BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034055
MNEISRYRSFQFLLLISSICLQFIPAISDDPSSTKKGKQSAAHHTSRGNTGAKVGIVLLG
LVAVGLFSFFLFKLWQKKKREEQYARLLKLFEEDDELEVELGLRD

High Scoring Gene Products

Symbol, full name Information P value
AT1G09645 protein from Arabidopsis thaliana 2.9e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034055
        (105 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956278 - symbol:AT1G09645 "AT1G09645" speci...   117  2.9e-07   1


>TAIR|locus:504956278 [details] [associations]
            symbol:AT1G09645 "AT1G09645" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:BT014936
            EMBL:BT015159 EMBL:AK221824 IPI:IPI00528435 RefSeq:NP_683291.2
            UniGene:At.49573 EnsemblPlants:AT1G09645.1 GeneID:837492
            KEGG:ath:AT1G09645 TAIR:At1g09645 eggNOG:NOG279198
            HOGENOM:HOG000241447 InParanoid:Q6GKX8 OMA:SKNTNAG PhylomeDB:Q6GKX8
            ProtClustDB:CLSN2681234 Genevestigator:Q6GKX8 Uniprot:Q6GKX8
        Length = 106

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 29/78 (37%), Positives = 38/78 (48%)

Query:     9 SFQFLLLISSICLQFIPAISDDPSSTKKGKQSAAHHTSRGNTXXXXXXXXXXXXXXXXXX 68
             S++ LL  +SI LQF   +S D  +T  G ++ +H TS   T                  
Sbjct:    11 SWRRLLFFASIGLQFFLGLSGDSKNTNAGVKTESH-TSSSKTGTKVILVLVGFVAVAMFS 69

Query:    69 XXXXKLWQKKKREEQYAR 86
                 KLWQKKKR+EQYAR
Sbjct:    70 FFLYKLWQKKKRDEQYAR 87


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.127   0.367    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      105        64   0.00091  102 3  11 22  0.39    28
                                                     29  0.44    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  522 (56 KB)
  Total size of DFA:  95 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.31u 0.12s 7.43t   Elapsed:  00:00:00
  Total cpu time:  7.31u 0.12s 7.43t   Elapsed:  00:00:00
  Start:  Fri May 10 13:16:18 2013   End:  Fri May 10 13:16:18 2013

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