Query 034049
Match_columns 105
No_of_seqs 117 out of 1016
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 15:34:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hyv_A Annexin A2; calcium-bin 100.0 3.2E-30 1.1E-34 184.5 9.7 102 1-102 47-153 (308)
2 1hm6_A Annexin 1; phospholipid 100.0 3.3E-30 1.1E-34 186.8 9.9 104 1-104 87-194 (346)
3 1axn_A Annexin III; annexin fa 100.0 6.2E-30 2.1E-34 184.0 9.9 103 1-103 63-169 (323)
4 2zhj_A Annexin A4; zynogen gra 100.0 1.5E-29 5.2E-34 181.9 9.6 103 1-103 62-168 (322)
5 1yii_A Annexin A5, annexin V, 100.0 4.2E-29 1.4E-33 179.4 9.9 103 1-103 59-165 (320)
6 1dm5_A Annexin XII E105K mutan 100.0 2.6E-29 9E-34 180.2 8.8 102 1-102 57-162 (315)
7 3chj_A Alpha-14 giardin; calci 100.0 4.8E-29 1.6E-33 180.2 9.7 101 1-101 54-160 (337)
8 1n00_A Annexin GH1; membrane-b 100.0 7.4E-29 2.5E-33 178.2 9.6 102 1-102 61-166 (321)
9 1w3w_A Annexin A8; coagulation 100.0 1.5E-28 5.3E-33 176.9 9.6 102 1-102 66-171 (327)
10 1m9i_A Annexin VI; calcium-bin 100.0 3.2E-28 1.1E-32 188.2 9.8 104 1-104 64-171 (672)
11 1m9i_A Annexin VI; calcium-bin 99.9 4.4E-28 1.5E-32 187.5 10.0 102 1-102 407-512 (672)
12 2ii2_A Alpha-11 giardin; helix 99.9 5.3E-28 1.8E-32 173.1 9.2 100 1-101 47-153 (310)
13 4evf_A Alpha-1 giardin, giardi 99.9 1.1E-27 3.6E-32 170.5 8.8 100 1-101 45-151 (295)
14 1w3w_A Annexin A8; coagulation 99.9 2.1E-27 7.3E-32 171.0 6.3 97 1-97 223-326 (327)
15 1dm5_A Annexin XII E105K mutan 99.9 3.8E-27 1.3E-31 168.9 5.8 96 1-96 213-315 (315)
16 1yii_A Annexin A5, annexin V, 99.9 9.4E-27 3.2E-31 167.2 5.5 97 1-97 215-318 (320)
17 1n00_A Annexin GH1; membrane-b 99.9 4.4E-27 1.5E-31 169.0 3.4 98 1-98 216-320 (321)
18 2zhj_A Annexin A4; zynogen gra 99.9 2.9E-26 1E-30 164.8 6.7 97 1-97 218-321 (322)
19 2hyv_A Annexin A2; calcium-bin 99.9 4.4E-26 1.5E-30 163.0 7.4 97 1-97 204-307 (308)
20 1axn_A Annexin III; annexin fa 99.9 3.9E-26 1.3E-30 164.2 6.4 100 1-100 135-250 (323)
21 1hm6_A Annexin 1; phospholipid 99.9 1.4E-25 4.7E-30 162.6 4.7 100 1-100 159-274 (346)
22 3chj_A Alpha-14 giardin; calci 99.9 7.9E-24 2.7E-28 152.9 6.8 96 1-98 211-315 (337)
23 4evf_A Alpha-1 giardin, giardi 99.9 1.7E-23 5.7E-28 148.9 8.0 97 1-99 117-226 (295)
24 2ii2_A Alpha-11 giardin; helix 99.9 1.5E-23 5.1E-28 150.0 7.7 98 1-98 119-230 (310)
25 1r4t_A Exoenzyme S; EXOS, GAP, 55.0 11 0.00038 23.8 2.9 83 4-86 37-138 (153)
26 1he1_A Exoenzyme S, EXOS; sign 51.4 17 0.0006 22.5 3.4 71 3-73 34-121 (135)
27 4aj5_1 SKA3, spindle and kinet 45.4 13 0.00043 22.0 1.9 26 47-73 76-101 (101)
28 3frr_A Uncharacterized protein 41.7 20 0.00067 23.6 2.7 40 47-86 100-144 (191)
29 1mty_G Methane monooxygenase h 37.3 30 0.001 22.0 2.9 53 24-76 62-119 (162)
30 1zl8_A LIN-7; heterodimer, alp 35.2 49 0.0017 17.0 3.6 36 34-72 12-53 (53)
31 1mhy_G Methane monooxygenase h 35.2 31 0.0011 22.1 2.7 53 24-76 66-123 (169)
32 2etv_A Iron(III) ABC transport 34.6 20 0.00069 24.9 2.0 30 63-93 307-336 (346)
33 3ok8_A Brain-specific angiogen 34.6 62 0.0021 21.8 4.3 68 17-84 38-114 (222)
34 3gna_A RAG-1, V(D)J recombinat 34.6 31 0.0011 19.5 2.4 35 12-46 53-92 (96)
35 3ks4_A Polymerase cofactor VP3 29.4 45 0.0015 21.3 2.8 55 29-83 64-124 (184)
36 3ggy_A Increased sodium tolera 28.6 26 0.00091 23.0 1.7 40 47-86 107-150 (193)
37 1j2j_B ADP-ribosylation factor 27.0 52 0.0018 16.4 2.2 26 47-72 11-36 (45)
38 2z16_A Matrix protein 1, M1; A 25.7 81 0.0028 19.8 3.4 41 28-68 26-71 (165)
39 2nvo_A RO sixty-related protei 25.3 1.2E+02 0.0041 22.7 5.0 47 36-82 141-190 (535)
40 3k6g_A Telomeric repeat-bindin 25.2 94 0.0032 18.4 3.5 37 68-104 20-60 (111)
41 3fke_A Polymerase cofactor VP3 24.7 42 0.0014 20.3 1.9 52 30-81 10-67 (129)
42 3t57_A UDP-N-acetylglucosamine 22.7 78 0.0027 21.6 3.3 27 55-81 230-262 (305)
43 1wj7_A Hypothetical protein (R 22.6 1.3E+02 0.0044 17.8 4.5 43 49-91 27-71 (104)
44 1k8k_G P16, ARP2/3 complex 16 21.7 1.2E+02 0.0041 19.1 3.7 23 9-31 41-64 (151)
45 2wx4_A DCP1, decapping protein 20.9 51 0.0017 16.5 1.5 26 15-41 11-36 (46)
46 1c94_A Retro-GCN4 leucine zipp 20.8 30 0.001 16.1 0.6 13 2-14 20-32 (38)
No 1
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.96 E-value=3.2e-30 Score=184.48 Aligned_cols=102 Identities=31% Similarity=0.388 Sum_probs=98.5
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++|+||+|++++++|+.+|+.+||..|++||+|.|| ++||+||++|||.|++.|+++|++.||++|++
T Consensus 47 ~~g~dL~~~lk~elsG~fe~~l~~l~~~~~~~DA~~L~~AmkG~Gtde~~LieIL~~Rs~~q~~~Ik~aY~~~y~~~L~~ 126 (308)
T 2hyv_A 47 RTKKELASALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEK 126 (308)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHTSTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HhCccHHHHHHHHcCCCHHHHHHHHcCCcHHHHHHHHHHHhhcCCCCHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCHHH
Confidence 4899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccc-cccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLF-YLRY 102 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~-~~~~ 102 (105)
+|++++||+|+++ +|+.++| +|+.
T Consensus 127 di~se~sG~f~~ll~~l~~~~r~~e~~ 153 (308)
T 2hyv_A 127 DIISDTSGDFRKLMVALAKGRRAEDGS 153 (308)
T ss_dssp HHHHTCCHHHHHHHHHHHTCCCCCCCS
T ss_pred HHhhccCccHHHHHHHHHccccccccC
Confidence 9999999999999 9999998 6644
No 2
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.96 E-value=3.3e-30 Score=186.81 Aligned_cols=104 Identities=26% Similarity=0.303 Sum_probs=100.2
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++|+||+|++++++|+.+|+.+||..|++||+|.|| ++||+||++|||.|++.|+++|++.||++|++
T Consensus 87 ~~g~dL~~~lkselsG~fe~~l~~l~~~p~~~DA~~L~~AmkG~GTde~~LieIL~~Rsn~q~~~Ik~aY~~~y~~~Le~ 166 (346)
T 1hm6_A 87 EKGKPLDEALKKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVYKEELKRDLAK 166 (346)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHTSCCCHHH
T ss_pred HHCccHHHHHHHhcCccHHHHHHHHhCCcHHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhchhHHH
Confidence 3899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRYCV 104 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~~~ 104 (105)
+|++++||+|+++ +|+.++|+|+..|
T Consensus 167 di~se~sG~f~~ll~~L~~~~R~e~~~v 194 (346)
T 1hm6_A 167 DITSDTSGDYQKALLSLAKGDRSEDLAI 194 (346)
T ss_dssp HHHHHCCHHHHHHHHHHHTTCCCCCCSC
T ss_pred HHhhccCCcHHHHHHHHhhccccccCCC
Confidence 9999999999999 9999999886543
No 3
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.96 E-value=6.2e-30 Score=183.98 Aligned_cols=103 Identities=28% Similarity=0.352 Sum_probs=99.5
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++|+||+|++++++|+.+|+.+||..|++||+|+|| .+||+||++|||.|++.|+++|++.||++|++
T Consensus 63 ~~g~dL~~~lk~elsG~fe~~l~~l~~~p~~~DA~~L~~A~kG~Gtde~~lieIL~~Rs~~q~~~I~~aY~~~y~~~Le~ 142 (323)
T 1axn_A 63 AYGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDISQAYYTVYKKSLGD 142 (323)
T ss_dssp HHSCCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHCSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHCcCHHHHHhhhcCccHHHHHHHHhcCchHHHHHHHHHHhccCCCCHHHHhHHhcCCCHHHHHHHHHHHHHhhCcCHHH
Confidence 4899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhcccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRYC 103 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~~ 103 (105)
+|++++||+|+++ +|+.++|+|+..
