniprot:E1BZ17
        Length = 245

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>ZFIN|ZDB-GENE-060312-43 [details] [associations]
            symbol:rbm24b "RNA binding motif protein 24b"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0001947 "heart
            looping" evidence=IMP] [GO:0072358 "cardiovascular system
            development" evidence=IGI] [GO:0003228 "atrial cardiac muscle
            tissue development" evidence=IMP] [GO:0003229 "ventricular cardiac
            muscle tissue development" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-060312-43 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0001947 GO:GO:0003229
            GeneTree:ENSGT00390000002308 GO:GO:0003228 EMBL:CT027645
            IPI:IPI00898048 ProteinModelPortal:E9QCG4
            Ensembl:ENSDART00000127556 Bgee:E9QCG4 Uniprot:E9QCG4
        Length = 245

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/66 (48%), Positives = 43/66 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T ++ L+  F   GEI E  VI DR TG+SRGYGFV  A  +AA  A K
Sbjct:    11 TKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|A6NDE4 [details] [associations]
            symbol:RBMY1B "RNA-binding motif protein, Y chromosome,
            family 1 member B" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0008380 "RNA splicing" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=TAS] [GO:0003723 "RNA binding"
            evidence=NAS] [GO:0008584 "male gonad development" evidence=IMP]
            [GO:0005634 "nucleus" evidence=TAS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0008584
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 EMBL:AC010141 UniGene:Hs.380450 HPA:HPA001534
            IPI:IPI00479500 RefSeq:NP_001006121.1 UniGene:Hs.725744
            ProteinModelPortal:A6NDE4 SMR:A6NDE4 STRING:A6NDE4 PaxDb:A6NDE4
            PRIDE:A6NDE4 Ensembl:ENST00000383020 GeneID:378948 KEGG:hsa:378948
            UCSC:uc004fup.4 CTD:378948 GeneCards:GC0YP023674 HGNC:HGNC:23914
            neXtProt:NX_A6NDE4 PharmGKB:PA134872137 eggNOG:NOG140744
            InParanoid:A6NDE4 OMA:PRDYAYC OrthoDB:EOG4TF0N7 GenomeRNAi:378948
            NextBio:100871 ArrayExpress:A6NDE4 Bgee:A6NDE4 CleanEx:HS_RBMY1B
            Genevestigator:A6NDE4 Uniprot:A6NDE4
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|A6NEQ0 [details] [associations]
            symbol:RBMY1E "RNA-binding motif protein, Y chromosome,
            family 1 member E" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 HPA:HPA001534 UniGene:Hs.725744 OrthoDB:EOG4TF0N7
            EMBL:AC007322 IPI:IPI00472030 RefSeq:NP_001006118.2
            ProteinModelPortal:A6NEQ0 SMR:A6NEQ0 STRING:A6NEQ0
            PhosphoSite:A6NEQ0 PRIDE:A6NEQ0 DNASU:378950
            Ensembl:ENST00000382659 GeneID:378950 KEGG:hsa:378950
            UCSC:uc004fux.4 CTD:378950 GeneCards:GC0YM024027 HGNC:HGNC:23916
            neXtProt:NX_A6NEQ0 PharmGKB:PA134905273 OMA:PYCDREH
            GenomeRNAi:378950 NextBio:100879 ArrayExpress:A6NEQ0 Bgee:A6NEQ0
            Genevestigator:A6NEQ0 Uniprot:A6NEQ0
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|P0C7P1 [details] [associations]
            symbol:RBMY1D "RNA-binding motif protein, Y chromosome,
            family 1 member D" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 UniGene:Hs.380450 HPA:HPA001534 OrthoDB:EOG4TF0N7
            EMBL:AC007322 IPI:IPI00215689 RefSeq:NP_001006120.2
            ProteinModelPortal:P0C7P1 SMR:P0C7P1 PhosphoSite:P0C7P1
            DMDM:190360153 PRIDE:P0C7P1 Ensembl:ENST00000382677
            Ensembl:ENST00000382680 GeneID:378949 KEGG:hsa:378949
            UCSC:uc004fuo.4 CTD:378949 GeneCards:GC0YM024026 HGNC:HGNC:23915
            neXtProt:NX_P0C7P1 PharmGKB:PA134863616 InParanoid:P0C7P1
            OMA:FIGGFNR GenomeRNAi:378949 NextBio:100875 ArrayExpress:P0C7P1
            Bgee:P0C7P1 Genevestigator:P0C7P1 Uniprot:P0C7P1
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|P0DJD3 [details] [associations]
            symbol:RBMY1A1 "RNA-binding motif protein, Y chromosome,
            family 1 member A1" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IDA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0000381
            InterPro:IPR012604 Pfam:PF08081 EMBL:X76059 EMBL:BC047768
            EMBL:BC070298 EMBL:AC010141 IPI:IPI00332760 IPI:IPI00872545
            IPI:IPI00872656 PIR:A49418 RefSeq:NP_005049.1 UniGene:Hs.380450
            PDB:2FY1 PDBsum:2FY1 ProteinModelPortal:P0DJD3 SMR:P0DJD3
            DMDM:27805716 PRIDE:P0DJD3 Ensembl:ENST00000303902
            Ensembl:ENST00000382707 GeneID:5940 KEGG:hsa:5940 CTD:5940
            GeneCards:GC0YP023675 HGNC:HGNC:9912 HPA:HPA001534 MIM:400006
            neXtProt:NX_P0DJD3 OMA:PREYASE PhylomeDB:P0DJD3 GenomeRNAi:5940
            Bgee:P0DJD3 CleanEx:HS_RBMY1A1 GermOnline:ENSG00000174622
            Uniprot:P0DJD3
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|P0DJD4 [details] [associations]
            symbol:RBMY1C "RNA-binding motif protein, Y chromosome,
            family 1 member C" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            InterPro:IPR012604 Pfam:PF08081 IPI:IPI00332760 IPI:IPI00872545
            IPI:IPI00872656 PIR:A49418 DMDM:27805716 HPA:HPA001534 MIM:400006
            CleanEx:HS_RBMY1A1 GermOnline:ENSG00000174622 EMBL:U36608
            EMBL:U36604 EMBL:U36605 EMBL:U36606 EMBL:U36607 EMBL:U36610
            EMBL:U36609 ProteinModelPortal:P0DJD4 SMR:P0DJD4 PRIDE:P0DJD4
            GeneCards:GC0YU900014 HGNC:HGNC:9914 neXtProt:NX_P0DJD4
            Uniprot:P0DJD4
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|Q15415 [details] [associations]
            symbol:RBMY1F "RNA-binding motif protein, Y chromosome,
            family 1 member F/J" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=NAS]
            [GO:0003723 "RNA binding" evidence=NAS] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081 HPA:HPA001534
            MIM:400006 eggNOG:NOG140744 OrthoDB:EOG4TF0N7 EMBL:X76060
            EMBL:AK313597 EMBL:AC023342 EMBL:AC007320 EMBL:BC030018
            EMBL:BC152392 IPI:IPI00413949 IPI:IPI00879122 PIR:B49418
            RefSeq:NP_001006117.2 RefSeq:NP_689798.1 UniGene:Hs.567746
            HSSP:Q14011 ProteinModelPortal:Q15415 SMR:Q15415 STRING:Q15415
            PhosphoSite:Q15415 PaxDb:Q15415 PRIDE:Q15415 DNASU:159163
            DNASU:378951 Ensembl:ENST00000250831 Ensembl:ENST00000303766
            Ensembl:ENST00000414629 GeneID:159163 GeneID:378951 KEGG:hsa:159163
            KEGG:hsa:378951 UCSC:uc004fva.3 UCSC:uc010nxh.3 CTD:159163
            CTD:378951 GeneCards:GC0YM024314 GeneCards:GC0YP024456
            HGNC:HGNC:23974 HGNC:HGNC:23917 neXtProt:NX_Q15415
            PharmGKB:PA134946298 InParanoid:Q15415 OMA:KDMNGTS PhylomeDB:Q15415
            NextBio:87890 Bgee:Q15415 CleanEx:HS_RBMY1F Genevestigator:Q15415
            Uniprot:Q15415
        Length = 496

 Score = 163 (62.4 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 35/69 (50%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE +LK  FG+HG I EV +I DR T +SRG+ F+ F + A A
Sbjct:     3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61

Query:    82 GEAIKEMDG 90
               A K+M+G
Sbjct:    62 KNAAKDMNG 70


>UNIPROTKB|F6VZ39 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL109955
            HGNC:HGNC:15818 IPI:IPI00927190 ProteinModelPortal:F6VZ39
            SMR:F6VZ39 PRIDE:F6VZ39 Ensembl:ENST00000344785 ArrayExpress:F6VZ39
            Bgee:F6VZ39 Uniprot:F6VZ39
        Length = 123

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>UNIPROTKB|Q9H0Z9 [details] [associations]
            symbol:RBM38 "RNA-binding protein 38" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA;IDA] [GO:0010830 "regulation of myotube
            differentiation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IEA;IDA]
            [GO:0043484 "regulation of RNA splicing" evidence=IDA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IDA] [GO:0006977 "DNA damage
            response, signal transduction by p53 class mediator resulting in
            cell cycle arrest" evidence=IDA] [GO:0006978 "DNA damage response,
            signal transduction by p53 class mediator resulting in
            transcription of p21 class mediator" evidence=IDA] [GO:0007050
            "cell cycle arrest" evidence=IDA] [GO:0008285 "negative regulation
            of cell proliferation" evidence=IDA] [GO:0070935 "3'-UTR-mediated
            mRNA stabilization" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 GO:GO:0005634 EMBL:CH471077 GO:GO:0008285
            GO:GO:0030154 GO:GO:0006977 GO:GO:0008380 GO:GO:0000166
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007050
            GO:GO:0007049 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            eggNOG:COG0724 GO:GO:0070935 GO:GO:0010830 EMBL:AL109955
            HOVERGEN:HBG108399 EMBL:AF432218 EMBL:X75314 EMBL:X75315
            EMBL:BC018711 IPI:IPI00306057 IPI:IPI00374855 RefSeq:NP_059965.2
            RefSeq:NP_906270.1 UniGene:Hs.236361 PDB:2CQD PDBsum:2CQD
            ProteinModelPortal:Q9H0Z9 SMR:Q9H0Z9 IntAct:Q9H0Z9 STRING:Q9H0Z9
            PhosphoSite:Q9H0Z9 DMDM:215273895 PaxDb:Q9H0Z9 DNASU:55544
            Ensembl:ENST00000356208 Ensembl:ENST00000440234 GeneID:55544
            KEGG:hsa:55544 UCSC:uc010zzj.2 CTD:55544 GeneCards:GC20P055966
            H-InvDB:HIX0015939 HGNC:HGNC:15818 HPA:CAB017036 MIM:612428
            neXtProt:NX_Q9H0Z9 PharmGKB:PA34449 InParanoid:Q9H0Z9 OMA:VGYGYPA
            EvolutionaryTrace:Q9H0Z9 GenomeRNAi:55544 NextBio:59995
            ArrayExpress:Q9H0Z9 Bgee:Q9H0Z9 CleanEx:HS_RBM38
            Genevestigator:Q9H0Z9 GermOnline:ENSG00000132819 Uniprot:Q9H0Z9
        Length = 239

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    34 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 93

Query:    87 EMDGLV 92
             + + ++
Sbjct:    94 DPNPII 99


>MGI|MGI:3610364 [details] [associations]
            symbol:Rbm24 "RNA binding motif protein 24" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:3610364 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003730
            GO:GO:0043488 HOGENOM:HOG000276232 GO:GO:0010830 CTD:221662
            GeneTree:ENSGT00390000002308 OMA:LQADRMQ OrthoDB:EOG4DV5NS
            EMBL:AC124411 IPI:IPI00380986 RefSeq:NP_001074894.1
            UniGene:Mm.38269 ProteinModelPortal:D3Z4I3 SMR:D3Z4I3
            Ensembl:ENSMUST00000037923 GeneID:666794 KEGG:mmu:666794
            UCSC:uc007qhe.1 NextBio:430851 Bgee:D3Z4I3 Uniprot:D3Z4I3
        Length = 236

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>RGD|1584029 [details] [associations]
            symbol:Rbm24 "RNA binding motif protein 24" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA;ISO] [GO:0010830
            "regulation of myotube differentiation" evidence=IEA;ISO]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1584029 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 GO:GO:0043488 GO:GO:0010830 CTD:221662
            OrthoDB:EOG4DV5NS IPI:IPI00214952 RefSeq:NP_001178029.1
            UniGene:Rn.199020 ProteinModelPortal:D3ZLP6
            Ensembl:ENSRNOT00000022768 GeneID:690139 KEGG:rno:690139
            NextBio:740266 Uniprot:D3ZLP6
        Length = 236

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/66 (48%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    11 TKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 70

Query:    87 EMDGLV 92
             + + ++
Sbjct:    71 DPNPII 76


>ZFIN|ZDB-GENE-050417-329 [details] [associations]
            symbol:zgc:112425 "zgc:112425" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050417-329 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOVERGEN:HBG107480 KO:K13195
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309
            OMA:GNNSGGY EMBL:CABZ01088879 EMBL:CABZ01088880 EMBL:BC093299
            EMBL:BC095030 IPI:IPI00570286 RefSeq:NP_001017797.1
            UniGene:Dr.75965 SMR:Q566W6 STRING:Q566W6
            Ensembl:ENSDART00000093068 Ensembl:ENSDART00000113350 GeneID:550495
            KEGG:dre:550495 NextBio:20879737 Uniprot:Q566W6
        Length = 185

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 32/63 (50%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGGLS+DT E  L+DAF ++G I  V V  +R T +SRG+GFV F +   A +A++ 
Sbjct:     6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65

Query:    88 MDG 90
             M+G
Sbjct:    66 MNG 68


>TAIR|locus:2133862 [details] [associations]
            symbol:AT4G26650 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0042732 "D-xylose
            metabolic process" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 HSSP:Q61474 EMBL:AF419605 EMBL:AY097345 IPI:IPI00533249
            RefSeq:NP_567753.1 UniGene:At.20416 UniGene:At.67937
            ProteinModelPortal:Q8W569 SMR:Q8W569 STRING:Q8W569 PRIDE:Q8W569
            EnsemblPlants:AT4G26650.1 GeneID:828772 KEGG:ath:AT4G26650
            TAIR:At4g26650 InParanoid:Q8W569 OMA:LVEAVIM PhylomeDB:Q8W569
            ProtClustDB:CLSN2689626 Genevestigator:Q8W569 Uniprot:Q8W569
        Length = 455

 Score = 162 (62.1 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 31/81 (38%), Positives = 52/81 (64%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +  A+   KLFIGG+S+DT+E  L++ FG++G+++E  ++ DR TG++RG+GF+ FA  +
Sbjct:     8 MESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 67

Query:    80 AAGEAIKE---MDGLVCRTSK 97
              A   I +   +DG      K
Sbjct:    68 VAERVIMDKHIIDGRTVEAKK 88

 Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 24/55 (43%), Positives = 33/55 (60%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGL     E   K+ F Q G I +V V+ D  T + RG+GF+ F SE
Sbjct:   119 ARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSE 173


>RGD|1306751 [details] [associations]
            symbol:Rbmxrtl "RNA binding motif protein, X chromosome
            retrogene-like" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0001047 "core promoter binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;ISS] [GO:0005719 "nuclear euchromatin" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0006376 "mRNA splice site selection"
            evidence=IDA] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=ISS] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS] [GO:0048025 "negative
            regulation of mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0051260 "protein homooligomerization"
            evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
            evidence=ISS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISS] [GO:0071347 "cellular response to interleukin-1"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1306751 GO:GO:0007275
            GO:GO:0000166 GO:GO:0070062 GO:GO:0051260 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0045944 GO:GO:0006366 GO:GO:0006509
            GO:GO:0005719 GO:GO:0071347 GO:GO:0071013 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0048026 GO:GO:0006376 GO:GO:0000381
            GO:GO:0044530 GeneTree:ENSGT00700000104336 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081 KO:K12885
            OMA:ILLMKDR OrthoDB:EOG4001KF UniGene:Rn.19966 EMBL:AABR03113401
            IPI:IPI00559910 RefSeq:NP_001100890.1 ProteinModelPortal:P84586
            SMR:P84586 STRING:P84586 PhosphoSite:P84586 PRIDE:P84586
            Ensembl:ENSRNOT00000016184 GeneID:307779 KEGG:rno:307779
            UCSC:RGD:1306751 CTD:307779 InParanoid:P84586 NextBio:657858
            Genevestigator:P84586 GermOnline:ENSRNOG00000012138 Uniprot:P84586
        Length = 388

 Score = 160 (61.4 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+E+ ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +  ++M+G
Sbjct:    63 KDVARDMNG 71


>RGD|1585845 [details] [associations]
            symbol:Rbmxl1 "RNA binding motif protein, X-linked-like 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1585845 GO:GO:0005634 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030529
            GeneTree:ENSGT00700000104336 InterPro:IPR012604 Pfam:PF08081
            OrthoDB:EOG4CNQSK EMBL:AC136101 IPI:IPI00763272 UniGene:Rn.19966
            Ensembl:ENSRNOT00000041672 UCSC:RGD:1585845 Uniprot:D4AE41
        Length = 388

 Score = 160 (61.4 bits), Expect = 4.2e-11, P = 4.2e-11
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  FG++G I+E+ ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +  ++M+G
Sbjct:    63 KDVARDMNG 71


>UNIPROTKB|H9KZV5 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0009411 "response to UV"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0048255 "mRNA stabilization" evidence=IEA] [GO:0070181 "SSU
            rRNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000019966 Uniprot:H9KZV5
        Length = 190

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KL +GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A +A+  
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|H9L0U4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000029134 Uniprot:H9L0U4
        Length = 167

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KL +GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A +A+  
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|H9L3B3 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000036191 Uniprot:H9L3B3
        Length = 172

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 31/63 (49%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KL +GGLS+DTNE  L+  F ++G+I EV V+ DR T +SRG+GFV F +   A +A+  
Sbjct:     7 KLLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|Q9PTX2 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8400 "Rana catesbeiana" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS] [GO:0009409
            "response to cold" evidence=ISS] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
            [GO:0019899 "enzyme binding" evidence=ISS] [GO:0022008
            "neurogenesis" evidence=ISS] [GO:0042750 "hibernation"
            evidence=IEP] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] [GO:0005840 "ribosome" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0019899 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 HSSP:P09651 EMBL:AB025351 ProteinModelPortal:Q9PTX2
            SMR:Q9PTX2 GO:GO:0042750 Uniprot:Q9PTX2
        Length = 164

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 35/75 (46%), Positives = 48/75 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKF-----ASEAAAG 82
             KLF+GGLS+DT+E  L+  F ++G+I EV V+ DR T +SRG+GFV F     A +A AG
Sbjct:     7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66

Query:    83 EAIKEMDGLVCRTSK 97
                K +DG   R  +
Sbjct:    67 MNGKTVDGRQIRVDQ 81


>MGI|MGI:1099460 [details] [associations]
            symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0009409
            "response to cold" evidence=IDA] [GO:0015934 "large ribosomal
            subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
            [GO:0043023 "ribosomal large subunit binding" evidence=IPI]
            [GO:0045727 "positive regulation of translation" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0030425 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724
            HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG4HHP40
            GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186 EMBL:AB016424
            EMBL:AY052560 EMBL:BC006580 IPI:IPI00130883 RefSeq:NP_001159882.1
            RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569
            ProteinModelPortal:O89086 SMR:O89086 IntAct:O89086 STRING:O89086
            PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086
            PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619
            Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652
            NextBio:296916 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086
            GermOnline:ENSMUSG00000031167 Uniprot:O89086
        Length = 153

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/63 (46%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A +A++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|G3V6P6 [details] [associations]
            symbol:Rbm3 "Putative RNA-binding protein 3" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IEA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large
            subunit binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620145 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488
            NextBio:618509 EMBL:CH474078 Ensembl:ENSRNOT00000007367
            Uniprot:G3V6P6
        Length = 156

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 29/63 (46%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A +A++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|E1BLB7 [details] [associations]
            symbol:RBM38 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043484 "regulation of RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0007050 "cell cycle arrest"
            evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
            by p53 class mediator resulting in transcription of p21 class
            mediator" evidence=IEA] [GO:0006977 "DNA damage response, signal
            transduction by p53 class mediator resulting in cell cycle arrest"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008285 GO:GO:0006977 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007050 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            GO:GO:0070935 GO:GO:0010830 GeneTree:ENSGT00390000002308 CTD:55544
            OMA:VGYGYPA EMBL:DAAA02036351 IPI:IPI00696591 RefSeq:NP_001192952.1
            UniGene:Bt.106613 ProteinModelPortal:E1BLB7
            Ensembl:ENSBTAT00000010660 GeneID:533516 KEGG:bta:533516
            NextBio:20876057 Uniprot:E1BLB7
        Length = 239

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/61 (52%), Positives = 39/61 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    34 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 93

Query:    87 E 87
             +
Sbjct:    94 D 94


>UNIPROTKB|A5GFN7 [details] [associations]
            symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:CR956362 HOVERGEN:HBG108399
            GeneTree:ENSGT00390000002308 UniGene:Ssc.29738
            ProteinModelPortal:A5GFN7 STRING:A5GFN7 Ensembl:ENSSSCT00000033672
            ArrayExpress:A5GFN7 Uniprot:A5GFN7
        Length = 193

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/61 (52%), Positives = 39/61 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    34 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 93

Query:    87 E 87
             +
Sbjct:    94 D 94


>UNIPROTKB|A5GFN8 [details] [associations]
            symbol:RNPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=IEA] [GO:0043484 "regulation of RNA splicing"
            evidence=IEA] [GO:0010830 "regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0007050 "cell cycle arrest"
            evidence=IEA] [GO:0006978 "DNA damage response, signal transduction
            by p53 class mediator resulting in transcription of p21 class
            mediator" evidence=IEA] [GO:0006977 "DNA damage response, signal
            transduction by p53 class mediator resulting in cell cycle arrest"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008285 GO:GO:0006977 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007050 GO:GO:0003730 GO:GO:0043484 GO:GO:0006978
            HOGENOM:HOG000276232 GO:GO:0070935 GO:GO:0010830 EMBL:CR956362
            HOVERGEN:HBG108399 GeneTree:ENSGT00390000002308 OrthoDB:EOG4DV5NS
            CTD:55544 OMA:VGYGYPA UniGene:Ssc.29738 RefSeq:NP_001098782.1
            SMR:A5GFN8 STRING:A5GFN8 Ensembl:ENSSSCT00000008216
            GeneID:100125973 KEGG:ssc:100125973 Uniprot:A5GFN8
        Length = 239

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 32/61 (52%), Positives = 39/61 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T +  L+  F   G+I E  VI DR TG+SRGYGFV  A  AAA  A K
Sbjct:    34 TKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACK 93

Query:    87 E 87
             +
Sbjct:    94 D 94


>TAIR|locus:2172144 [details] [associations]
            symbol:AT5G54580 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005739
            "mitochondrion" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AB016879 HOGENOM:HOG000276232
            HSSP:Q61474 UniGene:At.52694 EMBL:AY072101 EMBL:AY096589
            EMBL:AY085234 IPI:IPI00521049 RefSeq:NP_200269.1 UniGene:At.20805
            ProteinModelPortal:Q9FIU6 SMR:Q9FIU6 IntAct:Q9FIU6 PaxDb:Q9FIU6
            PRIDE:Q9FIU6 EnsemblPlants:AT5G54580.1 GeneID:835546
            KEGG:ath:AT5G54580 TAIR:At5g54580 eggNOG:NOG324885
            InParanoid:Q9FIU6 OMA:IKGMDGK PhylomeDB:Q9FIU6
            ProtClustDB:CLSN2696829 ArrayExpress:Q9FIU6 Genevestigator:Q9FIU6
            Uniprot:Q9FIU6
        Length = 156

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 30/68 (44%), Positives = 43/68 (63%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A   T LF+ GLS  T    L+ AF Q GE+ + KV+ DRV+G S+G+GFV++A+   + 
Sbjct:    52 AEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSA 111

Query:    83 EAIKEMDG 90
             + I  MDG
Sbjct:   112 KGIAGMDG 119


>TAIR|locus:2011726 [details] [associations]
            symbol:AT1G76460 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0048573 "photoperiodism,
            flowering" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 UniGene:At.43912
            UniGene:At.70089 IPI:IPI00542968 RefSeq:NP_565132.2
            UniGene:At.69045 ProteinModelPortal:F4I2E4 SMR:F4I2E4 PRIDE:F4I2E4
            EnsemblPlants:AT1G76460.1 GeneID:843979 KEGG:ath:AT1G76460
            OMA:YGPEYMY Uniprot:F4I2E4
        Length = 285

 Score = 155 (59.6 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL+++T    L+  F Q+GEI+E  VI D+ TG+S+GYGFV F    AA  A  
Sbjct:    24 TKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACA 83

