BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034049
(105 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YCN|A Chain A, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|1YCN|B Chain B, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|2Q4C|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
pdb|2Q4C|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
Length = 317
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLT--TGNLKAATEVICSRTPS 59
Y EDL K L ELS E A+LLW +P RDA++ + T + + EV C+RT +
Sbjct: 57 YGEDLLKTLDKELSNDFERAILLWTLEPGERDALLANEATKRWTSSNQVLMEVACTRTST 116
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLFYLRY 102
Q+ RQ YH+++ LE+D+ HT+GD K+ VSL+ RY
Sbjct: 117 QLLHARQAYHARYKKSLEEDVAHHTTGDFRKL-LVSLVTSYRY 158
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 36 VVRNSLT-TGNLKAA-TEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEY 93
V+R+++ TG + A T ++ +R +++I + Y + + LE I + T GD+EK+
Sbjct: 250 VLRSAINKTGTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKM-L 308
Query: 94 VSLL 97
V+LL
Sbjct: 309 VALL 312
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ R+ Q ++IRQ YH +G L + + S D E+
Sbjct: 37 ILAHRSAEQRKVIRQAYHETYGEDLLKTLDKELSNDFERA 76
>pdb|3BRX|A Chain A, Crystal Structure Of Calcium-Bound Cotton Annexin Gh1
Length = 317
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLT--TGNLKAATEVICSRTPS 59
Y EDL K L ELS E VLLW DPA RDA++ + T + + E+ C+R+ +
Sbjct: 58 YGEDLLKALDKELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSAN 117
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q+ RQ YH+++ LE+D+ HT+GD K+
Sbjct: 118 QLLHARQAYHARYKKSLEEDVAHHTTGDFHKL 149
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 48 AATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
A T V+C+R +++I Y + V L I + T GD+EK+
Sbjct: 264 ALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKL 307
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLL 97
V+ +R+ +QI HY +++G +DI + D K E+++LL
Sbjct: 193 VLATRSKAQINATLNHYKNEYG----NDINKDLKAD-PKDEFLALL 233
>pdb|1N00|A Chain A, Annexin Gh1 From Cotton
Length = 321
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLT--TGNLKAATEVICSRTPS 59
Y EDL K L ELS E VLLW DPA RDA++ + T + + E+ C+R+ +
Sbjct: 62 YGEDLLKALDKELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSAN 121
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q+ RQ YH+++ LE+D+ HT+GD K+
Sbjct: 122 QLLHARQAYHARYKKSLEEDVAHHTTGDFHKL 153
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 48 AATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
A T V+C+R +++I Y + V L I + T GD+EK+
Sbjct: 268 ALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKL 311
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLL 97
V+ +R+ +QI HY +++G +DI + D K E+++LL
Sbjct: 197 VLATRSKAQINATLNHYKNEYG----NDINKDLKAD-PKDEFLALL 237
>pdb|1DK5|A Chain A, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
pdb|1DK5|B Chain B, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
Length = 322
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSL---TTGNLKAATEVICSRTP 58
+ EDL K L EL+ E VL+W DP+ RDA + + + T N E+ C+R+P
Sbjct: 65 FGEDLLKELDRELTHDFEKLVLVWTLDPSERDAHLAKEATKRWTKSNF-VLVELACTRSP 123
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLFYLRY 102
++ L R+ YH+++ LE+D+ HT+GDH K+ V L+ RY
Sbjct: 124 KELVLAREAYHARYKKSLEEDVAYHTTGDHRKL-LVPLVSSYRY 166
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 45 NLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
N K ++ RT +Q +LIRQ Y FG L ++ R + D EK+
Sbjct: 38 NEKLIISILAHRTAAQRKLIRQTYAETFGEDLLKELDRELTHDFEKL 84
>pdb|1BCZ|A Chain A, Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SELSGK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELSGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 28.5 bits (62), Expect = 0.99, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K SG EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELSGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1HVD|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA ++++L N K TE+I SRTP
Sbjct: 59 LFGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 118
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 119 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 28.5 bits (62), Expect = 0.95, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ +Q Q I + + FG L DD+K +G EK+
Sbjct: 40 LLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKL 79
>pdb|1ANW|A Chain A, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANW|B Chain B, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANX|A Chain A, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|B Chain B, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|C Chain C, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
Length = 319