T Consensus 143 di~se~sG~~~~ll~~l~~~~R~e~~~ 169 (323)
T 1axn_A 143 DISSETSGDFRKALLTLADGRRDESLK 169 (323)
T ss_dssp HHHHHCCHHHHHHHHHHHTTCSCCCSC
T ss_pred HHHHhcCcHHHHHHHHHHhcccccCCC
Confidence 9999999999999 999999987654
No 4
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.96 E-value=1.5e-29 Score=181.87 Aligned_cols=103 Identities=27% Similarity=0.310 Sum_probs=99.3
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||++|.++|++|+||+|++++++|+.+|+.+||..|++|++|+|| .+||+||++|||.|+++|+++|++.||++|++
T Consensus 62 ~~g~~L~~~lkselsG~fe~~l~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~ 141 (322)
T 2zhj_A 62 TIGRDLLEDLKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRINQTYQQQYGRSLEE 141 (322)
T ss_dssp HHCSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HhCchHHHHHHhhcCccHHHHHHHHcCCcHHHHHHHHHHhhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHH
Confidence 4899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhcccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRYC 103 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~~ 103 (105)
+|++++||+|+++ +|+.+.|+++..
T Consensus 142 di~~e~sG~~~~~l~~ll~~~r~e~~~ 168 (322)
T 2zhj_A 142 DICSDTSFMFQRVLVSLTAGGRDEGNY 168 (322)
T ss_dssp HHHHHCCHHHHHHHHHHHHCCCCCSCC
T ss_pred HHHhhcCchHHHHHHHHHhhccccccc
Confidence 9999999999999 999999987644
No 5
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.96 E-value=4.2e-29 Score=179.39 Aligned_cols=103 Identities=29% Similarity=0.422 Sum_probs=99.1
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++++||+|++++++|+.+|+.+||..|++|++|+|| .+||+||++|||.|+++|+++|++.||++|++
T Consensus 59 ~~g~~L~~dl~~e~sG~f~~ll~~l~~~~~~~DA~~L~~A~kg~Gtde~~lieIL~~Rs~~ql~~I~~aY~~~y~~~Le~ 138 (320)
T 1yii_A 59 LFGRDLVDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNIKQVYMQEYEANLED 138 (320)
T ss_dssp HHSCCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHCcCHHHHHhhhcCchHHHHHHHHccChHHHHHHHHHHHhccCCCchHHHhHHHhcCCHHHHHHHHHHHHHhhCcCHHH
Confidence 4899999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhcccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRYC 103 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~~ 103 (105)
+|.+++||+|+++ +|+.+.|++...
T Consensus 139 di~~e~sG~~~~~l~~l~~~~r~~~~~ 165 (320)
T 1yii_A 139 KITGETSGHFQRLLVVLLQANRDPDGR 165 (320)
T ss_dssp HHHHHCCHHHHHHHHHHHTTCCCCSCC
T ss_pred HHHhhcCCcHHHHHHHHHhhccCcccc
Confidence 9999999999999 999999987643
No 6
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.96 E-value=2.6e-29 Score=180.16 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=98.8
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++++||+|++++++|+.+|+.+||..||+|++|+|| .+||+||++|||.|+++|+++|++.||++|++
T Consensus 57 ~yg~~L~~dl~se~sG~f~~ll~~l~~~~~~~dA~~L~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~~Le~ 136 (315)
T 1dm5_A 57 LFGKHLEDELKSELSGNYEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKAAFKLLYKEDLEK 136 (315)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHHSSSCCHHHHHHHHSSCCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHCCCHHHHHHhhcCccHHHHHHHHccChhHHHHHHHHHHhhcCCCchhhhhhhHhcCCHHHHHHHHHHHHHHhCccHHH
Confidence 4899999999999999999999999999999999999999999999 88999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRY 102 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~ 102 (105)
+|.+++||+|+++ +|+++.|++..
T Consensus 137 dI~~e~sG~~~~~L~~lv~~~r~~~~ 162 (315)
T 1dm5_A 137 EIISETSGNFQRLLVSMLQGGRKEDE 162 (315)
T ss_dssp HHHHHCCHHHHHHHHHHHTTCCCTTC
T ss_pred HHHhccCchHHHHHHHHHccccCCCC
Confidence 9999999999999 99999998754
No 7
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.96 E-value=4.8e-29 Score=180.18 Aligned_cols=101 Identities=19% Similarity=0.177 Sum_probs=97.7
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||++|.++|++|+||+|++++++|+.+|+.+||+.||+||+|.|| ++||+|||+|+|.||..|+++|++.||++|++
T Consensus 54 ~~g~dL~~~lk~e~sG~fe~~l~~l~~~p~~~dA~~L~~AmkG~GTde~~LieIl~tRs~~~l~~Ik~~Y~~~y~~sL~~ 133 (337)
T 3chj_A 54 ITGTFLDAFLKKHLSKDFESLVLMLYKPRAQLLCELIRGATKGAGTDEKCLVDVLLTIETHEVREIRQLYYQLYNDSLGD 133 (337)
T ss_dssp HHSSCHHHHHHTTSCHHHHHHHHHHTSCHHHHHHHHHHHHHSSSSCCHHHHHHHHTTSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHCcCHHHHHHHhcCccHHHHHHHHhCChHHHHHHHHHHhccCCCCChHHhhhhhhcCCHHHHHHHHHHHHHHHhHHHHH
Confidence 3899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhcccccc--chh--hhcccccccc
Q 034049 79 DIKRHTSGDH--EKV--EYVSLLFYLR 101 (105)
Q Consensus 79 ~I~~~~sG~~--~~~--aL~~~~~~~~ 101 (105)
+|.+++||+| +++ +|+.+.|+|+
T Consensus 134 di~~~tsG~~~w~~lLl~ll~~~R~e~ 160 (337)
T 3chj_A 134 VVRKDCGDKYMWAKLINAVATGDRIPR 160 (337)
T ss_dssp HHHHHHCSSSHHHHHHHHHHHCCCCCC
T ss_pred HHHhhcCCCchHHHHHHHHHhcccCcc
Confidence 9999999999 999 9899988774
No 8
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.96 E-value=7.4e-29 Score=178.20 Aligned_cols=102 Identities=38% Similarity=0.609 Sum_probs=98.6
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++++||+|++++++|+.+|+.+||..|++|++|+|| .+||+|||+|||.|+++|+++|++.||++|++
T Consensus 61 ~y~~~L~~dl~se~sG~f~~ll~~l~~~~~~~dA~~l~~A~kg~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~~g~~Le~ 140 (321)
T 1n00_A 61 TYGEDLLKALDKELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSLEE 140 (321)
T ss_dssp HHSSCHHHHHHHHSCHHHHHHHHHHHSCHHHHHHHHHHHHHSSSCSSCHHHHHHHHSSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHhhHHHHHHHHhcCchHHHHHHHHcCChhHHHHHHHHHHhhccCCCHHHHHHHHhcCCHHHHHHHHHHHHHHhCccHHH
Confidence 3899999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRY 102 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~ 102 (105)
+|.+++||+|+++ +|+.+.|+++.
T Consensus 141 dI~~e~sG~~~~~L~~lv~~~r~~~~ 166 (321)
T 1n00_A 141 DVAHHTTGDFHKLLLPLVSSYRYEGE 166 (321)
T ss_dssp HHHHHCCHHHHHHHHHHHHCCCCCSC
T ss_pred HHHhccCcHHHHHHHHHHhcccCCCc
Confidence 9999999999999 99999998743
No 9
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.95 E-value=1.5e-28 Score=176.94 Aligned_cols=102 Identities=28% Similarity=0.371 Sum_probs=98.4
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||+++|++++||+|++++++|+.+|+.+||..||+|++|+|| .+||+||++||+.|+++|+++|++.||++|++
T Consensus 66 ~yg~~L~~dlkse~sG~f~~ll~~l~~~~~~~DA~~L~~A~~g~Gtde~~lieIL~tRs~~ql~~i~~~Y~~~yg~sLe~ 145 (327)
T 1w3w_A 66 QFGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEE 145 (327)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHSCTTHHHHHHHHHHHHSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HHCcCHHHHHHHHcCCcHHHHHHHhcCCHHHHHHHHHHHHhhccCCCHHHHHHHHHhCCHHHHHHHHHHHHHHhCccHHH
Confidence 4899999999999999999999999999999999999999999999 88999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRY 102 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~ 102 (105)
+|.+++||+|+++ +|+++.|++..