Query:    87 EMDGLVCRTSKDTDMLSTG 105
             +   ++     + ++ S G
Sbjct:    84 DPTPIIDGRRANCNLASLG 102


>UNIPROTKB|F6RBQ9 [details] [associations]
            symbol:F6RBQ9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043023 "ribosomal large subunit binding" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0006412
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 GO:GO:0035196 GO:GO:0043023
            OMA:SDAMRAM EMBL:DAAA02073061 IPI:IPI00691523
            Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9
        Length = 160

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A  A++ 
Sbjct:     7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|I3L5X7 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:FP325173 RefSeq:NP_001230348.1 UniGene:Ssc.3311
            Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807
            Uniprot:I3L5X7
        Length = 156

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A  A++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|O75526 [details] [associations]
            symbol:RBMXL2 "RNA-binding motif protein, X-linked-like-2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0030529 CTD:27288 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 OMA:GDFDLRP OrthoDB:EOG4WSWBK InterPro:IPR012604
            Pfam:PF08081 eggNOG:NOG140744 HSSP:Q14011 EMBL:AF069682
            EMBL:AC100875 EMBL:BC057796 EMBL:AF279289 IPI:IPI00004450
            RefSeq:NP_055284.3 UniGene:Hs.121605 ProteinModelPortal:O75526
            SMR:O75526 IntAct:O75526 STRING:O75526 PhosphoSite:O75526
            PaxDb:O75526 PRIDE:O75526 Ensembl:ENST00000306904 GeneID:27288
            KEGG:hsa:27288 UCSC:uc001mfc.2 GeneCards:GC11P007068
            H-InvDB:HIX0035856 H-InvDB:HIX0171337 HGNC:HGNC:17886 HPA:HPA038912
            HPA:HPA051842 MIM:605444 neXtProt:NX_O75526 PharmGKB:PA162400840
            InParanoid:O75526 PhylomeDB:O75526 GenomeRNAi:27288 NextBio:50232
            Bgee:O75526 CleanEx:HS_RBMXL2 Genevestigator:O75526 Uniprot:O75526
        Length = 392

 Score = 157 (60.3 bits), Expect = 9.1e-11, P = 9.1e-11
 Identities = 32/69 (46%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +T+E  L+  FG++G I+EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
               A ++M+G
Sbjct:    63 KAAARDMNG 71


>UNIPROTKB|E2R771 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:AAEX03026334 RefSeq:XP_863171.1 ProteinModelPortal:E2R771
            Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457
            Uniprot:E2R771
        Length = 162

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F     A +A++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>TAIR|locus:2063177 [details] [associations]
            symbol:AT2G41060 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009693
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0000166
            GO:GO:0008219 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0010150
            EMBL:AC004261 eggNOG:COG0724 KO:K12741 HSSP:P09012 OMA:CHKANDG
            EMBL:AF439844 EMBL:AY133583 EMBL:AK227158 IPI:IPI00545461
            PIR:T02113 RefSeq:NP_001078035.1 RefSeq:NP_181639.1
            UniGene:At.65764 ProteinModelPortal:O80678 SMR:O80678 IntAct:O80678
            STRING:O80678 PaxDb:O80678 PRIDE:O80678 EnsemblPlants:AT2G41060.1
            EnsemblPlants:AT2G41060.2 GeneID:818705 KEGG:ath:AT2G41060
            TAIR:At2g41060 HOGENOM:HOG000070822 InParanoid:O80678
            PhylomeDB:O80678 ProtClustDB:CLSN2683657 ArrayExpress:O80678
            Genevestigator:O80678 Uniprot:O80678
        Length = 451

 Score = 158 (60.7 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 31/71 (43%), Positives = 48/71 (67%)

Query:    18 RLLSDANS-RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFA 76
             R+++D +    K+F+ GL +DT    L DAF Q+GEI + K + D+V+GQS+GYGF+ F 
Sbjct:   118 RIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFK 177

Query:    77 SEAAAGEAIKE 87
             S + A  A+K+
Sbjct:   178 SRSGARNALKQ 188


>UNIPROTKB|P98179 [details] [associations]
            symbol:RBM3 "Putative RNA-binding protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0030425
            "dendrite" evidence=ISS] [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=ISS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
            GO:GO:0045727 eggNOG:COG0724 GO:GO:0015934 HOVERGEN:HBG107480
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GO:GO:0035196 EMBL:AF196969
            GO:GO:0043023 EMBL:U28686 EMBL:BC006825 IPI:IPI00024320 PIR:G01859
            RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179
            SMR:P98179 IntAct:P98179 MINT:MINT-5002714 STRING:P98179
            PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179
            PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755
            Ensembl:ENST00000376759 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2
            CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624
            MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179
            KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GenomeRNAi:5935
            NextBio:23136 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3
            Genevestigator:P98179 GermOnline:ENSG00000102317 Uniprot:P98179
        Length = 157

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A  A++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>RGD|620145 [details] [associations]
            symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0006417 "regulation of translation"
            evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0009409 "response to cold" evidence=ISO] [GO:0015934 "large
            ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite"
            evidence=IDA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=ISO] [GO:0043023 "ribosomal large
            subunit binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727
            eggNOG:COG0724 HOVERGEN:HBG107480 HSSP:P09651 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186
            EMBL:FM093406 EMBL:AF355190 IPI:IPI00367437 IPI:IPI00955177
            RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0
            MINT:MINT-4611770 STRING:Q925G0 PRIDE:Q925G0 GeneID:114488
            KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509
            Genevestigator:Q925G0 Uniprot:Q925G0
        Length = 155

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/63 (44%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T+E  L+D F   G I EV V+ DR T +SRG+GF+ F +   A + ++ 
Sbjct:     7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>TAIR|locus:2027438 [details] [associations]
            symbol:GR-RBP6 "glycine-rich RNA-binding protein 6"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009651 "response to salt stress"
            evidence=IEP] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684 GO:GO:0005794
            GO:GO:0000166 GO:GO:0005768 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0005802 HSSP:P09651 EMBL:AC026238 EMBL:BT005999 EMBL:AK227482
            EMBL:AY085358 IPI:IPI00537929 PIR:A86320 RefSeq:NP_173298.1
            UniGene:At.356 UniGene:At.41785 ProteinModelPortal:Q9FZ84
            SMR:Q9FZ84 IntAct:Q9FZ84 PaxDb:Q8LEL7 PRIDE:Q9FZ84
            EnsemblPlants:AT1G18630.1 GeneID:838444 KEGG:ath:AT1G18630
            GeneFarm:3974 TAIR:At1g18630 eggNOG:NOG255734 InParanoid:Q9FZ84
            OMA:IFRQPRA PhylomeDB:Q9FZ84 ProtClustDB:CLSN2914186
            Genevestigator:Q9FZ84 Uniprot:Q9FZ84
        Length = 155

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 31/71 (43%), Positives = 47/71 (66%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI- 85
             +K+F+GGLS  T+  +LK+AFG  G+I++  V+ DR +G SRG+GFV + S   A  A+ 
Sbjct:    36 SKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQ 95

Query:    86 ----KEMDGLV 92
                 KE+DG +
Sbjct:    96 AMQNKELDGRI 106


>UNIPROTKB|Q9LEB4 [details] [associations]
            symbol:RBP45 "Polyadenylate-binding protein RBP45"
            species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0008143 EMBL:AJ292767 HSSP:O08583
            ProteinModelPortal:Q9LEB4 Uniprot:Q9LEB4
        Length = 409

 Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 29/75 (38%), Positives = 49/75 (65%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQ-HGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             D ++   +F+G L+ D  + +L++ F   +  +   KV+ DR+TG+S+GYGFVKFA E+ 
Sbjct:   171 DDSAEHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESE 230

Query:    81 AGEAIKEMDGLVCRT 95
                A+ EM+G++C T
Sbjct:   231 QLRAMTEMNGVLCST 245

 Score = 130 (50.8 bits), Expect = 8.6e-08, P = 8.6e-08
 Identities = 28/67 (41%), Positives = 39/67 (58%)

Query:    24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGE 83
             N    L+IG L Y  +E  L   F   GE++  KVI ++ TGQS GYGF++F S AAA  
Sbjct:    81 NEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAET 140

Query:    84 AIKEMDG 90
              ++  +G
Sbjct:   141 ILQTYNG 147

 Score = 104 (41.7 bits), Expect = 5.7e-05, P = 5.7e-05
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD N+ T +F+GGL     E  L+  F  +GE++ VK++        +  GFV+F + A+
Sbjct:   277 SDPNNTT-IFVGGLDPTVAEEHLRQVFSPYGELVHVKIVA------GKRCGFVQFGTRAS 329

Query:    81 AGEAIKEMDG 90
             A +A+  ++G
Sbjct:   330 AEQALSSLNG 339


>UNIPROTKB|Q6IRQ4 [details] [associations]
            symbol:rbmx "RNA-binding motif protein, X chromosome"
            species:8355 "Xenopus laevis" [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005719 "nuclear euchromatin"
            evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=ISS] [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048025
            "negative regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0070062 "extracellular
            vesicular exosome" evidence=ISS] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISS] [GO:0071347 "cellular response to
            interleukin-1" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007275
            GO:GO:0008380 GO:GO:0000166 GO:GO:0070062 GO:GO:0051260
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0045944
            GO:GO:0003682 GO:GO:0006366 GO:GO:0006509 GO:GO:0001047
            GO:GO:0005719 GO:GO:0071347 GO:GO:0071013 GO:GO:0048025
            GO:GO:0048026 GO:GO:0000381 GO:GO:0044530 HOVERGEN:HBG063314
            InterPro:IPR012604 Pfam:PF08081 CTD:27316 KO:K12885 EMBL:BC070649
            RefSeq:NP_001084981.1 UniGene:Xl.25221 HSSP:P08579
            ProteinModelPortal:Q6IRQ4 SMR:Q6IRQ4 GeneID:432041 KEGG:xla:432041
            Xenbase:XB-GENE-6078824 Uniprot:Q6IRQ4
        Length = 370

 Score = 155 (59.6 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  F ++G ++EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A +E++G
Sbjct:    63 KDAARELNG 71


>UNIPROTKB|A9UMT9 [details] [associations]
            symbol:LOC100135403 "LOC100135403 protein" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005719 "nuclear euchromatin"
            evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006509 "membrane protein ectodomain
            proteolysis" evidence=ISS] [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048025
            "negative regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0070062 "extracellular
            vesicular exosome" evidence=ISS] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISS] [GO:0071347 "cellular response to
            interleukin-1" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            GO:GO:0070062 GO:GO:0051260 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0045944 GO:GO:0003682 GO:GO:0006366 GO:GO:0006509
            GO:GO:0001047 GO:GO:0005719 GO:GO:0071347 GO:GO:0071013
            GO:GO:0048025 eggNOG:COG0724 GO:GO:0048026 GO:GO:0000381
            GO:GO:0044530 HOVERGEN:HBG063314 InterPro:IPR012604 Pfam:PF08081
            EMBL:BC157792 UniGene:Str.67350 ProteinModelPortal:A9UMT9
            STRING:A9UMT9 Uniprot:A9UMT9
        Length = 375

 Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +TNE  L+  F ++G ++EV ++ DR T +SRG+ FV F S A A
Sbjct:     3 EADRPGKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADA 62

Query:    82 GEAIKEMDG 90
              +A +E++G
Sbjct:    63 KDAARELNG 71


>UNIPROTKB|J9P972 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            Ensembl:ENSCAFT00000049246 Uniprot:J9P972
        Length = 258

 Score = 150 (57.9 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/75 (40%), Positives = 44/75 (58%)

Query:    11 SHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGY 70
             SHS    R  + A  R KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+
Sbjct:    40 SHSSVSARKAAQAALR-KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGF 98

Query:    71 GFVKFASEAAAGEAI 85
             GFVKF      G  +
Sbjct:    99 GFVKFKDPNCVGTVL 113

 Score = 119 (46.9 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   134 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 193

Query:    81 AGEAI 85
               +A+
Sbjct:   194 VDQAV 198


>ZFIN|ZDB-GENE-030131-5923 [details] [associations]
            symbol:rbm38 "RNA binding motif protein 38"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030131-5923 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 HSSP:Q61474
            HOVERGEN:HBG108399 EMBL:AB097829 IPI:IPI00861911 UniGene:Dr.80564
            ProteinModelPortal:Q7T2V9 SMR:Q7T2V9 STRING:Q7T2V9
            InParanoid:Q7T2V9 Uniprot:Q7T2V9
        Length = 246

 Score = 149 (57.5 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query:     2 QWLNGSVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICD 61
             Q++NG++       +  +  D    TK+F+GGL Y T +  L+  F   G+I E  VI D
Sbjct:     5 QFVNGTLE----TMYPSIQKDTTF-TKIFVGGLPYHTTDASLRKYFETFGDIDEAVVITD 59

Query:    62 RVTGQSRGYGFVKFASEAAAGEAIKEMDGLV 92
             R TG+SRGYGFV    ++AA  A K+ + ++
Sbjct:    60 RQTGKSRGYGFVTMMDKSAAERACKDPNPII 90


>TAIR|locus:2044370 [details] [associations]
            symbol:AT2G46780 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:BT022057
            IPI:IPI00944264 RefSeq:NP_182201.4 UniGene:At.22279
            ProteinModelPortal:Q501B0 SMR:Q501B0 PRIDE:Q501B0
            EnsemblPlants:AT2G46780.1 GeneID:819291 KEGG:ath:AT2G46780
            TAIR:At2g46780 OMA:FPYSTYG PhylomeDB:Q501B0 ProtClustDB:CLSN2722623
            Genevestigator:Q501B0 Uniprot:Q501B0
        Length = 336

 Score = 153 (58.9 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 29/66 (43%), Positives = 44/66 (66%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL+++T    ++  F Q GEI+E  VI D+ TG+S+GYGFV F    AA  A +
Sbjct:    22 TKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQ 81

Query:    87 EMDGLV 92
              M+ ++
Sbjct:    82 NMNPVI 87


>UNIPROTKB|Q29RT0 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome"
            species:9913 "Bos taurus" [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0048026 "positive regulation of
            mRNA splicing, via spliceosome" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
            [GO:0070062 "extracellular vesicular exosome" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0048025 "negative regulation
            of mRNA splicing, via spliceosome" evidence=ISS] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISS] [GO:0005719 "nuclear
            euchromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0071347 "cellular
            response to interleukin-1" evidence=ISS] [GO:0006509 "membrane
            protein ectodomain proteolysis" evidence=ISS] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008380 GO:GO:0000166 GO:GO:0070062 GO:GO:0051260
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0045944
            GO:GO:0003682 GO:GO:0006366 GO:GO:0006509 GO:GO:0001047
            GO:GO:0005719 GO:GO:0071347 GO:GO:0071013 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0048026 GO:GO:0000381 GO:GO:0044530
            EMBL:BC114040 IPI:IPI00721392 RefSeq:NP_001040075.1
            RefSeq:XP_001250252.1 UniGene:Bt.59490 ProteinModelPortal:Q29RT0
            SMR:Q29RT0 Ensembl:ENSBTAT00000066112 GeneID:617969 GeneID:782306
            KEGG:bta:617969 KEGG:bta:782306 CTD:27288
            GeneTree:ENSGT00700000104336 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InParanoid:Q29RT0 OMA:GDFDLRP OrthoDB:EOG4WSWBK
            NextBio:20900925 InterPro:IPR012604 Pfam:PF08081 Uniprot:Q29RT0
        Length = 396

 Score = 154 (59.3 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             +A+   KLFIGGL+ +T+E  L+  FG++G I EV ++ DR T +SRG+ F+ F S A A
Sbjct:     3 EADRPGKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADA 62

Query:    82 GEAIKEMDG 90
               A+++M+G
Sbjct:    63 KAAVRDMNG 71


>TAIR|locus:2102435 [details] [associations]
            symbol:ARP1 "ABA-regulated RNA-binding protein 1"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0009414 "response to water deprivation" evidence=IMP]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
            "response to abscisic acid stimulus" evidence=IEP] [GO:0010029
            "regulation of seed germination" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GO:GO:0000166
            GO:GO:0009651 GO:GO:0009414 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0010029 EMBL:AL138650 HSSP:P11940 IPI:IPI00531276 PIR:T47636
            RefSeq:NP_191037.1 UniGene:At.20812 ProteinModelPortal:Q9M1S3
            SMR:Q9M1S3 DNASU:824642 EnsemblPlants:AT3G54770.1 GeneID:824642
            KEGG:ath:AT3G54770 TAIR:At3g54770 InParanoid:Q9M1S3 OMA:FYHFHQS
            PhylomeDB:Q9M1S3 ProtClustDB:CLSN2685114 Genevestigator:Q9M1S3
            Uniprot:Q9M1S3
        Length = 261

 Score = 149 (57.5 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 28/79 (35%), Positives = 51/79 (64%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL++DT++  + D F ++G+I+E  +I D++T +S+GYGFV F    AA  A +
Sbjct:    17 TKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACE 76

Query:    87 EMDGLVCRTSKDTDMLSTG 105
             +   ++     + ++ S G
Sbjct:    77 DSTPIINGRRANCNLASLG 95


>TAIR|locus:2179939 [details] [associations]
            symbol:AtRZ-1c "AtRZ-1c" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA;IDA] [GO:0003723
            "RNA binding" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IGI;IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
            InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
            SMART:SM00343 SMART:SM00360 EMBL:CP002688 GO:GO:0005730
            GO:GO:0000166 GO:GO:0046872 GO:GO:0009409 GO:GO:0009414
            GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 HOGENOM:HOG000276232 HSSP:Q14103 KO:K12885
            ProtClustDB:CLSN2718554 EMBL:AY092975 EMBL:AY114645 IPI:IPI00520891
            RefSeq:NP_196048.1 UniGene:At.33149 ProteinModelPortal:Q8RWN5
            SMR:Q8RWN5 IntAct:Q8RWN5 STRING:Q8RWN5 PRIDE:Q8RWN5
            EnsemblPlants:AT5G04280.1 GeneID:830307 KEGG:ath:AT5G04280
            TAIR:At5g04280 InParanoid:Q8RWN5 OMA:ESIREMH PhylomeDB:Q8RWN5
            ArrayExpress:Q8RWN5 Genevestigator:Q8RWN5 Uniprot:Q8RWN5
        Length = 310

 Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 27/68 (39%), Positives = 47/68 (69%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A   +++F+GGLS +  +  L+ AF + G+I++ +++ +R TG+SRG+GF+ FA   A  
Sbjct:     3 AKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMD 62

Query:    83 EAIKEMDG 90
             E+I+EM G
Sbjct:    63 ESIREMHG 70


>UNIPROTKB|J3QKT5 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5
            Ensembl:ENST00000581776 Uniprot:J3QKT5
        Length = 99

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 33/74 (44%), Positives = 44/74 (59%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA----GE 83
             K+FIGGLS+ T+   L+D F + GEI E  V+ D  T +SRG+GFV FA  A+     G+
Sbjct:    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81

Query:    84 AIKEMDGLVCRTSK 97
                E+D   CR  K
Sbjct:    82 PHHELDSKTCRRQK 95


>TAIR|locus:4515103555 [details] [associations]
            symbol:AT5G11412 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:DQ487706 IPI:IPI00775531 RefSeq:NP_001119208.1
            UniGene:At.69225 ProteinModelPortal:Q1G378 SMR:Q1G378 STRING:Q1G378
            EnsemblPlants:AT5G11412.1 GeneID:6240527 KEGG:ath:AT5G11412
            TAIR:At5g11412 OMA:IDGREAK PhylomeDB:Q1G378 ProtClustDB:CLSN2925591
            Genevestigator:Q1G378 Uniprot:Q1G378
        Length = 175

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             TK+++GGL ++T    L+  F Q G+II V ++CDR TG+S GYGFV F    +A  A
Sbjct:    52 TKIYVGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTFRDAESATRA 109


>TAIR|locus:2037370 [details] [associations]
            symbol:AT1G20880 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00530203 RefSeq:NP_001185049.1 RefSeq:NP_564127.1
            UniGene:At.26164 ProteinModelPortal:F4HUQ5 SMR:F4HUQ5 PRIDE:F4HUQ5
            EnsemblPlants:AT1G20880.1 EnsemblPlants:AT1G20880.2 GeneID:838681
            KEGG:ath:AT1G20880 OMA:MAYHSIP Uniprot:F4HUQ5
        Length = 274

 Score = 149 (57.5 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL+++T    L+  F Q+G+I+E  VI D+ TG+S+GYGFV F    AA  A  
Sbjct:    24 TKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACV 83

Query:    87 EMDGLVCRTSKDTDMLSTG 105
             +   ++     + ++ S G
Sbjct:    84 DPTPIIDGRRANCNLASLG 102


>TAIR|locus:2006998 [details] [associations]
            symbol:AT1G33470 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AK176398 IPI:IPI00533784
            RefSeq:NP_174613.2 UniGene:At.17522 UniGene:At.67846
            ProteinModelPortal:Q67YS0 SMR:Q67YS0 PaxDb:Q67YS0 PRIDE:Q67YS0
            EnsemblPlants:AT1G33470.1 GeneID:840240 KEGG:ath:AT1G33470
            TAIR:At1g33470 InParanoid:Q67YS0 OMA:GAQYPFY PhylomeDB:Q67YS0
            ProtClustDB:CLSN2680737 ArrayExpress:Q67YS0 Genevestigator:Q67YS0
            Uniprot:Q67YS0
        Length = 245

 Score = 147 (56.8 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 27/58 (46%), Positives = 43/58 (74%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             TK+F+GGL+++T++  L++ F Q G+I+E  VI D+ +G+S+GYGFV F    AA +A
Sbjct:     7 TKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKA 64


>TAIR|locus:2173967 [details] [associations]
            symbol:AT5G55550 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002688 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            KO:K14411 HSSP:Q61474 ProtClustDB:CLSN2689626 EMBL:AY050796
            EMBL:AY096460 IPI:IPI00543007 RefSeq:NP_568826.1 RefSeq:NP_974937.1
            UniGene:At.6910 ProteinModelPortal:Q949Z3 SMR:Q949Z3 PRIDE:Q949Z3
            EnsemblPlants:AT5G55550.2 EnsemblPlants:AT5G55550.3 GeneID:835649
            KEGG:ath:AT5G55550 TAIR:At5g55550 InParanoid:Q949Z3 OMA:VSERVIM
            PhylomeDB:Q949Z3 Genevestigator:Q949Z3 Uniprot:Q949Z3
        Length = 460

 Score = 154 (59.3 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGG+S+DT+E  L+D F  +G+++E  ++ DR TG++RG+GF+ FA    +   I +
Sbjct:     7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66

Query:    88 ---MDGLVCRTSK 97
                +DG      K
Sbjct:    67 KHIIDGRTVEAKK 79

 Score = 106 (42.4 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 24/61 (39%), Positives = 34/61 (55%)

Query:    26 RTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             RTK +F+GGL     E   K+ F Q G I +V V+ D  T + RG+GF+ F S+ A    
Sbjct:   108 RTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRV 167

Query:    85 I 85
             +
Sbjct:   168 L 168


>TAIR|locus:2017779 [details] [associations]
            symbol:AT1G22910 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00523114
            RefSeq:NP_973889.1 UniGene:At.26231 ProteinModelPortal:F4I321
            SMR:F4I321 EnsemblPlants:AT1G22910.3 GeneID:838898
            KEGG:ath:AT1G22910 ArrayExpress:F4I321 Uniprot:F4I321
        Length = 347

 Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
 Identities = 30/79 (37%), Positives = 49/79 (62%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL+++T++  +K  F Q GEI+E  VI D+ +G+S+GYGFV F    AA  A  
Sbjct:    13 TKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACV 72

Query:    87 EMDGLVCRTSKDTDMLSTG 105
             +   ++     + ++ S G
Sbjct:    73 DATPVIDGRRANCNLASLG 91


>UNIPROTKB|K7EQ02 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 HGNC:HGNC:2683 EMBL:AC005329 EMBL:AC027307
            Ensembl:ENST00000592453 Uniprot:K7EQ02
        Length = 225

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A+   KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF     
Sbjct:     4 SGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63

Query:    81 AGEAI 85
              G  +
Sbjct:    64 VGTVL 68

 Score = 119 (46.9 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:    85 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 144

Query:    81 AGEAI 85
               +A+
Sbjct:   145 VDQAV 149


>UNIPROTKB|Q28IQ9 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
            [GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
            development" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
            regulation of translation" evidence=ISS] [GO:0048255 "mRNA
            stabilization" evidence=ISS] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
            GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
            GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
            RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
            SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
            Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
        Length = 166

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 27/63 (42%), Positives = 44/63 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T E  L+  F ++G++ EV V+ DR + +SRG+GFV F +   A +A+  
Sbjct:     7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66

Query:    88 MDG 90
             M+G
Sbjct:    67 MNG 69


>UNIPROTKB|G4N7J4 [details] [associations]
            symbol:MGG_06400 "Nuclear and cytoplasmic polyadenylated
            RNA-binding protein pub1" species:242507 "Magnaporthe oryzae 70-15"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CM001234
            KO:K13201 RefSeq:XP_003717170.1 ProteinModelPortal:G4N7J4
            EnsemblFungi:MGG_06400T0 GeneID:2684555 KEGG:mgr:MGG_06400
            Uniprot:G4N7J4
        Length = 479