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA ++++L N K TE+I SRTP
Sbjct: 59 LFGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 118
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 119 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ +Q Q I + + FG L DD+K +G EK+
Sbjct: 40 LLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKL 79
>pdb|1AVH|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1AVH|B Chain B, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
Length = 320
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA ++++L N K TE+I SRTP
Sbjct: 60 LFGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 119
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 120 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 157
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ +Q Q I + + FG L DD+K +G EK+
Sbjct: 41 LLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKL 80
>pdb|2H0M|A Chain A, Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1BC0|A Chain A, Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1N41|A Chain A, Crystal Structure Of Annexin V K27e Mutant
Length = 319
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|2H0K|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
pdb|2H0K|B Chain B, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 57 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 116
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 117 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ +Q Q I + + + FG L +D+K +G EK+
Sbjct: 38 LLTARSNAQRQQIAEEFETLFGRDLVNDMKSELTGKFEKL 77
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|2IE6|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Xenon
pdb|2IE7|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Nitrous Oxide
Length = 318
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 57 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 116
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 117 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 17 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 76
Query: 91 V 91
+
Sbjct: 77 L 77
>pdb|1N44|A Chain A, Crystal Structure Of Annexin V R23e Mutant
Length = 319
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ +Q Q I + + + FG L +D+K +G EK+
Sbjct: 39 LLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKL 78
>pdb|1A8A|A Chain A, Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B|A Chain A, Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 319
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|2RAN|A Chain A, Rat Annexin V Crystal Structure: Ca2+-Induced
Conformational Changes
Length = 316
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 57 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 116
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 117 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 154
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 17 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 76
Query: 91 V 91
+
Sbjct: 77 L 77
>pdb|1BCW|A Chain A, Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELAGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELAGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1HVF|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK + ++ M DA ++++L N K TE+I SRTP
Sbjct: 59 LFGRDLLDDLKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 118
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 119 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
>pdb|2H0L|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 57 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 116
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 117 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLL 154
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 17 DAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFETLFGRDLVNDMKSELTGKFEK 76
Query: 91 V 91
+
Sbjct: 77 L 77
>pdb|1HVE|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
pdb|1HVG|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK + ++ M DA ++++L N K TE+I SRTP
Sbjct: 59 LFGRDLLDDLKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 118
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 119 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 156
>pdb|1N42|A Chain A, Crystal Structure Of Annexin V R149e Mutant
Length = 319
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL+GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQEMLVVLL 155
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K +G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1BCY|A Chain A, Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELKGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ TSG ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLL 155