T Consensus 146 dI~~e~sG~~~~~L~~lv~~~r~~~~ 171 (327)
T 1w3w_A 146 DIQADTSGYLERILVCLLQGSRDDVS 171 (327)
T ss_dssp HHHHHCCHHHHHHHHHHHSCCCCCCC
T ss_pred HHhhccCchHHHHHHHHHHhccCCcc
Confidence 9999999999999 99999998843
No 10
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.95 E-value=3.2e-28 Score=188.22 Aligned_cols=104 Identities=29% Similarity=0.370 Sum_probs=100.4
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++|+||+|++++++|+.+|+++||..||+||+|.|| ++||+|||+|||.|+..|+++|+..||++|++
T Consensus 64 ~~gkdL~~~LkselsG~fe~~l~~l~~~p~~~dA~~l~~A~kG~gTde~~LiEIl~tRsn~ei~~ik~aY~~~y~~sLe~ 143 (672)
T 1m9i_A 64 LYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEA 143 (672)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHSCSCHHH
T ss_pred HHCCcHHHHHHHHcCCCHHHHHHHHcCCHHHHHHHHHHHHhcCCCCchHHHHHHHHcCCHHHHHHHHHHHHHHhCcchHH
Confidence 4899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRYCV 104 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~~~ 104 (105)
+|.+++||+|+++ +|+++.|+|...|
T Consensus 144 di~~dtsG~f~klLv~L~~~~R~e~~~v 171 (672)
T 1m9i_A 144 DIIGDTSGHFQKMLVVLLQGTREEDDVV 171 (672)
T ss_dssp HHHHHCCHHHHHHHHHHHHCCCCCSCCC
T ss_pred HHhccCCccHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999 9999999987544
No 11
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=99.95 E-value=4.4e-28 Score=187.48 Aligned_cols=102 Identities=27% Similarity=0.385 Sum_probs=99.2
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLED 78 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~ 78 (105)
+||+||.++|++|+||+|++++++|+.+|+.+||..|++||+|.|| ++||+|||+|||.|+.+|+++|+..|+++|++
T Consensus 407 ~~gkdL~~~LkselsG~fe~~i~~l~~~p~~~DA~~l~~A~kg~gTde~~LiEIL~tRsn~ei~~ik~aY~~~y~~sLe~ 486 (672)
T 1m9i_A 407 HFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLED 486 (672)
T ss_dssp HHSSCHHHHHHHHCCTHHHHHHHHHHSCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HhCchHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHHHHHHhccCCCHHHHHHhhhcCCHHHHHHHHHHHHHHHCcCHHH
Confidence 4899999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHhhccccccchh--hhccccccccc
Q 034049 79 DIKRHTSGDHEKV--EYVSLLFYLRY 102 (105)
Q Consensus 79 ~I~~~~sG~~~~~--aL~~~~~~~~~ 102 (105)
+|.+++||+|+++ +|+++.|+|+-
T Consensus 487 di~~dtsG~~~~llv~L~~~~R~e~~ 512 (672)
T 1m9i_A 487 ALSSDTSGHFRRILISLATGHREEGG 512 (672)
T ss_dssp HHHHHCCHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhccchHHHHHHHHHHhccCCcCC
Confidence 9999999999999 99999998864
No 12
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.95 E-value=5.3e-28 Score=173.07 Aligned_cols=100 Identities=16% Similarity=0.108 Sum_probs=96.9
Q ss_pred CccchHHHHHhhhc-chhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHH
Q 034049 1 MYSEDLCKRLSSEL-SGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLE 77 (105)
Q Consensus 1 ~y~~~L~~~l~~e~-sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~ 77 (105)
+||+||.++|++|+ ||+|++++++|+.+|+.+||..|++|++|+ | .+||+|||+|||.|++.|+++|++.||++|+
T Consensus 47 ~yg~dL~~~lksel~sG~fe~~l~~l~~~p~~~DA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~aY~~~y~~~Le 125 (310)
T 2ii2_A 47 TTGLEFIAFLKKCIKNGPYEDVMALGWDCNISARVNVIKKAMKNV-NDFRAIHDVVLIATPDERLKLAQAYKEKTGNDLL 125 (310)
T ss_dssp HHSSCHHHHHHHHSCSSHHHHHHHHHHSCHHHHHHHHHHHHHHSS-CCHHHHHHHHHSCCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHCccHHHHHHHhcCCCCHHHHHHHHhCCHHHHHHHHHHHHhhCC-CcHHHHHHHHHcCCHHHHHHHHHHHHHHHCcCHH
Confidence 48999999999999 999999999999999999999999999998 8 9999999999999999999999999999999
Q ss_pred HHHhhcccc--ccchh--hhcccccccc
Q 034049 78 DDIKRHTSG--DHEKV--EYVSLLFYLR 101 (105)
Q Consensus 78 ~~I~~~~sG--~~~~~--aL~~~~~~~~ 101 (105)
++|.+++|| +|+++ +|+.+.|++.
T Consensus 126 ~di~~e~sg~~~~~~ll~~ll~~~R~e~ 153 (310)
T 2ii2_A 126 QDFVDQIPLTSAASYLCHLAIRENRTPR 153 (310)
T ss_dssp HHHHHHCCSCSHHHHHHHHHHHCCCCCC
T ss_pred HHHHhhcCCchHHHHHHHHHHhccCCcc
Confidence 999999999 99999 9999999774
No 13
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.95 E-value=1.1e-27 Score=170.48 Aligned_cols=100 Identities=18% Similarity=0.200 Sum_probs=96.5
Q ss_pred CccchHHHHHhhhc-chhHHHHHHHHccCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHH
Q 034049 1 MYSEDLCKRLSSEL-SGKLEMAVLLWMHDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVHLE 77 (105)
Q Consensus 1 ~y~~~L~~~l~~e~-sg~~~~~l~~~~~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~ 77 (105)
+||+||.++|++++ ||+|++++++|+.+|+.+||..||+|++|. | .+||+||++|||.|+++|+++|++.||++|+
T Consensus 45 ~yg~~L~~~lk~el~sG~f~~~l~~l~~~~~~~dA~~L~~A~kg~-tde~~lieIL~~Rs~~~l~~I~~~Y~~~y~~~Le 123 (295)
T 4evf_A 45 SYGKELPDDIKKALKGGSEESLLMDLFSDRHEVRAQHIRDALSGR-NDHMAFFDTVILCTPEDWHETVAAYTRMFKKPLV 123 (295)
T ss_dssp HHSSCHHHHHHHHSCCSHHHHHHHHHTSCHHHHHHHHHHHHHHSS-CCHHHHHHHHTSCCHHHHHHHHHHHHHHHSSCHH
T ss_pred HHCcCHHHHHHhhccCCCHHHHHHHHccCchHHHHHHHHHHhhCC-CCHHHHHHHHHcCCHHHHHHHHHHHHHhccccHH
Confidence 48999999999999 899999999999999999999999999998 7 8999999999999999999999999999999
Q ss_pred HHHhhcc--ccccchh--hhcccccccc
Q 034049 78 DDIKRHT--SGDHEKV--EYVSLLFYLR 101 (105)
Q Consensus 78 ~~I~~~~--sG~~~~~--aL~~~~~~~~ 101 (105)
++|.+++ ||+|+++ +|+.+.|+++
T Consensus 124 ~di~~e~~~sG~~~~~L~~ll~~~r~e~ 151 (295)
T 4evf_A 124 EDFMKDVGRKEDWCLLMEKWMAHERVSR 151 (295)
T ss_dssp HHHHHHHCSSSHHHHHHHHHHHTCCCCC
T ss_pred HHHHhhcccCCcHHHHHHHHHhcccccC
Confidence 9999999 9999999 9999998764
No 14
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=99.94 E-value=2.1e-27 Score=171.01 Aligned_cols=97 Identities=23% Similarity=0.276 Sum_probs=92.8
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|.++|++++||+|+++|++++ .+|+.+||+.||+||+|.|| ++||+|+++|++.||..|+++|++.||++
T Consensus 223 ~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~fA~~L~~amkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~~yg~s 302 (327)
T 1w3w_A 223 IANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKT 302 (327)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HHCCCHHHHHhhhcCCcHHHHHHHHHHHcCCHHHHHHHHHHhhccCCCCChhHeeeeeeECCHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999998885 69999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhcccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSLL 97 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~~ 97 (105)
|.++|++++||||+++ +||++.