 Score = 153 (58.9 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 38/98 (38%), Positives = 50/98 (51%)

Query:     1 MQWLNGSVRFSHSVRFTRLLSDANSRTK--------LFIGGLSYDTNETVLKDAFGQHGE 52
             MQ LNG       +R       A S TK        +F+G LS + N+ VL  AF   G 
Sbjct:   142 MQTLNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGS 201

Query:    53 IIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDG 90
             + E +V+ D  TG+SRGYGFV F   + A +A+  MDG
Sbjct:   202 VSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDG 239

 Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/75 (32%), Positives = 40/75 (53%)

Query:    16 FTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKF 75
             FTR  +   ++  L++GGL     E VL+  F   G +  VK+I D+   +   YGFV++
Sbjct:    74 FTRRTAPEPNKRALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEY 132

Query:    76 ASEAAAGEAIKEMDG 90
                 AA  A++ ++G
Sbjct:   133 DDPGAADRAMQTLNG 147


>WB|WBGene00006321 [details] [associations]
            symbol:sup-12 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000380
            "alternative mRNA splicing, via spliceosome" evidence=IMP]
            [GO:0040012 "regulation of locomotion" evidence=IGI] [GO:0032956
            "regulation of actin cytoskeleton organization" evidence=IGI]
            [GO:0016607 "nuclear speck" evidence=IDA] [GO:0036002 "pre-mRNA
            binding" evidence=IPI] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0097157 "pre-mRNA
            intronic binding" evidence=IPI] [GO:0030529 "ribonucleoprotein
            complex" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0040012 GO:GO:0030529 GO:GO:0032956 GO:GO:0097157
            GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
            GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
            KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
            ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
            MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
            UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
            NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
        Length = 248

 Score = 146 (56.5 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T++  L + F Q G+I E  VI DR T +SRGYGFV     A+A  A K
Sbjct:    35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94

Query:    87 EMDGLV 92
             + + ++
Sbjct:    95 DPNPII 100


>UNIPROTKB|O45189 [details] [associations]
            symbol:sup-12 "Protein SUP-12, isoform a" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0016607
            Gene3D:3.30.70.330 GO:GO:0040012 GO:GO:0030529 GO:GO:0032956
            GO:GO:0097157 GO:GO:0000380 HSSP:P09651 HOGENOM:HOG000276232
            GeneTree:ENSGT00390000002308 EMBL:FO081409 GeneID:180674
            KEGG:cel:CELE_T22B2.4 CTD:180674 PIR:T33034 RefSeq:NP_508674.1
            ProteinModelPortal:O45189 SMR:O45189 DIP:DIP-24970N IntAct:O45189
            MINT:MINT-1047167 STRING:O45189 EnsemblMetazoa:T22B2.4a
            UCSC:T22B2.4 WormBase:T22B2.4a InParanoid:O45189 OMA:DRNTQKS
            NextBio:910400 ArrayExpress:O45189 Uniprot:O45189
        Length = 248

 Score = 146 (56.5 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 30/66 (45%), Positives = 42/66 (63%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL Y T++  L + F Q G+I E  VI DR T +SRGYGFV     A+A  A K
Sbjct:    35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94

Query:    87 EMDGLV 92
             + + ++
Sbjct:    95 DPNPII 100


>TAIR|locus:2150215 [details] [associations]
            symbol:AT5G19350 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0010048 "vernalization response" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            EMBL:AF296837 GO:GO:0010494 GO:GO:0008143 HSSP:Q14103 EMBL:AY074319
            EMBL:AY114004 IPI:IPI00526390 IPI:IPI00846741 RefSeq:NP_001078604.1
            RefSeq:NP_197436.1 UniGene:At.31302 ProteinModelPortal:Q8VXZ9
            SMR:Q8VXZ9 PRIDE:Q8VXZ9 EnsemblPlants:AT5G19350.1 GeneID:832055
            KEGG:ath:AT5G19350 TAIR:At5g19350 HOGENOM:HOG000186228
            InParanoid:Q8VXZ9 OMA:NGTQMPG PhylomeDB:Q8VXZ9
            ProtClustDB:CLSN2693583 Genevestigator:Q8VXZ9 Uniprot:Q8VXZ9
        Length = 425

 Score = 152 (58.6 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 31/75 (41%), Positives = 45/75 (60%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIE-VKVICDRVTGQSRGYGFVKFASEAA 80
             DA     +F+G L+ D  + +L++ F  H   +   KV+ D  TG+S+GYGFVKFA E+ 
Sbjct:   111 DAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESE 170

Query:    81 AGEAIKEMDGLVCRT 95
                A+ EM+GL C T
Sbjct:   171 RNRAMAEMNGLYCST 185

 Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 30/65 (46%), Positives = 42/65 (64%)

Query:    26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             RT L+IG L Y  +E  L   F Q GE++ VKVI +++TGQ  GYGF++F S AAA   +
Sbjct:    24 RT-LWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82

Query:    86 KEMDG 90
             +  +G
Sbjct:    83 QTYNG 87

 Score = 103 (41.3 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             T + +  L  +  E  LK AF Q GE+I VK+        ++GYG+V+F +  +A EA++
Sbjct:   237 TTISVANLDQNVTEEELKKAFSQLGEVIYVKIPA------TKGYGYVQFKTRPSAEEAVQ 290

Query:    87 EMDGLV 92
              M G V
Sbjct:   291 RMQGQV 296


>UNIPROTKB|E2R228 [details] [associations]
            symbol:E2R228 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AAEX03026350
            Ensembl:ENSCAFT00000025375 OMA:SDVEYRC Uniprot:E2R228
        Length = 149

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/62 (45%), Positives = 42/62 (67%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LF+GGL+++TNE  L+D F   G I EV V+ DR T +SRG+ F+ F +   A +A++ M
Sbjct:     8 LFLGGLNFNTNEQALEDHFSSFGPISEVVVVKDRETQRSRGFCFITFTNPEHASDAMRPM 67

Query:    89 DG 90
             +G
Sbjct:    68 NG 69


>TAIR|locus:2206850 [details] [associations]
            symbol:AT1G73530 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P09651 EMBL:AC012396
            EMBL:BT021981 EMBL:BT028910 IPI:IPI00543837 PIR:A96762
            RefSeq:NP_177494.1 UniGene:At.34984 ProteinModelPortal:Q9FX45
            SMR:Q9FX45 STRING:Q9FX45 PRIDE:Q9FX45 EnsemblPlants:AT1G73530.1
            GeneID:843687 KEGG:ath:AT1G73530 TAIR:At1g73530 eggNOG:NOG302687
            HOGENOM:HOG000152583 InParanoid:Q9FX45 OMA:FRTTEDT PhylomeDB:Q9FX45
            ProtClustDB:CLSN2914346 Genevestigator:Q9FX45 Uniprot:Q9FX45
        Length = 181

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 25/70 (35%), Positives = 45/70 (64%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S +  +TKL++ GLS+ T E  L+D F Q G +I + ++ D+V  + +G+ F+++ +E  
Sbjct:    71 SSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEE 130

Query:    81 AGEAIKEMDG 90
             A +AI+ M G
Sbjct:   131 AMKAIQGMHG 140


>TAIR|locus:2049721 [details] [associations]
            symbol:AT2G37220 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009409
            "response to cold" evidence=IEP;RCA] [GO:0010319 "stromule"
            evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=IEP] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
            incompatible interaction" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0042742 "defense
            response to bacterium" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0008266 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AC005896
            GO:GO:0030529 GO:GO:0009535 GO:GO:0010319 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AC006260 KO:K11294 EMBL:AF370167
            EMBL:AY048251 EMBL:AY059129 IPI:IPI00540246 PIR:A84790
            RefSeq:NP_181259.1 UniGene:At.25300 ProteinModelPortal:Q9ZUU4
            SMR:Q9ZUU4 IntAct:Q9ZUU4 STRING:Q9ZUU4 SWISS-2DPAGE:Q9ZUU4
            PaxDb:Q9ZUU4 PRIDE:Q9ZUU4 ProMEX:Q9ZUU4 EnsemblPlants:AT2G37220.1
            GeneID:818299 KEGG:ath:AT2G37220 GeneFarm:4058 TAIR:At2g37220
            InParanoid:Q9ZUU4 OMA:PFNVDSA PhylomeDB:Q9ZUU4
            ProtClustDB:CLSN2684922 Genevestigator:Q9ZUU4 GermOnline:AT2G37220
            Uniprot:Q9ZUU4
        Length = 289

 Score = 147 (56.8 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 26/70 (37%), Positives = 45/70 (64%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A S  ++++G LS+  ++  L+  F + G+++E +VI DR +G+S+G+GFV + S   
Sbjct:   198 SGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257

Query:    81 AGEAIKEMDG 90
                AIK +DG
Sbjct:   258 VQNAIKSLDG 267

 Score = 118 (46.6 bits), Expect = 8.9e-07, P = 8.9e-07
 Identities = 23/63 (36%), Positives = 38/63 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+G L ++ +   L   F   G +  V+VI D++TG+SRG+GFV  +S +    A ++
Sbjct:    92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151

Query:    88 MDG 90
              +G
Sbjct:   152 FNG 154


>TAIR|locus:2196521 [details] [associations]
            symbol:AT1G22330 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:AC068562 EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:P09651 HOGENOM:HOG000276232
            ProtClustDB:CLSN2689288 IPI:IPI00540466 PIR:B86356
            RefSeq:NP_564168.2 UniGene:At.41608 ProteinModelPortal:Q9LME7
            SMR:Q9LME7 STRING:Q9LME7 PRIDE:Q9LME7 EnsemblPlants:AT1G22330.1
            GeneID:838839 KEGG:ath:AT1G22330 TAIR:At1g22330 InParanoid:Q9LME7
            OMA:TESHAPQ PhylomeDB:Q9LME7 Genevestigator:Q9LME7 Uniprot:Q9LME7
        Length = 291

 Score = 147 (56.8 bits), Expect = 5.3e-10, P = 5.3e-10
 Identities = 28/81 (34%), Positives = 50/81 (61%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             + TK+F+GGL+++T    ++  F Q GEI+E  +I D+ TG+S+GYGFV F    +A  A
Sbjct:    15 THTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGFVTFRDSDSATRA 74

Query:    85 IKEMDGLVCRTSKDTDMLSTG 105
             + + + ++     + ++ S G
Sbjct:    75 VADPNPVIDGRKANCNIASFG 95


>UNIPROTKB|Q8N7X1 [details] [associations]
            symbol:RBMXL3 "RNA-binding motif protein, X-linked-like-3"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL589786 EMBL:AK301904 EMBL:AK097568 IPI:IPI00167369
            RefSeq:NP_001138818.1 UniGene:Hs.376008 ProteinModelPortal:Q8N7X1
            SMR:Q8N7X1 PhosphoSite:Q8N7X1 PaxDb:Q8N7X1 PRIDE:Q8N7X1
            Ensembl:ENST00000424776 GeneID:139804 KEGG:hsa:139804
            UCSC:uc011mte.1 CTD:139804 GeneCards:GC0XP114423 HGNC:HGNC:26859
            neXtProt:NX_Q8N7X1 PharmGKB:PA164725338 eggNOG:NOG331461
            HOGENOM:HOG000112105 InParanoid:Q8N7X1 OMA:YEEYRGR
            OrthoDB:EOG4ZPDV2 GenomeRNAi:139804 NextBio:84044 Bgee:Q8N7X1
            CleanEx:HS_CXorf55 Genevestigator:Q8N7X1 Uniprot:Q8N7X1
        Length = 1067

 Score = 156 (60.0 bits), Expect = 5.6e-10, P = 5.6e-10
 Identities = 33/71 (46%), Positives = 48/71 (67%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             + +A+   KLFIGGL+  T+E  LK  FG++G II+V ++ DR T +SRG+ FV F S A
Sbjct:     1 MMEADRPEKLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPA 60

Query:    80 AAGEAIKEMDG 90
              A  A ++M+G
Sbjct:    61 DAKAAARDMNG 71


>SGD|S000005483 [details] [associations]
            symbol:HRP1 "Subunit of cleavage factor I" species:4932
            "Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA]
            [GO:0005849 "mRNA cleavage factor complex" evidence=IPI]
            [GO:0006379 "mRNA cleavage" evidence=IDA] [GO:0003729 "mRNA
            binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 SGD:S000005483
            EMBL:BK006948 GO:GO:0000184 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0010494 eggNOG:COG0724
            GO:GO:0006379 GO:GO:0005849 KO:K14411 GeneTree:ENSGT00700000104255
            EMBL:U35737 EMBL:U38535 EMBL:X95258 EMBL:Z74865 PIR:S66820
            RefSeq:NP_014518.1 PDB:2CJK PDB:2KM8 PDBsum:2CJK PDBsum:2KM8
            ProteinModelPortal:Q99383 SMR:Q99383 DIP:DIP-1371N IntAct:Q99383
            MINT:MINT-395353 STRING:Q99383 PaxDb:Q99383 PeptideAtlas:Q99383
            EnsemblFungi:YOL123W GeneID:853997 KEGG:sce:YOL123W CYGD:YOL123w
            HOGENOM:HOG000248803 OMA:AREEQDK OrthoDB:EOG4TF3VC
            EvolutionaryTrace:Q99383 NextBio:975491 Genevestigator:Q99383
            GermOnline:YOL123W Uniprot:Q99383
        Length = 534

 Score = 152 (58.6 bits), Expect = 5.7e-10, P = 5.7e-10
 Identities = 28/68 (41%), Positives = 47/68 (69%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGL++DT E  L++ FG++G + ++K++ D  TG+SRG+GF+ F   ++  E +K 
Sbjct:   160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219

Query:    88 ---MDGLV 92
                +DG V
Sbjct:   220 QHILDGKV 227

 Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    22 DANSRT-KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             D   +T K+F+GG+  D      ++ F Q G II+ +++ D+ TGQSRG+GFV + S  A
Sbjct:   237 DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADA 296


>ASPGD|ASPL0000061196 [details] [associations]
            symbol:AN10164 species:162425 "Emericella nidulans"
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:BN001308 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:C8VTL0 EnsemblFungi:CADANIAT00001543 OMA:QNTNPIP
            Uniprot:C8VTL0
        Length = 477

 Score = 151 (58.2 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 30/69 (43%), Positives = 42/69 (60%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             D ++   +F+G LS + N+ VL  AF   G + E +V+ D  TG+SRGYGFV F   A A
Sbjct:   177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 236

Query:    82 GEAIKEMDG 90
              +A+  MDG
Sbjct:   237 EKALTSMDG 245

 Score = 113 (44.8 bits), Expect = 7.6e-06, P = 7.6e-06
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query:    18 RLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDR-VTGQSRGYGFVKFA 76
             R   + N R  L++GGL     E +LK  F   G +I VK+I D+    +   YGFV+F 
Sbjct:    82 RAAPEPNKRA-LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFD 140

Query:    77 SEAAAGEAIKEMDG 90
                AA  A++ ++G
Sbjct:   141 DPGAAERAMQTLNG 154


>TAIR|locus:2164042 [details] [associations]
            symbol:AT5G53680 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 EMBL:AB017066
            HSSP:Q61474 IPI:IPI00517619 RefSeq:NP_200179.1 UniGene:At.55530
            ProteinModelPortal:Q9FI08 SMR:Q9FI08 EnsemblPlants:AT5G53680.1
            GeneID:835449 KEGG:ath:AT5G53680 TAIR:At5g53680
            HOGENOM:HOG000152479 InParanoid:Q9FI08 PhylomeDB:Q9FI08
            ProtClustDB:CLSN2916322 Genevestigator:Q9FI08 Uniprot:Q9FI08
        Length = 169

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 28/61 (45%), Positives = 40/61 (65%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+++GGL + T +  L + F + GEII V V+CDR T +S+GYGFV F    +A  A K
Sbjct:    13 TKIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACK 72

Query:    87 E 87
             +
Sbjct:    73 D 73


>TAIR|locus:2119505 [details] [associations]
            symbol:AT4G13860 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 HOGENOM:HOG000276232
            UniGene:At.33330 EMBL:BT014844 IPI:IPI00523584 RefSeq:NP_193122.2
            ProteinModelPortal:Q6ID29 SMR:Q6ID29 PRIDE:Q6ID29
            EnsemblPlants:AT4G13860.1 GeneID:827020 KEGG:ath:AT4G13860
            TAIR:At4g13860 InParanoid:Q6ID29 OMA:KIEEMFL PhylomeDB:Q6ID29
            Genevestigator:Q6ID29 Uniprot:Q6ID29
        Length = 87

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 25/64 (39%), Positives = 44/64 (68%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             T++++G LS  T + +L++AF  +G +++  V+ DR T +SRG+GFV ++S + A  A+ 
Sbjct:     3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62

Query:    87 EMDG 90
              MDG
Sbjct:    63 GMDG 66


>TAIR|locus:504955752 [details] [associations]
            symbol:AT3G13224 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441 HSSP:Q14103
            KO:K12741 OMA:HAINGHH EMBL:AP002042 EMBL:AY080630 EMBL:AY123003
            EMBL:AK221448 IPI:IPI00534312 RefSeq:NP_683559.2 UniGene:At.27259
            ProteinModelPortal:Q9LHL2 SMR:Q9LHL2 IntAct:Q9LHL2 PRIDE:Q9LHL2
            EnsemblPlants:AT3G13224.2 GeneID:820515 KEGG:ath:AT3G13224
            TAIR:At3g13224 InParanoid:Q9LHL2 PhylomeDB:Q9LHL2
            ProtClustDB:CLSN2918087 Genevestigator:Q9LHL2 Uniprot:Q9LHL2
        Length = 358

 Score = 147 (56.8 bits), Expect = 9.3e-10, P = 9.3e-10
 Identities = 29/66 (43%), Positives = 41/66 (62%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             D  S  K+FIGGL  DT  TV    FG++GEI +  ++ DR TGQ RG+GF+ FA  +  
Sbjct:    14 DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query:    82 GEAIKE 87
              + I++
Sbjct:    74 DKVIED 79

 Score = 129 (50.5 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GG+     E  LKD F ++G ++E +VI D  T +SRG+GFV F SE    E + +
Sbjct:   110 KIFVGGIPSTVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSK 169


>TAIR|locus:2050992 [details] [associations]
            symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
            ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
            IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
            ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
            PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
            KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
            PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
            Uniprot:O22791
        Length = 404

 Score = 148 (57.2 bits), Expect = 9.3e-10, P = 9.3e-10
 Identities = 25/60 (41%), Positives = 43/60 (71%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLFIGG+S+DT+E +L++ F   GE+++V V+ ++ TG+ RG+GFV F+  A     +++
Sbjct:     7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66

 Score = 99 (39.9 bits), Expect = 0.00019, P = 0.00019
 Identities = 22/59 (37%), Positives = 33/59 (55%)

Query:    21 SDANSRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             S AN RTK +F+GGL         +  F  +G + +  ++ D+ T + RG+GFV F SE
Sbjct:   103 SGANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSE 161


>TAIR|locus:2086325 [details] [associations]
            symbol:AT3G15010 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009693
            GO:GO:0006952 GO:GO:0005730 GO:GO:0000166 GO:GO:0008219
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0010150 EMBL:AP000370
            HSSP:P09651 KO:K12741 eggNOG:NOG300400 EMBL:AY063846 EMBL:AY091228
            EMBL:AK316731 IPI:IPI00519744 RefSeq:NP_188119.1 RefSeq:NP_974317.1
            UniGene:At.27179 ProteinModelPortal:Q9LKA4 SMR:Q9LKA4 IntAct:Q9LKA4
            PaxDb:Q9LKA4 PRIDE:Q9LKA4 EnsemblPlants:AT3G15010.1
            EnsemblPlants:AT3G15010.2 GeneID:820730 KEGG:ath:AT3G15010
            TAIR:At3g15010 HOGENOM:HOG000090575 InParanoid:Q9LKA4 OMA:MGAQYGG
            PhylomeDB:Q9LKA4 ProtClustDB:CLSN2685088 ArrayExpress:Q9LKA4
            Genevestigator:Q9LKA4 Uniprot:Q9LKA4
        Length = 404

 Score = 148 (57.2 bits), Expect = 9.3e-10, P = 9.3e-10
 Identities = 39/93 (41%), Positives = 54/93 (58%)

Query:     8 VRFSHSVRFTRLLSDAN-SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQ 66
             VR    +   RL +D++ S+ KLFI GL+ DT    L+  F  +G++ E  VI D+VTG+
Sbjct:    55 VRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGK 114

Query:    67 SRGYGFVKFASEAAAGEAIKE----MDGLVCRT 95
             S+GYGFV F     A  A+KE    +DG V  T
Sbjct:   115 SKGYGFVTFMHVDGALLALKEPSKKIDGRVTVT 147


>UNIPROTKB|D6RAF8 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956 Pfam:PF08143
            IPI:IPI00965952 ProteinModelPortal:D6RAF8 SMR:D6RAF8
            Ensembl:ENST00000507010 ArrayExpress:D6RAF8 Bgee:D6RAF8
            Uniprot:D6RAF8
        Length = 221

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159


>WB|WBGene00011156 [details] [associations]
            symbol:R09B3.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000276232
            GeneTree:ENSGT00550000074641 EMBL:Z81108 HSSP:P33240 PIR:T24068
            RefSeq:NP_493023.1 ProteinModelPortal:O45713 SMR:O45713
            IntAct:O45713 STRING:O45713 PaxDb:O45713 EnsemblMetazoa:R09B3.3
            GeneID:173071 KEGG:cel:CELE_R09B3.3 UCSC:R09B3.3 CTD:173071
            WormBase:R09B3.3 InParanoid:O45713 OMA:KRVHIPT NextBio:878159
            Uniprot:O45713
        Length = 85

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +++G   + T E  L + F Q G +  V+++CDR TG+ RG+ FV+F  EAAA  A+ + 
Sbjct:     6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65

Query:    89 DGL 91
             +G+
Sbjct:    66 NGV 68


>UNIPROTKB|O45713 [details] [associations]
            symbol:R09B3.3 "Protein R09B3.3" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00550000074641 EMBL:Z81108
            HSSP:P33240 PIR:T24068 RefSeq:NP_493023.1 ProteinModelPortal:O45713
            SMR:O45713 IntAct:O45713 STRING:O45713 PaxDb:O45713
            EnsemblMetazoa:R09B3.3 GeneID:173071 KEGG:cel:CELE_R09B3.3
            UCSC:R09B3.3 CTD:173071 WormBase:R09B3.3 InParanoid:O45713
            OMA:KRVHIPT NextBio:878159 Uniprot:O45713
        Length = 85

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +++G   + T E  L + F Q G +  V+++CDR TG+ RG+ FV+F  EAAA  A+ + 
Sbjct:     6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65

Query:    89 DGL 91
             +G+
Sbjct:    66 NGV 68


>CGD|CAL0005232 [details] [associations]
            symbol:orf19.6090 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 CGD:CAL0005232 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0044011
            eggNOG:COG0724 KO:K11294 RefSeq:XP_718946.1 RefSeq:XP_719050.1
            ProteinModelPortal:Q5AB84 STRING:Q5AB84 GeneID:3639341
            GeneID:3639464 KEGG:cal:CaO19.13509 KEGG:cal:CaO19.6090
            Uniprot:Q5AB84
        Length = 400

 Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 31/80 (38%), Positives = 50/80 (62%)

Query:    11 SHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGY 70
             S  V+ ++  +       LF+G LS++ ++  LK  F   G +I  +VI +R TG+SRGY
Sbjct:   152 SAPVKKSKPAASTEEPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGY 211

Query:    71 GFVKFASEAAAGEAIKEMDG 90
             G+V F S++AA +A++EM G
Sbjct:   212 GYVDFESKSAAEKALEEMQG 231

 Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/62 (38%), Positives = 39/62 (62%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LFIG LS++ N   L + FG++G +I  +V     T Q +G+G+V+F+S   A  A++ M
Sbjct:   272 LFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAM 331

Query:    89 DG 90
             +G
Sbjct:   332 NG 333


>UNIPROTKB|Q5AB84 [details] [associations]
            symbol:NSR1 "Potential nuclear localization sequence
            binding protein Nsr1p" species:237561 "Candida albicans SC5314"
            [GO:0044011 "single-species biofilm formation on inanimate
            substrate" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 CGD:CAL0005232
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AACQ01000036
            EMBL:AACQ01000035 GO:GO:0044011 eggNOG:COG0724 KO:K11294
            RefSeq:XP_718946.1 RefSeq:XP_719050.1 ProteinModelPortal:Q5AB84
            STRING:Q5AB84 GeneID:3639341 GeneID:3639464 KEGG:cal:CaO19.13509
            KEGG:cal:CaO19.6090 Uniprot:Q5AB84
        Length = 400

 Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 31/80 (38%), Positives = 50/80 (62%)

Query:    11 SHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGY 70
             S  V+ ++  +       LF+G LS++ ++  LK  F   G +I  +VI +R TG+SRGY
Sbjct:   152 SAPVKKSKPAASTEEPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGY 211

Query:    71 GFVKFASEAAAGEAIKEMDG 90
             G+V F S++AA +A++EM G
Sbjct:   212 GYVDFESKSAAEKALEEMQG 231

 Score = 117 (46.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/62 (38%), Positives = 39/62 (62%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LFIG LS++ N   L + FG++G +I  +V     T Q +G+G+V+F+S   A  A++ M
Sbjct:   272 LFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAALEAM 331

Query:    89 DG 90
             +G
Sbjct:   332 NG 333


>UNIPROTKB|H0YA96 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000514671 Uniprot:H0YA96
        Length = 210

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + +
Sbjct:     2 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 61

Query:    88 MD 89
              +
Sbjct:    62 KE 63

 Score = 107 (42.7 bits), Expect = 6.5e-06, P = 6.5e-06
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:    87 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 137


>UNIPROTKB|D6RBQ9 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOGENOM:HOG000234441 EMBL:AC124016 HGNC:HGNC:5036 ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 IPI:IPI00963980
            ProteinModelPortal:D6RBQ9 SMR:D6RBQ9 Ensembl:ENST00000503822
            ArrayExpress:D6RBQ9 Bgee:D6RBQ9 Uniprot:D6RBQ9
        Length = 155

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + +
Sbjct:    79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138

Query:    88 MD 89
              +
Sbjct:   139 KE 140


>WB|WBGene00011155 [details] [associations]
            symbol:R09B3.2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 GeneTree:ENSGT00550000074641 EMBL:Z81108
            HSSP:P33240 PIR:T24067 RefSeq:NP_493022.1 ProteinModelPortal:O45712
            SMR:O45712 DIP:DIP-25840N MINT:MINT-1057569 STRING:O45712
            PaxDb:O45712 EnsemblMetazoa:R09B3.2 GeneID:173070
            KEGG:cel:CELE_R09B3.2 UCSC:R09B3.2 CTD:173070 WormBase:R09B3.2
            InParanoid:O45712 OMA:NINEARP NextBio:878155 Uniprot:O45712
        Length = 83

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 23/62 (37%), Positives = 41/62 (66%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +++G   + T E  L + F   G+I  V+++CDR TG+ RG+ F++FA E +A  A+++M
Sbjct:     7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66

Query:    89 DG 90
             +G
Sbjct:    67 NG 68


>TAIR|locus:2037633 [details] [associations]
            symbol:RBP1 "RNA-binding protein 1" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0008283 "cell proliferation" evidence=TAS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0000166 GO:GO:0008283
            GO:GO:0003727 Gene3D:3.30.70.330 EMBL:AB077822 KO:K14411
            EMBL:AC082643 HSSP:Q61474 EMBL:AY054536 EMBL:AY064643
            IPI:IPI00548887 PIR:F96618 RefSeq:NP_176143.1 UniGene:At.17236
            ProteinModelPortal:Q9C652 SMR:Q9C652 IntAct:Q9C652 STRING:Q9C652
            PRIDE:Q9C652 EnsemblPlants:AT1G58470.1 GeneID:842216
            KEGG:ath:AT1G58470 TAIR:At1g58470 InParanoid:Q9C652 OMA:VTYDSED
            PhylomeDB:Q9C652 ProtClustDB:CLSN2914680 Genevestigator:Q9C652
            Uniprot:Q9C652
        Length = 360

 Score = 145 (56.1 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 25/62 (40%), Positives = 45/62 (72%)

Query:    26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             R KLF+GG++ +T+E  LK  F ++G ++E  V  ++VTG+ RG+GFV+FA++    +A+
Sbjct:     5 RYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKAL 64

Query:    86 KE 87
             ++
Sbjct:    65 RD 66

 Score = 118 (46.6 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 31/79 (39%), Positives = 44/79 (55%)

Query:     1 MQWLNGSVRFSHSVRFTRLLSDANSRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVI 59
             +Q +NG +R   S       +   SRTK +F+GGLS +T E   K  F + G   +V V+
Sbjct:   100 VQQMNGGLREMSS-------NGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVM 152

Query:    60 CDRVTGQSRGYGFVKFASE 78
              D VT + RG+GFV + SE
Sbjct:   153 HDGVTNRPRGFGFVTYDSE 171


>UNIPROTKB|Q48A10 [details] [associations]
            symbol:CPS_0338 "RNA-binding protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            eggNOG:COG0724 RefSeq:YP_267104.1 ProteinModelPortal:Q48A10
            STRING:Q48A10 GeneID:3519770 KEGG:cps:CPS_0338 PATRIC:21464063
            HOGENOM:HOG000269562 BioCyc:CPSY167879:GI48-441-MONOMER
            Uniprot:Q48A10
        Length = 160

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 27/72 (37%), Positives = 45/72 (62%)

Query:     7 SVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQ 66
             S   + S     + SD + RT L++G L Y  NET +++ F +HG +  V+++ D+ TG+
Sbjct:    52 STNTASSTSSNTIASDEDVRT-LYVGNLPYRANETSVRELFSEHGSVHSVRLMKDKHTGK 110

Query:    67 SRGYGFVKFASE 78
              RG+GFV+ AS+
Sbjct:   111 RRGFGFVEMASD 122


>TIGR_CMR|CPS_0338 [details] [associations]
            symbol:CPS_0338 "RNA-binding protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0724
            RefSeq:YP_267104.1 ProteinModelPortal:Q48A10 STRING:Q48A10
            GeneID:3519770 KEGG:cps:CPS_0338 PATRIC:21464063
            HOGENOM:HOG000269562 BioCyc:CPSY167879:GI48-441-MONOMER
            Uniprot:Q48A10
        Length = 160

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 27/72 (37%), Positives = 45/72 (62%)

Query:     7 SVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQ 66
             S   + S     + SD + RT L++G L Y  NET +++ F +HG +  V+++ D+ TG+
Sbjct:    52 STNTASSTSSNTIASDEDVRT-LYVGNLPYRANETSVRELFSEHGSVHSVRLMKDKHTGK 110

Query:    67 SRGYGFVKFASE 78
              RG+GFV+ AS+
Sbjct:   111 RRGFGFVEMASD 122


>TAIR|locus:2032120 [details] [associations]
            symbol:AT1G78260 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HSSP:P09651 HOGENOM:HOG000276232 eggNOG:NOG248750 EMBL:AY084982
            EMBL:BT030002 IPI:IPI00529893 RefSeq:NP_565175.1 UniGene:At.43623
            ProteinModelPortal:Q8LF90 SMR:Q8LF90 STRING:Q8LF90
            EnsemblPlants:AT1G78260.1 GeneID:844161 KEGG:ath:AT1G78260
            TAIR:At1g78260 InParanoid:Q8LF90 OMA:SPYYYGY PhylomeDB:Q8LF90
            ProtClustDB:CLSN2689288 Genevestigator:Q8LF90 Uniprot:Q8LF90
        Length = 287

 Score = 142 (55.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 28/79 (35%), Positives = 49/79 (62%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TK+F+GGL+++T    ++  F Q GEI+E  +I D+ TG+S+GYGFV F    +A  A+ 
Sbjct:    17 TKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVA 76

Query:    87 EMDGLVCRTSKDTDMLSTG 105
             + + ++     + ++ S G
Sbjct:    77 DPNPVIDGRKANCNIASFG 95


>TAIR|locus:2157702 [details] [associations]
            symbol:CP31B "chloroplast RNA-binding protein 31B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
            evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0009451 "RNA modification"
            evidence=IMP] [GO:0000023 "maltose metabolic process" evidence=RCA]
            [GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0009409
            "response to cold" evidence=RCA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
            incompatible interaction" evidence=RCA] [GO:0010027 "thylakoid
            membrane organization" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
            diphosphate biosynthetic process, mevalonate-independent pathway"
            evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AB024031
            eggNOG:COG0724 GO:GO:0009451 HOGENOM:HOG000276232 HSSP:P11940
            ProtClustDB:CLSN2915857 UniGene:At.46085 UniGene:At.7917
            EMBL:AY039868 EMBL:AY077660 IPI:IPI00537317 RefSeq:NP_199836.1
            ProteinModelPortal:Q9FGS0 SMR:Q9FGS0 STRING:Q9FGS0 PaxDb:Q9FGS0
            PRIDE:Q9FGS0 EnsemblPlants:AT5G50250.1 GeneID:835090
            KEGG:ath:AT5G50250 TAIR:At5g50250 InParanoid:Q9FGS0 OMA:AAFRIYV
            PhylomeDB:Q9FGS0 Genevestigator:Q9FGS0 Uniprot:Q9FGS0
        Length = 289

 Score = 142 (55.0 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 23/63 (36%), Positives = 43/63 (68%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++++G L +D +   L+  F +HG++++ +V+ DR TG+SRG+GFV+ ++E     AI  
Sbjct:   208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267

Query:    88 MDG 90
             +DG
Sbjct:   268 LDG 270

 Score = 109 (43.4 bits), Expect = 8.8e-06, P = 8.8e-06
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+G L YD +   L   F Q G +   +VI +R T QSRG+GFV  ++   A +A+++
Sbjct:   114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 173

Query:    88 MD 89
              +
Sbjct:   174 FN 175


>MGI|MGI:101947 [details] [associations]
            symbol:Hnrnpd "heterogeneous nuclear ribonucleoprotein D"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042162
            "telomeric DNA binding" evidence=ISO] [GO:0043488 "regulation of
            mRNA stability" evidence=IMP] [GO:0048255 "mRNA stabilization"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:101947 GO:GO:0005829
            GO:GO:0005634 GO:GO:0006355 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0006351 GO:GO:0003723 GO:GO:0048255 GO:GO:0030529
            GO:GO:0043488 GO:GO:0042162 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ ChiTaRS:HNRNPD
            InterPro:IPR012956 Pfam:PF08143 EMBL:U11273 EMBL:U11274
            EMBL:BC011172 EMBL:BC049098 IPI:IPI00230086 IPI:IPI00330958
            IPI:IPI00336873 IPI:IPI00336874 PIR:I49069 PIR:I49070
            RefSeq:NP_001070733.1 RefSeq:NP_001070734.1 RefSeq:NP_001070735.1
            RefSeq:NP_031542.2 UniGene:Mm.150231 ProteinModelPortal:Q60668
            SMR:Q60668 DIP:DIP-31411N IntAct:Q60668 STRING:Q60668
            PhosphoSite:Q60668 PaxDb:Q60668 PRIDE:Q60668
            Ensembl:ENSMUST00000019128 Ensembl:ENSMUST00000172361 GeneID:11991
            KEGG:mmu:11991 UCSC:uc008ygt.1 UCSC:uc008ygu.1 InParanoid:Q60668
            NextBio:280159 Bgee:Q60668 Genevestigator:Q60668
            GermOnline:ENSMUSG00000000568 Uniprot:Q60668
        Length = 355

 Score = 144 (55.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 28/77 (36%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R T   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHTEAAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 233


>UNIPROTKB|I3LB68 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:FP325262 RefSeq:NP_001231435.1
            UniGene:Ssc.1299 Ensembl:ENSSSCT00000023438 GeneID:100625005
            KEGG:ssc:100625005 Uniprot:I3LB68
        Length = 406

 Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A+   KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF     
Sbjct:     4 SGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63

Query:    81 AGEAI 85
              G  +
Sbjct:    64 VGTVL 68

 Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>UNIPROTKB|E2R6E4 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 CTD:26528 KO:K14411 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AAEX03012650 EMBL:AAEX03012651
            RefSeq:XP_003432858.1 Ensembl:ENSCAFT00000031038 GeneID:100683271
            KEGG:cfa:100683271 Uniprot:E2R6E4
        Length = 407

 Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A+   KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF     
Sbjct:     4 SGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63

Query:    81 AGEAI 85
              G  +
Sbjct:    64 VGTVL 68

 Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>UNIPROTKB|Q96EP5 [details] [associations]
            symbol:DAZAP1 "DAZ-associated protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 eggNOG:COG0724 EMBL:AF181719 EMBL:BC012062
            EMBL:AK056850 IPI:IPI00165230 IPI:IPI00335930 RefSeq:NP_061832.2
            RefSeq:NP_733829.1 UniGene:Hs.222510 PDB:2DGS PDB:2DH8 PDBsum:2DGS
            PDBsum:2DH8 ProteinModelPortal:Q96EP5 SMR:Q96EP5 IntAct:Q96EP5
            STRING:Q96EP5 PhosphoSite:Q96EP5 DMDM:44887869
            REPRODUCTION-2DPAGE:IPI00165230 PaxDb:Q96EP5 PRIDE:Q96EP5
            DNASU:26528 Ensembl:ENST00000233078 Ensembl:ENST00000336761
            GeneID:26528 KEGG:hsa:26528 UCSC:uc002lsm.3 UCSC:uc002lsn.3
            CTD:26528 GeneCards:GC19P001407 HGNC:HGNC:2683 HPA:HPA004201
            HPA:HPA004631 MIM:607430 neXtProt:NX_Q96EP5 PharmGKB:PA27153
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 InParanoid:Q96EP5 KO:K14411
            OMA:HNLDGRN OrthoDB:EOG40ZQXT PhylomeDB:Q96EP5 ChiTaRS:DAZAP1
            EvolutionaryTrace:Q96EP5 GenomeRNAi:26528 NextBio:48864
            ArrayExpress:Q96EP5 Bgee:Q96EP5 CleanEx:HS_DAZAP1
            Genevestigator:Q96EP5 GermOnline:ENSG00000071626 Uniprot:Q96EP5
        Length = 407

 Score = 145 (56.1 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 26/65 (40%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             S A+   KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF     
Sbjct:     4 SGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 63

Query:    81 AGEAI 85
              G  +
Sbjct:    64 VGTVL 68

 Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>WB|WBGene00000774 [details] [associations]
            symbol:cpf-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016607 "nuclear speck"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0006898
            GO:GO:0016246 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0000003 GO:GO:0003676 GO:GO:0040027 eggNOG:COG0724 KO:K14407
            InterPro:IPR025742 InterPro:IPR026896 Pfam:PF14327 Pfam:PF14304
            GeneTree:ENSGT00550000074641 HSSP:P33240 EMBL:Z83230 PIR:T22767
            RefSeq:NP_499734.1 ProteinModelPortal:O45577 SMR:O45577
            DIP:DIP-27144N IntAct:O45577 MINT:MINT-1049050 STRING:O45577
            PaxDb:O45577 EnsemblMetazoa:F56A8.6.1 EnsemblMetazoa:F56A8.6.2
            GeneID:176742 KEGG:cel:CELE_F56A8.6 UCSC:F56A8.6.1 CTD:176742
            WormBase:F56A8.6 HOGENOM:HOG000214372 InParanoid:O45577 OMA:VENPYGE
            NextBio:893824 Uniprot:O45577
        Length = 336

 Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 23/66 (34%), Positives = 43/66 (65%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             S+  +F+G +SYD +E  ++  F + G ++ +K++ DR TG+ +GYGF++F     A  A
Sbjct:    16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75

Query:    85 IKEMDG 90
             I+ ++G
Sbjct:    76 IRNLNG 81


>ZFIN|ZDB-GENE-030131-579 [details] [associations]
            symbol:rbmx "RNA binding motif protein, X-linked"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0001047 "core promoter binding" evidence=ISS] [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0005719 "nuclear euchromatin"
            evidence=ISS] [GO:0006509 "membrane protein ectodomain proteolysis"
            evidence=ISS] [GO:0044530 "supraspliceosomal complex" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048025 "negative
            regulation of mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0051260 "protein homooligomerization"
            evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=IEA;ISS] [GO:0003729 "mRNA binding" evidence=ISS]
            [GO:0070062 "extracellular vesicular exosome" evidence=ISS]
            [GO:0071347 "cellular response to interleukin-1" evidence=ISS]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005681
            "spliceosomal complex" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-579
            GO:GO:0007275 GO:GO:0008380 GO:GO:0000166 GO:GO:0070062
            GO:GO:0051260 GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0045944 GO:GO:0003682 GO:GO:0006366 GO:GO:0006509
            GO:GO:0001047 GO:GO:0005719 GO:GO:0071347 GO:GO:0071013
            GO:GO:0048025 eggNOG:COG0724 GO:GO:0048026 GO:GO:0000381
            GO:GO:0044530 HSSP:Q14103 GeneTree:ENSGT00700000104336
            HOGENOM:HOG000276235 HOVERGEN:HBG063314 InterPro:IPR012604
            Pfam:PF08081 EMBL:AJ717349 EMBL:AY394938 EMBL:AL929434
            EMBL:BC049509 EMBL:BC071326 IPI:IPI00509177 RefSeq:NP_997763.1
            UniGene:Dr.76840 ProteinModelPortal:Q7ZWA3 SMR:Q7ZWA3 STRING:Q7ZWA3
            PRIDE:Q7ZWA3 Ensembl:ENSDART00000007927 Ensembl:ENSDART00000131024
            GeneID:321860 KEGG:dre:321860 CTD:27316 InParanoid:Q6TLG7 KO:K12885
            OMA:PFFKGMS OrthoDB:EOG4CNQSK NextBio:20807559 ArrayExpress:Q7ZWA3
            Bgee:Q7ZWA3 Uniprot:Q7ZWA3
        Length = 379

 Score = 144 (55.7 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 30/71 (42%), Positives = 48/71 (67%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +++A+   KLFIGGL+ +T+E VL+  F + G I EV ++ DR T +SRG+ FV + +  
Sbjct:     1 MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPG 60

Query:    80 AAGEAIKEMDG 90
              A +A +EM+G
Sbjct:    61 DAKDAAREMNG 71


>UNIPROTKB|H0Y8G5 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC124016 HGNC:HGNC:5036
            ChiTaRS:HNRNPD Ensembl:ENST00000509263 Bgee:H0Y8G5 Uniprot:H0Y8G5
        Length = 261

 Score = 140 (54.3 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    16 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 75

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:    76 VLFKESESVDKVMDQKE 92

 Score = 107 (42.7 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   116 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 166


>UNIPROTKB|Q8N9W6 [details] [associations]
            symbol:BOLL "Protein boule-like" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008494
            "translation activator activity" evidence=IDA] [GO:0045948
            "positive regulation of translational initiation" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126 "meiosis"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0007126
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 EMBL:CH471063
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0008494
            EMBL:AF272858 EMBL:AM295005 EMBL:AK058099 EMBL:AK093453
            EMBL:AK097795 EMBL:AC011997 EMBL:BC033674 IPI:IPI00056506
            IPI:IPI00377133 IPI:IPI00396276 IPI:IPI00871244 RefSeq:NP_149019.1
            RefSeq:NP_932074.1 UniGene:Hs.169797 ProteinModelPortal:Q8N9W6
            SMR:Q8N9W6 IntAct:Q8N9W6 STRING:Q8N9W6 PhosphoSite:Q8N9W6
            DMDM:44887719 PRIDE:Q8N9W6 DNASU:66037 Ensembl:ENST00000321801
            Ensembl:ENST00000392296 Ensembl:ENST00000433157 GeneID:66037
            KEGG:hsa:66037 UCSC:uc002uur.2 UCSC:uc002uus.2 UCSC:uc002uut.2
            UCSC:uc002uuu.1 CTD:66037 GeneCards:GC02M198591 H-InvDB:HIX0030239
            HGNC:HGNC:14273 HPA:HPA018678 MIM:606165 neXtProt:NX_Q8N9W6
            PharmGKB:PA25397 eggNOG:NOG260394 HOGENOM:HOG000095250
            HOVERGEN:HBG048761 OrthoDB:EOG4MPHQQ GenomeRNAi:66037 NextBio:67546
            ArrayExpress:Q8N9W6 Bgee:Q8N9W6 CleanEx:HS_BOLL
            Genevestigator:Q8N9W6 GermOnline:ENSG00000152430 GO:GO:0045948
            Uniprot:Q8N9W6
        Length = 283

 Score = 141 (54.7 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 27/70 (38%), Positives = 46/70 (65%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE+ L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A + ++E
Sbjct:    34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 92

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:    93 AEKLNYKDKK 102


>UNIPROTKB|G3MY63 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00530000063480 EMBL:DAAA02005516 EMBL:DAAA02005517
            EMBL:DAAA02005518 Ensembl:ENSBTAT00000065390 Uniprot:G3MY63
        Length = 271

 Score = 140 (54.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 27/70 (38%), Positives = 45/70 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A + ++E
Sbjct:    46 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 104

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:   105 AEKLNYKDKK 114


>TAIR|locus:2103670 [details] [associations]
            symbol:UBA2A "UBP1-associated protein 2A" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0017091 "AU-rich element
            binding" evidence=IDA] [GO:0048255 "mRNA stabilization"
            evidence=NAS] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=TAS] [GO:0006952 "defense response" evidence=IMP]
            [GO:0008219 "cell death" evidence=IMP] [GO:0009693 "ethylene
            biosynthetic process" evidence=IMP] [GO:0010150 "leaf senescence"
            evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 EMBL:CP002686
            GO:GO:0009693 GO:GO:0006952 GO:GO:0009738 GO:GO:0000166
            GO:GO:0008219 Gene3D:3.30.70.330 GO:GO:0010150 GO:GO:0017091
            GO:GO:0048255 EMBL:AL390921 HSSP:Q14103 KO:K12741
            ProtClustDB:CLSN2683657 EMBL:AF367280 EMBL:AY037245 EMBL:AY091040
            EMBL:AY117351 EMBL:AY133549 EMBL:BT006368 EMBL:AJ439404
            IPI:IPI00547983 PIR:T51274 RefSeq:NP_001190109.1
            RefSeq:NP_001190110.1 RefSeq:NP_567042.1 RefSeq:NP_850710.1
            RefSeq:NP_850711.1 UniGene:At.9845 SMR:Q9LES2 IntAct:Q9LES2
            STRING:Q9LES2 EnsemblPlants:AT3G56860.1 EnsemblPlants:AT3G56860.2
            EnsemblPlants:AT3G56860.3 EnsemblPlants:AT3G56860.4
            EnsemblPlants:AT3G56860.5 GeneID:824853 KEGG:ath:AT3G56860
            TAIR:At3g56860 InParanoid:Q9LES2 OMA:ADEDPVH Genevestigator:Q9LES2
            Uniprot:Q9LES2
        Length = 478

 Score = 145 (56.1 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 25/60 (41%), Positives = 42/60 (70%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+ GL +DT    L +AF Q+GEI + K + D+++G+S+GYGF+ + S + A  A+K+
Sbjct:   141 KIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQ 200


>TAIR|locus:2122009 [details] [associations]
            symbol:RBP31 "AT4G24770" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA;TAS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0045087 "innate
            immune response" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
            evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
            [GO:0009073 "aromatic amino acid family biosynthetic process"
            evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
            [GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] [GO:0045036
            "protein targeting to chloroplast" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0009631 "cold acclimation" evidence=IMP] [GO:0016553 "base
            conversion or substitution editing" evidence=IMP] [GO:0043489 "RNA
            stabilization" evidence=IMP] [GO:0006396 "RNA processing"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009570 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008266 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 GO:GO:0009631
            GO:GO:0016553 GO:GO:0006396 GO:GO:0030529 EMBL:AL035356
            EMBL:AL161562 GO:GO:0009535 eggNOG:COG0724 HOGENOM:HOG000276232
            EMBL:M94554 EMBL:X65255 EMBL:U08467 EMBL:D31712 EMBL:D31713
            IPI:IPI00523699 IPI:IPI00542634 IPI:IPI00760320 PIR:S28057
            PIR:S53492 RefSeq:NP_194208.1 UniGene:At.38112 UniGene:At.70990
            ProteinModelPortal:Q04836 SMR:Q04836 STRING:Q04836 PaxDb:Q04836
            PRIDE:Q04836 ProMEX:Q04836 EnsemblPlants:AT4G24770.1 GeneID:828579
            KEGG:ath:AT4G24770 GeneFarm:4009 TAIR:At4g24770 InParanoid:Q04836
            OMA:NRYDLNG PhylomeDB:Q04836 ProtClustDB:CLSN2915857
            Genevestigator:Q04836 GermOnline:AT4G24770 GO:GO:0043489
            Uniprot:Q04836
        Length = 329

 Score = 142 (55.0 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 24/63 (38%), Positives = 41/63 (65%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++++G L +D +   L+  F +HG+++E +V+ DR TG+SRG+GFV  +      EAI  
Sbjct:   245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304

Query:    88 MDG 90
             +DG
Sbjct:   305 LDG 307

 Score = 121 (47.7 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query:    22 DANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAA 81
             + +   KLF+G L+YD N   L   F Q G +   +VI +R T QSRG+GFV  +S   A
Sbjct:   145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204