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1BC1|A Chain A, Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k,
S228k, S303k)
Length = 319
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELKGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ T G ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTKGYYQRMLVVLL 155
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|1BC3|A Chain A, Recombinant Rat Annexin V, Triple Mutant (T72k, S144k,
S228k)
Length = 319
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL + SEL GK E ++ M DA ++++L + K TE+I SRTP
Sbjct: 58 LFGRDLVNDMKSELKGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTP 117
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G +LEDD+ T G ++++ V L
Sbjct: 118 EELRAIKQAYEEEYGSNLEDDVVGDTKGYYQRMLVVLL 155
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 33 DAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
DA V+R ++ + + ++ +R+ +Q Q I + + + FG L +D+K G EK
Sbjct: 18 DAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELKGKFEK 77
Query: 91 V 91
+
Sbjct: 78 L 78
>pdb|2XO2|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Azidohomoalanine
pdb|2XO3|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Homopropargylglycine
Length = 320
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ DA ++++L N K TE+I SRTP
Sbjct: 60 LFGRDLLDDLKSELTGKFEKLIVALXKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTP 119
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG +++ V L
Sbjct: 120 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRXLVVLL 157
Score = 28.5 bits (62), Expect = 0.97, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ +Q Q I + + FG L DD+K +G EK+
Sbjct: 41 LLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKL 80
>pdb|1SAV|A Chain A, Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA ++++L N K TE+I SRT
Sbjct: 60 LFGRDLLDDLKSELTGKFEKLIVALMKXSRLYDAYELKHALKGAGTNEKVLTEIIASRTX 119
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++ I+Q Y ++G LEDD+ TSG ++++ V L
Sbjct: 120 EELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLL 157
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ +Q Q I + + FG L DD+K +G EK+
Sbjct: 41 LLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEKL 80
>pdb|1YII|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Ca2+
pdb|1YJ0|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Zn2+
Length = 320
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA +++++ N K TE++ SRTP
Sbjct: 59 LFGRDLVDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTP 118
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++Q I+Q Y ++ +LED I TSG +++ V L
Sbjct: 119 AEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLL 156
Score = 38.9 bits (89), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 2 YSEDLCKRLSSELSGKLE--MAVLLWMH-DPAGR--DAVVVRNS---LTTGNLKAATE-- 51
Y +L +++ E SG + + VLL + DP GR +A+V +++ G LK T+
Sbjct: 132 YEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVDEALVEKDAQVLFRAGELKWGTDEE 191
Query: 52 ----VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ S ++ + Y + G +E+ I R TSGD EK+
Sbjct: 192 TFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKL 235
>pdb|1ALA|A Chain A, Structure Of Chicken Annexin V At 2.25-Angstroms
Resolution
Length = 321
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTP 58
++ DL L SEL+GK E ++ M DA +++++ N K TE++ SRTP
Sbjct: 60 LFGRDLVDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTP 119
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
+++Q I+Q Y ++ +LED I TSG +++ V L
Sbjct: 120 AEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLL 157
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 2 YSEDLCKRLSSELSGKLE--MAVLLWMH-DPAGR--DAVVVRNS---LTTGNLKAATE-- 51
Y +L +++ E SG + + VLL + DP GR +A+V +++ G LK T+
Sbjct: 133 YEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVEEALVEKDAQVLFRAGELKWGTDEE 192
Query: 52 ----VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ S ++ + Y + G +E+ I R TSGD EK+
Sbjct: 193 TFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKL 236
>pdb|1W45|A Chain A, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus.
pdb|1W45|B Chain B, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus
Length = 327
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAAT--EVICSRTPS 59
+ +DL + L SELSGK E ++ M+ P +A + +++ K E++ SRT +
Sbjct: 67 FGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKN 126
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q++ I + Y +G LE+DI+ TSG E++
Sbjct: 127 QLREIMKAYEEDYGSSLEEDIQADTSGYLERI 158
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 45 NLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLF 98
N +A +V+ R+ +Q Q I + + ++FG L + +K SG E++ V+L++
Sbjct: 40 NEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERL-IVALMY 92
