BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034046
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6R3V7|VMA21_AJECN Vacuolar ATPase assembly integral membrane protein VMA21
OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=VMA21
PE=3 SV=1
Length = 108
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 2 AAVVKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFY 61
++V+ K + ++ M APL + + + G ++ +G LA ISVN+V+ Y
Sbjct: 33 SSVIIKLVLVTVAMICAPLGTYFGTLNTICGGDSSY--------AGALAAISVNVVLIIY 84
Query: 62 IYMAMREPSDKHEPDPK 78
+ +A RE + + E + K
Sbjct: 85 LIIAAREDTGESEEERK 101
>sp|P76460|ATOE_ECOLI Short-chain fatty acids transporter OS=Escherichia coli (strain
K12) GN=atoE PE=1 SV=1
Length = 440
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 36 NLTPYSATLLSGFLAVISVNIVIA--FYIYMAMREPSDKHEPDPKFLAEAKASVSQPTDK 93
L P TL SGF I+V +++ F M M +PSD DPK L E +A + K
Sbjct: 174 GLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLME-EADFQKQLPK 232
Query: 94 AEVSSESLKKKE 105
SE L++
Sbjct: 233 DAPPSERLEESR 244
>sp|B4UN04|VMA21_CANGA Vacuolar ATPase assembly integral membrane protein VMA21
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=VMA21 PE=3 SV=1
Length = 78
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 3 AVVKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFYI 62
+V+KK ++ M + PL + H LT S T++SG LA + N+V+ YI
Sbjct: 8 SVIKKLVFFTVAMVVLPLLTFFTLQH--------LT--SNTIISGGLAALMANVVLVGYI 57
Query: 63 YMAMREPSDKHEPDPK 78
A E + ++ P+ K
Sbjct: 58 IAAFTEDTTEYAPEGK 73
>sp|P41806|VMA21_YEAST Vacuolar ATPase assembly integral membrane protein VMA21
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VMA21 PE=1 SV=1
Length = 77
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 43 TLLSGFLAVISVNIVIAFYIYMAMREPSDKHEPD 76
TL+SG LA N+V+ YI +A RE ++ H+ D
Sbjct: 38 TLISGGLAAAMANVVLIVYIVVAFREDTEDHKVD 71
>sp|A6ZV87|VMA21_YEAS7 Vacuolar ATPase assembly integral membrane protein VMA21
OS=Saccharomyces cerevisiae (strain YJM789) GN=VMA21
PE=3 SV=1
Length = 77
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 43 TLLSGFLAVISVNIVIAFYIYMAMREPSDKHEPD 76
TL+SG LA N+V+ YI +A RE ++ H+ D
Sbjct: 38 TLISGGLAAAMANVVLIVYIVVAFREDTEDHKVD 71
>sp|B3LIC1|VMA21_YEAS1 Vacuolar ATPase assembly integral membrane protein VMA21
OS=Saccharomyces cerevisiae (strain RM11-1a) GN=VMA21
PE=3 SV=1
Length = 77
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 43 TLLSGFLAVISVNIVIAFYIYMAMREPSDKHEPD 76
TL+SG LA N+V+ YI +A RE ++ H+ D
Sbjct: 38 TLISGGLAAAMANVVLIVYIVVAFREDTEDHKVD 71
>sp|Q5B905|VMA21_EMENI Vacuolar ATPase assembly integral membrane protein VMA21
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=vma21 PE=3 SV=2
Length = 111
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 41 SATLLSGFLAVISVNIVIAFYIYMAMREPSDKHEPDPKFLAEAKA 85
++T ++G +A + NI++ YIY+A +E ++ E D AKA
Sbjct: 66 ASTTVAGIIAAVMANIILFLYIYVAWQEDKEEREADAARRKGAKA 110
>sp|C6Y4C8|VMA21_SCHPO Vacuolar ATPase assembly integral membrane protein vma21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vma21 PE=3 SV=1
Length = 88
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 43 TLLSGFLAVISVNIVIAFYIYMAMREPSDKHEPDPK 78
TL +G A + VNI++A YI A RE S + D K
Sbjct: 51 TLYAGLSAAVMVNIILALYIVAAFREDSGTPKKDIK 86
>sp|Q07835|YXXF_BACSU Uncharacterized transporter YxxF OS=Bacillus subtilis (strain 168)
GN=yxxF PE=3 SV=2
Length = 311
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 10 IASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFYIYMAMREP 69