Query:    82 GEAIKEMD 89
               A+++ +
Sbjct:   205 ETAVEKFN 212


>UNIPROTKB|Q9LEB3 [details] [associations]
            symbol:RBP47 "Polyadenylate-binding protein RBP47"
            species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0034605
            "cellular response to heat" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0034605 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0010494 GO:GO:0008143 HSSP:P33240
            EMBL:AJ292768 ProteinModelPortal:Q9LEB3 Uniprot:Q9LEB3
        Length = 428

 Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 27/74 (36%), Positives = 45/74 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFG-QHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             ++  S   +F+G L+ D  +T+L+D F  ++  +   KV+ D  TG S+GYGFV+F  E+
Sbjct:   171 AETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDES 230

Query:    80 AAGEAIKEMDGLVC 93
                 A+ EM+G+ C
Sbjct:   231 ERSRAMTEMNGVYC 244

 Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 28/74 (37%), Positives = 45/74 (60%)

Query:    17 TRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFA 76
             T++ S +     ++IG L    +E+ L   F Q GE+I VK+I ++ TGQS  YGFV+F 
Sbjct:    74 TQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFN 133

Query:    77 SEAAAGEAIKEMDG 90
             + AAA + ++  +G
Sbjct:   134 THAAAEKVLQSYNG 147

 Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query:    21 SDANS-RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             SD +S  T +F+GGL  +  +  L+ +F Q GE++ VK+         +G GFV+F+  +
Sbjct:   288 SDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPA------GKGCGFVQFSDRS 341

Query:    80 AAGEAIKEMDGLVCRTSKDTDMLSTG 105
             +A EAI+++ G +    K    LS G
Sbjct:   342 SAQEAIQKLSGAII--GKQAVRLSWG 365


>UNIPROTKB|G3V6A4 [details] [associations]
            symbol:Hnrpd "Protein Hnrpd" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 RefSeq:NP_001076009.1
            UniGene:Rn.94022 GeneID:79256 KEGG:rno:79256 CTD:79256
            NextBio:614748 EMBL:CH474022 Ensembl:ENSRNOT00000003158
            Uniprot:G3V6A4
        Length = 304

 Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R T   +      K+FIGGLS+DT +  LKD F + G++++  +  D +TG+SRG+GF
Sbjct:    81 SPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   141 VLFKESESVDKVMDQKE 157

 Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 231


>UNIPROTKB|F1NCW4 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 OMA:PNQNWNQ EMBL:AADN02009040
            IPI:IPI00819680 Ensembl:ENSGALT00000038011 ArrayExpress:F1NCW4
            Uniprot:F1NCW4
        Length = 258

 Score = 139 (54.0 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + +
Sbjct:     1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 60

Query:    88 MD 89
              +
Sbjct:    61 KE 62

 Score = 108 (43.1 bits), Expect = 8.8e-06, P = 8.8e-06
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:    86 KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEE 136


>TAIR|locus:2039590 [details] [associations]
            symbol:AT2G27330 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000276232 EMBL:BT025704
            IPI:IPI00525470 RefSeq:NP_565646.2 UniGene:At.38782
            ProteinModelPortal:Q1ECN0 SMR:Q1ECN0 IntAct:Q1ECN0
            EnsemblPlants:AT2G27330.1 GeneID:817276 KEGG:ath:AT2G27330
            TAIR:At2g27330 eggNOG:NOG290837 InParanoid:Q1ECN0 OMA:IMDKIRC
            PhylomeDB:Q1ECN0 ProtClustDB:CLSN2918107 Genevestigator:Q1ECN0
            Uniprot:Q1ECN0
        Length = 116

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 25/74 (33%), Positives = 48/74 (64%)

Query:    16 FTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKF 75
             FT LL   +  + LF+ G+S+ + E  L  AF Q+G++++V VI D++  + +G+ +V F
Sbjct:    10 FTPLLFSRSFSSTLFVKGISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTF 69

Query:    76 ASEAAAGEAIKEMD 89
             +S+  A +A+ E++
Sbjct:    70 SSKEEAEKALLELN 83


>UNIPROTKB|F1PA19 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AAEX03007693 EMBL:AAEX03007694
            Ensembl:ENSCAFT00000000377 OMA:GNDSSYG Uniprot:F1PA19
        Length = 264

 Score = 139 (54.0 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   A+  + +  
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:    61 KEHRLDGRVIDPKK 74

 Score = 96 (38.9 bits), Expect = 0.00020, P = 0.00020
 Identities = 17/60 (28%), Positives = 36/60 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D  + + RG+ F+ F  E    + +++
Sbjct:    85 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK 144


>UNIPROTKB|Q98SJ2 [details] [associations]
            symbol:dazap1 "DAZ-associated protein 1" species:8355
            "Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0003723
            CTD:26528 HOVERGEN:HBG002295 KO:K14411 EMBL:AY028920
            RefSeq:NP_001082088.1 UniGene:Xl.1666 ProteinModelPortal:Q98SJ2
            SMR:Q98SJ2 GeneID:398218 KEGG:xla:398218 Xenbase:XB-GENE-864805
            Uniprot:Q98SJ2
        Length = 360

 Score = 142 (55.0 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68

 Score = 123 (48.4 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query:    24 NSRT-KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             NSR+ K+F+GG+ ++  ET LK+ F + G + EV +I D    + RG+GF+ F  E +  
Sbjct:   110 NSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVD 169

Query:    83 EAI 85
             +A+
Sbjct:   170 QAV 172


>UNIPROTKB|C1JGV6 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:DAAA02005516 EMBL:DAAA02005517 EMBL:DAAA02005518 EMBL:FJ623266
            IPI:IPI00867153 UniGene:Bt.25777 Ensembl:ENSBTAT00000044801
            Uniprot:C1JGV6
        Length = 295

 Score = 140 (54.3 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 27/70 (38%), Positives = 45/70 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A + ++E
Sbjct:    46 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 104

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:   105 AEKLNYKDKK 114


>UNIPROTKB|F1P6I8 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:AAEX03017986 Ensembl:ENSCAFT00000037605 Uniprot:F1P6I8
        Length = 295

 Score = 140 (54.3 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 27/70 (38%), Positives = 45/70 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A + ++E
Sbjct:    46 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 104

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:   105 AEKLNYKDKK 114


>UNIPROTKB|F2Z2G3 [details] [associations]
            symbol:BOLL "Protein boule-like" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC011997
            HGNC:HGNC:14273 IPI:IPI01018166 ProteinModelPortal:F2Z2G3
            SMR:F2Z2G3 Ensembl:ENST00000430004 OMA:YQAPAQC ArrayExpress:F2Z2G3
            Bgee:F2Z2G3 Uniprot:F2Z2G3
        Length = 333

 Score = 141 (54.7 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 27/70 (38%), Positives = 46/70 (65%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE+ L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A + ++E
Sbjct:    34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQKILQE 92

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:    93 AEKLNYKDKK 102


>TAIR|locus:2049339 [details] [associations]
            symbol:AT2G21690 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AC007019 HOGENOM:HOG000276232 EMBL:AC007119
            HSSP:Q14103 IPI:IPI00516548 PIR:B84604 RefSeq:NP_179762.1
            UniGene:At.52858 ProteinModelPortal:Q9SJ28 SMR:Q9SJ28
            EnsemblPlants:AT2G21690.1 GeneID:816707 KEGG:ath:AT2G21690
            TAIR:At2g21690 eggNOG:NOG254172 InParanoid:Q9SJ28 OMA:RSKCVNV
            PhylomeDB:Q9SJ28 ProtClustDB:CLSN2913216 ArrayExpress:Q9SJ28
            Genevestigator:Q9SJ28 Uniprot:Q9SJ28
        Length = 117

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 28/60 (46%), Positives = 38/60 (63%)

Query:    30 FIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMD 89
             F+ GL  DT+E  L D F + G +I+ K+I DR TG+SR +GFV F  E +  +AI  MD
Sbjct:    10 FVRGLDQDTDEKDLTDIFSKFGNVIDSKIIYDRDTGKSRRFGFVTFEEEKSMTDAIMIMD 69


>UNIPROTKB|A5D9H5 [details] [associations]
            symbol:HNRPD "Heterogeneous nuclear ribonucleoprotein D"
            species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 InterPro:IPR012956
            Pfam:PF08143 EMBL:DAAA02018245 EMBL:BT030594 IPI:IPI00905408
            RefSeq:NP_001091533.1 UniGene:Bt.52882 SMR:A5D9H5 STRING:A5D9H5
            Ensembl:ENSBTAT00000056365 GeneID:527471 KEGG:bta:527471
            NextBio:20874604 Uniprot:A5D9H5
        Length = 306

 Score = 140 (54.3 bits), Expect = 3.7e-09, P = 3.7e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159

 Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 233


>UNIPROTKB|D6R9P3 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964686 ProteinModelPortal:D6R9P3
            SMR:D6R9P3 Ensembl:ENST00000515193 ArrayExpress:D6R9P3 Bgee:D6R9P3
            Uniprot:D6R9P3
        Length = 280

 Score = 139 (54.0 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   A+  + +  
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   131 KEHRLDGRVIDPKK 144

 Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D    + RG+ F+ F  E    + +++
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK 214


>MGI|MGI:1922638 [details] [associations]
            symbol:Boll "bol, boule-like (Drosophila)" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0007126
            "meiosis" evidence=ISO] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0045948 "positive regulation of translational initiation"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1922638 GO:GO:0007275
            GO:GO:0005737 GO:GO:0030154 GO:GO:0006417 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 CTD:66037
            eggNOG:NOG260394 HOGENOM:HOG000095250 HOVERGEN:HBG048761
            OrthoDB:EOG4MPHQQ EMBL:AF272859 EMBL:AK016125 EMBL:BY103870
            IPI:IPI00403643 IPI:IPI00886395 RefSeq:NP_001106838.1
            RefSeq:NP_083543.2 UniGene:Mm.483408 ProteinModelPortal:Q924M5
            SMR:Q924M5 STRING:Q924M5 PhosphoSite:Q924M5 PRIDE:Q924M5
            DNASU:75388 Ensembl:ENSMUST00000159398 GeneID:75388 KEGG:mmu:75388
            UCSC:uc007bal.1 UCSC:uc007bam.1 GeneTree:ENSGT00530000063480
            InParanoid:Q924M5 NextBio:342892 Bgee:Q924M5 CleanEx:MM_BOLL
            Genevestigator:Q924M5 GermOnline:ENSMUSG00000025977 Uniprot:Q924M5
        Length = 281

 Score = 139 (54.0 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 26/70 (37%), Positives = 45/70 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGF+ F ++  A + ++E
Sbjct:    34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFITFETQEDAQKILQE 92

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:    93 AEKLNYKDKK 102


>TAIR|locus:2160210 [details] [associations]
            symbol:RBP45A "RNA-binding protein 45A" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 eggNOG:COG0724 EMBL:AB005232 GO:GO:0008143
            HSSP:Q61474 HOGENOM:HOG000186228 EMBL:AF324983 EMBL:BT029545
            IPI:IPI00522054 RefSeq:NP_568815.1 UniGene:At.19141
            ProteinModelPortal:Q9FPJ8 SMR:Q9FPJ8 IntAct:Q9FPJ8 STRING:Q9FPJ8
            PRIDE:Q9FPJ8 EnsemblPlants:AT5G54900.1 GeneID:835581
            KEGG:ath:AT5G54900 TAIR:At5g54900 InParanoid:Q9FPJ8 OMA:EARTLWI
            PhylomeDB:Q9FPJ8 ProtClustDB:CLSN2917762 Genevestigator:Q9FPJ8
            Uniprot:Q9FPJ8
        Length = 387

 Score = 142 (55.0 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 28/68 (41%), Positives = 42/68 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQ-HGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +F+G L+ +  + +L D F   +G +   KV+ DR TG+S+GYGFV+FA E     A+ E
Sbjct:   156 IFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTE 215

Query:    88 MDGLVCRT 95
             M+G  C T
Sbjct:   216 MNGQYCST 223

 Score = 125 (49.1 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 27/81 (33%), Positives = 44/81 (54%)

Query:    23 ANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAG 82
             A+    L+IG L    +E  +   F Q GE    KVI +++TGQS GYGF++F S + A 
Sbjct:    56 ASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAE 115

Query:    83 EAIKEMDGLVCRTSKDTDMLS 103
               ++  +G    +++ T  L+
Sbjct:   116 RVLQTYNGAPMPSTEQTFRLN 136

 Score = 106 (42.4 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 24/70 (34%), Positives = 42/70 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             +D N+ T +F+GGL  +  +  LK  FGQ GE++ VK+         +  GFV++A++A+
Sbjct:   255 NDPNNTT-IFVGGLDANVTDDELKSIFGQFGELLHVKI------PPGKRCGFVQYANKAS 307

Query:    81 AGEAIKEMDG 90
             A  A+  ++G
Sbjct:   308 AEHALSVLNG 317


>UNIPROTKB|D6RD18 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00966854 ProteinModelPortal:D6RD18
            SMR:D6RD18 Ensembl:ENST00000514633 ArrayExpress:D6RD18 Bgee:D6RD18
            Uniprot:D6RD18
        Length = 283

 Score = 139 (54.0 bits), Expect = 3.9e-09, P = 3.9e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   A+  + +  
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   131 KEHRLDGRVIDPKK 144

 Score = 94 (38.1 bits), Expect = 0.00038, P = 0.00038
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D    + RG+ F+ F  E    + +++
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK 214


>UNIPROTKB|E1BAK6 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:DAAA02020260 IPI:IPI00701555 Ensembl:ENSBTAT00000026274
            Uniprot:E1BAK6
        Length = 396

 Score = 142 (55.0 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 58

 Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD +   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:    97 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 156

Query:    81 AGEAI 85
               +A+
Sbjct:   157 VDQAV 161


>UNIPROTKB|F1NTG9 [details] [associations]
            symbol:DAZAP1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:HNLDGRN
            GeneTree:ENSGT00700000104255 EMBL:AADN02058490 IPI:IPI00577519
            Ensembl:ENSGALT00000024525 ArrayExpress:F1NTG9 Uniprot:F1NTG9
        Length = 398

 Score = 142 (55.0 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:     1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 58

 Score = 124 (48.7 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD N   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:    97 SDNNKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 156

Query:    81 AGEAI 85
               +A+
Sbjct:   157 VDQAV 161


>RGD|620365 [details] [associations]
            symbol:Hnrpd "heterogeneous nuclear ribonucleoprotein D"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000291 "nuclear-transcribed mRNA catabolic
            process, exonucleolytic" evidence=TAS] [GO:0003723 "RNA binding"
            evidence=ISO;ISS] [GO:0003729 "mRNA binding" evidence=TAS]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
            evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA;ISO;ISS] [GO:0042162 "telomeric DNA binding"
            evidence=IEA;ISO;ISS] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA;ISO] [GO:0048255 "mRNA stabilization" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620365 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0006913 GO:GO:0048255 GO:GO:0030529
            GO:GO:0042162 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044
            OrthoDB:EOG49W2FZ GermOnline:ENSRNOG00000002292 InterPro:IPR012956
            Pfam:PF08143 EMBL:AB046615 EMBL:AB046616 EMBL:AB046617
            EMBL:AB046618 IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384
            IPI:IPI00231385 RefSeq:NP_001076008.1 RefSeq:NP_001076009.1
            RefSeq:NP_001076010.1 RefSeq:NP_077380.2 UniGene:Rn.94022
            ProteinModelPortal:Q9JJ54 SMR:Q9JJ54 STRING:Q9JJ54
            PhosphoSite:Q9JJ54 PRIDE:Q9JJ54 GeneID:79256 KEGG:rno:79256
            UCSC:RGD:620365 CTD:79256 InParanoid:Q9JJ54 NextBio:614748
            ArrayExpress:Q9JJ54 Genevestigator:Q9JJ54 GO:GO:0000291
            Uniprot:Q9JJ54
        Length = 353

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R T   +      K+FIGGLS+DT +  LKD F + G++++  +  D +TG+SRG+GF
Sbjct:    81 SPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   141 VLFKESESVDKVMDQKE 157

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 231


>UNIPROTKB|Q9JJ54 [details] [associations]
            symbol:Hnrnpd "Heterogeneous nuclear ribonucleoprotein D0"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0005829
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0006913 GO:GO:0048255 GO:GO:0030529 GO:GO:0042162
            HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K13044 OrthoDB:EOG49W2FZ
            GermOnline:ENSRNOG00000002292 InterPro:IPR012956 Pfam:PF08143
            EMBL:AB046615 EMBL:AB046616 EMBL:AB046617 EMBL:AB046618
            IPI:IPI00201032 IPI:IPI00231383 IPI:IPI00231384 IPI:IPI00231385
            RefSeq:NP_001076008.1 RefSeq:NP_001076009.1 RefSeq:NP_001076010.1
            RefSeq:NP_077380.2 UniGene:Rn.94022 ProteinModelPortal:Q9JJ54
            SMR:Q9JJ54 STRING:Q9JJ54 PhosphoSite:Q9JJ54 PRIDE:Q9JJ54
            GeneID:79256 KEGG:rno:79256 UCSC:RGD:620365 CTD:79256
            InParanoid:Q9JJ54 NextBio:614748 ArrayExpress:Q9JJ54
            Genevestigator:Q9JJ54 GO:GO:0000291 Uniprot:Q9JJ54
        Length = 353

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R T   +      K+FIGGLS+DT +  LKD F + G++++  +  D +TG+SRG+GF
Sbjct:    81 SPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGF 140

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   141 VLFKESESVDKVMDQKE 157

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 231


>RGD|1305280 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10116 "Rattus
            norvegicus" [GO:0001893 "maternal placenta development"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0007283 "spermatogenesis"
            evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0005844 "polysome" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305280 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH474029 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            OrthoDB:EOG40ZQXT OMA:GGYDMYN IPI:IPI00365961 EMBL:BC098930
            RefSeq:NP_001020913.1 UniGene:Rn.16769 SMR:Q4KLZ3 GeneID:362836
            KEGG:rno:362836 UCSC:RGD:1305280 InParanoid:Q4KLZ3 NextBio:681451
            Genevestigator:Q4KLZ3 Uniprot:Q4KLZ3
        Length = 405

 Score = 142 (55.0 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68

 Score = 122 (48.0 bits), Expect = 6.2e-07, P = 6.2e-07
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD++   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   106 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 165

Query:    81 AGEAI 85
               +A+
Sbjct:   166 VDQAV 170


>MGI|MGI:1917498 [details] [associations]
            symbol:Dazap1 "DAZ associated protein 1" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001893 "maternal placenta development" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=ISA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0035613 "RNA stem-loop binding"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1917498 GO:GO:0007275
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 eggNOG:COG0724
            CTD:26528 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            ChiTaRS:DAZAP1 EMBL:AF225910 EMBL:BC049355 IPI:IPI00406492
            IPI:IPI00406493 RefSeq:NP_001116076.1 RefSeq:NP_001116077.1
            RefSeq:NP_573451.2 UniGene:Mm.148693 ProteinModelPortal:Q9JII5
            SMR:Q9JII5 STRING:Q9JII5 PhosphoSite:Q9JII5
            REPRODUCTION-2DPAGE:Q9JII5 PaxDb:Q9JII5 PRIDE:Q9JII5
            Ensembl:ENSMUST00000092305 Ensembl:ENSMUST00000105362 GeneID:70248
            KEGG:mmu:70248 UCSC:uc007gcl.2 UCSC:uc007gcm.2
            GeneTree:ENSGT00700000104255 InParanoid:Q9JII5 NextBio:331250
            Bgee:Q9JII5 CleanEx:MM_DAZAP1 Genevestigator:Q9JII5
            GermOnline:ENSMUSG00000069565 Uniprot:Q9JII5
        Length = 406

 Score = 142 (55.0 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68

 Score = 122 (48.0 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD++   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>UNIPROTKB|F2Z3S1 [details] [associations]
            symbol:Dazap1 "Protein Dazap1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305280 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104255 IPI:IPI00365961
            ProteinModelPortal:F2Z3S1 SMR:F2Z3S1 PRIDE:F2Z3S1
            Ensembl:ENSRNOT00000046886 Uniprot:F2Z3S1
        Length = 406

 Score = 142 (55.0 bits), Expect = 4.2e-09, P = 4.2e-09
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             KLF+GGL + T +  L+  F Q+GE+++  ++ D+ T QSRG+GFVKF      G  +
Sbjct:    11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 68

 Score = 122 (48.0 bits), Expect = 6.3e-07, P = 6.3e-07
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD++   K+F+GG+ ++  ET L++ F + G + EV +I D    + RG+GF+ F  E +
Sbjct:   107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>RGD|1559527 [details] [associations]
            symbol:Boll "bol, boule-like (Drosophila)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0007126 "meiosis"
            evidence=IEA;ISO] [GO:0008494 "translation activator activity"
            evidence=IEA;ISO] [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1559527
            GO:GO:0007126 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0008494 CTD:66037 OrthoDB:EOG4MPHQQ GO:GO:0045948
            GeneTree:ENSGT00530000063480 EMBL:CH473965 EMBL:AC103419
            EMBL:AC122091 IPI:IPI00884580 RefSeq:NP_001106841.1
            RefSeq:XP_003750748.1 UniGene:Rn.145717 Ensembl:ENSRNOT00000021299
            GeneID:100911373 GeneID:501143 KEGG:rno:100911373 KEGG:rno:501143
            UCSC:RGD:1559527 NextBio:708414 Uniprot:D4ACT7
        Length = 293

 Score = 139 (54.0 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 26/70 (37%), Positives = 45/70 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGF+ F ++  A + ++E
Sbjct:    46 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFITFETQEDAQKILQE 104

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:   105 AEKLNYKDKK 114


>UNIPROTKB|F1SI86 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:CU469305 Ensembl:ENSSSCT00000017510 Uniprot:F1SI86
        Length = 295

 Score = 139 (54.0 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             ++F+GG+ + TNE  L+  F Q+G + EVK++ DR  G S+GYGFV F ++  A   ++E
Sbjct:    46 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRA-GVSKGYGFVTFETQEDAQRILQE 104

Query:    88 MDGLVCRTSK 97
              + L  +  K
Sbjct:   105 AEKLNYKDKK 114


>UNIPROTKB|F1S420 [details] [associations]
            symbol:F1S420 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 InterPro:IPR012956 Pfam:PF08143
            EMBL:CU914278 Ensembl:ENSSSCT00000015327 OMA:NHEVAGS Uniprot:F1S420
        Length = 300

 Score = 139 (54.0 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 27/61 (44%), Positives = 44/61 (72%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F  +AA+ E + E
Sbjct:    83 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILF-KDAASVEKVIE 141

Query:    88 M 88
             +
Sbjct:   142 I 142


>UNIPROTKB|D6RF44 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0048255 HOGENOM:HOG000234441 EMBL:AC124016
            HGNC:HGNC:5036 ChiTaRS:HNRNPD IPI:IPI00967562
            ProteinModelPortal:D6RF44 SMR:D6RF44 Ensembl:ENST00000515432
            ArrayExpress:D6RF44 Bgee:D6RF44 Uniprot:D6RF44
        Length = 112

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + + 
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:    89 D 89
             +
Sbjct:    61 E 61


>UNIPROTKB|Q60A61 [details] [associations]
            symbol:MCA1010 "RNA-binding protein" species:243233
            "Methylococcus capsulatus str. Bath" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE017282
            GenomeReviews:AE017282_GR HOGENOM:HOG000276232 RefSeq:YP_113486.1
            ProteinModelPortal:Q60A61 GeneID:3102652 KEGG:mca:MCA1010
            PATRIC:22605822 OMA:LAFHSTE Uniprot:Q60A61
        Length = 95

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI- 85
             +KL++G L+Y   +  L+  F  +G +   +V+ DR TG+SRG+GFV+  S+  A  AI 
Sbjct:     3 SKLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIA 62

Query:    86 ----KEMDG 90
                 KEMDG
Sbjct:    63 GLNGKEMDG 71


>UNIPROTKB|B4DTC3 [details] [associations]
            symbol:HNRNPD "cDNA FLJ54150, highly similar to
            Heterogeneous nuclear ribonucleoprotein D0" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 HOGENOM:HOG000234441 HOVERGEN:HBG002295 EMBL:AC124016
            UniGene:Hs.480073 HGNC:HGNC:5036 ChiTaRS:HNRNPD InterPro:IPR012956
            Pfam:PF08143 EMBL:AK300149 IPI:IPI01014602 SMR:B4DTC3 STRING:B4DTC3
            Ensembl:ENST00000543098 Uniprot:B4DTC3
        Length = 303

 Score = 139 (54.0 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 25/62 (40%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + +
Sbjct:    46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105

Query:    88 MD 89
              +
Sbjct:   106 KE 107

 Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   131 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 181


>UNIPROTKB|A6H6Y0 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
            [GO:0042162 "telomeric DNA binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0030529 GO:GO:0043488 GO:GO:0042162 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 OrthoDB:EOG49W2FZ
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:DAAA02018245
            UniGene:Bt.52882 EMBL:BC146038 IPI:IPI00696935 SMR:A6H6Y0
            STRING:A6H6Y0 Ensembl:ENSBTAT00000018540 InParanoid:A6H6Y0
            Uniprot:A6H6Y0
        Length = 355