>pdb|1W3W|A Chain A, The 2.1 Angstroem Resolution Structure Of Annexin A8
Length = 327
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAAT--EVICSRTPS 59
+ +DL + L SELSGK E ++ M+ P +A + +++ K E++ SRT +
Sbjct: 67 FGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKN 126
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q++ I + Y +G LE+DI+ TSG E++
Sbjct: 127 QLREIMKAYEEDYGSSLEEDIQADTSGYLERI 158
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 45 NLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLF 98
N +A +V+ R+ +Q Q I + + ++FG L + +K SG E++ V+L++
Sbjct: 40 NEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERL-IVALMY 92
>pdb|1AOW|A Chain A, Annexin Iv
Length = 309
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 5 DLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAA--TEVICSRTPSQIQ 62
DL L SELSG E +L M D VR ++ E++ SRTP +I+
Sbjct: 53 DLMDDLKSELSGNFEQVILGMMTPTVLYDVQEVRKAMKGAGTDEGCLIEILASRTPEEIR 112
Query: 63 LIRQHYHSKFGVHLEDDIKRHTS 85
I Q Y ++G LEDDI+ TS
Sbjct: 113 RINQTYQLQYGRSLEDDIRSDTS 135
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 30 AGRDAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGD 87
A DA +R ++ + A V+ R+ +Q Q IR Y + G L DD+K SG+
Sbjct: 6 AAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGN 65
Query: 88 HEKV 91
E+V
Sbjct: 66 FEQV 69
>pdb|1W7B|A Chain A, Annexin A2: Does It Induce Membrane Aggregation By A New
Multimeric State Of The Protein
Length = 339
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 4 EDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTT--GNLKAATEVICSRTPSQI 61
++L L S LSG LE +L + PA DA ++ S+ + + E+ICSRT ++
Sbjct: 81 KELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 140
Query: 62 QLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q I + Y + LE DI TSGD K+
Sbjct: 141 QEINRVYKEMYKTDLEKDIISDTSGDFRKL 170
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 31/105 (29%)
Query: 5 DLCKRLSSELSGKLEMAVL----------LWMHD--------PAGRDAVVVRNSLTTGNL 46
D+ + + E+ G LE A L L+ D RD V++R
Sbjct: 239 DMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIR-------- 290
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ + IR + K+G L I++ T GD++K
Sbjct: 291 -----IMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKA 330
>pdb|2HYU|A Chain A, Human Annexin A2 With Heparin Tetrasaccharide Bound
pdb|2HYV|A Chain A, Human Annexin A2 With Heparin Hexasaccharide Bound
pdb|2HYW|A Chain A, Human Annexin A2 With Calcium Bound
pdb|2HYW|B Chain B, Human Annexin A2 With Calcium Bound
Length = 308
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 4 EDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTT--GNLKAATEVICSRTPSQI 61
++L L S LSG LE +L + PA DA ++ S+ + + E+ICSRT ++
Sbjct: 50 KELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 109
Query: 62 QLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q I + Y + LE DI TSGD K+
Sbjct: 110 QEINRVYKEMYKTDLEKDIISDTSGDFRKL 139
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 31/105 (29%)
Query: 5 DLCKRLSSELSGKLEMAVL----------LWMHD--------PAGRDAVVVRNSLTTGNL 46
D+ + + E+ G LE A L L+ D RD V++R
Sbjct: 208 DMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIR-------- 259
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ SR+ + IR + K+G L I++ T GD++K
Sbjct: 260 -----IMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKA 299
>pdb|1XJL|A Chain A, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
pdb|1XJL|B Chain B, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
Length = 319
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 4 EDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTT--GNLKAATEVICSRTPSQI 61
++L L S LSG LE +L + PA DA ++ S+ + + E+ICSRT ++
Sbjct: 61 KELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQEL 120
Query: 62 QLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q I + Y + LE DI TSGD K+
Sbjct: 121 QEINRVYKEMYKTDLEKDIISDTSGDFRKL 150
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEK 90
K ++ SR+ + IR + K+G L I++ T GD++K
Sbjct: 266 KVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQK 309
>pdb|1ANN|A Chain A, Annexin Iv
Length = 318
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 5 DLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAA--TEVICSRTPSQIQ 62
DL L SELSG E +L M D +R ++ E++ SRTP +I+
Sbjct: 62 DLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIR 121
Query: 63 LIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
I Q Y ++G LEDDI+ TS ++V
Sbjct: 122 RINQTYQLQYGRSLEDDIRSDTSFMFQRV 150
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 30 AGRDAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGD 87
A DA +R ++ + A V+ R+ +Q Q IR Y + G L DD+K SG+
Sbjct: 15 AAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGN 74
Query: 88 HEKV 91
E+V
Sbjct: 75 FEQV 78