+ S +W A+ YAF L G NL+PY+ T L L VI I+I F + A +
Sbjct: 158 MGSGIIWAVLAALFYAFTTLLGKGIHNLSPYTTTFLQTGLGVI---ILIPFIHFGAFADL 214
Query: 70 SDKH 73
S +
Sbjct: 215 SQGN 218
>sp|A5JYQ9|VMA21_CAEEL Vacuolar ATPase assembly integral membrane protein VMA21
OS=Caenorhabditis elegans GN=pdcd-2 PE=2 SV=1
Length = 102
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 34/74 (45%)
Query: 5 VKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFYIYM 64
VK S+ + + PLA ++ G ++ A S +AV+ V++V+ +++
Sbjct: 28 VKNLLTYSLVILIVPLASMFLLKQFFFEGLLGVSANDALTYSAIIAVVLVHVVLGIWLFA 87
Query: 65 AMREPSDKHEPDPK 78
A ++ K + +
Sbjct: 88 ATKQEDRKKRENKQ 101
>sp|B8JLV7|VMA21_DANRE Vacuolar ATPase assembly integral membrane protein VMA21 OS=Danio
rerio GN=vma21 PE=3 SV=1
Length = 104
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 1 MAAVVKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAF 60
+ +V+K ++ M P+ + + L + + + + LAV++V++V+A
Sbjct: 26 LVSVLKTLLFFTILMITLPIGLYFTSKSLLFEATLGYSSNDSYFYAAILAVLAVHVVLAL 85
Query: 61 YIYMAMREPSDK 72
++Y+A E S +
Sbjct: 86 FVYVAWNEGSRQ 97
>sp|P44051|ATOE_HAEIN Short-chain fatty acids transporter OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=atoE PE=4
SV=1
Length = 447
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 36 NLTPYSATLLSGFLAVISVNIVIA--FYIYMAMREPSDKHEPDPKFLAEAKASVSQPTDK 93
+ P +TL SG+ I++++VI F YM M + + DPK +A + + DK
Sbjct: 181 GIIPAVSTLFSGYNIFITLSLVICLPFITYMMMPKNGETKSIDPKLIAP-DPTFDKKLDK 239
Query: 94 AEVSSESLKKKE 105
+E +++
Sbjct: 240 DATLAEKMEESR 251
>sp|Q9NIV1|E2AK3_DROME Eukaryotic translation initiation factor 2-alpha kinase
OS=Drosophila melanogaster GN=PEK PE=1 SV=2
Length = 1162
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 19 PLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFYIYMAMR 67
PL + A NHN + TP SAT+L+G +A S Y+Y+ M+
Sbjct: 891 PLTLALAQNHNNNQNGSQPTPSSATILNGTVAKPS-----KVYLYIQMQ 934
>sp|O64781|Y1639_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase
At1g61390 OS=Arabidopsis thaliana GN=At1g61390 PE=2 SV=1
Length = 831
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 33/58 (56%)
Query: 44 LLSGFLAVISVNIVIAFYIYMAMREPSDKHEPDPKFLAEAKASVSQPTDKAEVSSESL 101
++ G +S+ +++ F Y + R + ++EP+P F+ ++ + ++ + +VS +L
Sbjct: 450 IILGTTVSLSIFVILVFAAYKSWRYRTKQNEPNPMFIHSSQDAWAKDMEPQDVSGVNL 507
>sp|Q2HDV5|VMA21_CHAGB Vacuolar ATPase assembly integral membrane protein VMA21
OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 /
DSM 1962 / NBRC 6347 / NRRL 1970) GN=VMA21 PE=3 SV=1
Length = 114
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 3 AVVKKFFIASMFMWMAPLAILYAFNHNLLPGSTNLTPYSATLLSGFLAVISVNIVIAFYI 62
+V+ K ++ M + P+ +A ++ G++ +G LA I N+V+ YI
Sbjct: 39 SVIMKLLAFTLGMIVIPIGSYFATVDSVFNGNSTY--------AGALAAIMANVVLIGYI 90
Query: 63 YMAMREP-SDKHE 74
++AM E SD+ E
Sbjct: 91 FVAMAEDQSDQQE 103
>sp|C4JXN2|RRG9_UNCRE Required for respiratory growth protein 9, mitochondrial
OS=Uncinocarpus reesii (strain UAMH 1704) GN=RRG9 PE=3
SV=1
Length = 221
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 48 FLAVISVNIVIAFYIYMAM--REPSDKHEPDPKFLAEAKASVSQPTDKAEVSSESLKKK 104
F VIS + + Y A +P+ PDP +AE K + QP + V ++LKKK
Sbjct: 54 FGNVISGRLSDSNYCRYASTNSKPTSPESPDP--IAEKKTTKKQPQQQWRVQKDALKKK 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,324,760
Number of Sequences: 539616
Number of extensions: 1055787
Number of successful extensions: 3190
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3169
Number of HSP's gapped (non-prelim): 27
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)