 Score = 140 (54.3 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 233


>UNIPROTKB|E2RIX2 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            GeneTree:ENSGT00700000104347 KO:K13044 CTD:3184 OMA:PNQNWNQ
            InterPro:IPR012956 Pfam:PF08143 EMBL:AAEX03016719
            RefSeq:XP_857957.1 Ensembl:ENSCAFT00000038801 GeneID:478450
            KEGG:cfa:478450 Uniprot:E2RIX2
        Length = 355

 Score = 140 (54.3 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 233


>UNIPROTKB|Q14103 [details] [associations]
            symbol:HNRNPD "Heterogeneous nuclear ribonucleoprotein D0"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA;NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0042162 "telomeric DNA binding" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0006396
            "RNA processing" evidence=TAS] [GO:0006401 "RNA catabolic process"
            evidence=TAS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
            Reactome:REACT_21257 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AF026126
            GO:GO:0005829 GO:GO:0045893 GO:GO:0005654 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006401 GO:GO:0048255 GO:GO:0030529 EMBL:CH471057
            GO:GO:0000398 GO:GO:0042162 eggNOG:COG0724 HOVERGEN:HBG002295
            KO:K13044 EMBL:AC124016 OrthoDB:EOG49W2FZ EMBL:D55671 EMBL:D55672
            EMBL:D55673 EMBL:D55674 EMBL:AK292707 EMBL:BC002401 EMBL:BC023977
            EMBL:BC026015 EMBL:X03910 EMBL:AF039575 EMBL:M94630 IPI:IPI00028888
            IPI:IPI00220683 IPI:IPI00220684 IPI:IPI00220685 PIR:A24016
            PIR:A44192 PIR:B48138 RefSeq:NP_001003810.1 RefSeq:NP_002129.2
            RefSeq:NP_112737.1 RefSeq:NP_112738.1 UniGene:Hs.480073 PDB:1HD0
            PDB:1HD1 PDB:1IQT PDB:1WTB PDB:1X0F PDB:2Z5N PDBsum:1HD0
            PDBsum:1HD1 PDBsum:1IQT PDBsum:1WTB PDBsum:1X0F PDBsum:2Z5N
            ProteinModelPortal:Q14103 SMR:Q14103 IntAct:Q14103
            MINT:MINT-5001251 STRING:Q14103 PhosphoSite:Q14103 DMDM:13124489
            SWISS-2DPAGE:Q14103 PaxDb:Q14103 PRIDE:Q14103 DNASU:3184
            Ensembl:ENST00000313899 Ensembl:ENST00000352301
            Ensembl:ENST00000353341 GeneID:3184 KEGG:hsa:3184 UCSC:uc003hmm.1
            UCSC:uc003hmn.1 UCSC:uc003hmo.1 UCSC:uc003hmp.1 CTD:3184
            GeneCards:GC04M083274 HGNC:HGNC:5036 HPA:HPA004911 MIM:601324
            neXtProt:NX_Q14103 PharmGKB:PA29361 InParanoid:Q14103 OMA:PNQNWNQ
            PhylomeDB:Q14103 ChiTaRS:HNRNPD EvolutionaryTrace:Q14103
            GenomeRNAi:3184 NextBio:12644 PMAP-CutDB:Q14103 ArrayExpress:Q14103
            Bgee:Q14103 Genevestigator:Q14103 GermOnline:ENSG00000138668
            InterPro:IPR012956 Pfam:PF08143 Uniprot:Q14103
        Length = 355

 Score = 140 (54.3 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 27/77 (35%), Positives = 45/77 (58%)

Query:    13 SVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGF 72
             S R +   +      K+FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GF
Sbjct:    83 SPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGF 142

Query:    73 VKFASEAAAGEAIKEMD 89
             V F    +  + + + +
Sbjct:   143 VLFKESESVDKVMDQKE 159

 Score = 107 (42.7 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 233


>UNIPROTKB|D6RBZ0 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000234441
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC136632 HGNC:HGNC:5034
            ChiTaRS:HNRNPAB IPI:IPI00964992 ProteinModelPortal:D6RBZ0
            SMR:D6RBZ0 Ensembl:ENST00000506339 ArrayExpress:D6RBZ0 Bgee:D6RBZ0
            Uniprot:D6RBZ0
        Length = 327

 Score = 139 (54.0 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   A+  + +  
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   131 KEHRLDGRVIDPKK 144

 Score = 94 (38.1 bits), Expect = 0.00048, P = 0.00048
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D    + RG+ F+ F  E    + +++
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEK 214


>UNIPROTKB|P0CB38 [details] [associations]
            symbol:PABPC4L "Polyadenylate-binding protein 4-like"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01628 EMBL:AC015631
            EMBL:BX648831 IPI:IPI00885166 UniGene:Hs.49889
            ProteinModelPortal:P0CB38 SMR:P0CB38 PhosphoSite:P0CB38
            DMDM:259515737 PaxDb:P0CB38 PRIDE:P0CB38 Ensembl:ENST00000421491
            UCSC:uc010ioe.3 GeneCards:GC04M135117 HGNC:HGNC:31955
            neXtProt:NX_P0CB38 eggNOG:NOG246493 OrthoDB:EOG4M398T NextBio:83098
            Bgee:P0CB38 Genevestigator:P0CB38 Uniprot:P0CB38
        Length = 370

 Score = 140 (54.3 bits), Expect = 5.8e-09, P = 5.8e-09
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:    15 RFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVK 74
             R   L S A+  T ++I     D ++  LKD F ++G+ + VKV+ D  +G+S+G+GFV 
Sbjct:   178 REAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVS 236

Query:    75 FASEAAAGEAIKEMDG 90
             F S  AA +A++EM+G
Sbjct:   237 FDSHEAAKKAVEEMNG 252

 Score = 99 (39.9 bits), Expect = 0.00017, P = 0.00017
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +FI  L    +   L + F   G+I+  KV+ D   G S+GY FV F +++AA  AI+EM
Sbjct:   100 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDD-QG-SKGYAFVHFQNQSAADRAIEEM 157

Query:    89 DGLVCRTSK 97
             +G + +  K
Sbjct:   158 NGKLLKGCK 166

 Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KL+I  L    ++  L++ F   G I  VKV+ +   GQS+G+G + F+S   A +A+ E
Sbjct:   294 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 351

Query:    88 MDGLV 92
             M+G +
Sbjct:   352 MNGRI 356

 Score = 95 (38.5 bits), Expect = 0.00046, P = 0.00046
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             L++G L  D  E +L   F   G ++ +++  D+VT +S GY +V F   A A +A+  M
Sbjct:    12 LYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTM 71

Query:    89 D 89
             +
Sbjct:    72 N 72


>UNIPROTKB|Q99729 [details] [associations]
            symbol:HNRNPAB "Heterogeneous nuclear ribonucleoprotein
            A/B" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=TAS] [GO:0003729 "mRNA binding"
            evidence=TAS] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0001837
            EMBL:CH471165 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 KO:K13044 InterPro:IPR012956 Pfam:PF08143
            EMBL:M65028 EMBL:U76713 EMBL:AK054600 EMBL:AK097657 EMBL:BC001616
            EMBL:BC002625 EMBL:BC004561 EMBL:BC009359 EMBL:BC036708
            IPI:IPI00106509 IPI:IPI00329355 IPI:IPI00334587 IPI:IPI00334713
            PIR:S17563 RefSeq:NP_004490.2 RefSeq:NP_112556.2 UniGene:Hs.591731
            UniGene:Hs.715055 PDB:3S7R PDBsum:3S7R ProteinModelPortal:Q99729
            SMR:Q99729 IntAct:Q99729 MINT:MINT-4537784 STRING:Q99729
            PhosphoSite:Q99729 DMDM:158523286 SWISS-2DPAGE:Q99729 PaxDb:Q99729
            PRIDE:Q99729 Ensembl:ENST00000355836 Ensembl:ENST00000358344
            Ensembl:ENST00000504898 Ensembl:ENST00000506259 GeneID:3182
            KEGG:hsa:3182 UCSC:uc003miu.3 UCSC:uc003miv.3 CTD:3182
            GeneCards:GC05P177631 HGNC:HGNC:5034 HPA:HPA046688 MIM:602688
            neXtProt:NX_Q99729 PharmGKB:PA162391196 InParanoid:Q99729
            OMA:FILFKDP OrthoDB:EOG42BX9K ChiTaRS:HNRNPAB
            EvolutionaryTrace:Q99729 GenomeRNAi:3182 NextBio:12628
            ArrayExpress:Q99729 Bgee:Q99729 CleanEx:HS_HNRNPAB
            Genevestigator:Q99729 GermOnline:ENSG00000197451 Uniprot:Q99729
        Length = 332

 Score = 139 (54.0 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 30/74 (40%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   A+  + +  
Sbjct:    70 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 129

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   130 KEHRLDGRVIDPKK 143


>UNIPROTKB|Q9KVI6 [details] [associations]
            symbol:VC_0159 "RNA-binding protein" species:243277 "Vibrio
            cholerae O1 biovar El Tor str. N16961" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016070 HSSP:P33240
            OMA:YTGPTMT PIR:D82358 RefSeq:NP_229816.1 ProteinModelPortal:Q9KVI6
            DNASU:2614888 GeneID:2614888 KEGG:vch:VC0159 PATRIC:20079354
            ProtClustDB:CLSK873887 Uniprot:Q9KVI6
        Length = 152

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 31/79 (39%), Positives = 51/79 (64%)

Query:    22 DANSRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             +A+S TK L++G L Y  NE+ +K+ F + GE+  V+++ D+ TG+ RG+GFV  A+  A
Sbjct:    58 EASSTTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDKRTGKRRGFGFVVIAASQA 117

Query:    81 --AGEAIKEMDGLVCRTSK 97
               A +A+ E + +  RT K
Sbjct:   118 QTAIDALNEKEYMQ-RTLK 135


>TIGR_CMR|VC_0159 [details] [associations]
            symbol:VC_0159 "RNA-binding protein" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0016070 "RNA metabolic process" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016070 HSSP:P33240
            OMA:YTGPTMT PIR:D82358 RefSeq:NP_229816.1 ProteinModelPortal:Q9KVI6
            DNASU:2614888 GeneID:2614888 KEGG:vch:VC0159 PATRIC:20079354
            ProtClustDB:CLSK873887 Uniprot:Q9KVI6
        Length = 152

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 31/79 (39%), Positives = 51/79 (64%)

Query:    22 DANSRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             +A+S TK L++G L Y  NE+ +K+ F + GE+  V+++ D+ TG+ RG+GFV  A+  A
Sbjct:    58 EASSTTKTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDKRTGKRRGFGFVVIAASQA 117

Query:    81 --AGEAIKEMDGLVCRTSK 97
               A +A+ E + +  RT K
Sbjct:   118 QTAIDALNEKEYMQ-RTLK 135


>MGI|MGI:1330294 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003688 "DNA
            replication origin binding" evidence=ISO] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1330294 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0000166 GO:GO:0003677
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0030529
            GO:GO:0001837 UniGene:Mm.490267 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 OrthoDB:EOG42BX9K
            ChiTaRS:HNRNPAB EMBL:D90151 EMBL:L36663 EMBL:AK076132
            IPI:IPI00117288 PIR:JQ0448 RefSeq:NP_034578.1 UniGene:Mm.280842
            ProteinModelPortal:Q99020 SMR:Q99020 DIP:DIP-31415N IntAct:Q99020
            MINT:MINT-4132837 STRING:Q99020 PhosphoSite:Q99020 PaxDb:Q99020
            PRIDE:Q99020 Ensembl:ENSMUST00000074669 GeneID:15384 KEGG:mmu:15384
            NextBio:288056 Bgee:Q99020 Genevestigator:Q99020
            GermOnline:ENSMUSG00000020358 Uniprot:Q99020
        Length = 285

 Score = 137 (53.3 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   ++  + +  
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   136 KEHRLDGRVIDPKK 149

 Score = 96 (38.9 bits), Expect = 0.00023, P = 0.00023
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FGQ GEI  +++  D    + RG+ F+ F  E
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE 210


>UNIPROTKB|Q9QX80 [details] [associations]
            symbol:Hnrnpab "Hnrpab protein" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0030529 EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            HSSP:Q14103 GeneTree:ENSGT00700000104347 KO:K13044
            InterPro:IPR012956 Pfam:PF08143 CTD:3182 EMBL:AC105470
            EMBL:AF216753 EMBL:BC066664 EMBL:AJ238855 IPI:IPI00212723
            PIR:PC4375 PIR:PC4376 PIR:PC4377 RefSeq:NP_112620.2
            RefSeq:XP_003750864.1 UniGene:Rn.1427 UniGene:Rn.217734 SMR:Q9QX80
            STRING:Q9QX80 Ensembl:ENSRNOT00000033056 GeneID:100910156
            GeneID:83498 KEGG:rno:100910156 KEGG:rno:83498 NextBio:615904
            Genevestigator:Q9QX80 Uniprot:Q9QX80
        Length = 285

 Score = 137 (53.3 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   ++  + +  
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   136 KEHRLDGRVIDPKK 149

 Score = 96 (38.9 bits), Expect = 0.00023, P = 0.00023
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FGQ GEI  +++  D    + RG+ F+ F  E
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE 210


>RGD|69255 [details] [associations]
            symbol:Hnrnpab "heterogeneous nuclear ribonucleoprotein A/B"
           species:10116 "Rattus norvegicus" [GO:0001837 "epithelial to
           mesenchymal transition" evidence=ISO] [GO:0003677 "DNA binding"
           evidence=IDA] [GO:0003688 "DNA replication origin binding"
           evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
           "cytoplasm" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
           evidence=ISO] [GO:0003700 "sequence-specific DNA binding
           transcription factor activity" evidence=ISO] [GO:0043565
           "sequence-specific DNA binding" evidence=ISO] InterPro:IPR000504
           InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
           RGD:69255 GO:GO:0045892 GO:GO:0000166 Gene3D:3.30.70.330
           GO:GO:0003688 HOVERGEN:HBG002295 HSSP:Q14103 InterPro:IPR012956
           Pfam:PF08143 PIR:PC4375 PIR:PC4376 PIR:PC4377 UniGene:Rn.1427
           UniGene:Rn.217734 EMBL:AF108653 IPI:IPI00208193
           ProteinModelPortal:Q9Z0U8 SMR:Q9Z0U8 IntAct:Q9Z0U8 MINT:MINT-7138483
           STRING:Q9Z0U8 PRIDE:Q9Z0U8 UCSC:RGD:69255 Genevestigator:Q9Z0U8
           Uniprot:Q9Z0U8
        Length = 298

 Score = 137 (53.3 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   ++  + +  
Sbjct:    89 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 148

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   149 KEHRLDGRVIDPKK 162

 Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FGQ GEI  +++  D    + RG+ F+ F  E
Sbjct:   173 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE 223


>UNIPROTKB|B1AM48 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623 UniGene:Hs.166109
            HGNC:HGNC:3313 OrthoDB:EOG4JHCFV IPI:IPI00184721 SMR:B1AM48
            Ensembl:ENST00000440102 Uniprot:B1AM48
        Length = 189

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query:    24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGE 83
             +S+T L +  L  +  +  LK  FG  GEI   K++ D++TGQS GYGFV +     A +
Sbjct:    36 DSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEK 95

Query:    84 AIKEMDGLVCRT 95
             AI  ++GL  +T
Sbjct:    96 AINTLNGLRLQT 107

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 29/84 (34%), Positives = 49/84 (58%)

Query:     7 SVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQ 66
             +++ S++   +  + DAN    L++ GL     +  L+  F Q+G II  +++ D+VTG 
Sbjct:   109 TIKVSYARPSSASIRDAN----LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGI 164

Query:    67 SRGYGFVKFASEAAAGEAIKEMDG 90
             SRG GF++F     A EAIK ++G
Sbjct:   165 SRGVGFIRFDKRIEAEEAIKGLNG 188


>UNIPROTKB|J3KTC1 [details] [associations]
            symbol:MSI2 "RNA-binding protein Musashi homolog 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC005325 EMBL:AC007431
            EMBL:AC015883 EMBL:AC091181 Ensembl:ENST00000579590 Uniprot:J3KTC1
        Length = 141

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 27/59 (45%), Positives = 39/59 (66%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             +K+FIGGLS+ T+   L+D F + GEI E  V+ D  T +SRG+GFV FA  A+  + +
Sbjct:    17 SKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 75


>UNIPROTKB|I3LQ36 [details] [associations]
            symbol:I3LQ36 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:CU210877
            Ensembl:ENSSSCT00000005974 Uniprot:I3LQ36
        Length = 161

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGL+++T E  L+D F   G I EV V+ D  T +S+G+GF+ F +   A  A++ 
Sbjct:     7 KLFVGGLNFNTYEQALEDHFSSFGPIFEVVVVKDWETRRSQGFGFITFTNPEHASNAMRA 66

Query:    88 MDG 90
              +G
Sbjct:    67 TNG 69


>UNIPROTKB|J3KTH5 [details] [associations]
            symbol:PABPC4L "Polyadenylate-binding protein 4-like"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 KO:K13126 TIGRFAMs:TIGR01628
            EMBL:AC015631 UniGene:Hs.49889 HGNC:HGNC:31955
            RefSeq:NP_001108206.2 ProteinModelPortal:J3KTH5
            Ensembl:ENST00000529122 GeneID:132430 KEGG:hsa:132430 CTD:132430
            Uniprot:J3KTH5
        Length = 428

 Score = 140 (54.3 bits), Expect = 7.7e-09, P = 7.7e-09
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query:    15 RFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVK 74
             R   L S A+  T ++I     D ++  LKD F ++G+ + VKV+ D  +G+S+G+GFV 
Sbjct:   236 REAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVS 294

Query:    75 FASEAAAGEAIKEMDG 90
             F S  AA +A++EM+G
Sbjct:   295 FDSHEAAKKAVEEMNG 310

 Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +FI  L    +   L + F   G+I+  KV+ D   G S+GY FV F +++AA  AI+EM
Sbjct:   158 VFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDD-QG-SKGYAFVHFQNQSAADRAIEEM 215

Query:    89 DGLVCRTSK 97
             +G + +  K
Sbjct:   216 NGKLLKGCK 224

 Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KL+I  L    ++  L++ F   G I  VKV+ +   GQS+G+G + F+S   A +A+ E
Sbjct:   352 KLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEE--GQSKGFGLICFSSPEDATKAMTE 409

Query:    88 MDGLV 92
             M+G +
Sbjct:   410 MNGRI 414

 Score = 96 (38.9 bits), Expect = 0.00044, P = 0.00044
 Identities = 24/80 (30%), Positives = 41/80 (51%)

Query:    11 SHSVRFTRLLSDANSR-TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRG 69
             +HS +   +   A  R   L++G L  D  E +L   F   G ++ +++  D+VT +S G
Sbjct:    51 THSGKDKEMNVAAKYRMASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLG 110

Query:    70 YGFVKFASEAAAGEAIKEMD 89
             Y +V F   A A +A+  M+
Sbjct:   111 YAYVNFLQLADAQKALDTMN 130


>TAIR|locus:2202740 [details] [associations]
            symbol:AT1G60000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AC005966 HOGENOM:HOG000276232 HSSP:P33240
            EMBL:AF348590 EMBL:AY088142 EMBL:AK316953 IPI:IPI00532959
            PIR:C96624 RefSeq:NP_176208.1 UniGene:At.17057
            ProteinModelPortal:Q9ZUJ3 SMR:Q9ZUJ3 STRING:Q9ZUJ3 PRIDE:Q9ZUJ3
            EnsemblPlants:AT1G60000.1 GeneID:842294 KEGG:ath:AT1G60000
            TAIR:At1g60000 InParanoid:Q9ZUJ3 OMA:NVEDCNI PhylomeDB:Q9ZUJ3
            ProtClustDB:CLSN2913540 ArrayExpress:Q9ZUJ3 Genevestigator:Q9ZUJ3
            Uniprot:Q9ZUJ3
        Length = 258

 Score = 135 (52.6 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 26/63 (41%), Positives = 41/63 (65%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+G LS+      L  AF + G+++  +V+ D  TG+SRGYGFV ++S+A    A++ 
Sbjct:   178 KLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALES 237

Query:    88 MDG 90
             +DG
Sbjct:   238 LDG 240

 Score = 90 (36.7 bits), Expect = 0.00087, P = 0.00087
 Identities = 21/64 (32%), Positives = 31/64 (48%)

Query:    27 TKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             TKL+ G L Y+ +   L            V+V+ +R TGQSRG+ FV  ++       I 
Sbjct:    85 TKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIID 144

Query:    87 EMDG 90
              +DG
Sbjct:   145 NLDG 148


>FB|FBgn0263396 [details] [associations]
            symbol:sqd "squid" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;IDA;TAS] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0008069 "dorsal/ventral axis specification, ovarian follicular
            epithelium" evidence=IMP] [GO:0007297 "ovarian follicle cell
            migration" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP;TAS]
            [GO:0008298 "intracellular mRNA localization" evidence=NAS;TAS]
            [GO:0017148 "negative regulation of translation" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0009953
            "dorsal/ventral pattern formation" evidence=IMP;TAS] [GO:0006405
            "RNA export from nucleus" evidence=TAS] [GO:0030529
            "ribonucleoprotein complex" evidence=ISS;NAS] [GO:0003729 "mRNA
            binding" evidence=ISS;NAS] [GO:0035062 "omega speckle"
            evidence=IDA] [GO:0000785 "chromatin" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
            catabolic process, nonsense-mediated decay" evidence=TAS]
            [GO:0006406 "mRNA export from nucleus" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0019094 "pole plasm mRNA localization"
            evidence=IMP] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0030720 "oocyte localization
            involved in germarium-derived egg chamber formation" evidence=IMP]
            [GO:0016325 "oocyte microtubule cytoskeleton organization"
            evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
            evidence=IMP] [GO:0007314 "oocyte anterior/posterior axis
            specification" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
            localization" evidence=IEP] [GO:0071011 "precatalytic spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0033119 "negative regulation of RNA splicing"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0005737
            GO:GO:0000184 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0000785 GO:GO:0003730 GO:GO:0006406 GO:GO:0033119
            GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0030720
            GO:GO:0007297 eggNOG:COG0724 GO:GO:0045451 GO:GO:0005703
            GO:GO:0000381 GO:GO:0016325 GO:GO:0008069
            GeneTree:ENSGT00700000104255 GO:GO:0035062 EMBL:X62637 EMBL:X62638
            EMBL:S61875 EMBL:S62100 EMBL:AY118501 EMBL:BT001384 EMBL:BT003283
            EMBL:BT023832 EMBL:S51693 PIR:A47369 PIR:B41732 PIR:B47369
            PIR:C48110 RefSeq:NP_001247088.1 RefSeq:NP_652209.1
            RefSeq:NP_731825.1 RefSeq:NP_731826.1 RefSeq:NP_996203.1
            UniGene:Dm.7189 ProteinModelPortal:Q08473 SMR:Q08473 IntAct:Q08473
            MINT:MINT-847475 STRING:Q08473 PaxDb:Q08473
            EnsemblMetazoa:FBtr0082855 GeneID:41666 KEGG:dme:Dmel_CG16901
            CTD:41666 FlyBase:FBgn0263396 InParanoid:Q08473 KO:K03102
            OMA:GDIDSIN OrthoDB:EOG43BK52 PhylomeDB:Q08473 ChiTaRS:sqd
            GenomeRNAi:41666 NextBio:824926 Bgee:Q08473 GermOnline:CG16901
            Uniprot:Q08473
        Length = 344

 Score = 138 (53.6 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 28/70 (40%), Positives = 43/70 (61%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             KLF+GGLS++T E  L+D FG++GEI  + V  D  TG+SRG+ F+ F +  A  + +  
Sbjct:    57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI-DKVSA 115

Query:    88 MDGLVCRTSK 97
              D  +  + K
Sbjct:   116 ADEHIINSKK 125

 Score = 114 (45.2 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 21/59 (35%), Positives = 37/59 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIK 86
             K+F+GGL+ + ++  +K  FGQ G I+EV++  D+   Q +G+ F+ F SE    + +K
Sbjct:   137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195


>TAIR|locus:2027372 [details] [associations]
            symbol:RBP45B species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0010193 "response to ozone" evidence=IEP] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010193 EMBL:AC007296
            HSSP:P19339 eggNOG:COG0724 GO:GO:0008143 HOGENOM:HOG000186228
            EMBL:AY093201 EMBL:BT008494 EMBL:AK318868 EMBL:AY086969
            IPI:IPI00523017 IPI:IPI00536746 PIR:H86249 RefSeq:NP_172630.1
            RefSeq:NP_849641.1 UniGene:At.19842 ProteinModelPortal:Q9SAB3
            SMR:Q9SAB3 IntAct:Q9SAB3 PRIDE:Q9SAB3 EnsemblPlants:AT1G11650.2
            GeneID:837708 KEGG:ath:AT1G11650 TAIR:At1g11650 InParanoid:Q9SAB3
            OMA:PQAHYGQ PhylomeDB:Q9SAB3 ProtClustDB:CLSN2682179
            Genevestigator:Q9SAB3 Uniprot:Q9SAB3
        Length = 405