>pdb|1I4A|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant T6d
Of Annexin Iv
Length = 318
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 5 DLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAA--TEVICSRTPSQIQ 62
DL L SELSG E +L M D +R ++ E++ SRTP +I+
Sbjct: 62 DLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIR 121
Query: 63 LIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
I Q Y ++G LEDDI+ TS ++V
Sbjct: 122 RINQTYQLQYGRSLEDDIRSDTSFMFQRV 150
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 30 AGRDAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGD 87
A DA +R ++ + A V+ R+ +Q Q IR Y + G L DD+K SG+
Sbjct: 15 AAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGN 74
Query: 88 HEKV 91
E+V
Sbjct: 75 FEQV 78
>pdb|1AVC|A Chain A, Bovine Annexin Vi (Calcium-Bound)
Length = 673
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTPS 59
+ DL L SELSG L +L M PA DA ++ ++ + KA E++ +RT +
Sbjct: 409 FGRDLMADLKSELSGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNA 468
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
+IQ I + Y + LED + TSG +++
Sbjct: 469 EIQAINKAYKEDYHKTLEDALSSDTSGHFKRI 500
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLT--TGNLKAATEVICSRTP 58
+Y +DL L EL+GK E ++ M PA DA ++++++ + K E++ SRT
Sbjct: 65 LYGKDLIADLKYELTGKFERLIVGLMRPPAYADAKEIKDAISGIGTDEKCLIEILASRTN 124
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
QI + Y + LE DI TSG K+ V L
Sbjct: 125 EQIHQLVAAYKDAYERDLEADITGDTSGHFRKMLVVLL 162
Score = 33.1 bits (74), Expect = 0.039, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 51 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGD 87
++I R+ +Q Q IRQ + S FG L D+K SGD
Sbjct: 388 DIITHRSNAQRQQIRQTFKSHFGRDLMADLKSELSGD 424
Score = 29.6 bits (65), Expect = 0.43, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVV--------VRNSLTTGNLKAATE-- 51
Y DL ++ + SG +++ + D VV V++ G LK T+
Sbjct: 138 YERDLEADITGDTSGHFRKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEA 197
Query: 52 ----VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ ++L+ Y G +E I+ SGD EK+
Sbjct: 198 QFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKL 241
Score = 28.9 bits (63), Expect = 0.68, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 32 RDAVVVRNSLTT--GNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
+DA + N++ + +A +I SR+ Q Q I Q+Y S +G L D+K +G E
Sbjct: 24 QDAETLYNAMKGFGSDKEAIINLITSRSNKQRQEICQNYKSLYGKDLIADLKYELTGKFE 83
Query: 90 KV 91
++
Sbjct: 84 RL 85
>pdb|2ZOC|A Chain A, Crystal Structure Of Recombinant Human Annexin Iv
pdb|2ZOC|B Chain B, Crystal Structure Of Recombinant Human Annexin Iv
Length = 319
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 5 DLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAA--TEVICSRTPSQIQ 62
DL L SELSG E ++ M D +R ++ E++ SRTP +I+
Sbjct: 63 DLIDDLKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIR 122
Query: 63 LIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
I Q Y ++G LEDDI+ TS ++V
Sbjct: 123 RISQTYQQQYGRSLEDDIRSDTSFMFQRV 151
Score = 32.7 bits (73), Expect = 0.052, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 48 AATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
A V+ R +Q Q IR Y S G L DD+K SG+ E+V
Sbjct: 36 AIISVLAYRNTAQRQEIRTAYKSTIGRDLIDDLKSELSGNFEQV 79
Score = 30.8 bits (68), Expect = 0.18, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 4 EDLCKRLSSELSGKLE---MAVLLWMHDPAGRDAVVVRNSLTTGNLKAAT--EVICSRTP 58
+D+ + + SE SG E +A++ M + + A + S+ T V+ SR
Sbjct: 218 KDIEQSIKSETSGSFEDALLAIVKCMRNKSAYFAEKLYKSMKGLGTDDNTLIRVMVSRAE 277
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
+ IR H+ +G L IK TSGD+ KV
Sbjct: 278 IDMLDIRAHFKRLYGKSLYSFIKGDTSGDYRKV 310
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTPS 59
Y ++L L +LSG E ++ + PA DA ++ S+ N A E++ +RT
Sbjct: 64 YGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSR 123
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q++ I Q Y++ + L DDI TSGD K
Sbjct: 124 QMKDISQAYYTVYKKSLGDDISSETSGDFRKA 155
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
++ R+ +Q QLI + Y + +G L+DD+K SG E
Sbjct: 44 ILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFE 81
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
++ SR+ + IR + +G L IK TSGD+E
Sbjct: 275 IMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYE 312
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDP------------AGRDAVVV----RNSLTTG 44
+Y + L +SSE SG A LL + D A +DA ++ N T
Sbjct: 135 VYKKSLGDDISSETSGDFRKA-LLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTD 193
Query: 45 NLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLFYLRYCV 104
K TE++C R+ Q++L Y + + D IK SG E LL + CV
Sbjct: 194 EDKF-TEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFE-----DLLLAIVNCV 247
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTPS 59