T Consensus 303 L~~~I~~~tsGdy~~~LlaL~~~~ 326 (327)
T 1w3w_A 303 LSSMIMEDTSGDYKNALLSLVGSD 326 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHCCC
T ss_pred HHHHHhhhCChHHHHHHHHHhCCC
Confidence 9999999999999999 998764
No 15
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=99.93 E-value=3.8e-27 Score=168.94 Aligned_cols=96 Identities=16% Similarity=0.278 Sum_probs=91.7
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|.++|++++||+|+++|++++ .+|+.++|+.||+||+|.|| ++||+|+++|++.||..|+++|++.||++
T Consensus 213 ~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~~ 292 (315)
T 1dm5_A 213 ISNKTILQAIENEFSGDIKNGLLAIVKSVENRFAYFAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQAMYGKS 292 (315)
T ss_dssp HSSSCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HhCCCHHHHHhhhcCchHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999998875 69999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSL 96 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~ 96 (105)
|.++|.+++||||+++ +||++
T Consensus 293 L~~~I~~etsGdy~~~Llal~~~ 315 (315)
T 1dm5_A 293 LYEFIADDCSGDYKDLLLQITGH 315 (315)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHCC
T ss_pred HHHHHhhhCcHHHHHHHHHHhCC
Confidence 9999999999999999 88863
No 16
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=99.93 E-value=9.4e-27 Score=167.19 Aligned_cols=97 Identities=22% Similarity=0.226 Sum_probs=91.5
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|.++|++++||+|+++|++++ .+|+.+||+.||+||+|.|| .+||+|+++|++.||..|+++|++.||++
T Consensus 215 ~~g~~L~~~I~~e~sGd~~~~Llalv~~~~~~~~~~A~~L~~a~~g~Gtd~~~Lirilv~Rse~dl~~Ik~~y~~~yg~~ 294 (320)
T 1yii_A 215 ISGFQIEETIDRETSGDLEKLLLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKS 294 (320)
T ss_dssp HHSSCHHHHHCCTTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HHCcCHHHHHhhhcCchHHHHHHHHHHhccCCcHHHHHHHHHhhccCCCcHHHHHHHHHhcCHHHHHHHHHHHHHhcCCC
Confidence 48999999999999999999998885 69999999999999999999 88999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhcccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSLL 97 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~~ 97 (105)
|.++|++++||||+++ +|+++.
T Consensus 295 L~~~I~~etsGdy~~~Llal~~~~ 318 (320)
T 1yii_A 295 LYQMIQKDTSGDYRKALLLLCGGD 318 (320)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHC--
T ss_pred HHHHHhhcCChHHHHHHHHHhCCC
Confidence 9999999999999999 998764
No 17
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=99.93 E-value=4.4e-27 Score=168.99 Aligned_cols=98 Identities=22% Similarity=0.311 Sum_probs=93.3
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|.++|++++||+|+++|++++ .+|+.+||+.||+||+|.|| .+||+|+++|++.||..|+++|++.||++
T Consensus 216 ~yg~~L~~~I~~e~sGd~~~~Ll~iv~~~~~~~~~~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~~yg~s 295 (321)
T 1n00_A 216 EYGNDINKDLKADPKDEFLALLRSTVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVP 295 (321)
T ss_dssp HHSSCTTGGGCSSTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HhCccHHHHHhhhcCchHHHHHHHHHHHhcCchHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999998885 69999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhccccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSLLF 98 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~~~ 98 (105)
|.++|++++||||+++ +|+++..
T Consensus 296 L~~~I~~etsGdy~~~Llal~~~~~ 320 (321)
T 1n00_A 296 LTRAIVKDTHGDYEKLLLVLAGHVE 320 (321)
T ss_dssp HHHHTTTTCCHHHHHHHHHHTTCCC
T ss_pred hHHHHhhhCCHHHHHHHHHHhCccC
Confidence 9999999999999999 9997654
No 18
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=99.93 E-value=2.9e-26 Score=164.77 Aligned_cols=97 Identities=26% Similarity=0.254 Sum_probs=91.4
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|+++|++++||+|+++|++++ .+|+.+||+.||+||+|+|| .+||+|+++|++.||..|++.|++.||++
T Consensus 218 ~~g~~Le~~I~~e~sGd~~~~Llalv~~~~~~~~~~A~~L~~a~~g~Gtde~~lirilv~Rs~~dl~~i~~~Y~~~yg~~ 297 (322)
T 2zhj_A 218 ISQKDIEQSIKSETSGSFEDALLAIVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFKRLYGKS 297 (322)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HHCcCHHHHHHHhcCccHHHHHHHHHHHhcCccHHHHHHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999999885 59999999999999999999 88999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhcccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSLL 97 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~~ 97 (105)
|.++|++++||||+++ +||++.
T Consensus 298 L~~~I~~etsGdy~~~Llal~~~~ 321 (322)
T 2zhj_A 298 LYSFIKGDTSGDYRKVLLILCGGD 321 (322)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHC--
T ss_pred HHHHHhhhCCcHHHHHHHHHhCCC
Confidence 9999999999999999 998764
No 19
>2hyv_A Annexin A2; calcium-binding protein, membrane-binding protein, helix BUN heparin, hexasaccharide, metal binding protein; HET: UAP SGN IDS; 1.42A {Homo sapiens} PDB: 2hyu_A* 2hyw_A 1w7b_A 1xjl_A
Probab=99.93 E-value=4.4e-26 Score=163.01 Aligned_cols=97 Identities=23% Similarity=0.252 Sum_probs=92.5
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHHHhcCCC
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYHSKFGVH 75 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~~~yg~~ 75 (105)
+||++|+++|++++||+|+++|++++ .+|+.++|+.||+||+|.|| .+||+||++|++.||..|+++|++.||++
T Consensus 204 ~~g~~Le~~I~~e~sG~~~~~L~~lv~~~~~~~~~~A~~L~~A~~g~GTde~~lirilv~Rs~~~l~~I~~~Y~~~yg~~ 283 (308)
T 2hyv_A 204 YSPYDMLESIRKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKS 283 (308)
T ss_dssp TCSSCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHHHHSSC
T ss_pred HHCcCHHHHHHHhcCchHHHHHHHHHhccCCCcHHHHHHHHHHhccCCCCHHHHHHHHHhcCHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999885 59999999999999999999 88999999999999999999999999999
Q ss_pred HHHHHhhccccccchh--hhcccc
Q 034049 76 LEDDIKRHTSGDHEKV--EYVSLL 97 (105)
Q Consensus 76 L~~~I~~~~sG~~~~~--aL~~~~ 97 (105)
|.++|++++||||+++ +||++.
T Consensus 284 L~~~I~~e~sGdy~~~Llal~~~~ 307 (308)
T 2hyv_A 284 LYYYIQQDTKGDYQKALLYLCGGD 307 (308)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHTSC
T ss_pred HHHHHHhhCChHHHHHHHHHhCCC
Confidence 9999999999999999 888753
No 20
>1axn_A Annexin III; annexin family, calcium/phospholipid-binding protein complex; 1.78A {Homo sapiens} SCOP: a.65.1.1 PDB: 1aii_A
Probab=99.92 E-value=3.9e-26 Score=164.17 Aligned_cols=100 Identities=26% Similarity=0.329 Sum_probs=93.8
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHccC-----------CHHHHHHHHHHHH-cCCCh--HHHHHHHhhCCHHHHHHHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMHD-----------PAGRDAVVVRNSL-TTGNL--KAATEVICSRTPSQIQLIRQ 66 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~~-----------~~~~dA~~L~~A~-~g~gt--~~li~il~~rs~~~l~~i~~ 66 (105)
+||++|+++|++++||+|++++++|+.. |+.+||..|++|+ +++|| .++|+||++||+.||+.|++
T Consensus 135 ~y~~~Le~di~se~sG~~~~ll~~l~~~~R~e~~~vd~~~a~~DA~~L~~A~~~~~Gtde~~li~Il~tRs~~~L~~i~~ 214 (323)
T 1axn_A 135 VYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFD 214 (323)
T ss_dssp HHSSCHHHHHHHHCCHHHHHHHHHHHTTCSCCCSCCCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred hhCcCHHHHHHHhcCcHHHHHHHHHHhcccccCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHhCCHHHHHHHHH
Confidence 4899999999999999999999999873 5899999999999 56899 88999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhccccccchh--hhccccccc