 Score = 139 (54.0 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 26/68 (38%), Positives = 44/68 (64%)

Query:    29 LFIGGLSYDTNETVLKDAF-GQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +F+G L+ D  + +L + F   +  +   KV+ DRVTG+++GYGFV+F+ E+    A+ E
Sbjct:   157 IFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTE 216

Query:    88 MDGLVCRT 95
             M+G+ C T
Sbjct:   217 MNGVPCST 224

 Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/61 (45%), Positives = 38/61 (62%)

Query:    26 RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             RT L+IG L Y  +E  L   F   GE++  KVI ++ TGQ  GYGF++FAS AAA   +
Sbjct:    62 RT-LWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVL 120

Query:    86 K 86
             +
Sbjct:   121 Q 121

 Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 24/71 (33%), Positives = 43/71 (60%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             +D N+ T +F+GGL     +  LK+ F Q+GEI+ VK+         +  GFV+F+ ++ 
Sbjct:   256 NDPNNTT-VFVGGLDASVTDDHLKNVFSQYGEIVHVKIPA------GKRCGFVQFSEKSC 308

Query:    81 AGEAIKEMDGL 91
             A EA++ ++G+
Sbjct:   309 AEEALRMLNGV 319


>POMBASE|SPBC660.15 [details] [associations]
            symbol:SPBC660.15 "mRNA cleavage factor complex subunit
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005849 "mRNA cleavage factor
            complex" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
            evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 PomBase:SPBC660.15 GO:GO:0005737 GO:GO:0000166
            EMBL:CU329671 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
            eggNOG:COG0724 GO:GO:0006379 GO:GO:0005849 KO:K14411 HSSP:Q14103
            OrthoDB:EOG4TF3VC PIR:T40627 RefSeq:NP_595094.1
            ProteinModelPortal:O94432 SMR:O94432 STRING:O94432
            EnsemblFungi:SPBC660.15.1 GeneID:2541150 KEGG:spo:SPBC660.15
            OMA:CHKANDG NextBio:20802263 Uniprot:O94432
        Length = 474

 Score = 140 (54.3 bits), Expect = 9.2e-09, P = 9.2e-09
 Identities = 28/68 (41%), Positives = 45/68 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-K 86
             K+FIGGL+++T +  L+D F Q GE+++  V+ D  TG+SRG+GF+ F +     E + K
Sbjct:   164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223

Query:    87 E--MDGLV 92
             E  +DG +
Sbjct:   224 EHHLDGKI 231

 Score = 114 (45.2 bits), Expect = 5.9e-06, P = 5.9e-06
 Identities = 19/53 (35%), Positives = 35/53 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             K+F+GG+  D  E   ++ F Q G +++  ++ D+ TG+ RG+GFV + +E+A
Sbjct:   248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESA 300


>TAIR|locus:2049816 [details] [associations]
            symbol:AT2G37510 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:AC005896 GO:GO:0003676 HOGENOM:HOG000276232
            HSSP:P11940 EMBL:AY084740 EMBL:BT028941 IPI:IPI00545899 PIR:F84793
            RefSeq:NP_181287.1 UniGene:At.37414 ProteinModelPortal:Q8S8L4
            SMR:Q8S8L4 PRIDE:Q8S8L4 EnsemblPlants:AT2G37510.1 GeneID:818327
            KEGG:ath:AT2G37510 TAIR:At2g37510 eggNOG:NOG305672
            InParanoid:Q8S8L4 OMA:NKTIGWC PhylomeDB:Q8S8L4
            ProtClustDB:CLSN2683075 ArrayExpress:Q8S8L4 Genevestigator:Q8S8L4
            Uniprot:Q8S8L4
        Length = 142

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 26/62 (41%), Positives = 42/62 (67%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +LF+ GLS  T    L+DAF   G++++ +VI DR +G+S+G+GFV +A+   A +A  E
Sbjct:    35 RLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAE 94

Query:    88 MD 89
             M+
Sbjct:    95 MN 96


>UNIPROTKB|E9PTS0 [details] [associations]
            symbol:Hnrnpab "Protein Hnrnpab" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            InterPro:IPR012956 Pfam:PF08143 EMBL:AC105470 IPI:IPI00951862
            Ensembl:ENSRNOT00000065584 ArrayExpress:E9PTS0 Uniprot:E9PTS0
        Length = 331

 Score = 137 (53.3 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   ++  + +  
Sbjct:    75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   135 KEHRLDGRVIDPKK 148

 Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FGQ GEI  +++  D    + RG+ F+ F  E
Sbjct:   159 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE 209


>UNIPROTKB|Q9QX81 [details] [associations]
            symbol:Hnrnpab "RCG34663, isoform CRA_a" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001837 "epithelial to mesenchymal transition" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:69255 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529 GO:GO:0001837
            EMBL:CH473948 HOGENOM:HOG000234441 HOVERGEN:HBG002295 HSSP:Q14103
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 OMA:FILFKDP OrthoDB:EOG42BX9K EMBL:AC105470 PIR:PC4375
            PIR:PC4376 PIR:PC4377 UniGene:Rn.1427 UniGene:Rn.217734
            GeneID:100910156 KEGG:rno:100910156 EMBL:AJ238854 IPI:IPI00212724
            RefSeq:XP_003750865.1 SMR:Q9QX81 STRING:Q9QX81
            Ensembl:ENSRNOT00000004885 InParanoid:Q9QX81 Genevestigator:Q9QX81
            Uniprot:Q9QX81
        Length = 332

 Score = 137 (53.3 bits), Expect = 9.8e-09, P = 9.8e-09
 Identities = 29/74 (39%), Positives = 47/74 (63%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F   ++  + +  
Sbjct:    76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   136 KEHRLDGRVIDPKK 149

 Score = 96 (38.9 bits), Expect = 0.00030, P = 0.00030
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FGQ GEI  +++  D    + RG+ F+ F  E
Sbjct:   160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEE 210


>UNIPROTKB|Q5ZI72 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0000166 GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351
            GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 EMBL:AJ720912 IPI:IPI00591109
            RefSeq:NP_001026313.1 UniGene:Gga.4605 HSSP:Q14103
            ProteinModelPortal:Q5ZI72 SMR:Q5ZI72 PRIDE:Q5ZI72
            Ensembl:ENSGALT00000018235 GeneID:422601 KEGG:gga:422601 CTD:9987
            GeneTree:ENSGT00700000104347 KO:K13044 NextBio:20825211
            Uniprot:Q5ZI72
        Length = 301

 Score = 136 (52.9 bits), Expect = 9.9e-09, P = 9.9e-09
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT++  L +   + GE+++  +  D VTG+SRG+GFV F  +AA+ E + E
Sbjct:    31 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF-KDAASVEKVLE 89

Query:    88 M 88
             +
Sbjct:    90 L 90

 Score = 112 (44.5 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT+E  +K+ FG  GEI  +++  D  T + RG+ F+ +  E
Sbjct:   116 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE 166


>UNIPROTKB|Q5ZIH1 [details] [associations]
            symbol:HNRNPD "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0042162 "telomeric DNA binding"
            evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0030529 GO:GO:0043488 GO:GO:0042162
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            UniGene:Gga.4605 GeneTree:ENSGT00700000104347 KO:K13044
            OrthoDB:EOG49W2FZ CTD:3184 OMA:PNQNWNQ EMBL:AADN02009040
            EMBL:AJ720813 IPI:IPI00597667 RefSeq:NP_001026314.1 SMR:Q5ZIH1
            STRING:Q5ZIH1 Ensembl:ENSGALT00000018234 GeneID:422602
            KEGG:gga:422602 InParanoid:Q5ZIH1 NextBio:20825212 Uniprot:Q5ZIH1
        Length = 257

 Score = 134 (52.2 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 24/61 (39%), Positives = 40/61 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +FIGGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F    +  + + + 
Sbjct:     1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60

Query:    89 D 89
             +
Sbjct:    61 E 61

 Score = 108 (43.1 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:    85 KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEE 135


>ZFIN|ZDB-GENE-070424-97 [details] [associations]
            symbol:hnrnpd "heterogeneous nuclear
            ribonucleoprotein D" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070424-97 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104347
            OMA:PNQNWNQ InterPro:IPR012956 Pfam:PF08143 EMBL:CR847788
            IPI:IPI00512852 Ensembl:ENSDART00000101414
            Ensembl:ENSDART00000123048 Uniprot:F1Q8A5
        Length = 314

 Score = 136 (52.9 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 27/58 (46%), Positives = 41/58 (70%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI 85
             K+F+GGLS+DT +  LKD F + GE+++  +  D +TG+SRG+GFV F  EA + E +
Sbjct:    55 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLF-KEAESVEKV 111

 Score = 100 (40.3 bits), Expect = 0.00010, P = 0.00010
 Identities = 18/51 (35%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ F  +GE+  +++  +  T + RG+ F+ F  E
Sbjct:   140 KIFVGGLSPDTPEEKIREYFDAYGEVESIELPMENKTNKRRGFCFITFKEE 190


>UNIPROTKB|Q3ZC44 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 CTD:3182 OMA:FILFKDP EMBL:DAAA02020063
            EMBL:DAAA02020062 EMBL:BC102923 IPI:IPI00843025
            RefSeq:NP_001035612.1 UniGene:Bt.58979 SMR:Q3ZC44
            Ensembl:ENSBTAT00000018114 GeneID:513410 KEGG:bta:513410
            NextBio:20870841 Uniprot:Q3ZC44
        Length = 285

 Score = 135 (52.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 29/74 (39%), Positives = 46/74 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAI-- 85
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F    +  + +  
Sbjct:    71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130

Query:    86 KE--MDGLVCRTSK 97
             KE  +DG V    K
Sbjct:   131 KEHRLDGRVIDPKK 144

 Score = 96 (38.9 bits), Expect = 0.00023, P = 0.00023
 Identities = 17/60 (28%), Positives = 36/60 (60%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D  + + RG+ F+ F  E    + +++
Sbjct:   155 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEK 214


>MGI|MGI:1923417 [details] [associations]
            symbol:Snrnp35 "small nuclear ribonucleoprotein 35
            (U11/U12)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0008380 "RNA splicing"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1923417 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 GO:GO:0005689 HSSP:Q14103
            GeneTree:ENSGT00530000063750 CTD:11066 HOGENOM:HOG000006374
            HOVERGEN:HBG104583 KO:K13155 OMA:QHEVFVD OrthoDB:EOG4MSD0C
            ChiTaRS:SNRNP35 EMBL:AK018232 EMBL:AK039064 EMBL:BC043031
            EMBL:BC058361 IPI:IPI00135531 RefSeq:NP_083808.1 UniGene:Mm.156035
            ProteinModelPortal:Q9D384 SMR:Q9D384 STRING:Q9D384
            PhosphoSite:Q9D384 PRIDE:Q9D384 Ensembl:ENSMUST00000031349
            Ensembl:ENSMUST00000111453 GeneID:76167 KEGG:mmu:76167
            UCSC:uc008zpy.1 InParanoid:Q9D384 NextBio:344705 Bgee:Q9D384
            Genevestigator:Q9D384 Uniprot:Q9D384
        Length = 244

 Score = 133 (51.9 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 25/64 (39%), Positives = 42/64 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LF+  L+  T E  LK+ F ++G+I  ++++ D VTG S+GY F+++  E A  +A ++ 
Sbjct:    53 LFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDA 112

Query:    89 DGLV 92
             DGLV
Sbjct:   113 DGLV 116


>ZFIN|ZDB-GENE-070212-1 [details] [associations]
            symbol:dazap1 "DAZ associated protein 1" species:7955
            "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-070212-1 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 OMA:HNLDGRN GeneTree:ENSGT00700000104255
            EMBL:BX255969 EMBL:BX323045 IPI:IPI00961610
            Ensembl:ENSDART00000104362 Bgee:F1QBG2 Uniprot:F1QBG2
        Length = 407

 Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 23/48 (47%), Positives = 36/48 (75%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKF 75
             KLF+GGL + T +  L++ F Q+GE+++  ++ D+ T QSRG+GFVKF
Sbjct:    12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKF 59

 Score = 128 (50.1 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 23/65 (35%), Positives = 40/65 (61%)

Query:    21 SDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAA 80
             SD+N   K+F+GG+ ++  E  L+D F + G + EV +I D    + RG+GF+ F +E +
Sbjct:   107 SDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQS 166

Query:    81 AGEAI 85
               +A+
Sbjct:   167 VDQAV 171


>UNIPROTKB|Q16560 [details] [associations]
            symbol:SNRNP35 "U11/U12 small nuclear ribonucleoprotein 35
            kDa protein" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005689 "U12-type spliceosomal complex"
            evidence=IDA] [GO:0008380 "RNA splicing" evidence=IC]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 EMBL:CH471054 GO:GO:0003723 HSSP:Q9V535
            eggNOG:COG0724 GO:GO:0005689 CTD:11066 HOGENOM:HOG000006374
            HOVERGEN:HBG104583 KO:K13155 OMA:QHEVFVD OrthoDB:EOG4MSD0C
            EMBL:U44798 EMBL:U44799 EMBL:AK290127 EMBL:BC009622 EMBL:BC047678
            EMBL:BC054034 EMBL:BC093671 EMBL:BC111955 EMBL:BK005197
            IPI:IPI00007576 IPI:IPI00377030 PIR:G02371 RefSeq:NP_073208.1
            RefSeq:NP_851030.1 UniGene:Hs.632738 ProteinModelPortal:Q16560
            SMR:Q16560 STRING:Q16560 PhosphoSite:Q16560 DMDM:74754517
            PRIDE:Q16560 DNASU:11066 Ensembl:ENST00000350887
            Ensembl:ENST00000412157 Ensembl:ENST00000526639 GeneID:11066
            KEGG:hsa:11066 UCSC:uc001ufb.1 UCSC:uc021rfv.1
            GeneCards:GC12P123891 HGNC:HGNC:30852 neXtProt:NX_Q16560
            PharmGKB:PA164726115 InParanoid:Q16560 ChiTaRS:SNRNP35
            GenomeRNAi:11066 NextBio:42065 Bgee:Q16560 CleanEx:HS_SNRNP35
            Genevestigator:Q16560 Uniprot:Q16560
        Length = 246

 Score = 133 (51.9 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 25/64 (39%), Positives = 42/64 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LF+  L+  T E  LK+ F ++G+I  ++++ D VTG S+GY F+++  E A  +A ++ 
Sbjct:    53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDA 112

Query:    89 DGLV 92
             DGLV
Sbjct:   113 DGLV 116


>TAIR|locus:2134638 [details] [associations]
            symbol:LIF2 "LHP1-Interacting Factor 2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
            [GO:0010048 "vernalization response" evidence=RCA] [GO:0016558
            "protein import into peroxisome matrix" evidence=RCA] [GO:0048573
            "photoperiodism, flowering" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 KO:K13161 UniGene:At.24279
            HSSP:Q9Y5S9 EMBL:AF367357 EMBL:AY113171 EMBL:AK227578
            IPI:IPI00532730 RefSeq:NP_001031566.1 RefSeq:NP_567192.1
            ProteinModelPortal:Q9ASP6 SMR:Q9ASP6 PRIDE:Q9ASP6
            EnsemblPlants:AT4G00830.1 EnsemblPlants:AT4G00830.2 GeneID:827998
            KEGG:ath:AT4G00830 TAIR:At4g00830 HOGENOM:HOG000243749
            InParanoid:Q9ASP6 PhylomeDB:Q9ASP6 ProtClustDB:CLSN2698006
            Genevestigator:Q9ASP6 Uniprot:Q9ASP6
        Length = 495

 Score = 139 (54.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%)

Query:    15 RFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVK 74
             +++ LLS     +++FIGGL  D  E  L+D   + GEI EV+++ DR +G S+GY FV 
Sbjct:   104 KYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVA 163

Query:    75 FASEAAAGEAIKEM 88
             F ++  A +AI+E+
Sbjct:   164 FKTKDVAQKAIEEL 177


>UNIPROTKB|G3V6A5 [details] [associations]
            symbol:Hnrpd "Heterogeneous nuclear ribonucleoprotein D,
            isoform CRA_c" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:620365 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0030529
            GeneTree:ENSGT00700000104347 KO:K13044 InterPro:IPR012956
            Pfam:PF08143 RefSeq:NP_001076008.1 UniGene:Rn.94022 GeneID:79256
            KEGG:rno:79256 CTD:79256 NextBio:614748 EMBL:CH474022
            Ensembl:ENSRNOT00000003173 Uniprot:G3V6A5
        Length = 334

 Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 24/62 (38%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT +  LKD F + G++++  +  D +TG+SRG+GFV F    +  + + +
Sbjct:    77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136

Query:    88 MD 89
              +
Sbjct:   137 KE 138

 Score = 107 (42.7 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT E  +++ FG  GE+  +++  D  T + RG+ F+ F  E
Sbjct:   162 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEE 212


>UNIPROTKB|F1NIB4 [details] [associations]
            symbol:HNRNPAB "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104347 EMBL:AADN02028501 EMBL:AADN02028502
            EMBL:AADN02028503 IPI:IPI00603451 ProteinModelPortal:F1NIB4
            Ensembl:ENSGALT00000023233 ArrayExpress:F1NIB4 Uniprot:F1NIB4
        Length = 212

 Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 23/62 (37%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGLS+DT++  LKD F + GE+ +  +  D  TG+SRG+GF+ F    +  + +++
Sbjct:     1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60

Query:    88 MD 89
              +
Sbjct:    61 KE 62

 Score = 99 (39.9 bits), Expect = 5.5e-05, P = 5.5e-05
 Identities = 18/51 (35%), Positives = 32/51 (62%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGL+ +  E  +++ FG+ GEI  +++  D  T + RG+ F+ F  E
Sbjct:    85 KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEE 135


>TAIR|locus:2094098 [details] [associations]
            symbol:RBP47B "RNA-binding protein 47B" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0042991 "transcription
            factor import into nucleus" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            EMBL:AP000419 GO:GO:0010494 eggNOG:COG0724 HSSP:P09651
            GO:GO:0008143 HOGENOM:HOG000186228 EMBL:AK226472 EMBL:BT026489
            EMBL:AY084821 IPI:IPI00522174 IPI:IPI00785888 RefSeq:NP_188544.1
            UniGene:At.8226 ProteinModelPortal:Q0WW84 SMR:Q0WW84 STRING:Q0WW84
            PaxDb:Q0WW84 PRIDE:Q0WW84 EnsemblPlants:AT3G19130.1 GeneID:821447
            KEGG:ath:AT3G19130 TAIR:At3g19130 InParanoid:Q0WW84 OMA:RAVENGP
            PhylomeDB:Q0WW84 ProtClustDB:CLSN2913615 Genevestigator:Q0WW84
            Uniprot:Q0WW84
        Length = 435

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 30/68 (44%), Positives = 41/68 (60%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             L++G L +  +ET L   F   GE+  VKVI +++T QS GYGFV+F S AAA E ++  
Sbjct:   110 LWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNY 169

Query:    89 DGLVCRTS 96
              G V   S
Sbjct:   170 SGSVMPNS 177

 Score = 130 (50.8 bits), Expect = 9.6e-08, P = 9.6e-08
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:    29 LFIGGLSYDTNETVLKDAFG-QHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +F+G LS D  + +L + F  ++  +   KV+ D  TG+S+GYGFV+F  E     A+ E
Sbjct:   204 VFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTE 263

Query:    88 MDGLVC 93
             M+G  C
Sbjct:   264 MNGAYC 269

 Score = 114 (45.2 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 31/86 (36%), Positives = 47/86 (54%)

Query:    21 SDANS-RTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             SD  S    +F+GG+  D  +  L+  F Q GE++ VK+      G  +G GFV+FA   
Sbjct:   314 SDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI----PVG--KGCGFVQFADRK 367

Query:    80 AAGEAIKEMDGLVCRTSKDTDMLSTG 105
             +A +AI+ ++G V    K+T  LS G
Sbjct:   368 SAEDAIESLNGTVI--GKNTVRLSWG 391


>UNIPROTKB|F1NCV5 [details] [associations]
            symbol:HNRPDL "Heterogeneous nuclear ribonucleoprotein
            D-like" species:9031 "Gallus gallus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00700000104347 OMA:QHPPADN
            EMBL:AADN02009038 EMBL:AADN02009039 IPI:IPI00822447
            Ensembl:ENSGALT00000038016 Uniprot:F1NCV5
        Length = 338

 Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 27/61 (44%), Positives = 43/61 (70%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+DT++  L +   + GE+++  +  D VTG+SRG+GFV F  +AA+ E + E
Sbjct:    67 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF-KDAASVEKVLE 125

Query:    88 M 88
             +
Sbjct:   126 L 126

 Score = 112 (44.5 bits), Expect = 5.6e-06, P = 5.6e-06
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT+E  +K+ FG  GEI  +++  D  T + RG+ F+ +  E
Sbjct:   152 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE 202


>ZFIN|ZDB-GENE-990415-245 [details] [associations]
            symbol:elavl1 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 1 (Hu antigen R)" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-245 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:BX649372 IPI:IPI00817195
            PRIDE:F1QM02 Ensembl:ENSDART00000146123 ArrayExpress:F1QM02
            Bgee:F1QM02 Uniprot:F1QM02
        Length = 340

 Score = 136 (52.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 30/89 (33%), Positives = 52/89 (58%)

Query:     4 LNGSVRFSHSVR--FTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICD 61
             LNG    S +++  + R  SD+     L+I GL     +  +++ FG++G II  +V+ D
Sbjct:    95 LNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVD 154

Query:    62 RVTGQSRGYGFVKFASEAAAGEAIKEMDG 90
             + +G SRG  F++F   A A +AIK+++G
Sbjct:   155 QASGLSRGVAFIRFDKRAEAEDAIKDLNG 183

 Score = 113 (44.8 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 24/68 (35%), Positives = 38/68 (55%)

Query:    24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGE 83
             +S+T L +  L  + ++  L+  F   GE+   K+I D+V G S GYGFV + +   A  
Sbjct:    31 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAER 90

Query:    84 AIKEMDGL 91
             AI  ++GL
Sbjct:    91 AISTLNGL 98

 Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
 Identities = 23/62 (37%), Positives = 32/62 (51%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             +FI  L  D +E +L   FG  G +  VKVI D  T + +G+GFV       A  AI  +
Sbjct:   260 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASL 319

Query:    89 DG 90
             +G
Sbjct:   320 NG 321


>ZFIN|ZDB-GENE-020419-22 [details] [associations]
            symbol:sf3b4 "splicing factor 3b, subunit 4"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-020419-22 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295 EMBL:AY099515
            IPI:IPI00495328 UniGene:Dr.1505 ProteinModelPortal:Q8JGT1
            SMR:Q8JGT1 STRING:Q8JGT1 InParanoid:Q8JGT1 ArrayExpress:Q8JGT1
            Uniprot:Q8JGT1
        Length = 400

 Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>RGD|1309950 [details] [associations]
            symbol:Hnrpdl "heterogeneous nuclear ribonucleoprotein D-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309950 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 135 (52.6 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             S  K+FIGGLS+DT++  L +   + GE+++  +  D VTG+SRG+GFV F  +AA+ + 
Sbjct:    49 SGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF-KDAASVDK 107

Query:    85 IKEM 88
             + E+
Sbjct:   108 VLEL 111

 Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT+E  +K+ FG  GEI  +++  D  T + RG+ F+ +  E
Sbjct:   137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE 187


>UNIPROTKB|Q3SWU3 [details] [associations]
            symbol:Hnrpdl "Heterogeneous nuclear ribonucleoprotein
            D-like" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1309950
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0000166
            GO:GO:0003677 Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HSSP:Q14103 CTD:9987 KO:K13044
            EMBL:BC104683 IPI:IPI00363719 RefSeq:NP_001028868.1
            UniGene:Rn.102146 ProteinModelPortal:Q3SWU3 SMR:Q3SWU3
            PhosphoSite:Q3SWU3 PRIDE:Q3SWU3 GeneID:305178 KEGG:rno:305178
            NextBio:654187 Genevestigator:Q3SWU3 Uniprot:Q3SWU3
        Length = 322

 Score = 135 (52.6 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 27/64 (42%), Positives = 44/64 (68%)

Query:    25 SRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEA 84
             S  K+FIGGLS+DT++  L +   + GE+++  +  D VTG+SRG+GFV F  +AA+ + 
Sbjct:    49 SGNKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLF-KDAASVDK 107

Query:    85 IKEM 88
             + E+
Sbjct:   108 VLEL 111

 Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 21/51 (41%), Positives = 33/51 (64%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             K+F+GGLS DT+E  +K+ FG  GEI  +++  D  T + RG+ F+ +  E
Sbjct:   137 KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDE 187


>UNIPROTKB|H9L019 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:AADN02044320 RefSeq:XP_423721.2 UniGene:Gga.51399
            ProteinModelPortal:H9L019 Ensembl:ENSGALT00000021786 GeneID:426042
            KEGG:gga:426042 Uniprot:H9L019
        Length = 418