Y ++L L +LSG E ++ + PA DA ++ S+ N A E++ +RT
Sbjct: 64 YGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSR 123
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
Q++ I Q Y++ + L DDI TSGD K
Sbjct: 124 QMKDISQAYYTVYKKSLGDDISSETSGDFRKA 155
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
++ R+ +Q QLI + Y + +G L+DD+K SG E
Sbjct: 44 ILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFE 81
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 52 VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
++ SR+ + IR + +G L IK TSGD+E
Sbjct: 275 IMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYE 312
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDP------------AGRDAVVV----RNSLTTG 44
+Y + L +SSE SG A LL + D A +DA ++ N T
Sbjct: 135 VYKKSLGDDISSETSGDFRKA-LLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTD 193
Query: 45 NLKAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLFYLRYCV 104
K TE++C R+ Q++L Y + + D IK SG E LL + CV
Sbjct: 194 EDKF-TEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFE-----DLLLAIVNCV 247
>pdb|1M9I|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant
T356d Of Annexin Vi
Length = 672
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTG--NLKAATEVICSRTPS 59
+ DL L SE+SG L +L M PA DA ++ ++ + KA E++ +RT +
Sbjct: 408 FGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNA 467
Query: 60 QIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
+I+ I + Y + LED + TSG ++
Sbjct: 468 EIRAINEAYKEDYHKSLEDALSSDTSGHFRRI 499
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLT--TGNLKAATEVICSRTP 58
+Y +DL L EL+GK E ++ M PA DA ++++++ + K E++ SRT
Sbjct: 64 LYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTN 123
Query: 59 SQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSL 96
Q+ + Y + LE DI TSG +K+ V L
Sbjct: 124 EQMHQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLL 161
Score = 32.3 bits (72), Expect = 0.061, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 51 EVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGD 87
++I R+ Q Q IRQ + S FG L D+K SGD
Sbjct: 387 DIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISGD 423
Score = 29.6 bits (65), Expect = 0.46, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLLFYLRYC 103
+A ++I SR+ Q Q + Q Y S +G L D+K +G E++ V L+ YC
Sbjct: 40 EAILDIITSRSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERL-IVGLMRPPAYC 95
Score = 28.9 bits (63), Expect = 0.70, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 2 YSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVV--------VRNSLTTGNLKAATE-- 51
Y DL + + SG + +++ + D VV V++ G LK T+
Sbjct: 137 YERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGTDEA 196
Query: 52 ----VICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
++ +R+ ++L+ Y G +E I+ SGD EK+
Sbjct: 197 QFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKL 240
>pdb|2ZHI|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.58 A Resolution
pdb|2ZHJ|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.34 A Resolution
Length = 322
Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 5 DLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAA--TEVICSRTPSQIQ 62
DL + L SELS E +L M D +R ++ E++ SR P +I+
Sbjct: 66 DLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIR 125
Query: 63 LIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
I Q Y ++G LE+DI TS ++V
Sbjct: 126 RINQTYQQQYGRSLEEDICSDTSFMFQRV 154
>pdb|1AEI|A Chain A, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|B Chain B, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|C Chain C, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|D Chain D, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|E Chain E, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|F Chain F, Crystal Structure Of The Annexin Xii Hexamer
Length = 315
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
K+ T ++ +R+ +Q Q I+ Y + FG HLED++K SG++E
Sbjct: 33 KSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYE 75
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDP----AGRDAVVVRNSLTTGNLKAATEVICSR 56
++ + L L SELSG E A L + P A + ++ T N A +++C++
Sbjct: 57 LFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDEN--ALIDILCTQ 114
Query: 57 TPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLL 97
+ +QI I+ + + LE +I TSG+ +++ VS+L
Sbjct: 115 SNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRL-LVSML 154
>pdb|1DM5|A Chain A, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|B Chain B, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|C Chain C, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|D Chain D, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|E Chain E, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|F Chain F, Annexin Xii E105k Homohexamer Crystal Structure