Q 034049 67 HYHSKFGVHLEDDIKRHTSGDHEKV--EYVSLLFYL 100 (105)
Q Consensus 67 ~Y~~~yg~~L~~~I~~~~sG~~~~~--aL~~~~~~~ 100 (105)
+|++.||++|+++|++++||+|+++ +++.+.|++
T Consensus 215 ~Y~~~~g~~Le~~I~~e~sG~~~~~Ll~lv~~~r~~ 250 (323)
T 1axn_A 215 EYRNISQKDIVDSIKGELSGHFEDLLLAIVNCVRNT 250 (323)
T ss_dssp HHHHHHSSCHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHhHhcCchHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999 999887765
No 21
>1hm6_A Annexin 1; phospholipid/Ca(2+)-binding protein, calcium-free form, FULL-length protein comprising protein core and N-terminal domain, metal; 1.80A {Sus scrofa} SCOP: a.65.1.1 PDB: 1mcx_A 1ain_A 1bo9_A
Probab=99.91 E-value=1.4e-25 Score=162.61 Aligned_cols=100 Identities=19% Similarity=0.202 Sum_probs=93.8
Q ss_pred CccchHHHHHhhhcchhHHHHHHHHcc-----------CCHHHHHHHHHHHH-cCCCh--HHHHHHHhhCCHHHHHHHHH
Q 034049 1 MYSEDLCKRLSSELSGKLEMAVLLWMH-----------DPAGRDAVVVRNSL-TTGNL--KAATEVICSRTPSQIQLIRQ 66 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg~~~~~l~~~~~-----------~~~~~dA~~L~~A~-~g~gt--~~li~il~~rs~~~l~~i~~ 66 (105)
+||++|+++|++++||+|++++++|+. +|+.+||..||+|+ +++|| .++++||++||+.|+++|++
T Consensus 159 ~y~~~Le~di~se~sG~f~~ll~~L~~~~R~e~~~vd~~~a~~DA~~L~~A~~~~~Gtde~~li~IL~tRS~~~L~~i~~ 238 (346)
T 1hm6_A 159 ELKRDLAKDITSDTSGDYQKALLSLAKGDRSEDLAINDDLADTDARALYEAGERRKGTDLNVFITILTTRSYPHLRRVFQ 238 (346)
T ss_dssp TSCCCHHHHHHHHCCHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHSCHHHHHHHHH
T ss_pred HhchhHHHHHhhccCCcHHHHHHHHhhccccccCCCCchHHHHHHHHHHHHHhccCCCcHHHHHHHHhcCCHHHHHHHHH
Confidence 589999999999999999999999987 55899999999998 55899 88999999999999999999
Q ss_pred HHHHhcCCCHHHHHhhccccccchh--hhccccccc
Q 034049 67 HYHSKFGVHLEDDIKRHTSGDHEKV--EYVSLLFYL 100 (105)
Q Consensus 67 ~Y~~~yg~~L~~~I~~~~sG~~~~~--aL~~~~~~~ 100 (105)
+|++.||++|+++|++++||+|+++ +++.+.+++
T Consensus 239 ~Y~~~~g~~Le~~I~~e~sG~~~~~L~~lv~~~r~~ 274 (346)
T 1hm6_A 239 KYSKYSKHDMNKVLDLELKGDIENCLTVVVKCATSK 274 (346)
T ss_dssp HHHTTCCCCTTSBCCCCCBHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHCcCHHHHHHHHcCchHHHHHHHHHhhcCCc
Confidence 9999999999999999999999999 888877654
No 22
>3chj_A Alpha-14 giardin; calcium-binding, annexin, metal binding protein; 1.60A {Giardia lamblia} PDB: 3chk_A 3chl_A
Probab=99.89 E-value=7.9e-24 Score=152.94 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=90.6
Q ss_pred Ccc-chHHHHHhhhcchhHHHHHHHHc---cCCHHHHHHHHHHHHcCCCh-HHHHHHHhh--CCHHHHHHHHHHHHHhcC
Q 034049 1 MYS-EDLCKRLSSELSGKLEMAVLLWM---HDPAGRDAVVVRNSLTTGNL-KAATEVICS--RTPSQIQLIRQHYHSKFG 73 (105)
Q Consensus 1 ~y~-~~L~~~l~~e~sg~~~~~l~~~~---~~~~~~dA~~L~~A~~g~gt-~~li~il~~--rs~~~l~~i~~~Y~~~yg 73 (105)
+|| ++|+++|++|+||+|+++|++++ .+|+.++|+.|++||+|.|| +.||+|+++ |++ |..|+++|++.||
T Consensus 211 ~~g~~~le~~I~~e~sG~~~~~L~~~v~~~~~~~~~~A~~L~~am~g~GTd~~Liriivs~~r~e--l~~Ik~~Y~~~yg 288 (337)
T 3chj_A 211 KYNGDSLRAGVEDEFQGLDEYAFKLAHDFLYDPCCAAAFSMNVAFAGSGSDSNRLNRITAMHFRE--CKGCKYYYKKVYG 288 (337)
T ss_dssp HTTTCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHTTT--CTTHHHHHHHHHS
T ss_pred HhCCCCHHHHHHHhcCchHHHHHHHHHHhhcChHHHHHHHHHHHhcCCCchhhHhhhhhccchhh--HHHHHHHHHHHhC
Confidence 377 99999999999999999998874 69999999999999999999 999999999 998 9999999999999
Q ss_pred CCHHHHHhhccccccchh--hhccccc
Q 034049 74 VHLEDDIKRHTSGDHEKV--EYVSLLF 98 (105)
Q Consensus 74 ~~L~~~I~~~~sG~~~~~--aL~~~~~ 98 (105)
++|.++|++++||||+++ +||++..
T Consensus 289 ~sL~~~I~~etsGdy~~~LlaL~~~~~ 315 (337)
T 3chj_A 289 QAFDERCATELKGVYGDAIKLLWEPVT 315 (337)
T ss_dssp SCHHHHHHHHCCHHHHHHHHHHTSCCC
T ss_pred CcHHHHHHhhCChHHHHHHHHHhCCCC
Confidence 999999999999999999 9998753
No 23
>4evf_A Alpha-1 giardin, giardin subunit alpha-1; annexin, calcium-binding protein, membrane-binding protein, binding protein; 1.90A {Giardia intestinalis} PDB: 4evh_A
Probab=99.89 E-value=1.7e-23 Score=148.85 Aligned_cols=97 Identities=10% Similarity=0.149 Sum_probs=90.5
Q ss_pred CccchHHHHHhhhc--chhHHHHHHHHcc-------CCHHHHHHHHHHHHcCCCh--HHHHHHHhhCCHHHHHHHHHHHH
Q 034049 1 MYSEDLCKRLSSEL--SGKLEMAVLLWMH-------DPAGRDAVVVRNSLTTGNL--KAATEVICSRTPSQIQLIRQHYH 69 (105)
Q Consensus 1 ~y~~~L~~~l~~e~--sg~~~~~l~~~~~-------~~~~~dA~~L~~A~~g~gt--~~li~il~~rs~~~l~~i~~~Y~ 69 (105)
+||++|+++|++++ ||+|+++|++|++ +++.+||+.|++|++| | ..+++|+++||+.||+.|+++|+
T Consensus 117 ~y~~~Le~di~~e~~~sG~~~~~L~~ll~~~r~e~~~~~~~dA~~L~~A~~~--tde~~li~Il~tRs~~~L~~i~~~Y~ 194 (295)
T 4evf_A 117 MFKKPLVEDFMKDVGRKEDWCLLMEKWMAHERVSRPGSPEDEAQRLDQAFDQ--KNTAYLIDFFGTVPSAEYRPIAEAFK 194 (295)
T ss_dssp HHSSCHHHHHHHHHCSSSHHHHHHHHHHHTCCCCCSSCHHHHHHHHHHHHHT--TCHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hccccHHHHHHhhcccCCcHHHHHHHHHhcccccCchHHHHHHHHHHHhccC--CCHHHHhHHHHcCCHHHHHHHHHHHH
Confidence 48999999999999 9999999999985 5789999999999999 6 89999999999999999999999
Q ss_pred HhcCCCHHHHHhhccccccchh--hhcccccc
Q 034049 70 SKFGVHLEDDIKRHTSGDHEKV--EYVSLLFY 99 (105)
Q Consensus 70 ~~yg~~L~~~I~~~~sG~~~~~--aL~~~~~~ 99 (105)
+.||++|+++|++++||+|+++ +++.+.++
T Consensus 195 ~~~g~~L~~~I~~e~sGd~~~~Ll~iv~~~~~ 226 (295)
T 4evf_A 195 AQNGKSIEQAIATIYTKTDYYTFYCAHFALLG 226 (295)
T ss_dssp HHSSSCHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_pred HHhCCCHHHHHHHHcChHHHHHHHHHHHHhCC
Confidence 9999999999999999999999 77766543
No 24
>2ii2_A Alpha-11 giardin; helix-turn-helix, metal binding protein; 1.10A {Giardia intestinalis} PDB: 2iic_A
Probab=99.89 E-value=1.5e-23 Score=150.00 Aligned_cols=98 Identities=13% Similarity=0.179 Sum_probs=92.1
Q ss_pred CccchHHHHHhhhcch--hHHHHHHHHcc------CCHHHHHHHHHHHHcC-CCh--HHHHHHHhhCCHHHHHHHHHHHH
Q 034049 1 MYSEDLCKRLSSELSG--KLEMAVLLWMH------DPAGRDAVVVRNSLTT-GNL--KAATEVICSRTPSQIQLIRQHYH 69 (105)
Q Consensus 1 ~y~~~L~~~l~~e~sg--~~~~~l~~~~~------~~~~~dA~~L~~A~~g-~gt--~~li~il~~rs~~~l~~i~~~Y~ 69 (105)
+||++|+++|++++|| +|+++|++|+. +++..||..|++|++| +|| .++++||++||+.||+.|+++|+
T Consensus 119 ~y~~~Le~di~~e~sg~~~~~~ll~~ll~~~R~e~~~a~~DA~~L~~A~~~~~Gtde~~~i~Il~~Rs~~~L~~i~~~Y~ 198 (310)
T 2ii2_A 119 KTGNDLLQDFVDQIPLTSAASYLCHLAIRENRTPRGSVASDAEVLKHNLIDADEPDHEAVVRLIITSTADEYKEINHRFE 198 (310)
T ss_dssp HHSSCHHHHHHHHCCSCSHHHHHHHHHHHCCCCCCSCHHHHHHHHHHHHTTSSSCCHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHCcCHHHHHHhhcCCchHHHHHHHHHHhccCCcchHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4899999999999999 99999999986 7799999999999998 898 78999999999999999999999
Q ss_pred HhcCCCHHHHHhhcc-ccccchh--hhccccc
Q 034049 70 SKFGVHLEDDIKRHT-SGDHEKV--EYVSLLF 98 (105)
Q Consensus 70 ~~yg~~L~~~I~~~~-sG~~~~~--aL~~~~~ 98 (105)
+.||++|+++|++++ ||+|+++ +++.+.+
T Consensus 199 ~~~g~~l~~~I~~e~~sG~~~~~Ll~iv~~~~ 230 (310)
T 2ii2_A 199 VLTGKSVQEAIETRYADKENARGLCIAHYYNL 230 (310)
T ss_dssp HHHSSCHHHHHHHHCCSHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHhcCccHHHHHHHHHHHhC
Confidence 999999999999999 9999999 7776654
No 25
>1r4t_A Exoenzyme S; EXOS, GAP, toxin, virulence factor, signal transduction; NMR {Pseudomonas aeruginosa}
Probab=55.01 E-value=11 Score=23.82 Aligned_cols=83 Identities=18% Similarity=0.153 Sum_probs=48.6
Q ss_pred chHHHHHhhhcc--hhHHHHHHHH---ccCCH----HHHHHHHHH-HHcC-----CCh--HHHHHHHhhCCHHHHHHHHH
Q 034049 4 EDLCKRLSSELS--GKLEMAVLLW---MHDPA----GRDAVVVRN-SLTT-----GNL--KAATEVICSRTPSQIQLIRQ 66 (105)
Q Consensus 4 ~~L~~~l~~e~s--g~~~~~l~~~---~~~~~----~~dA~~L~~-A~~g-----~gt--~~li~il~~rs~~~l~~i~~ 66 (105)
..|.+....--+ |.+++++.++ ...+. ...|..|.+ -+-| ||| ....+.+.+-+++++.++..