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>UNIPROTKB|F1MWR2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:DAAA02007272 IPI:IPI00717302 RefSeq:NP_001192513.1
            UniGene:Bt.3914 ProteinModelPortal:F1MWR2
            Ensembl:ENSBTAT00000016577 GeneID:506123 KEGG:bta:506123
            NextBio:20867458 ArrayExpress:F1MWR2 Uniprot:F1MWR2
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>UNIPROTKB|E2R5T2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:AAEX03011046 EMBL:AAEX03011045 RefSeq:XP_540295.3
            ProteinModelPortal:E2R5T2 Ensembl:ENSCAFT00000018450 GeneID:483177
            KEGG:cfa:483177 NextBio:20857615 Uniprot:E2R5T2
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>UNIPROTKB|Q15427 [details] [associations]
            symbol:SF3B4 "Splicing factor 3B subunit 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=TAS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=TAS] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
            GO:GO:0000166 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:CH471121 GO:GO:0000398 EMBL:AL591493 eggNOG:COG0724
            HOVERGEN:HBG002295 GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831
            EMBL:AL590487 OMA:VSETLLW EMBL:L35013 EMBL:BC004273 EMBL:BC013886
            EMBL:BC090883 IPI:IPI00017339 PIR:A54964 RefSeq:NP_005841.1
            UniGene:Hs.516160 PDB:1X5T PDB:1X5U PDBsum:1X5T PDBsum:1X5U
            ProteinModelPortal:Q15427 SMR:Q15427 IntAct:Q15427
            MINT:MINT-1032702 STRING:Q15427 PhosphoSite:Q15427 DMDM:2500587
            PaxDb:Q15427 PeptideAtlas:Q15427 PRIDE:Q15427 DNASU:10262
            Ensembl:ENST00000271628 Ensembl:ENST00000582851 GeneID:10262
            KEGG:hsa:10262 UCSC:uc001etk.2 CTD:10262 GeneCards:GC01M149895
            HGNC:HGNC:10771 HPA:HPA028578 MIM:154400 MIM:605593
            neXtProt:NX_Q15427 Orphanet:245 PharmGKB:PA35689 InParanoid:Q15427
            OrthoDB:EOG4M65JJ PhylomeDB:Q15427 EvolutionaryTrace:Q15427
            GenomeRNAi:10262 NextBio:38880 ArrayExpress:Q15427 Bgee:Q15427
            CleanEx:HS_SF3B4 Genevestigator:Q15427 GermOnline:ENSG00000143368
            Uniprot:Q15427
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>UNIPROTKB|F1SDG0 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:CU468464 RefSeq:XP_001926524.1 UniGene:Ssc.3222
            ProteinModelPortal:F1SDG0 Ensembl:ENSSSCT00000007303
            GeneID:100157814 KEGG:ssc:100157814 Uniprot:F1SDG0
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>MGI|MGI:109580 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:109580 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 CTD:10262
            OrthoDB:EOG4M65JJ EMBL:AK047751 EMBL:AK135543 EMBL:BC024418
            EMBL:BC026567 EMBL:BC085273 IPI:IPI00154082 RefSeq:NP_694693.1
            UniGene:Mm.219671 ProteinModelPortal:Q8QZY9 SMR:Q8QZY9
            IntAct:Q8QZY9 STRING:Q8QZY9 PhosphoSite:Q8QZY9 PaxDb:Q8QZY9
            PRIDE:Q8QZY9 Ensembl:ENSMUST00000076372 GeneID:107701
            KEGG:mmu:107701 UCSC:uc008qme.1 InParanoid:Q8QZY9 OMA:FASISHH
            NextBio:359278 Bgee:Q8QZY9 Genevestigator:Q8QZY9 Uniprot:Q8QZY9
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>RGD|1309667 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA;ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309667 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 OMA:VSETLLW CTD:10262
            OrthoDB:EOG4M65JJ EMBL:BC078997 IPI:IPI00371860
            RefSeq:NP_001011951.1 UniGene:Rn.116275 ProteinModelPortal:Q6AYL5
            SMR:Q6AYL5 STRING:Q6AYL5 PRIDE:Q6AYL5 Ensembl:ENSRNOT00000028758
            GeneID:295270 KEGG:rno:295270 UCSC:RGD:1309667 InParanoid:Q6AYL5
            NextBio:639268 Genevestigator:Q6AYL5 Uniprot:Q6AYL5
        Length = 424

 Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)

Query:    20 LSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEA 79
             +S+ N    +++GGL    +E +L + F Q G ++   +  DRVTGQ +GYGFV+F SE 
Sbjct:     6 ISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEE 65

Query:    80 AAGEAIKEMD 89
              A  AIK M+
Sbjct:    66 DADYAIKIMN 75

 Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEV-KVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             +FIG L  + +E +L D F   G I++  K++ D  TG S+GY F+ FAS  A+  AI+ 
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    88 MDG 90
             M+G
Sbjct:   162 MNG 164


>UNIPROTKB|F1MS42 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0005844
            "polysome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 GeneTree:ENSGT00700000104255 OMA:GLPGSHP
            EMBL:DAAA02045450 EMBL:DAAA02045451 IPI:IPI00718423
            Ensembl:ENSBTAT00000012926 Uniprot:F1MS42
        Length = 342

 Score = 135 (52.6 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:     1 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 60

 Score = 113 (44.8 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q G++ +  ++ D+ T + RG+GFV F SE
Sbjct:    86 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 140


>ZFIN|ZDB-GENE-040426-2516 [details] [associations]
            symbol:zgc:77052 "zgc:77052" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-2516 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441
            HOVERGEN:HBG002295 GeneTree:ENSGT00700000104347 InterPro:IPR012956
            Pfam:PF08143 OrthoDB:EOG42BX9K EMBL:FP085391 EMBL:BC066681
            IPI:IPI00497482 RefSeq:NP_998467.1 UniGene:Dr.75633 SMR:Q6NYA1
            STRING:Q6NYA1 Ensembl:ENSDART00000098408 GeneID:406594
            KEGG:dre:406594 OMA:EIKTYFS NextBio:20818146 Uniprot:Q6NYA1
        Length = 309

 Score = 134 (52.2 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 23/62 (37%), Positives = 41/62 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGLS+DT++  LKD F + GE+++  +  D  TG+SRG+GF+ F    +    +++
Sbjct:    46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105

Query:    88 MD 89
              +
Sbjct:   106 KE 107

 Score = 110 (43.8 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 22/66 (33%), Positives = 39/66 (59%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+F+GGL+ +T E  +++ FG  GEI  +++  D  T + RG+ F+ F  E A  + +++
Sbjct:   130 KIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILEK 189

Query:    88 MDGLVC 93
                 VC
Sbjct:   190 KYHNVC 195


>RGD|1310724 [details] [associations]
            symbol:Snrnp35 "small nuclear ribonucleoprotein 35 (U11/U12)"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0005689 "U12-type spliceosomal complex" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310724
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HSSP:Q9V535 eggNOG:COG0724 GO:GO:0005689 CTD:11066
            HOGENOM:HOG000006374 HOVERGEN:HBG104583 KO:K13155 OrthoDB:EOG4MSD0C
            EMBL:BC086435 IPI:IPI00189830 RefSeq:NP_001014149.1
            UniGene:Rn.79076 ProteinModelPortal:Q5U1W5 STRING:Q5U1W5
            GeneID:360803 KEGG:rno:360803 UCSC:RGD:1310724 InParanoid:Q5U1W5
            NextBio:674154 Genevestigator:Q5U1W5 Uniprot:Q5U1W5
        Length = 244

 Score = 131 (51.2 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 25/64 (39%), Positives = 42/64 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LF+  L+  T E  LK+ F ++G+I  ++++ D VTG S+GY F+++  E A  +A ++ 
Sbjct:    53 LFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDA 112

Query:    89 DGLV 92
             DGLV
Sbjct:   113 DGLV 116


>UNIPROTKB|Q5U1W5 [details] [associations]
            symbol:Snrnp35 "U11/U12 small nuclear ribonucleoprotein 35
            kDa protein" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1310724 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q9V535 eggNOG:COG0724
            GO:GO:0005689 CTD:11066 HOGENOM:HOG000006374 HOVERGEN:HBG104583
            KO:K13155 OrthoDB:EOG4MSD0C EMBL:BC086435 IPI:IPI00189830
            RefSeq:NP_001014149.1 UniGene:Rn.79076 ProteinModelPortal:Q5U1W5
            STRING:Q5U1W5 GeneID:360803 KEGG:rno:360803 UCSC:RGD:1310724
            InParanoid:Q5U1W5 NextBio:674154 Genevestigator:Q5U1W5
            Uniprot:Q5U1W5
        Length = 244

 Score = 131 (51.2 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 25/64 (39%), Positives = 42/64 (65%)

Query:    29 LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEM 88
             LF+  L+  T E  LK+ F ++G+I  ++++ D VTG S+GY F+++  E A  +A ++ 
Sbjct:    53 LFVARLNSQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDA 112

Query:    89 DGLV 92
             DGLV
Sbjct:   113 DGLV 116


>UNIPROTKB|O43347 [details] [associations]
            symbol:MSI1 "RNA-binding protein Musashi homolog 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0009725 "response to
            hormone stimulus" evidence=IEA] [GO:0030855 "epithelial cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0007399 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            EMBL:AB012851 EMBL:AC003982 EMBL:AB072590 EMBL:AB072591
            EMBL:AB072592 EMBL:AB073212 IPI:IPI00001007 RefSeq:NP_002433.1
            UniGene:Hs.158311 ProteinModelPortal:O43347 SMR:O43347
            IntAct:O43347 MINT:MINT-1432501 STRING:O43347 PhosphoSite:O43347
            PaxDb:O43347 PRIDE:O43347 DNASU:4440 Ensembl:ENST00000257552
            GeneID:4440 KEGG:hsa:4440 UCSC:uc001tye.1 CTD:4440
            GeneCards:GC12M120779 HGNC:HGNC:7330 HPA:CAB022337 MIM:603328
            neXtProt:NX_O43347 PharmGKB:PA31137 InParanoid:O43347 OMA:GLPGSHP
            OrthoDB:EOG48GW3J GenomeRNAi:4440 NextBio:17313 ArrayExpress:O43347
            Bgee:O43347 CleanEx:HS_MSI1 Genevestigator:O43347
            GermOnline:ENSG00000135097 Uniprot:O43347
        Length = 362

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

 Score = 113 (44.8 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q G++ +  ++ D+ T + RG+GFV F SE
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160


>MGI|MGI:107376 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009725
            "response to hormone stimulus" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107376 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0009725 GO:GO:0005844
            GO:GO:0030855 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 OMA:GLPGSHP OrthoDB:EOG48GW3J
            EMBL:D49654 EMBL:AK084019 IPI:IPI00121300 IPI:IPI00462260
            RefSeq:NP_032655.1 UniGene:Mm.5077 PDB:1UAW PDB:2MSS PDB:2MST
            PDB:2RS2 PDBsum:1UAW PDBsum:2MSS PDBsum:2MST PDBsum:2RS2
            ProteinModelPortal:Q61474 SMR:Q61474 STRING:Q61474
            PhosphoSite:Q61474 PaxDb:Q61474 PRIDE:Q61474 DNASU:17690
            Ensembl:ENSMUST00000150779 GeneID:17690 KEGG:mmu:17690
            UCSC:uc008zdu.1 UCSC:uc008zdv.1 InParanoid:Q61474 ChiTaRS:MSI1
            EvolutionaryTrace:Q61474 NextBio:292270 Bgee:Q61474 CleanEx:MM_MSI1
            Genevestigator:Q61474 GermOnline:ENSMUSG00000054256 Uniprot:Q61474
        Length = 362

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

 Score = 112 (44.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q G++ +  ++ D+ T + RG+GFV F SE
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160


>RGD|628778 [details] [associations]
            symbol:Msi1 "musashi RNA-binding protein 1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=NAS] [GO:0003727 "single-stranded RNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
            evidence=IEA;ISO] [GO:0008266 "poly(U) RNA binding"
            evidence=IEA;ISO] [GO:0009725 "response to hormone stimulus"
            evidence=IMP] [GO:0030855 "epithelial cell differentiation"
            evidence=IEP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

 Score = 112 (44.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q G++ +  ++ D+ T + RG+GFV F SE
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160


>UNIPROTKB|Q8K3P4 [details] [associations]
            symbol:Msi1 "RNA-binding protein Musashi homolog 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0009725 GO:GO:0005844 GO:GO:0030855
            eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411
            CTD:4440 OrthoDB:EOG48GW3J EMBL:AY043393 IPI:IPI00202463
            RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4
            SMR:Q8K3P4 STRING:Q8K3P4 PhosphoSite:Q8K3P4 GeneID:259272
            KEGG:rno:259272 NextBio:624325 ArrayExpress:Q8K3P4
            Genevestigator:Q8K3P4 Uniprot:Q8K3P4
        Length = 362

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

 Score = 112 (44.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q G++ +  ++ D+ T + RG+GFV F SE
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 160


>UNIPROTKB|E2RK48 [details] [associations]
            symbol:MSI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K14411
            GeneTree:ENSGT00700000104255 CTD:4440 EMBL:AAEX03014735
            RefSeq:XP_854252.2 Ensembl:ENSCAFT00000016345 GeneID:611488
            KEGG:cfa:611488 Uniprot:E2RK48
        Length = 362

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 26/60 (43%), Positives = 40/60 (66%)

Query:    28 KLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKE 87
             K+FIGGLS+ T +  L++ FGQ GE+ E  V+ D +T +SRG+GFV F  +A   + + +
Sbjct:    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

 Score = 105 (42.0 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 22/55 (40%), Positives = 35/55 (63%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS +T    +K  F Q  ++ +  ++ D+ T + RG+GFV F SE
Sbjct:   106 TRTKKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESE 160


>FB|FBgn0260943 [details] [associations]
            symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737
            EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005844 eggNOG:COG0724 KO:K14411 GeneTree:ENSGT00700000104255
            GO:GO:0048864 OMA:ENYISAA EMBL:AY122226 EMBL:S51715 PIR:F48110
            RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2
            UniGene:Dm.22292 HSSP:Q61474 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5
            DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255
            EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169
            UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5
            OrthoDB:EOG4MSBF6 GenomeRNAi:39919 NextBio:816085 Bgee:Q9VVE5
            Uniprot:Q9VVE5
        Length = 369

 Score = 135 (52.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%)

Query:    24 NSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGE 83
             N   K+FIGGLS+ T+   L+D FG++G+I E  V+ D  T +SRG+GFV F+   +  +
Sbjct:    26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85

Query:    84 AIK----EMDG 90
              +     E+DG
Sbjct:    86 VLTQGTHELDG 96

 Score = 106 (42.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 24/55 (43%), Positives = 34/55 (61%)

Query:    25 SRTK-LFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASE 78
             +RTK +F+GGLS  T    +K  F Q G I +  ++ D+ T + RG+GFV F SE
Sbjct:   115 TRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSE 169


>DICTYBASE|DDB_G0275971 [details] [associations]
            symbol:DDB_G0275971 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0275971
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000013
            eggNOG:NOG260394 RefSeq:XP_643377.1 ProteinModelPortal:Q552K5
            EnsemblProtists:DDB0203538 GeneID:8620261 KEGG:ddi:DDB_G0275971
            InParanoid:Q552K5 Uniprot:Q552K5
        Length = 699

 Score = 139 (54.0 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 29/72 (40%), Positives = 45/72 (62%)

Query:     7 SVRFSHSVRFTRLLSDANSRTKLFIGGLSYDTNETVLKDAFGQHGEIIEVKVICDRVTGQ 66
             S+  S S  F+   S ++  TK+F+GG+S+  +E  LK  F Q G ++E K+I D  T +
Sbjct:    85 SLSSSSSSTFSS--SSSSKCTKIFVGGISWKADENTLKTYFLQFGNVLECKIIMDYNTNK 142

Query:    67 SRGYGFVKFASE 78
             S+GYGF+ F +E
Sbjct:   143 SKGYGFITFENE 154

WARNING:  HSPs involving 1157 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.387    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      105       105   0.00091  102 3  11 22  0.41    30
                                                     29  0.39    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1407
  No. of states in DFA:  529 (56 KB)
  Total size of DFA:  108 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.87u 0.15s 10.02t   Elapsed:  00:00:00
  Total cpu time:  9.88u 0.15s 10.03t   Elapsed:  00:00:00
  Start:  Fri May 10 12:25:28 2013   End:  Fri May 10 12:25:28 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with GR-RBP2 GR-RBP2 GR-RBP2 AT4G13850	protein from Arabidopsis thaliana	1.1e-16
BLAST match view associations BLAST with GRP4 GRP4 GRP4 AT3G23830	protein from Arabidopsis thaliana	3.3e-15
BLAST match view associations BLAST with GR-RBP3 GR-RBP3 GR-RBP3 AT5G61030	protein from Arabidopsis thaliana	1.1e-14
BLAST match view associations BLAST with AT3G08000 AT3G08000 AT3G08000	protein from Arabidopsis thaliana	2.1e-13
BLAST match view associations BLAST with GR-RBP5 GR-RBP5 GR-RBP5 AT1G74230	protein from Arabidopsis thaliana	4.3e-13
BLAST match view associations BLAST with RPS19 RPS19 RPS19 AT5G47320	protein from Arabidopsis thaliana	4.4e-13
BLAST match view associations BLAST with ORRM1 ORRM1 ORRM1 AT3G20930	protein from Arabidopsis thaliana	1.1e-12
BLAST match view associations BLAST with blt801 blt801 blt801 Glycine-rich RNA-binding protein blt801	protein from Hordeum vulgare	1.2e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	2.4e-12
BLAST match view associations BLAST with AT1G17640 AT1G17640 AT1G17640	protein from Arabidopsis thaliana	3.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	3.1e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Cricetulus griseus	3.1e-12
BLAST match view associations BLAST with CBU_1183 CBU_1183 CBU_1183 Glycine-rich RNA-binding protein	protein from Coxiella burnetii RSA 493	3.1e-12
BLAST match view associations BLAST with CBU_1183 CBU_1183 CBU_1183 nucleic acid binding domain protein	protein from Coxiella burnetii RSA 493	3.1e-12
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	protein from Mus musculus	3.1e-12
BLAST match view associations BLAST with Cirbp Cirbp Cirbp cold inducible RNA binding protein	gene from Rattus norvegicus	3.1e-12
BLAST match view associations BLAST with GRP7 GRP7 GRP7 AT2G21660	protein from Arabidopsis thaliana	3.1e-12
BLAST match view associations BLAST with cirbp cirbp cirbp cold inducible RNA binding protein	gene_product from Danio rerio	3.1e-12
BLAST match view associations BLAST with RBMY1A1 RBMY1A1 RBMY1A1 RNA-binding motif protein, Y chromosome, family 1 member B	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with RBMXL1 RBMXL1 RBMXL1 RNA binding motif protein, X-linked-like-1	protein from Homo sapiens	4.4e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	4.9e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Bos taurus	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Canis lupus familiaris	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Sus scrofa	5.0e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Pongo abelii	5.0e-12
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome, N-terminally processed	protein from Homo sapiens	5.2e-12
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	5.9e-12
BLAST match view associations BLAST with ATRZ-1A ATRZ-1A ATRZ-1A AT3G26420	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with CCR1 CCR1 CCR1 AT4G39260	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with AT5G06210 AT5G06210 AT5G06210	protein from Arabidopsis thaliana	6.4e-12
BLAST match view associations BLAST with CIRBP CIRBP CIRBP cDNA FLJ52850, moderately similar to Cold-inducible RNA-binding protein	protein from Homo sapiens	6.5e-12
BLAST match view associations BLAST with AT3G07810 AT3G07810 AT3G07810	protein from Arabidopsis thaliana	7.2e-12
BLAST match view associations BLAST with cirbp-b cirbp-b cirbp-b Cold-inducible RNA-binding protein B	protein from Xenopus laevis	1.0e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Cold-inducible RNA-binding protein	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Gallus gallus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Sus scrofa	1.2e-11
BLAST match view associations BLAST with Rbmx Rbmx Rbmx RNA binding motif protein, X-linked	gene from Rattus norvegicus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Rbmx	protein from Bos taurus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Homo sapiens	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Pan troglodytes	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX RNA-binding motif protein, X chromosome	protein from Macaca fascicularis	1.2e-11
BLAST match view associations BLAST with Rbmx Rbmx Rbmx RNA binding motif protein, X chromosome	protein from Mus musculus	1.2e-11
BLAST match view associations BLAST with RBMX RBMX RBMX Uncharacterized protein	protein from Canis lupus familiaris	1.2e-11
BLAST match view associations BLAST with Rbmxl1 Rbmxl1 Rbmxl1 RNA binding motif protein, X linked-like-1	protein from Mus musculus	1.5e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RBM24 protein	protein from Bos taurus	1.7e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Homo sapiens	1.7e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 Uncharacterized protein	protein from Sus scrofa	2.1e-11
BLAST match view associations BLAST with rbm24a rbm24a rbm24a RNA binding motif protein 24a	gene_product from Danio rerio	2.2e-11
BLAST match view associations BLAST with AtRZ-1b AtRZ-1b AtRZ-1b AT1G60650	protein from Arabidopsis thaliana	2.4e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with cirbp-a cirbp-a cirbp-a Cold-inducible RNA-binding protein A	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with rbm24-a rbm24-a rbm24-a RNA-binding protein 24-A	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with rbm24 rbm24 rbm24 RNA-binding protein 24	protein from Xenopus (Silurana) tropicalis	2.8e-11
BLAST match view associations BLAST with rbm24-b rbm24-b rbm24-b RNA-binding protein 24-B	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	protein from Mus musculus	2.8e-11
BLAST match view associations BLAST with Rbm38 Rbm38 Rbm38 RNA binding motif protein 38	gene from Rattus norvegicus	2.8e-11
BLAST match view associations BLAST with RBMY1D RBMY1D RBMY1D RNA-binding motif protein, Y chromosome, family 1 member D	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBMY1E RBMY1E RBMY1E RNA-binding motif protein, Y chromosome, family 1 member E	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBMY1J RBMY1J RBMY1J RNA-binding motif protein, Y chromosome, family 1 member F/J	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with RBM24 RBM24 RBM24 RNA-binding protein 24	protein from Gallus gallus	2.8e-11
BLAST match view associations BLAST with rbm24b rbm24b rbm24b RNA binding motif protein 24b	gene_product from Danio rerio	2.8e-11
BLAST match view associations BLAST with RBMY1B RBMY1B RBMY1B RNA-binding motif protein, Y chromosome, family 1 member B	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1E RBMY1E RBMY1E RNA-binding motif protein, Y chromosome, family 1 member E	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1D RBMY1D RBMY1D RNA-binding motif protein, Y chromosome, family 1 member D	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1A1 RBMY1A1 RBMY1A1 RNA-binding motif protein, Y chromosome, family 1 member A1	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1C RBMY1C RBMY1C RNA-binding motif protein, Y chromosome, family 1 member C	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBMY1F RBMY1F RBMY1F RNA-binding motif protein, Y chromosome, family 1 member F/J	protein from Homo sapiens	3.2e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	3.5e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 RNA-binding protein 38	protein from Homo sapiens	3.5e-11
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	protein from Mus musculus	3.5e-11
BLAST match view associations BLAST with Rbm24 Rbm24 Rbm24 RNA binding motif protein 24	gene from Rattus norvegicus	3.5e-11
BLAST match view associations BLAST with zgc:112425 zgc:112425 zgc:112425	gene_product from Danio rerio	3.5e-11
BLAST match view associations BLAST with AT4G26650 AT4G26650 AT4G26650	protein from Arabidopsis thaliana	3.5e-11
BLAST match view associations BLAST with Rbmxrtl Rbmxrtl Rbmxrtl RNA binding motif protein, X chromosome retrogene-like	gene from Rattus norvegicus	4.2e-11
BLAST match view associations BLAST with Rbmxl1 Rbmxl1 Rbmxl1 RNA binding motif protein, X-linked-like 1	gene from Rattus norvegicus	4.2e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with CIRBP CIRBP CIRBP Uncharacterized protein	protein from Gallus gallus	4.5e-11
BLAST match view associations BLAST with cirbp cirbp cirbp Cold-inducible RNA-binding protein	protein from Rana catesbeiana	4.5e-11
BLAST match view associations BLAST with Rbm3 Rbm3 Rbm3 RNA binding motif protein 3	protein from Mus musculus	4.5e-11
BLAST match view associations BLAST with RBM38 RBM38 RBM38 Uncharacterized protein	protein from Bos taurus	5.8e-11
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	5.8e-11
BLAST match view associations BLAST with RNPC1 RNPC1 RNPC1 Uncharacterized protein	protein from Sus scrofa	5.8e-11
BLAST match view associations BLAST with AT5G54580 AT5G54580 AT5G54580	protein from Arabidopsis thaliana	5.8e-11