Length = 315
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHE 89
K+ T ++ +R+ +Q Q I+ Y + FG HLED++K SG++E
Sbjct: 33 KSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGNYE 75
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDP----AGRDAVVVRNSLTTGNLKAATEVICSR 56
++ + L L SELSG E A L + P A + ++ T N A +++C++
Sbjct: 57 LFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKN--ALIDILCTQ 114
Query: 57 TPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKVEYVSLL 97
+ +QI I+ + + LE +I TSG+ +++ VS+L
Sbjct: 115 SNAQIHAIKAAFKLLYKEDLEKEIISETSGNFQRL-LVSML 154
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 10 LSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAAT--EVICSRTPSQIQLIRQH 67
L L+G LE L + PA DA +R ++ T E++ SRT +I+ I +
Sbjct: 96 LKKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRV 155
Query: 68 YHSKFGVHLEDDIKRHTSGDHEK 90
Y + L DI TSGD++K
Sbjct: 156 YKEELKRDLAKDITSDTSGDYQK 178
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
K ++ SR+ + I+ Y +G+ L I T GD+EK+
Sbjct: 294 KTLIRIMVSRSEIDMNDIKACYQKLYGISLCQAILDETKGDYEKI 338
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 6 LCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNLKAAT--EVICSRTPSQIQL 63
L + L L+G LE VL + PA DA +R ++ T E++ SRT +I+
Sbjct: 60 LDETLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRD 119
Query: 64 IRQHYHSKFGVHLEDDIKRHTSGD 87
I + Y + L DI TSGD
Sbjct: 120 INRVYREELKRDLAKDITSDTSGD 143
Score = 28.9 bits (63), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 47 KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKRHTSGDHEKV 91
KA ++ SR+ + I+ Y +G+ L I T GD+EK+
Sbjct: 262 KALIRIMVSRSEIDMNDIKAFYQKMYGISLCQAILDETKGDYEKI 306
>pdb|1XKH|A Chain A, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
Aeruginosa Pao1 Bound To Pyoverdine
pdb|1XKH|B Chain B, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
Aeruginosa Pao1 Bound To Pyoverdine
pdb|1XKH|C Chain C, Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas
Aeruginosa Pao1 Bound To Pyoverdine
Length = 687
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 40 SLTTGNLKAATEVICS--RTPSQIQLIRQHYHSKFGVHLEDDIKRHTSG 86
S T G + AT ++ + TP I ++ + FG++ DD+ RHT G
Sbjct: 18 SYTPGTIATATRLVLTPRETPQSITVVTRQNXDDFGLNNIDDVXRHTPG 66
>pdb|2IAH|A Chain A, Crystal Structure Of The Ferripyoverdine Receptor Of The
Outer Membrane Of Pseudomonas Aeruginosa Bound To
Ferripyoverdine.
pdb|2O5P|A Chain A, Crystal Structure Of The Full Length Ferric Pyoverdine
Outer Membrane Receptor Fpva Of Pseudomonas Aeruginosa
In Its Apo Form
pdb|2O5P|B Chain B, Crystal Structure Of The Full Length Ferric Pyoverdine
Outer Membrane Receptor Fpva Of Pseudomonas Aeruginosa
In Its Apo Form
pdb|2W16|A Chain A, Structures Of Fpva Bound To Heterologous Pyoverdines
pdb|2W16|B Chain B, Structures Of Fpva Bound To Heterologous Pyoverdines
pdb|2W6T|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Dsm50106)-Fe Complex
pdb|2W6T|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Dsm50106)-Fe Complex
pdb|2W6U|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(G173)-Fe Complex
pdb|2W6U|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(G173)-Fe Complex
pdb|2W75|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Apo-Fpva
pdb|2W75|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Apo-Fpva
pdb|2W76|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Pa6)-Fe Complex
pdb|2W76|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Pa6)-Fe Complex
pdb|2W77|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Pfl18.1)-Fe Complex
pdb|2W77|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Pfl18.1)-Fe Complex
pdb|2W78|A Chain A, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Atcc13535)-Fe Complex
pdb|2W78|B Chain B, Structures Of P. Aeruginosa Fpva Bound To Heterologous
Pyoverdines: Fpva-Pvd(Atcc13535)-Fe Complex
Length = 772
Score = 33.1 bits (74), Expect = 0.040, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 40 SLTTGNLKAATEVICS--RTPSQIQLIRQHYHSKFGVHLEDDIKRHTSG 86
S T G + AT ++ + TP I ++ + FG++ DD+ RHT G
Sbjct: 103 SYTPGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPG 151
>pdb|1QE0|A Chain A, Crystal Structure Of Apo S. Aureus Histidyl-Trna
Synthetase
pdb|1QE0|B Chain B, Crystal Structure Of Apo S. Aureus Histidyl-Trna
Synthetase
Length = 420
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 26 MHDPAGRDAVVVRNSLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED------- 78
M D A R AV + N L +KA + + + Q++ +KF + + D
Sbjct: 337 MGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQA-DRLGAKFTIVIGDQELENNK 395
Query: 79 -DIKRHTSGDHEKVEYVSLLFYLR 101
D+K T+G+ E +E +L+ Y +
Sbjct: 396 IDVKNMTTGESETIELDALVEYFK 419
>pdb|1SW0|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Hinge Mutant K174l, T175w