T Consensus 37 e~L~knh~~LATGNG~LRSL~TaLqgI~~gs~~~~~~~~A~~LL~~~IggipfqQWGT~GG~~~~~v~~AS~e~L~ea~~ 116 (153)
T 1r4t_A 37 EGLAREHSRLASGDGALRSLSTALAGIRAGSQVEESRIQAGRLLERSIGGIALQQWGTTGGAASQLVLDASPELRREITD 116 (153)
T ss_dssp HHHHTHHHHHTSTTCHHHHHHHHHHHHHTTCSSHHHHHHHHHHHTSEETTEEGGGTTSSSSHHHHHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCchHHHHHHHHHHHHhccchHHHHHHHHHHHhccccCccHHHhhccccHHHHHHHhcCHHHHHHHHH
Confidence 344444444334 4588887666 22222 223444433 2333 899 88889999999999999887
Q ss_pred HHHHhcCC--CHHHHHhhcccc
Q 034049 67 HYHSKFGV--HLEDDIKRHTSG 86 (105)
Q Consensus 67 ~Y~~~yg~--~L~~~I~~~~sG 86 (105)
.-+...++ .|...++++..|
T Consensus 117 ~lh~vm~eva~l~~ave~evag 138 (153)
T 1r4t_A 117 QLHQVMSEVALLRQAVESEVSR 138 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 66554442 233555555544
No 26
>1he1_A Exoenzyme S, EXOS; signaling protein, signalling complex, EXOS, RAC, pseudomonas aeruginosa, GAP, virulence factor; HET: GDP; 2.0A {Pseudomonas aeruginosa} SCOP: a.24.11.1 PDB: 1he9_A
Probab=51.42 E-value=17 Score=22.46 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=42.8
Q ss_pred cchHHHHHhhhcc--hhHHHHHHHH---cc---CCH-HHHHHHHHH-HHcC-----CCh--HHHHHHHhhCCHHHHHHHH
Q 034049 3 SEDLCKRLSSELS--GKLEMAVLLW---MH---DPA-GRDAVVVRN-SLTT-----GNL--KAATEVICSRTPSQIQLIR 65 (105)
Q Consensus 3 ~~~L~~~l~~e~s--g~~~~~l~~~---~~---~~~-~~dA~~L~~-A~~g-----~gt--~~li~il~~rs~~~l~~i~ 65 (105)
|..|.+....--+ |.+++++.++ .. .+. ...|..|-+ -+-| ||| ....+.+.+-+++++.++.
T Consensus 34 ~e~L~knh~~LAtGNG~LRSL~TaLqgi~~gs~~~~~~~~A~~LL~~~IggipfqQWGT~GG~~~~~v~~As~e~L~ea~ 113 (135)
T 1he1_A 34 PEGLAREHSRLASGDGALRSLSTALAGIRAGSQVEESRIQAGRLLERSIGGIALQQWGTTGGAASQLVLDASPELRREIT 113 (135)
T ss_dssp HHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHTCEETTEEHHHHTCSSSHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHhccchHHHHHHHHHHHhccccCccHHHhhccccHHHHHHHhcCHHHHHHHH
Confidence 3444444444334 5588887666 11 111 223444433 3333 788 7888999999999999988
Q ss_pred HHHHHhcC
Q 034049 66 QHYHSKFG 73 (105)
Q Consensus 66 ~~Y~~~yg 73 (105)
..-+...+
T Consensus 114 ~~lh~vm~ 121 (135)
T 1he1_A 114 DQLHQVMS 121 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 76665544
No 27
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=45.37 E-value=13 Score=22.04 Aligned_cols=26 Identities=31% Similarity=0.545 Sum_probs=19.7
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHhcC
Q 034049 47 KAATEVICSRTPSQIQLIRQHYHSKFG 73 (105)
Q Consensus 47 ~~li~il~~rs~~~l~~i~~~Y~~~yg 73 (105)
-....+|..|+-.++..|++.|+ +||
T Consensus 76 IKa~kvL~~rns~DI~~ire~fq-KYG 101 (101)
T 4aj5_1 76 IKATKVLMEKNSMDIMKIREYFQ-KYG 101 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HC-
T ss_pred HHHHHHHHHHhHHHHHHHHHHHH-HcC
Confidence 34567888899999999999764 454
No 28
>3frr_A Uncharacterized protein KIAA0174; ESCRT, ESCRT-III, CHMP, IST1, alternative splicing, phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3frs_A
Probab=41.71 E-value=20 Score=23.57 Aligned_cols=40 Identities=10% Similarity=0.336 Sum_probs=30.9
Q ss_pred HHHHHHHhh--C--CH-HHHHHHHHHHHHhcCCCHHHHHhhcccc
Q 034049 47 KAATEVICS--R--TP-SQIQLIRQHYHSKFGVHLEDDIKRHTSG 86 (105)
Q Consensus 47 ~~li~il~~--r--s~-~~l~~i~~~Y~~~yg~~L~~~I~~~~sG 86 (105)
+++..|+-. | ++ +|+..|++.|..+||+++.......-.|
T Consensus 100 EAvsslIyAa~R~~~elpEL~~ir~~l~~KyGkeF~~~a~e~~~~ 144 (191)
T 3frr_A 100 ESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIG 144 (191)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCHHHHHHHHTTTTS
T ss_pred HHHHHHHHhhhcccccChHHHHHHHHHHHHhCHHHHHHHHHcCCC
Confidence 666666643 3 33 7999999999999999999887766555
No 29
>1mty_G Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.23.3.1 PDB: 1mmo_G 1xmg_E 1xmf_E 1xmh_E 1xvb_E 1fyz_E 1fz0_E 1fz2_E 1fz3_E 1fz4_E 1fz5_E 1fz6_E 1fz7_E 1fz8_E 1fz9_E 1fzh_E 1fzi_E 1xu3_E 1xu5_E 1fz1_E ...
Probab=37.26 E-value=30 Score=21.98 Aligned_cols=53 Identities=4% Similarity=0.029 Sum_probs=38.2
Q ss_pred HHccCCHHHHHHHHHHHHcCCCh-----HHHHHHHhhCCHHHHHHHHHHHHHhcCCCH
Q 034049 24 LWMHDPAGRDAVVVRNSLTTGNL-----KAATEVICSRTPSQIQLIRQHYHSKFGVHL 76 (105)
Q Consensus 24 ~~~~~~~~~dA~~L~~A~~g~gt-----~~li~il~~rs~~~l~~i~~~Y~~~yg~~L 76 (105)
+.+......++..++++..|... +.+-.+-..-+.-+++.|.-.|.+.|+-++
T Consensus 62 avLk~~~~~d~~ll~k~~~G~da~~V~~~~~ak~~a~~d~yEaErI~i~FR~~~KPPv 119 (162)
T 1mty_G 62 AVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPI 119 (162)
T ss_dssp HHHHHHHSCHHHHHHBCTTSCBHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHhhccHHHHHHhcccCcCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcCCCC
Confidence 33444455678888888888766 445555566888999999999998886543
No 30
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=35.21 E-value=49 Score=17.04 Aligned_cols=36 Identities=11% Similarity=0.210 Sum_probs=21.7
Q ss_pred HHHHHHHHcCCCh------HHHHHHHhhCCHHHHHHHHHHHHHhc
Q 034049 34 AVVVRNSLTTGNL------KAATEVICSRTPSQIQLIRQHYHSKF 72 (105)
Q Consensus 34 A~~L~~A~~g~gt------~~li~il~~rs~~~l~~i~~~Y~~~y 72 (105)
|..|-+.+...|. .+|.++|-+ +-..+|++.|+..|
T Consensus 12 aiELle~lq~sgevp~~KL~aLq~VLqS---dF~~aVREVYEhvy 53 (53)
T 1zl8_A 12 ILELMEHVQKTGEVNNAKLASLQQVLQS---EFFGAVREVYETVY 53 (53)
T ss_dssp HHHHHHHHGGGSSSTHHHHHHHHHHHSC---SHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHH---HHHHHHHHHHHHcC
Confidence 3444444554443 667777744 45677888887654
No 31
>1mhy_G Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.23.3.1 PDB: 1mhz_G
Probab=35.18 E-value=31 Score=22.06 Aligned_cols=53 Identities=6% Similarity=0.059 Sum_probs=37.8
Q ss_pred HHccCCHHHHHHHHHHHHcCCCh-----HHHHHHHhhCCHHHHHHHHHHHHHhcCCCH
Q 034049 24 LWMHDPAGRDAVVVRNSLTTGNL-----KAATEVICSRTPSQIQLIRQHYHSKFGVHL 76 (105)
Q Consensus 24 ~~~~~~~~~dA~~L~~A~~g~gt-----~~li~il~~rs~~~l~~i~~~Y~~~yg~~L 76 (105)
+.+......++..+.++..|... +.+-.+-..-+.-+++.|.-.|.+.|+-++
T Consensus 66 avLk~~~~~d~~ll~k~~~G~da~~V~~~~~ak~~a~~d~yEaErI~i~FR~~~KPPv 123 (169)
T 1mhy_G 66 SVLKTEKLPVADLITKATTGEDAAAVEATWIAKIKAAKSKYEAEAIHIEFRQLYKPPV 123 (169)
T ss_dssp HHHHHHHSCHHHHHHBCTTSCBHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHhhhccHHHHHHhcccCcCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcCCCC
Confidence 33444455678888888888766 445555555888999999999998876543
No 32
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=34.63 E-value=20 Score=24.92 Aligned_cols=30 Identities=10% Similarity=0.283 Sum_probs=24.0
Q ss_pred HHHHHHHHhcCCCHHHHHhhccccccchhhh
Q 034049 63 LIRQHYHSKFGVHLEDDIKRHTSGDHEKVEY 93 (105)
Q Consensus 63 ~i~~~Y~~~yg~~L~~~I~~~~sG~~~~~aL 93 (105)
.+++.|+.-||.+|.+.+...+.| |+++.+
T Consensus 307 ~~~efy~~f~~~~l~~~~~~~~~~-~~~~~~ 336 (346)
T 2etv_A 307 XADEIYEFLLGXRVYGEMAEQFGG-FGXIDL 336 (346)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHCC-SEEECT
T ss_pred HHHHHHHHHcCCCccHHHHHhcCC-ceeEEe
Confidence 457788889999999999887654 988843
No 33
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=34.61 E-value=62 Score=21.76 Aligned_cols=68 Identities=12% Similarity=0.129 Sum_probs=42.9
Q ss_pred hHHHHHHHHccCC---HHHHHHHHHHHHcCCCh----HHHHHHHhh--CCHHHHHHHHHHHHHhcCCCHHHHHhhcc
Q 034049 17 KLEMAVLLWMHDP---AGRDAVVVRNSLTTGNL----KAATEVICS--RTPSQIQLIRQHYHSKFGVHLEDDIKRHT 84 (105)
Q Consensus 17 ~~~~~l~~~~~~~---~~~dA~~L~~A~~g~gt----~~li~il~~--rs~~~l~~i~~~Y~~~yg~~L~~~I~~~~ 84 (105)
.+.+++.++.... .+-.++.-..|..+.|+ .+|++|--. +-+.+++.+.++|....-.+|+.-|..+.
T Consensus 38 ~Y~kAl~a~~~A~~~y~dA~~Kige~A~~S~~skeLG~vL~qis~~hR~i~~~le~~~k~f~~elI~pLE~k~e~D~ 114 (222)
T 3ok8_A 38 NYLRAFHALSEAAEVYFSAIQKIGEQALQSSTSQILGEILVQMSDTQRHLNSDLEVVVQTFHGDLLQHMEKNTKLDM 114 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555553322 22234555566666665 778877655 55688888888888887777777766443
No 34
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=34.56 E-value=31 Score=19.53 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=20.9
Q ss_pred hhcchhHHHHHHHHcc-----CCHHHHHHHHHHHHcCCCh
Q 034049 12 SELSGKLEMAVLLWMH-----DPAGRDAVVVRNSLTTGNL 46 (105)
Q Consensus 12 ~e~sg~~~~~l~~~~~-----~~~~~dA~~L~~A~~g~gt 46 (105)
+|-.||.++.++.++. ......|..|..-|.|.|.
T Consensus 53 kEegGDvksvCltLfLlalRa~NeHrqAdELeA~mqgrg~ 92 (96)
T 3gna_A 53 KEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGS 92 (96)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHTTCHHHHHHHHHHCC----
T ss_pred HhhCCcHHHHHHHHHHHHHHccccccchHHHHHHHcCcCC
Confidence 4557899888777632 3334467788777777664
No 35
>3ks4_A Polymerase cofactor VP35; RNA-binding protein, protein-RNA complex, interferon, HOST cytoplasm, interferon antiviral system evasion; 2.40A {Reston ebolavirus} PDB: 3ks8_A
Probab=29.41 E-value=45 Score=21.33 Aligned_cols=55 Identities=13% Similarity=0.170 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHcCCCh--HHHHHHHh--hCCHHHHHHHHHHHHHh--cCCCHHHHHhhc
Q 034049 29 PAGRDAVVVRNSLTTGNL--KAATEVIC--SRTPSQIQLIRQHYHSK--FGVHLEDDIKRH 83 (105)
Q Consensus 29 ~~~~dA~~L~~A~~g~gt--~~li~il~--~rs~~~l~~i~~~Y~~~--yg~~L~~~I~~~ 83 (105)
.+..++..|+.-+.|.|| --|.+++| ++++..++.|-+.|+.. -|-+-.-+|.+-
T Consensus 64 sakdl~~il~~HLpG~~TaFHqLvqvI~kvgkD~~~Ldi~h~eFqa~LaeGdS~q~AlIqI 124 (184)
T 3ks4_A 64 SAKDLKEIMYDHLPGFGTAFHQLVQVICKIGKDNNLLDTIHAEFQASLADGDSPQCALIQI 124 (184)
T ss_dssp CHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHHHhcCCCcchhHHHH
Confidence 356678888999999998 55556554 58888888888888764 355544444433
No 36
>3ggy_A Increased sodium tolerance protein 1; ESCRT-III like, phosphoprotein, protein transport, endocytosis; 1.70A {Saccharomyces cerevisiae} PDB: 3ggz_A
Probab=28.61 E-value=26 Score=22.99 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=30.6
Q ss_pred HHHHHHHhh--C-CH-HHHHHHHHHHHHhcCCCHHHHHhhcccc
Q 034049 47 KAATEVICS--R-TP-SQIQLIRQHYHSKFGVHLEDDIKRHTSG 86 (105)
Q Consensus 47 ~~li~il~~--r-s~-~~l~~i~~~Y~~~yg~~L~~~I~~~~sG 86 (105)
+++..|+-. | ++ +++..|++.|..+||+++.......-.|
T Consensus 107 EAvsslIyAa~R~~elpEL~~ir~~l~~KyGkeF~~~a~en~~g 150 (193)
T 3ggy_A 107 EAIRSLIYAILFVDEVKELSQLKDLMAWKINVEFVNGVIADHID 150 (193)
T ss_dssp HHHHHHHHHGGGCTTCTTHHHHHHHHHHHTCHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHHHhCHHHHHHHHhcCCC
Confidence 666666543 4 34 8999999999999999999877765455
No 37
>1j2j_B ADP-ribosylation factor binding protein GGA1, ADP-ribosylation factor 1; protein transport; HET: GTP; 1.60A {Homo sapiens} SCOP: a.7.8.1
Probab=27.03 E-value=52 Score=16.43 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=17.5
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHhc
Q 034049 47 KAATEVICSRTPSQIQLIRQHYHSKF 72 (105)
Q Consensus 47 ~~li~il~~rs~~~l~~i~~~Y~~~y 72 (105)
..|.++|-+..|.+++.-....+...