pdb|1SW0|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Hinge Mutant K174l, T175w
Length = 248
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 27 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 65
>pdb|1SW3|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
pdb|1SW3|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
Length = 248
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 27 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 65
>pdb|1SSD|A Chain A, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SSD|B Chain B, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|A Chain A, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|B Chain B, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1TPU|A Chain A, S96p Change Is A Second-Site Suppressor For H95n
Sluggish Mutant Triosephosphate Isomerase
pdb|1TPU|B Chain B, S96p Change Is A Second-Site Suppressor For H95n
Sluggish Mutant Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1SW7|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
pdb|1SW7|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
Length = 248
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 27 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 65
>pdb|1SQ7|A Chain A, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SQ7|B Chain B, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1TPV|A Chain A, S96p Change Is A Second-Site Suppressor For H95n
Sluggish Mutant Triosephosphate Isomerase
pdb|1TPV|B Chain B, S96p Change Is A Second-Site Suppressor For H95n
Sluggish Mutant Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1TPC|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPC|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1SU5|A Chain A, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SU5|B Chain B, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1SPQ|A Chain A, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
pdb|1SPQ|B Chain B, Understanding Protein Lids: Structural Analysis Of
Active Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1TPB|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPB|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|3EGO|A Chain A, Crystal Structure Of Probable 2-Dehydropantoate
2-Reductase Pane From Bacillus Subtilis
pdb|3EGO|B Chain B, Crystal Structure Of Probable 2-Dehydropantoate
2-Reductase Pane From Bacillus Subtilis
Length = 307
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 58 PSQIQLIRQHYHSKFGVHLEDDIKRHTSG 86
P ++ ++ QH HS F ++ E D R +G
Sbjct: 152 PDRLNILFQHNHSDFPIYYETDWYRLLTG 180
>pdb|1TPH|1 Chain 1, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|1TPH|2 Chain 2, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|8TIM|A Chain A, Triose Phosphate Isomerase
pdb|8TIM|B Chain B, Triose Phosphate Isomerase
Length = 247
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|3IZX|D Chain D, 3.1 Angstrom Cryoem Structure Of Cytoplasmic Polyhedrosis
Virus
pdb|3IZX|E Chain E, 3.1 Angstrom Cryoem Structure Of Cytoplasmic Polyhedrosis
Virus
Length = 448
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 29 PAGRDAVVVRNSLTTGNLKAATEVICSRTPSQIQLIRQHYHS 70
PAG +A+V N T N K + + ++ ++ L HS
Sbjct: 312 PAGENALVRHNRYMTENFKGLSPIALAQKKHEMMLHTHEIHS 353
>pdb|3J17|D Chain D, Structure Of A Transcribing Cypovirus By Cryo-Electron
Microscopy
pdb|3J17|E Chain E, Structure Of A Transcribing Cypovirus By Cryo-Electron
Microscopy
Length = 448
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 29 PAGRDAVVVRNSLTTGNLKAATEVICSRTPSQIQLIRQHYHS 70
PAG +A+V N T N K + + ++ ++ L HS
Sbjct: 312 PAGENALVRHNRYMTENFKGLSPIALAQKKHEMMLHTHEIHS 353
>pdb|1TPW|A Chain A, Triosephosphate Isomerase Drinks Water To Keep Healthy
pdb|1TPW|B Chain B, Triosephosphate Isomerase Drinks Water To Keep Healthy
Length = 247
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
>pdb|1TIM|A Chain A, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
pdb|1TIM|B Chain B, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
Length = 247
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 40 SLTTGNLKAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78
+L L A TEV+C + RQ +K GV ++
Sbjct: 26 TLDGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQN 64
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,073,295
Number of Sequences: 62578
Number of extensions: 101529
Number of successful extensions: 399
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 234
Number of HSP's gapped (non-prelim): 135
length of query: 105
length of database: 14,973,337
effective HSP length: 70
effective length of query: 35
effective length of database: 10,592,877
effective search space: 370750695
effective search space used: 370750695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)