T Consensus 11 k~L~~Ll~s~~P~Dlq~AN~LiK~mv 36 (45)
T 1j2j_B 11 KMLARLLKSSHPEDLRAANKLIKEMV 36 (45)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCChhhHHHHHHHHHHHh
Confidence 56777788888888876655544443
No 38
>2z16_A Matrix protein 1, M1; AIV-7M1, H5N1, structural genomics; 2.02A {Influenza a virus} PDB: 3md2_A 1ea3_A 1aa7_A
Probab=25.74 E-value=81 Score=19.83 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHcCCCh--HHHHHHHhhC---CHHHHHHHHHHH
Q 034049 28 DPAGRDAVVVRNSLTTGNL--KAATEVICSR---TPSQIQLIRQHY 68 (105)
Q Consensus 28 ~~~~~dA~~L~~A~~g~gt--~~li~il~~r---s~~~l~~i~~~Y 68 (105)
++...-|+.|+..+.|..| +++++.|-+| +|.+-..|-..|
T Consensus 26 p~kaeia~~l~~~f~gkntDLealmEWlk~r~~ls~l~k~ilg~~~ 71 (165)
T 2z16_A 26 PLKAEIAQKLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVF 71 (165)
T ss_dssp HHHHHHHHHHHHHHHTSCCCHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHcccccCHHHHHHHHhcCcccchHHhhhhheEE
Confidence 3445678999999999988 8999988874 455555554444
No 39
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=25.29 E-value=1.2e+02 Score=22.67 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=34.0
Q ss_pred HHHHHHcCCCh---HHHHHHHhhCCHHHHHHHHHHHHHhcCCCHHHHHhh
Q 034049 36 VVRNSLTTGNL---KAATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIKR 82 (105)
Q Consensus 36 ~L~~A~~g~gt---~~li~il~~rs~~~l~~i~~~Y~~~yg~~L~~~I~~ 82 (105)
.+.+.++++|. +++.+.+...++.++..-...|.+..|.++.|.|+.
T Consensus 141 ~~~~~~~~~gr~lr~av~~wy~~~~~~~la~ql~ky~~~~~~~~~D~lrl 190 (535)
T 2nvo_A 141 AFADALGGWGRLTRRGVANVYETADVDKLALWAVKYKARDGWSQADALRK 190 (535)
T ss_dssp HHHTTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHCSEETTEEHHHHHHH
T ss_pred HHHHHhcccchHHHHHHHHHHhcCChHHHHHHHHHhcccCCCcHHHHHHh
Confidence 33455566766 788888888888777777777777777788777763
No 40
>3k6g_A Telomeric repeat-binding factor 2-interacting Pro; helix, chromosomal protein, nucleus, phosphoprotein, telomer cycle, DNA-binding, protein binding; 1.95A {Homo sapiens}
Probab=25.20 E-value=94 Score=18.41 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=24.5
Q ss_pred HHHhcCCCHHHHHh--hccccccchh--hhccccccccccc
Q 034049 68 YHSKFGVHLEDDIK--RHTSGDHEKV--EYVSLLFYLRYCV 104 (105)
Q Consensus 68 Y~~~yg~~L~~~I~--~~~sG~~~~~--aL~~~~~~~~~~~ 104 (105)
....++.+|...-+ -.+||+|+.. -|+.+.|..+|-|
T Consensus 20 lMeef~~DL~sVTqAlLK~SGel~at~~fL~~~~r~dg~Pi 60 (111)
T 3k6g_A 20 LMEKFNLDLSTVTQAFLKNSGELEATSAFLASGQRADGYPI 60 (111)
T ss_dssp HHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHSSCTTSCCC
T ss_pred HHHHHhhhHHHHHHHHHHccccHHHHHHHHhCCCcCCCCcc
Confidence 45577778876544 3568999987 6666666666543
No 41
>3fke_A Polymerase cofactor VP35; RNA binding domain, coiled coil, interferon antiviral system evasion, RNA replication, RNA-binding; 1.40A {Zaire ebolavirus - mayinga} PDB: 3l25_A 3l26_A 3l28_A 3l27_A 3l29_A 3l2a_A
Probab=24.67 E-value=42 Score=20.31 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHcCCCh--HHHHHHHh--hCCHHHHHHHHHHHHHh--cCCCHHHHHh
Q 034049 30 AGRDAVVVRNSLTTGNL--KAATEVIC--SRTPSQIQLIRQHYHSK--FGVHLEDDIK 81 (105)
Q Consensus 30 ~~~dA~~L~~A~~g~gt--~~li~il~--~rs~~~l~~i~~~Y~~~--yg~~L~~~I~ 81 (105)
+.-.++.|+.-+.|.|| --|.++++ ++++..++.+-..|++. -|-+-.-+|.
T Consensus 10 akdl~~il~~hLpG~~TaFH~Lvqvi~kvgkd~~~Ld~~h~~F~~~L~eG~s~q~Ali 67 (129)
T 3fke_A 10 AKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALI 67 (129)
T ss_dssp HHHHHHHHHTTSSSSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHccchhHHHHHHHHHHHHHhcCCCcchhHH
Confidence 34456666667777777 44444443 46666677776666653 2444444443
No 42
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=22.67 E-value=78 Score=21.60 Aligned_cols=27 Identities=22% Similarity=0.396 Sum_probs=21.6
Q ss_pred hCCHHHHHHHHHHHHHhcC------CCHHHHHh
Q 034049 55 SRTPSQIQLIRQHYHSKFG------VHLEDDIK 81 (105)
Q Consensus 55 ~rs~~~l~~i~~~Y~~~yg------~~L~~~I~ 81 (105)
..+++++..++++|+..|. .+|.+++.
T Consensus 230 ~~~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~ 262 (305)
T 3t57_A 230 GFTMSEMKSLRAAYRKIFMSTETVSLSFEERLT 262 (305)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTSSTTCSHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcccccCCCHHHHHH
Confidence 4578999999999999987 45777654
No 43
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.59 E-value=1.3e+02 Score=17.75 Aligned_cols=43 Identities=9% Similarity=0.190 Sum_probs=18.1
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHhcCCCHHHHHh--hccccccchh
Q 034049 49 ATEVICSRTPSQIQLIRQHYHSKFGVHLEDDIK--RHTSGDHEKV 91 (105)
Q Consensus 49 li~il~~rs~~~l~~i~~~Y~~~yg~~L~~~I~--~~~sG~~~~~ 91 (105)
|-+++...++.++..--+.-...+|.+-++++. .++.||...+
T Consensus 27 LAq~i~~~~d~d~eekVk~L~EmtG~seeeAr~AL~~~ngDl~~A 71 (104)
T 1wj7_A 27 LAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRA 71 (104)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHhcCCcccHHHHHHHHHHhhCCCHHHHHHHHHHcCCCHHHH
Confidence 334444434443332223333445555444443 3445555555
No 44
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=21.75 E-value=1.2e+02 Score=19.10 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=16.4
Q ss_pred HHhhhc-chhHHHHHHHHccCCHH
Q 034049 9 RLSSEL-SGKLEMAVLLWMHDPAG 31 (105)
Q Consensus 9 ~l~~e~-sg~~~~~l~~~~~~~~~ 31 (105)
.|++-+ +|++..||...+.+||-
T Consensus 41 qv~~lL~~g~~~~ALk~~L~~pP~ 64 (151)
T 1k8k_G 41 EVDSCLRQGNMTAALQAALKNPPI 64 (151)
T ss_dssp HHHHHHHTTCHHHHHHHHTSSCCS
T ss_pred HHHHHHHCCCHHHHHHHHHhCCCC
Confidence 344433 47999999999887763
No 45
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=20.94 E-value=51 Score=16.55 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=16.7
Q ss_pred chhHHHHHHHHccCCHHHHHHHHHHHH
Q 034049 15 SGKLEMAVLLWMHDPAGRDAVVVRNSL 41 (105)
Q Consensus 15 sg~~~~~l~~~~~~~~~~dA~~L~~A~ 41 (105)
+..|..++.-++++-.. |...||+|-
T Consensus 11 k~Ql~qal~hLiknD~~-Fl~~iHeAY 36 (46)
T 2wx4_A 11 STQFVQAFTYLIQNDKE-FANKLHKAY 36 (46)
T ss_dssp SHHHHHHHHHHHHHCTT-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCHH-HHHHHHHHH
Confidence 34577777777775554 466677763
No 46
>1c94_A Retro-GCN4 leucine zipper; retro-coiled coil, 4-alpha-helix-bundle, peptide synthesis, gene regulation; 2.08A {Synthetic} SCOP: k.11.1.1
Probab=20.76 E-value=30 Score=16.07 Aligned_cols=13 Identities=31% Similarity=0.629 Sum_probs=8.2
Q ss_pred ccchHHHHHhhhc
Q 034049 2 YSEDLCKRLSSEL 14 (105)
Q Consensus 2 y~~~L~~~l~~e~ 14 (105)
|.++|.+.++.|+
T Consensus 20 ynkslleevkdel 32 (38)
T 1c94_A 20 YNKSLLEEVKDEL 32 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 5566666666654
Done!